#chr start end strand type transposon gene id transcript id sample chr10 10110715 10110762 + Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000109160.2, 4930598N05Rik ENSMUST00000207733.2, ENSMUST00000207048.2, ENSMUST00000207631.2, ENSMUST00000208693.2, ENSMUST00000207288.2, NR_166112.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 102148629 102148630 + Predicted LINE|L1|Lx6 ENSMUSG00000019888.17, Mgat4c SRR2089610, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089634 chr10 102161832 102161859 + Predicted LINE|L1|L1MdTf_III ENSMUSG00000019888.17, Mgat4c SRR2089603, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089610, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089638, SRR2089639, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr10 102210296 102210299 + Annotated LTR|ERV1|RLTR1A2_MM ENSMUSG00000019888.17, Mgat4c ENSMUST00000120748.2, NM_026243.4 ENCFF001NEC, ENCFF033ZUH, ENCFF115LWP, ENCFF284AEN, ENCFF339MSB, ENCFF442FJC, ENCFF521NCL, ENCFF573UIH, ENCFF694NRG, ENCFF728TXU, ENCFF754TOT, ENCFF826RUZ, ENCFF845NXM, ENCFF854KNE, ENCFF862FYE, ENCFF912MUD, ENCFF933MOZ, ENCFF943XKB, ENCFF975NCY chr10 102351257 102351258 + Predicted LINE|L2|L2b ENSMUSG00000044921.6, Rassf9 SRR2089636, SRR2089639, SRR2089640 chr10 103822854 103822855 + Annotated LTR|ERVK|RMER17B2 ENSMUSG00000112281.2, Gm47226 ENSMUST00000218778.2 chr10 104020489 104020490 + Predicted LINE|L1|L1MdA_VII ENSMUSG00000095022.10, Gm20765 SRR2089607, SRR2089635, SRR2089636, SRR2089638, SRR2089651 chr10 107041434 107041435 - Annotated LTR|ERVL|LTR33B ENSMUSG00000112466.2, Gm29674 ENSMUST00000219664.2 chr10 110728962 110728963 - Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000101801.7, 1700020G17Rik SRR3178204, SRR6904684, SRR6904685 chr10 110732348 110732411 - Annotated LTR|ERVL-MaLR|MLT1G1 ENSMUSG00000101801.7, 1700020G17Rik ENSMUST00000188776.7, ENSMUST00000191429.7, ENSMUST00000191286.2, ENSMUST00000190237.2, NR_045979.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 111004607 111004608 + Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000020189.16, Osbpl8 SRR2089603, SRR2089604, SRR2089605, SRR2089620, SRR2089622, SRR2089623, SRR2089634, SRR2089636, SRR2089637, SRR2089647, SRR2089648, SRR2089650, SRR2089651 chr10 111077561 111077562 + Predicted LINE|L1|Lx4A ENSMUSG00000020189.16, Osbpl8 ENCFF088PZI, ENCFF121IDD, ENCFF229CPV, ENCFF332RWQ, ENCFF338DAA, ENCFF497NJW, ENCFF515GXB, ENCFF578YPJ, ENCFF587HBC, ENCFF647KBV, ENCFF712EKU, ENCFF726YTS, ENCFF754VQW, ENCFF757JMT, ENCFF834TET, ENCFF948YKH, ENCFF971DTR, ENCFF974KKD chr10 111327949 111327950 + Predicted DNA|hAT-Tip100|MamTip2b ENSMUSG00000058799.17, Nap1l1 ENCFF048FGD, ENCFF051JGE, ENCFF089WMB, ENCFF143PHU, ENCFF502ANK, ENCFF570KYE, ENCFF888LGA, ENCFF197OUM, ENCFF302KQL, ENCFF310HAL, ENCFF334XFS, ENCFF383AJS, ENCFF407JTK, ENCFF538AIM, ENCFF689ZLL, ENCFF894SHM, SRR5643190, SRR6904683, SRR6904684, SRR6904685 chr10 111833067 111833169 - Annotated SINE|ID|ID4 ENSMUSG00000056888.12, Glipr1 ENSMUST00000074805.12, NM_028608.3 ENCFF001NDA, ENCFF001NDD, ENCFF001RTD, ENCFF001RTN, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002FAC, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF040EEJ, ENCFF043JGD, ENCFF048FGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF056GXQ, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF076CCZ, ENCFF083BIG, ENCFF083CUR, ENCFF084PUC, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF106GQS, ENCFF107XGE, ENCFF108UNS, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF136POG, ENCFF138QRF, ENCFF140VGY, ENCFF143PHU, ENCFF147GLI, ENCFF151QHP, ENCFF162UVS, ENCFF163LPQ, ENCFF168WHQ, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF198RBJ, ENCFF206EGD, ENCFF207OVG, ENCFF212JFB, ENCFF212ZXS, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF251TMY, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF313ERY, ENCFF321BMO, ENCFF322VJD, ENCFF327MSM, ENCFF330LWU, ENCFF332ZPO, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF347HAB, ENCFF347UAC, ENCFF348VIH, ENCFF351JWR, ENCFF358UFZ, ENCFF363XWU, ENCFF366BBB, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF381JXP, ENCFF385MVU, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF400XLQ, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF415KCJ, ENCFF421ACV, ENCFF421SNO, ENCFF422ATU, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF450WAV, ENCFF453XOG, ENCFF462ABU, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF491XRO, ENCFF497YRP, ENCFF502ANK, ENCFF504ULZ, ENCFF519IZA, ENCFF521UGJ, ENCFF524EDD, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF544BEF, ENCFF548SLN, ENCFF552DRF, ENCFF552NWL, ENCFF554PUC, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570GTP, ENCFF575RUC, ENCFF581WWO, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF608NVM, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF643VPC, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670YKO, ENCFF671ERF, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF711WAC, ENCFF723KAG, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764TGO, ENCFF771LLL, ENCFF775RSS, ENCFF780TUN, ENCFF783MLO, ENCFF784LWT, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793IYH, ENCFF795DLS, ENCFF808XFI, ENCFF813GGJ, ENCFF823PZU, ENCFF836JVX, ENCFF844QDN, ENCFF849GVQ, ENCFF858CRT, ENCFF863RVB, ENCFF865WQE, ENCFF868XLZ, ENCFF880FYC, ENCFF881UBL, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF907HVO, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931HCN, ENCFF933UPG, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF941QCZ, ENCFF942WIP, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF972IVS, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF013HYW, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF274ESJ, ENCFF345BBC, ENCFF359GCY, ENCFF532UKS, ENCFF533DWD, ENCFF712DGP, ENCFF912MUD, ENCFF933KQV, ENCFF935LAF, ENCFF945ICZ, ENCFF970VKB, ENCFF002SZY, ENCFF002ZAX, ENCFF004AEL, ENCFF006JHA, ENCFF008YSM, ENCFF009AON, ENCFF009AVK, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF028XDY, ENCFF033DWC, ENCFF037IZV, ENCFF039DES, ENCFF039PJR, ENCFF041PJP, ENCFF043DTH, ENCFF046HWP, ENCFF047LTH, ENCFF049WBL, ENCFF050CMF, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057MDU, ENCFF060FGD, ENCFF064VAD, ENCFF065UBR, ENCFF068CQU, ENCFF068KDU, ENCFF070YMI, ENCFF077CYB, ENCFF077YZF, ENCFF080BTV, ENCFF080DNG, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF089SWU, ENCFF094RHV, ENCFF095NMU, ENCFF098AYQ, ENCFF098TCZ, ENCFF103SQR, ENCFF106RLX, ENCFF116DGU, ENCFF116QKZ, ENCFF118PQI, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF131VEF, ENCFF134VWD, ENCFF136DUH, ENCFF137OYQ, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF151XBP, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF167GWU, ENCFF170KWW, ENCFF172DMS, ENCFF174EGP, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF184ALY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF194DAO, ENCFF197JAP, ENCFF197OUM, ENCFF197TJB, ENCFF198XFF, ENCFF203EWG, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF221ZQB, ENCFF229TCX, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF249LSC, ENCFF255XDN, ENCFF258WLS, ENCFF260UQJ, ENCFF264PYB, ENCFF268YSJ, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF273CBP, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF291SCS, ENCFF292KWK, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF305GPD, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF313IFI, ENCFF315HBU, ENCFF316EEH, ENCFF319YFJ, ENCFF321NRW, ENCFF324ITL, ENCFF328TJH, ENCFF332RWQ, ENCFF335UNU, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346UBA, ENCFF347EUO, ENCFF348RRM, ENCFF358UHV, ENCFF363PDR, ENCFF369VAI, ENCFF370VOV, ENCFF371ZDG, ENCFF374VAZ, ENCFF377OQI, ENCFF380BYT, ENCFF380LXU, ENCFF386XTQ, ENCFF390AUP, ENCFF390ZZH, ENCFF394AUR, ENCFF399TOF, ENCFF403CRC, ENCFF403RPK, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411YXB, ENCFF414IHO, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426FAF, ENCFF426ZCK, ENCFF427YDU, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437ZSM, ENCFF439BEV, ENCFF439HXQ, ENCFF450CUC, ENCFF453MPR, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF460VXC, ENCFF466RIS, ENCFF468RDR, ENCFF469JWF, ENCFF470RDW, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF486GBM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF504PGI, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF515GXB, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF529LEZ, ENCFF530DUT, ENCFF531JWM, ENCFF536ZFC, ENCFF536ZVF, ENCFF537DSI, ENCFF538AIM, ENCFF538TFM, ENCFF541HSQ, ENCFF543GNI, ENCFF543PXT, ENCFF548JDU, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF558UDY, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF565FFU, ENCFF569ELL, ENCFF572JDP, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578YPJ, ENCFF585CYT, ENCFF587HBC, ENCFF588JAU, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF596PMK, ENCFF598BFX, ENCFF598LJF, ENCFF598WAL, ENCFF601JTS, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF618SIR, ENCFF620FXM, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637CVI, ENCFF637GVH, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF657NUT, ENCFF658NHH, ENCFF661TOM, ENCFF661UPO, ENCFF663TDQ, ENCFF667RGF, ENCFF668SQN, ENCFF672WYO, ENCFF673BPE, ENCFF673ZDG, ENCFF680OWA, ENCFF680WIN, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF687STH, ENCFF689RQK, ENCFF689UNV, ENCFF689ZLL, ENCFF691DJE, ENCFF693POR, ENCFF694EPZ, ENCFF695XIY, ENCFF696QTS, ENCFF696VQM, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF706BUS, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727JTZ, ENCFF735BVR, ENCFF740TFX, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF746ZCS, ENCFF753HNF, ENCFF757JMT, ENCFF758IOS, ENCFF759HJA, ENCFF759WDO, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF770WIT, ENCFF772QLP, ENCFF779MMO, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF782CNW, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF798TFC, ENCFF803ZUN, ENCFF804EWD, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812QQI, ENCFF814TTQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF821HAZ, ENCFF829WND, ENCFF830CBI, ENCFF832FTK, ENCFF834TET, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF886UAF, ENCFF894COY, ENCFF894SHM, ENCFF896XAZ, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF900LFN, ENCFF901KUE, ENCFF903KDM, ENCFF903ULI, ENCFF904KCQ, ENCFF908MGO, ENCFF910CTW, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF930JCE, ENCFF931NMQ, ENCFF934VFW, ENCFF935ZEM, ENCFF936DQW, ENCFF936LNA, ENCFF938CNS, ENCFF938XTE, ENCFF946LMX, ENCFF948BDY, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951PCM, ENCFF952EQQ, ENCFF952FJN, ENCFF952LUC, ENCFF953FGT, ENCFF953WBM, ENCFF956ZKG, ENCFF958BIE, ENCFF958LRX, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF974KKD, ENCFF974XWJ, ENCFF976SMI, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF996AOW, ENCFF998BIQ, ENCFF999ZYF, ENCFF014SLC, ENCFF062GNP, ENCFF186VNL, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF349AIG, ENCFF442OKF, ENCFF477YHR, ENCFF494ZWE, ENCFF499GDC, ENCFF574YMK, ENCFF582WGH, ENCFF653QJY, ENCFF671TUD, ENCFF720MPJ, ENCFF854IBU, ENCFF904RJF chr10 112151245 112151246 + Annotated SINE|MIR|MIR3 ENSMUSG00000035681.8, Kcnc2 ENSMUST00000218445.2 chr10 114710908 114710933 + Annotated LTR|ERVK|RLTR51B_Mm ENSMUSG00000111883.2, Gm31182 ENSMUST00000219061.2 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904684, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 114714263 114714286 + Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000111883.2, Gm31182 DRR091691, DRR091692, DRR091694, DRR091697, DRR091698, SRR10697195, SRR10697198, SRR10697200, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987 chr10 114783702 114783703 + Predicted LINE|L1|Lx8 ENSMUSG00000112016.2, Gm31267 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR13142119, SRR13142120, SRR13142122, SRR15198217, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990 chr10 114783800 114783837 + Annotated LINE|L1|Lx8 ENSMUSG00000112016.2, Gm31267 ENSMUST00000218941.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR10697199, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178979, SRR9178982, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 114783891 114783892 + Predicted LTR|ERVL|RMER15 ENSMUSG00000112016.2, Gm31267 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697199, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR15198217, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178990, SRR9178991, SRR9178992 chr10 114784611 114784612 + Predicted LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000112016.2, Gm31267 SRR11428468, SRR15198217, SRR15198220, SRR15198222, SRR15198226, SRR9178978 chr10 116103920 116103931 + Predicted SINE|Alu|PB1D10 ENSMUSG00000020151.17, Ptprr DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9080662, SRR9080666, SRR9178982 chr10 117013532 117013537 + Predicted LTR|ERVK|RMER17B2 ENSMUSG00000112753.2, 4930423D24Rik ENSMUST00000219785.2 DRR091696, DRR091699, SRR10697197, SRR10697200, SRR10697202, SRR11428470, SRR13142118, SRR13142120, SRR15198219, SRR15198226, SRR15198227, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr10 117014358 117014359 + Predicted LTR|ERVL-MaLR|MLT1F2 ENSMUSG00000112753.2, 4930423D24Rik DRR091691, DRR091693, DRR091698, SRR11428468, SRR11428469, SRR15198221, SRR15198225, SRR15198226, SRR15198228, SRR9080663, SRR9080666, SRR9178986 chr10 117761364 117761393 + Annotated SINE|B2|B3 ENSMUSG00000112500.2, 4933411E08Rik ENSMUST00000217950.2, NR_045342.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178206, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 118725145 118725171 - Predicted LTR|ERVL|ERVL-int ENSMUSG00000028630.10, Dyrk2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 119156075 119156141 + Predicted LTR|ERVK|RLTR16C_MM ENSMUSG00000112155.2, 4930477N07Rik ENSMUST00000218762.2, NR_126086.1, NR_126085.1 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 119688294 119688359 - Annotated LTR|ERVL|RMER15 ENSMUSG00000085418.2, Grip1os1 ENSMUST00000126965.2, NR_131760.1 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643192, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr10 120601932 120601933 - Annotated LTR|ERVL|MT2B1 ENSMUSG00000111907.2, Gm48202 ENSMUST00000219156.2 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR13142118, SRR13142120, SRR15198218, SRR15198220, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198228, SRR2927111, SRR2927112, SRR9178977, SRR9178982, SRR9178991 chr10 120601984 120601985 - Predicted LTR|ERVL|MT2B1 ENSMUSG00000111907.2, Gm48202 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091695, DRR091698, DRR091699, SRR13142118, SRR13142120, SRR15198218, SRR15198220, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198228, SRR2927111, SRR2927112, SRR9178977, SRR9178982, SRR9178991 chr10 121038530 121038581 - Annotated LTR|ERVK|RLTR20A2B_MM ENSMUSG00000112846.2, 4930432O09Rik ENSMUST00000219710.2, NR_152796.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR5643199, SRR6338004, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 121541133 121541134 - Predicted LTR|ERVL-MaLR|ORR1G ENSMUSG00000112526.2, Gm35865 SRR10697200, SRR15198218, SRR15198219, SRR15198222, SRR15198225, SRR15198227, SRR9178979, SRR9178982, SRR9178987 chr10 12237144 12237146 + Predicted LINE|L1|L1MdGf_II ENSMUSG00000065181.3, Gm25139 SRR2089604, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089650 chr10 122403835 122403836 - Predicted LTR|ERVL|MLT2C2 ENSMUSG00000112095.2, Sros1 ENCFF102BWR, ENCFF310HPH, ENCFF993QUE, ENCFF120SMK, ENCFF594GIP chr10 122451803 122451804 + Predicted LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000098522.3, Mir6412 DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091697, DRR091698, SRR11428468, SRR2927113, SRR9178976, SRR9178982, SRR9178992 chr10 122593103 122593104 + Annotated LTR|ERVK|RLTR17D_Mm ENSMUSG00000034613.13, Ppm1h ENSMUST00000160315.2 chr10 12462038 12462039 - Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000019820.12, Utrn DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178986 chr10 125164831 125164832 - Annotated SINE|B4|B4A ENSMUSG00000020102.16, Slc16a7 ENSMUST00000211781.2, NM_011391.2, NM_001358496.1 chr10 126981326 126981327 - Annotated LTR|ERVK|RMER17C ENSMUSG00000120892.1, ENSMUSG00000120892 ENSMUST00000246327.1 chr10 127160192 127160216 + Annotated LTR|ERV1|MLTR14 ENSMUSG00000040345.11, Arhgap9 ENSMUST00000218656.2 ENCFF001RTF, ENCFF001RTJ, ENCFF002DMZ, ENCFF993QUE, ENCFF383AJS chr10 127843447 127843480 - Annotated LTR|ERVL|MLT2B2 ENSMUSG00000025396.8, Hsd17b6 ENSMUST00000219183.2, ENSMUST00000219707.2, ENSMUST00000219953.2, ENSMUST00000219780.2, NM_001359377.1 ENCFF001RTD, ENCFF001RTN, ENCFF223BXU, ENCFF446FOZ, ENCFF608LAL, ENCFF683CWD, ENCFF737OUQ, ENCFF838YLT chr10 128192237 128192238 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000005683.9, Cs ENCFF009AVK, ENCFF039DES, ENCFF065UBR, ENCFF118PQI, ENCFF307OHZ, ENCFF420RGI, ENCFF527XBQ, ENCFF699SBZ, ENCFF910CTW, ENCFF964HGL chr10 128807066 128807067 + Annotated LINE|L1|L1M4 ENSMUSG00000097691.2, 9030616G12Rik ENSMUST00000181142.2, NR_152816.1 ENCFF001RTD, ENCFF001RTN chr10 130145209 130145210 + Predicted LINE|L1|L1MdA_I ENSMUSG00000034833.11, Tespa1 SRR2089604, SRR2089617, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089642, SRR2089644, SRR2089645, SRR2089646 chr10 13804707 13804708 - Annotated LTR|ERVL|ERVL-E-int ENSMUSG00000112494.2, 4930444K16Rik ENSMUST00000220438.2 chr10 18762776 18762777 - Annotated LTR|Gypsy|MamGypsy2-I ENSMUSG00000111318.2, Gm48483 ENSMUST00000214387.2 ENCFF067UCQ, ENCFF134HVE, ENCFF170XMM, ENCFF304DLW, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF686KMX, ENCFF756QCA, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF920FVY, ENCFF160TQC, ENCFF199IWW, ENCFF319SDE, ENCFF423TSB chr10 20396069 20396169 - Predicted LINE|L1|L1MdFanc_II ENSMUSG00000019990.16, Pde7b ENCFF005NBP, ENCFF074HUJ, ENCFF075MGH, ENCFF102AMK, ENCFF120DEX, ENCFF136POG, ENCFF138QRF, ENCFF151QHP, ENCFF168WHQ, ENCFF221JIC, ENCFF221JNS, ENCFF264RIV, ENCFF269UZL, ENCFF277XPM, ENCFF283XKV, ENCFF289WHW, ENCFF304MIZ, ENCFF313ERY, ENCFF319INV, ENCFF330IYN, ENCFF330LWU, ENCFF332ZPO, ENCFF349LIW, ENCFF352VWM, ENCFF367BBB, ENCFF393UZV, ENCFF415KCJ, ENCFF421ACV, ENCFF432ZLQ, ENCFF439OFV, ENCFF460NGS, ENCFF491XRO, ENCFF494YXM, ENCFF519IZA, ENCFF533CLY, ENCFF540XSD, ENCFF552NWL, ENCFF600AGS, ENCFF606EDP, ENCFF608NVM, ENCFF621PKT, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF670YKO, ENCFF672HUA, ENCFF686EWL, ENCFF691URX, ENCFF707QJV, ENCFF710DAI, ENCFF723KAG, ENCFF745HSV, ENCFF783MLO, ENCFF794FBC, ENCFF795DLS, ENCFF823PZU, ENCFF844KCR, ENCFF844QDN, ENCFF876MJS, ENCFF884TJE, ENCFF896MQK, ENCFF907HVO, ENCFF910ESY, ENCFF941QCZ, ENCFF951MOU, ENCFF960LQP, ENCFF985BLV, ENCFF994BOT, ENCFF003GJV, ENCFF006JHA, ENCFF027QGO, ENCFF034WGV, ENCFF052RNG, ENCFF060FGD, ENCFF064VAD, ENCFF068CQU, ENCFF080BTV, ENCFF098AYQ, ENCFF118PQI, ENCFF134PXJ, ENCFF140WZW, ENCFF149JXW, ENCFF151XBP, ENCFF169JOQ, ENCFF177LXI, ENCFF189JVE, ENCFF192XJA, ENCFF219PCN, ENCFF222MKT, ENCFF254VIN, ENCFF261EQP, ENCFF272VMY, ENCFF275TCB, ENCFF285NFL, ENCFF303BIV, ENCFF305GPD, ENCFF310BWG, ENCFF310WDZ, ENCFF319YFJ, ENCFF343MZH, ENCFF347EUO, ENCFF366CSN, ENCFF370VOV, ENCFF386CRY, ENCFF397ZQU, ENCFF403CRC, ENCFF422CQE, ENCFF422ZNC, ENCFF426ZCK, ENCFF427YDU, ENCFF438ROC, ENCFF454DOT, ENCFF460VXC, ENCFF478MHH, ENCFF479WHZ, ENCFF483KXD, ENCFF497KLL, ENCFF505YPK, ENCFF507WIK, ENCFF515GXB, ENCFF516QKR, ENCFF518TUP, ENCFF527XBQ, ENCFF549KAB, ENCFF557JPW, ENCFF558UDY, ENCFF565DII, ENCFF572JDP, ENCFF572SQL, ENCFF578MOR, ENCFF578YPJ, ENCFF585CYT, ENCFF588JAU, ENCFF593TQB, ENCFF603QSQ, ENCFF618SIR, ENCFF637GVH, ENCFF641CYW, ENCFF644EGG, ENCFF647KBV, ENCFF658NHH, ENCFF663TDQ, ENCFF667RGF, ENCFF672WYO, ENCFF673SLO, ENCFF678CRA, ENCFF681EEO, ENCFF687STH, ENCFF696QTS, ENCFF696XZL, ENCFF698XCB, ENCFF706BUS, ENCFF711OYQ, ENCFF724VJN, ENCFF742DJH, ENCFF746ZCS, ENCFF759WDO, ENCFF764AQK, ENCFF791AUB, ENCFF791ZDR, ENCFF798TFC, ENCFF804EWD, ENCFF812LAI, ENCFF825JNK, ENCFF829HAB, ENCFF829WND, ENCFF840EFC, ENCFF847HFJ, ENCFF853PNO, ENCFF859MTL, ENCFF861RRQ, ENCFF863ENS, ENCFF875BUD, ENCFF900LFN, ENCFF907KCF, ENCFF916JWW, ENCFF931NMQ, ENCFF939QLN, ENCFF939UBM, ENCFF948BDY, ENCFF951GZB, ENCFF952EQQ, ENCFF956RCJ, ENCFF964HGL, ENCFF994JUO, ENCFF996AOW, ENCFF998BIQ, DRR091693, SRR2040601 chr10 21295257 21295258 + Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000037535.6, 1700021A07Rik ENSMUST00000188024.2 ENCFF001NEC, SRR10697196, SRR10697198, SRR10697199, SRR10697203, SRR15198217, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178978, SRR9178985 chr10 21295359 21295374 + Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000037535.6, 1700021A07Rik ENSMUST00000187763.3 ENCFF001NEC, DRR091689, DRR091693, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697202, SRR10697203, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178992 chr10 21534316 21534318 + Predicted LINE|L1|Lx8b ENSMUSG00000056716.11, Gm5420 SRR2089603, SRR2089605, SRR2089608, SRR2089611, SRR2089620, SRR2089621, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr10 21534646 21534647 + Predicted LINE|L1|Lx8b ENSMUSG00000056716.11, Gm5420 SRR2089603, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089611, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089649, SRR2089650 chr10 22178379 22178512 - Annotated LTR|ERVL|RMER15 ENSMUSG00000097705.3, Gm26740 ENSMUST00000241300.1, ENSMUST00000243233.1, ENSMUST00000243643.1, ENSMUST00000242772.1, ENSMUST00000244229.1, ENSMUST00000180456.3, ENSMUST00000244261.1, ENSMUST00000243103.1, ENSMUST00000242256.1, ENSMUST00000242563.1, ENSMUST00000241924.1, ENSMUST00000244561.1, ENSMUST00000241205.1, ENSMUST00000242925.1, ENSMUST00000241367.1, ENSMUST00000246115.1, ENSMUST00000243667.1, ENSMUST00000245456.1, ENSMUST00000246613.1, ENSMUST00000246366.1, ENSMUST00000246910.1, ENSMUST00000245186.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF005NBP, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF083BIG, ENCFF083CUR, ENCFF084PUC, ENCFF086ZMV, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF142CUS, ENCFF143PHU, ENCFF147GLI, ENCFF151QHP, ENCFF160HKC, ENCFF162UVS, ENCFF178ZVU, ENCFF179WPT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF229AIZ, ENCFF234MZC, ENCFF251TMY, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF265LKR, ENCFF269UZL, ENCFF273CJD, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF289WHW, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF321BMO, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF332ZPO, ENCFF334RGJ, ENCFF344LNZ, ENCFF345OIF, ENCFF347UAC, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF367BBB, ENCFF371VGE, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF401HCS, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF439OFV, ENCFF449MIK, ENCFF453XOG, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF472YPG, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF491XRO, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF519IZA, ENCFF522VLI, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF534DID, ENCFF535YBP, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564YPB, ENCFF565YHF, ENCFF581WWO, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF605IFN, ENCFF606EDP, ENCFF608NVM, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764TGO, ENCFF764ZUI, ENCFF771LLL, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF787LWL, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793STU, ENCFF794FBC, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CTQ, ENCFF865WQE, ENCFF868XLZ, ENCFF876MJS, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF907HVO, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF931DDH, ENCFF931HCN, ENCFF931PFF, ENCFF934ULS, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF359GCY, ENCFF455DHP, ENCFF609ZVL, ENCFF712DGP, ENCFF935LAF, ENCFF945ICZ, ENCFF970VKB, ENCFF002SZY, ENCFF002ZAX, ENCFF004AEL, ENCFF008YSM, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF014CMK, ENCFF016CHX, ENCFF019PVP, ENCFF022ACG, ENCFF024CUG, ENCFF027GCQ, ENCFF028XDY, ENCFF030IFE, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037IZV, ENCFF037LEJ, ENCFF039DES, ENCFF043DTH, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF060FGD, ENCFF061WTN, ENCFF064VAD, ENCFF065ZIE, ENCFF066MTU, ENCFF068CQU, ENCFF070YMI, ENCFF080BTV, ENCFF083IRL, ENCFF087IUJ, ENCFF087OKI, ENCFF087XKQ, ENCFF089SWU, ENCFF098AYQ, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF116QKZ, ENCFF117ZMM, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF127KHN, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF136DUH, ENCFF136TYP, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF150HVU, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF167GWU, ENCFF172DMS, ENCFF174EGP, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF194DAO, ENCFF197JAP, ENCFF197TJB, ENCFF203EWG, ENCFF207HZS, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF233RGQ, ENCFF235HER, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF242MZE, ENCFF243LBQ, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF257EYD, ENCFF258WLS, ENCFF260UQJ, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF268ZHE, ENCFF271RFU, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF279EVY, ENCFF280LCC, ENCFF286GUQ, ENCFF291SCS, ENCFF292KWK, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF310WDZ, ENCFF313IFI, ENCFF315HBU, ENCFF316EEH, ENCFF319YFJ, ENCFF321NRW, ENCFF332IRR, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF347EUO, ENCFF350KYC, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF366IEQ, ENCFF370VOV, ENCFF371ZDG, ENCFF374VAZ, ENCFF376PQU, ENCFF378TYU, ENCFF380LXU, ENCFF386HCR, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF406LFV, ENCFF406NLL, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF423GTP, ENCFF426ETE, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF439BEV, ENCFF439HXQ, ENCFF450CUC, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF460FON, ENCFF462HZM, ENCFF466RIS, ENCFF468RDR, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478MHH, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF484PQK, ENCFF486GBM, ENCFF490ULA, ENCFF492HRC, ENCFF497KLL, ENCFF498OHV, ENCFF504PGI, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF513BRJ, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF524PAV, ENCFF529LEZ, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZVF, ENCFF537DSI, ENCFF538ZTW, ENCFF543GNI, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF557JPW, ENCFF559QXN, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF569ELL, ENCFF572SQL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581ZWM, ENCFF584OOK, ENCFF585CYT, ENCFF591WVP, ENCFF593TQB, ENCFF596INO, ENCFF596PMK, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF611QZE, ENCFF613YNK, ENCFF615ULR, ENCFF618PVF, ENCFF619SKV, ENCFF620FXM, ENCFF632HDE, ENCFF633QXI, ENCFF635XED, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF643SBQ, ENCFF644EGG, ENCFF646GBS, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF669PMR, ENCFF672WYO, ENCFF673BPE, ENCFF678CRA, ENCFF680OWA, ENCFF680WIN, ENCFF685FUZ, ENCFF687GPO, ENCFF687STH, ENCFF689RQK, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF696TTO, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF699SBZ, ENCFF705CES, ENCFF711XWR, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF741PLM, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF754VQW, ENCFF755REI, ENCFF758BKM, ENCFF758JNE, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF780UQU, ENCFF781XUM, ENCFF786BUI, ENCFF789AOM, ENCFF791ZDR, ENCFF794MMU, ENCFF796TQV, ENCFF801SNQ, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF820JMO, ENCFF821HAZ, ENCFF829WND, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847IGW, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF858OFI, ENCFF860SGX, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF872SFD, ENCFF881DTW, ENCFF885ZAO, ENCFF886UAF, ENCFF894COY, ENCFF903KDM, ENCFF904KCQ, ENCFF906CJJ, ENCFF907KCF, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF926FRX, ENCFF927LFD, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF936DQW, ENCFF936LNA, ENCFF937KFC, ENCFF938CNS, ENCFF939QLN, ENCFF946LMX, ENCFF949QCF, ENCFF951GZB, ENCFF951PCM, ENCFF952EQQ, ENCFF953FGT, ENCFF953WBM, ENCFF955WXI, ENCFF956RCJ, ENCFF956ZKG, ENCFF962ZCT, ENCFF966VVA, ENCFF970LRH, ENCFF974KKD, ENCFF974XWJ, ENCFF986DZE, ENCFF994JUO, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF999ZYF, ENCFF186VNL, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF349AIG, ENCFF477YHR, ENCFF499GDC, ENCFF574YMK, ENCFF653QJY, ENCFF720MPJ chr10 25253492 25253496 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000019978.17, Epb41l2 DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, SRR13142118, SRR13142122, SRR15198222, SRR2927112, SRR6338004, SRR9080666, SRR9178981 chr10 26220149 26220150 - Predicted LINE|L2|L2c ENSMUSG00000039089.16, L3mbtl3 ENCFF002FAA, ENCFF002FAI, ENCFF143PHU, ENCFF502ANK, ENCFF836JVX, ENCFF197OUM chr10 27116134 27116135 - Predicted SINE|B2|B3 ENSMUSG00000019899.18, Lama2 SRR2089604, SRR2089605, SRR2089609, SRR2089610, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089647, SRR2089649, SRR2089650 chr10 27235212 27235213 - Predicted LINE|L1|L1MdA_I ENSMUSG00000019899.18, Lama2 SRR2089603, SRR2089604, SRR2089607, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650 chr10 28583400 28583401 + Predicted LINE|L1|L1MdTf_II ENSMUSG00000049109.16, Themis SRR2089603, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089617, SRR2089618, SRR2089621, SRR2089622, SRR2089629, SRR2089630, SRR2089632, SRR2089633, SRR2089634, SRR2089638, SRR2089647, SRR2089648, SRR2089650 chr10 28590721 28590722 + Predicted LINE|L1|L1MdF_III ENSMUSG00000049109.16, Themis SRR2089608, SRR2089609, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089621, SRR2089633, SRR2089634, SRR2089636, SRR2089637, SRR2089638, SRR2089640, SRR2089648, SRR2089651 chr10 29575376 29575389 - Annotated LINE|L1|Lx6 ENSMUSG00000069682.8, Gm10275 ENSMUST00000217340.3, ENSMUST00000241313.1, ENSMUST00000242331.1, ENSMUST00000243363.1, ENSMUST00000092620.7 chr10 30505627 30505628 - Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000019791.13, Hint3 ENSMUST00000216617.2 chr10 32055983 32056003 - Predicted LINE|L1|L1MdGf_I ENSMUSG00000069670.9, Nkain2 SRR2089603, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089644, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr10 35361380 35361420 - Annotated LTR|ERVK|RLTR44A ENSMUSG00000111753.2, 1700054O05Rik ENSMUST00000214107.2 DRR091688, DRR091690, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 40223260 40223310 + Predicted SINE|Alu|PB1D7 ENSMUSG00000038481.14, Cdk19 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 41436671 41436672 - Annotated LTR|ERVK|RMER19B ENSMUSG00000075225.16, Ccdc162 ENSMUST00000160002.8 chr10 41944608 41944613 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000120201.1, ENSMUSG00000120201 ENSMUST00000241892.1, ENSMUST00000246246.1, ENSMUST00000242336.1 ENCFF426QFT chr10 43701888 43701908 + Annotated LTR|ERVK|MLTR31E_MM ENSMUSG00000111342.2, 4933404K13Rik ENSMUST00000214651.2, NR_131055.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178205, SRR3178206, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 4379159 4379215 - Predicted LTR|ERV1|MER34 ENSMUSG00000019763.12, Rmnd1 ENCFF002DMZ, ENCFF002DND, ENCFF106GQS, ENCFF138TOM, ENCFF330IYN, ENCFF489IGD, ENCFF647ICR, ENCFF888LGA, ENCFF970VKB, ENCFF167GWU, ENCFF197JAP, ENCFF229TCX, ENCFF343MZH, ENCFF562MVN, ENCFF694EPZ, ENCFF964DLW, ENCFF998BIQ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 43823892 43823893 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000019864.15, Rtn4ip1 ENSMUST00000214453.2 DRR091689, DRR091696, SRR9178978, SRR9178983 chr10 43837564 43837565 - Predicted DNA|hAT-Charlie|Charlie4 ENSMUSG00000019866.16, Crybg1 ENCFF143PHU, ENCFF570KYE, ENCFF885AJK, ENCFF270ERO, ENCFF064VAD, ENCFF538AIM, ENCFF596PMK chr10 44046443 44046452 + Annotated SINE|Alu|PB1D10 ENSMUSG00000091358.3, Speer5-ps1 ENSMUST00000169525.3, NR_001582.2 DRR091690, DRR091692, DRR091693, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697197, SRR10697203, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR5643190, SRR9178990 chr10 46110470 46110471 + Predicted LTR|ERVL-MaLR|MLT1E2 ENSMUSG00000111182.2, Gm35430 SRR15198217, SRR15198220, SRR15198221, SRR9178985 chr10 48495490 48495491 - Annotated LINE|L1|L1_Mur3 ENSMUSG00000065630.4, Gm24256 ENSMUST00000083696.4 chr10 49309463 49309482 - Annotated LINE|L1|Lx5c ENSMUSG00000056073.17, Grik2 ENSMUST00000219051.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 50626550 50626551 + Predicted LINE|L2|AmnL2-1 ENSMUSG00000038774.10, Ascc3 ENCFF002FAC, ENCFF407JTK, ENCFF894SHM chr10 51402436 51402437 + Annotated LTR|ERV1|LTRIS2 ENSMUSG00000112843.2, Gm46224 ENSMUST00000220221.2 ENCFF262URV, ENCFF326TQL, ENCFF372GOY, ENCFF922KQY chr10 52470099 52470118 + Annotated LTR|ERVK|RLTR34D_MM ENSMUSG00000112552.2, Gm36065 ENSMUST00000217856.2, ENSMUST00000219654.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643199, SRR6338004, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 53156243 53156244 - Annotated LINE|L2|L2 ENSMUSG00000038594.10, Cep85l ENSMUST00000219673.2 SRR3178204, SRR3178205, SRR5643190, SRR9178976, SRR9178979, SRR9178980, SRR9178989 chr10 53225917 53225926 - Annotated LINE|L1|Lx8 ENSMUSG00000038594.10, Cep85l ENSMUST00000220376.2 ENCFF757JMT, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 53285991 53286008 + Predicted LTR|ERVK|RLTR16B_MM ENSMUSG00000112132.2, Gm36229 ENCFF521IDK, ENCFF696TCH, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697200, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr10 55959908 55959942 + Predicted LINE|L1|L1MA9 ENSMUSG00000047669.9, Msl3l2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 55982839 55982840 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000047669.9, Msl3l2 ENCFF001NDD, ENCFF001RTD, ENCFF051PTY, ENCFF064PBF, ENCFF420RFN, ENCFF533JUU, ENCFF115LWP, ENCFF315OOH, ENCFF510TTU, ENCFF532UKS, ENCFF581KUX, ENCFF733MXU, ENCFF766LGO, ENCFF775SSI, ENCFF912MUD, ENCFF923VUD, ENCFF970VKB, ENCFF088SVK, ENCFF970LRH, ENCFF499GDC, ENCFF670VVN, ENCFF803OIY, ENCFF854IBU, ENCFF970VKL, SRR11428467, SRR2927112, SRR9178977 chr10 55982927 55983051 + Annotated LTR|ERVL|RMER15 ENSMUSG00000047669.9, Msl3l2 ENSMUST00000063138.8, NM_001163833.1 ENCFF001NCR, ENCFF001NDD, ENCFF001RTN, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF022FSI, ENCFF027BYX, ENCFF051PTY, ENCFF059IQN, ENCFF064PBF, ENCFF084PUC, ENCFF091WMS, ENCFF104LLO, ENCFF115KZV, ENCFF119KNP, ENCFF121BYS, ENCFF139MHN, ENCFF159OVE, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF289WHW, ENCFF297CWJ, ENCFF326TQL, ENCFF331WKS, ENCFF344LNZ, ENCFF363CYZ, ENCFF371VGE, ENCFF381JXP, ENCFF390QUP, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF449MIK, ENCFF450WAV, ENCFF478FDA, ENCFF495YGN, ENCFF527VIY, ENCFF533JUU, ENCFF534DID, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF670CXH, ENCFF704GEB, ENCFF711WAC, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF782JNB, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF852ZDB, ENCFF865WQE, ENCFF868XLZ, ENCFF880FYC, ENCFF896IIZ, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF931PFF, ENCFF935XRF, ENCFF937GBW, ENCFF989HJD, ENCFF005GQR, ENCFF017LOD, ENCFF023MKT, ENCFF033ZUH, ENCFF065TCZ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF269SRJ, ENCFF274ESJ, ENCFF315OOH, ENCFF330FNX, ENCFF335ZSA, ENCFF345BBC, ENCFF348FTH, ENCFF359GCY, ENCFF377LAC, ENCFF408NBX, ENCFF454ZUS, ENCFF521NCL, ENCFF532UKS, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF636NES, ENCFF647TTU, ENCFF667SYQ, ENCFF721ASG, ENCFF721BNO, ENCFF733MXU, ENCFF775SSI, ENCFF826RUZ, ENCFF831ISX, ENCFF838YLT, ENCFF912MUD, ENCFF923VUD, ENCFF945ICZ, ENCFF964WZW, ENCFF967NOO, ENCFF970VKB, ENCFF002SZY, ENCFF009AON, ENCFF033DWC, ENCFF037IZV, ENCFF046HWP, ENCFF049SEE, ENCFF053NFR, ENCFF065ZIE, ENCFF070YMI, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF131VEF, ENCFF133KGZ, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF170KWW, ENCFF172DMS, ENCFF189BIW, ENCFF235HER, ENCFF243TPB, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF299ENO, ENCFF313IFI, ENCFF316EEH, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF359DNK, ENCFF387BVS, ENCFF406LFV, ENCFF417OEG, ENCFF429TQT, ENCFF430ERW, ENCFF459TYQ, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF490ULA, ENCFF492HRC, ENCFF505PJK, ENCFF505WKA, ENCFF517EJZ, ENCFF530DUT, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF576EOD, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF611OFH, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF637PIP, ENCFF644GYU, ENCFF680WIN, ENCFF689UNV, ENCFF693POR, ENCFF707HQI, ENCFF712BKP, ENCFF713JXV, ENCFF727JTZ, ENCFF747VYT, ENCFF765UBL, ENCFF780UQU, ENCFF801SNQ, ENCFF809QBQ, ENCFF811ZQO, ENCFF860SGX, ENCFF864DTX, ENCFF926FRX, ENCFF938XTE, ENCFF970LRH, ENCFF999ZYF, ENCFF014SLC, ENCFF186VNL, ENCFF242SVY, ENCFF248ELC, ENCFF361MLD, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF517DCU, ENCFF574YMK, ENCFF582WGH, ENCFF653QJY, ENCFF670VVN, ENCFF671TUD, ENCFF854IBU, SRR11428467, SRR2927112, SRR6338004, SRR9178977 chr10 56986484 56986485 + Predicted LINE|L1|L1Lx_IV ENSMUSG00000112345.2, Gm40652 ENCFF067UCQ, ENCFF134HVE, ENCFF236TUH, ENCFF304DLW, ENCFF390NKP, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF657UWH, ENCFF686KMX, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF160TQC, ENCFF199IWW, ENCFF344OJQ, ENCFF423TSB, ENCFF641WPY, ENCFF723MAR chr10 56993318 56993319 + Annotated LTR|ERVL|MT2B1 ENSMUSG00000112345.2, Gm40652 ENSMUST00000218944.2 chr10 59305309 59305337 - Predicted LINE|L1|L1M4a1 ENSMUSG00000009647.14, Mcu DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 61311039 61311043 + Predicted LTR|ERV1|RMER5 ENSMUSG00000037151.9, Lrrc20 ENCFF001NDZ, ENCFF067UCQ, ENCFF151YNV, ENCFF270ERO, ENCFF369YLA, ENCFF377LAC, ENCFF390NKP, ENCFF429BQZ, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF642YTY, ENCFF804UQS, ENCFF829RHM, ENCFF920FVY, ENCFF160TQC, ENCFF277QHC, ENCFF319SDE, ENCFF344OJQ, ENCFF423TSB, ENCFF517DCU, ENCFF641WPY, ENCFF728WJB, ENCFF782WDV, SRR11428467, SRR15198226, SRR2927113, SRR9178988 chr10 62178477 62178501 - Annotated SINE|MIR|MIRc ENSMUSG00000037012.19, Hk1 ENSMUST00000130422.8, ENSMUST00000143179.2, ENSMUST00000142527.2 ENCFF002ERU, ENCFF002ERW, ENCFF084DCW, ENCFF181RDS, ENCFF452AXW, ENCFF575RUC, ENCFF793IYH, ENCFF195JLT, ENCFF234LUQ chr10 62247792 62247793 - Predicted SINE|MIR|MIRb ENSMUSG00000020080.9, Hkdc1 ENCFF222GPK, ENCFF448TTG, ENCFF587VDB, ENCFF636NES, ENCFF725ATS, ENCFF962OCF, ENCFF399XUL chr10 62534377 62534378 + Predicted LINE|L1|Lx5c ENSMUSG00000112378.2, Gm47261 DRR091688, DRR091689, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697199, SRR11428468, SRR11428469, SRR13142118, SRR13142122, SRR15198221, SRR15198222, SRR15198224, SRR15198227 chr10 62804817 62804818 + Predicted LTR|ERVK|RLTR20D ENSMUSG00000020070.19, ENSMUSG00000036875.16, Rufy2, Dna2 SRR11428468, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178989 chr10 65957811 65957812 - Predicted LTR|ERVL|LTR33 ENSMUSG00000100000.8, 1700023F02Rik SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643199, SRR6904683 chr10 65981075 65981111 + Annotated LINE|L1|Lx8 ENSMUSG00000112210.2, 4930407I19Rik ENSMUST00000220265.2, NR_131070.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178987, SRR9178992 chr10 66753517 66753518 - Annotated LTR|ERVL-MaLR|ORR1C1 ENSMUSG00000097134.3, 1110002J07Rik ENSMUST00000219021.2 chr10 66754242 66754350 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000097134.3, ENSMUSG00000120434.1, 1110002J07Rik, ENSMUSG00000120434 ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF051JSS, ENCFF064PBF, ENCFF074HTO, ENCFF084PUC, ENCFF091WMS, ENCFF092YWY, ENCFF108UNS, ENCFF115KZV, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126RJS, ENCFF139MHN, ENCFF140VGY, ENCFF178PMH, ENCFF184EAT, ENCFF186RYS, ENCFF198NQV, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF261OTH, ENCFF277XPM, ENCFF283XKV, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF308LTO, ENCFF331WKS, ENCFF345OIF, ENCFF352VWM, ENCFF363XWU, ENCFF371VGE, ENCFF381JXP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF421SNO, ENCFF422ATU, ENCFF432ZLQ, ENCFF439OFV, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF494YXM, ENCFF504ULZ, ENCFF514BEA, ENCFF521UGJ, ENCFF524EDD, ENCFF533CLY, ENCFF534DID, ENCFF540XSD, ENCFF552NWL, ENCFF560YXX, ENCFF564OKH, ENCFF585YYC, ENCFF589MBR, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF623BKO, ENCFF625JLB, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF698LQF, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF743QXJ, ENCFF771YNG, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF784LWT, ENCFF794FBC, ENCFF795DLS, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF868XLZ, ENCFF881UBL, ENCFF896IIZ, ENCFF896MQK, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF951MOU, ENCFF951UXE, ENCFF989HJD, ENCFF991TPB, ENCFF003GJV, ENCFF006JHA, ENCFF009AVK, ENCFF012KPC, ENCFF024CUG, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF045YRV, ENCFF046HWP, ENCFF054EOL, ENCFF055PZZ, ENCFF057MDU, ENCFF061WTN, ENCFF065UBR, ENCFF068CQU, ENCFF073RJJ, ENCFF077CYB, ENCFF077YZF, ENCFF080DNG, ENCFF080REY, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF090EUZ, ENCFF111MWQ, ENCFF116QKZ, ENCFF118YHP, ENCFF121IDD, ENCFF133PKQ, ENCFF134PXJ, ENCFF136TYP, ENCFF142PTA, ENCFF149BQJ, ENCFF151XBP, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF163DKN, ENCFF169JOQ, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF186NDY, ENCFF192XJA, ENCFF197JAP, ENCFF197TJB, ENCFF203EWG, ENCFF205CDI, ENCFF209RRO, ENCFF223SMG, ENCFF229TCX, ENCFF237JCE, ENCFF239RQP, ENCFF243LBQ, ENCFF247VEN, ENCFF249LSC, ENCFF254TFB, ENCFF258WLS, ENCFF260UQJ, ENCFF267VBU, ENCFF268ZHE, ENCFF271RFU, ENCFF272WGJ, ENCFF273CBP, ENCFF275HRX, ENCFF279EVY, ENCFF286RSE, ENCFF291SCS, ENCFF296ITI, ENCFF299ENO, ENCFF303BIV, ENCFF307OHZ, ENCFF308WGP, ENCFF310WDZ, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF328TJH, ENCFF332IRR, ENCFF332RWQ, ENCFF335UNU, ENCFF338DAA, ENCFF344VGL, ENCFF348RRM, ENCFF352KGC, ENCFF366CSN, ENCFF369VAI, ENCFF370VOV, ENCFF374VAZ, ENCFF377OQI, ENCFF387BVS, ENCFF390AUP, ENCFF397MUI, ENCFF404HLB, ENCFF408FFP, ENCFF411YXB, ENCFF414IHO, ENCFF417INY, ENCFF420REU, ENCFF420RGI, ENCFF422ZNC, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF429TQT, ENCFF437QAE, ENCFF437ZSM, ENCFF456GLS, ENCFF469JWF, ENCFF478MHH, ENCFF479WHZ, ENCFF483KXD, ENCFF486BJT, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF513BRJ, ENCFF515GXB, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF529YFS, ENCFF531JWM, ENCFF536ZFC, ENCFF537DSI, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF557JPW, ENCFF559QXN, ENCFF561CZI, ENCFF565CON, ENCFF565DII, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF588JAU, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF598LJF, ENCFF601JTS, ENCFF603QSQ, ENCFF611QZE, ENCFF613SEJ, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF635XED, ENCFF636SOT, ENCFF637GVH, ENCFF644GYU, ENCFF647KBV, ENCFF658NHH, ENCFF661UPO, ENCFF673BPE, ENCFF678CRA, ENCFF680OWA, ENCFF685GDB, ENCFF693POR, ENCFF696TTO, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF727JTZ, ENCFF735BVR, ENCFF740TFX, ENCFF740WXS, ENCFF741PLM, ENCFF759WDO, ENCFF765AQX, ENCFF769FVU, ENCFF781XUM, ENCFF782CNW, ENCFF801SNQ, ENCFF803ZUN, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF814PHK, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF829HAB, ENCFF832FTK, ENCFF834TET, ENCFF834TQY, ENCFF843WRN, ENCFF847IGW, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF881YOK, ENCFF894COY, ENCFF899EJT, ENCFF901KUE, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF917KUH, ENCFF926FRX, ENCFF935ZEM, ENCFF938CNS, ENCFF939QLN, ENCFF949QCF, ENCFF956ZKG, ENCFF958BIE, ENCFF962ZCT, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF999ZYF chr10 66754435 66754457 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000097134.3, ENSMUSG00000120434.1, 1110002J07Rik, ENSMUSG00000120434 ENCFF040EEJ, ENCFF051JSS, ENCFF094CCP, ENCFF114PSQ, ENCFF234MZC, ENCFF277XPM, ENCFF296ASE, ENCFF305IXM, ENCFF439OFV, ENCFF494YXM, ENCFF514BEA, ENCFF524EDD, ENCFF534DID, ENCFF564OKH, ENCFF639RWJ, ENCFF667FDW, ENCFF723KAG, ENCFF775BPV, ENCFF793CWJ, ENCFF841OXD, ENCFF851ESH, ENCFF881UBL, ENCFF884TJE, ENCFF913CFN, ENCFF956WVJ, ENCFF972IVS, ENCFF009AVK, ENCFF033DWC, ENCFF046HWP, ENCFF049SEE, ENCFF073RJJ, ENCFF133KGZ, ENCFF133PKQ, ENCFF137OYQ, ENCFF156XMZ, ENCFF210BVU, ENCFF247VEN, ENCFF260UQJ, ENCFF297PPT, ENCFF310HAL, ENCFF324ITL, ENCFF338DAA, ENCFF363PDR, ENCFF386CRY, ENCFF390AUP, ENCFF390ZZH, ENCFF408FFP, ENCFF417OEG, ENCFF424GQM, ENCFF427YDU, ENCFF429TQT, ENCFF437ZSM, ENCFF478BEL, ENCFF478MHH, ENCFF497GLK, ENCFF505PJK, ENCFF543PXT, ENCFF558UDY, ENCFF561CZI, ENCFF572JDP, ENCFF576EOD, ENCFF584ZUK, ENCFF598LJF, ENCFF619SKV, ENCFF637GVH, ENCFF647KBV, ENCFF661UPO, ENCFF673ZDG, ENCFF696TTO, ENCFF700IPC, ENCFF713JXV, ENCFF724VJN, ENCFF753HNF, ENCFF755REI, ENCFF765UBL, ENCFF779MMO, ENCFF812QQI, ENCFF847IGW, ENCFF859MTL, ENCFF877SON, ENCFF881YOK, ENCFF885ZAO, ENCFF894COY, ENCFF901KUE, ENCFF903KDM, ENCFF907KCF, ENCFF916BSM, ENCFF939QLN, ENCFF976SMI, ENCFF986DZE, ENCFF997QQG chr10 66756025 66756037 - Annotated SINE|MIR|MIR3 ENSMUSG00000097134.3, 1110002J07Rik ENSMUST00000181710.3 ENCFF001NCR, ENCFF056GXQ, ENCFF083BIG, ENCFF179WPT, ENCFF723QIC, ENCFF783MLO, ENCFF931DDH, ENCFF941QCZ, ENCFF107YGR, ENCFF647RUH, ENCFF655KBW, ENCFF791ZDR, ENCFF812LAI, ENCFF849PKR, ENCFF932XKS chr10 66935769 66935794 - Predicted SINE|B4|B4A ENSMUSG00000019873.9, Reep3 ENCFF432ZLQ, ENCFF605IFN, ENCFF065TCZ, ENCFF271OHB, ENCFF374YTS, ENCFF394BDJ, ENCFF448TTG, ENCFF532UKS, ENCFF572TOH, ENCFF587VDB, ENCFF657FNE, ENCFF725ATS, ENCFF914YDJ, ENCFF935LAF, ENCFF945ICZ, ENCFF144EDQ, ENCFF209RRO, ENCFF866IHG, ENCFF302TQH, ENCFF361MLD, ENCFF670VVN, ENCFF749STK, ENCFF847LGC, ENCFF932SOZ chr10 67406179 67406180 - Predicted LTR|ERVL-MaLR|MLT1L ENSMUSG00000112141.2, 4930563J15Rik DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091698, DRR091699, SRR10697198, SRR10697202, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198221, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9178982 chr10 67407872 67407873 + Annotated LTR|ERVL-MaLR|MLT1L ENSMUSG00000074999.3, Gm10797 ENSMUST00000099661.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178205, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 67737166 67737167 - Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000037855.16, Zfp365 ENSMUST00000132870.8 chr10 69185988 69185989 - Predicted LINE|Penelope|Penelope1_Vert ENSMUSG00000019942.14, Cdk1 ENCFF002DMZ, ENCFF048FGD, ENCFF089WMB, ENCFF437AJW, ENCFF449MIK, ENCFF885AJK, ENCFF581KUX, ENCFF834VIK, ENCFF964WZW, ENCFF346HDC, ENCFF552KEA, ENCFF894SHM, ENCFF361MLD, ENCFF517DCU, ENCFF667KKO, DRR091690, SRR11428467, SRR11428469, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR5643201, SRR6338004, SRR9178979 chr10 71037568 71037590 + Predicted LTR|ERVK|RLTR15 ENSMUSG00000112028.2, 1700113B09Rik ENSMUST00000218350.2, NR_131003.1 ENCFF001NDA, ENCFF001NDD, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, SRR11428467, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 73162858 73162871 - Predicted LTR|ERVK|RLTR17 ENSMUSG00000085456.3, Gm15398 ENSMUST00000147653.2 DRR091688, DRR091689, DRR091699, SRR10697199, SRR11428467, SRR11428468, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665, SRR9178980, SRR9178991 chr10 7479793 7479805 + Predicted SINE|B4|B4 ENSMUSG00000019796.13, Lrp11 DRR091689, DRR091691, DRR091696, SRR10697196, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR15198220, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 75114097 75114118 + Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000033444.15, Specc1l DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR5643191, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666 chr10 7673937 7673938 + Predicted SINE|B2|B3 ENSMUSG00000015757.11, Ppil4 ENCFF138TOM, ENCFF160HKC, ENCFF453XOG, ENCFF491XRO, ENCFF654BXL, ENCFF925ONP, ENCFF209RRO, ENCFF237JCE, ENCFF264PYB, ENCFF308WGP, ENCFF334XFS, ENCFF370VOV, ENCFF426ZCK, ENCFF484PQK, ENCFF498OHV chr10 76865408 76865409 - Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000112773.2, Gm3137 ENSMUST00000218177.2, NR_152191.1 chr10 7897055 7897056 - Annotated LTR|ERVL|RMER15 ENSMUSG00000112360.2, Gm48614 ENSMUST00000218165.2 ENCFF178HDG chr10 79349666 79349667 + Predicted LINE|L1|L1Lx_II ENSMUSG00000120605.1, ENSMUSG00000120605 SRR2089605, SRR2089650, SRR2089651 chr10 79503596 79503601 + Predicted SINE|Alu|B1_Mur4 ENSMUSG00000020308.8, Tpgs1 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697202, SRR13142120, SRR15198218, SRR15198220, SRR15198223, SRR15198224, SRR2927111, SRR2927112, SRR9080664, SRR9080665 chr10 79507319 79507320 - Annotated LTR|ERVK|RMER17D ENSMUSG00000120698.1, ENSMUSG00000120698 ENSMUST00000245283.1 chr10 79687107 79687108 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000006498.17, Ptbp1 ENCFF002FAE, ENCFF013CHH, ENCFF065LOT, ENCFF148XRK, ENCFF199IRM, ENCFF296VFB, ENCFF377LAC, ENCFF448TTG, ENCFF573UIH, ENCFF654AEJ, ENCFF721BNO, ENCFF860XMD, ENCFF962FIU, ENCFF964WZW, ENCFF008XVO, ENCFF075EMK, ENCFF269AST, ENCFF446LMP, ENCFF749STK, ENCFF847LGC, ENCFF911OIZ, SRR11428469, SRR15198227 chr10 79905541 79905542 - Predicted LTR|Gypsy|LTR81C ENSMUSG00000035673.11, Sbno2 ENCFF001NCP, ENCFF001NDZ, ENCFF198RBJ, ENCFF733LFV, SRR3178204, SRR3178205, SRR5643192 chr10 80661831 80661840 + Predicted DNA|hAT-Tip100|MER97a ENSMUSG00000035242.16, Oaz1 DRR091688, DRR091689, DRR091690, DRR091696, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR11428468, SRR11428469, SRR13142119, SRR13142120, SRR13142121, SRR15198218, SRR15198226, SRR2040601, SRR2927113, SRR9178977, SRR9178980, SRR9178983, SRR9178987, SRR9178991 chr10 81102954 81102955 + Predicted LTR|ERVL-MaLR|ORR1A3-int ENSMUSG00000004931.12, Apba3 ENCFF043JGD, ENCFF064PBF, ENCFF376MQF, ENCFF426QFT, ENCFF445BBH, ENCFF755FCM, ENCFF761RKP, ENCFF771LLL, ENCFF013HYW, ENCFF222GPK, ENCFF510TTU, ENCFF533DWD, ENCFF608LAL, ENCFF935LAF, ENCFF962OCF, ENCFF967NOO, ENCFF458EUS, ENCFF705CES, ENCFF716NXU, ENCFF806XNV, ENCFF983GRF, DRR091692, DRR091697, DRR091698, SRR10697198, SRR13142118, SRR13142121, SRR13142122, SRR15198219, SRR6904685, SRR9080666, SRR9178982, SRR9178992 chr10 81245529 81245577 + Predicted SINE|MIR|MIR3 ENSMUSG00000085327.3, Gm16104 ENCFF001NDA, ENCFF002DND, ENCFF027BYX, ENCFF059IQN, ENCFF064PBF, ENCFF090USB, ENCFF106RGV, ENCFF163LPQ, ENCFF178ZVU, ENCFF198RBJ, ENCFF326TQL, ENCFF327MSM, ENCFF331WKS, ENCFF345OIF, ENCFF363CYZ, ENCFF426QFT, ENCFF450WAV, ENCFF504ULZ, ENCFF581WWO, ENCFF585YYC, ENCFF590NVM, ENCFF755FCM, ENCFF796NHQ, ENCFF828WIK, ENCFF841OXD, ENCFF874ELO, ENCFF896IIZ, ENCFF931PFF, ENCFF996STG, ENCFF234LUQ, ENCFF002SZY, ENCFF009AON, ENCFF014CMK, ENCFF041PJP, ENCFF049SEE, ENCFF065ZIE, ENCFF082BJV, ENCFF087IUJ, ENCFF088SVK, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF141YUD, ENCFF163DKN, ENCFF243TPB, ENCFF267KZS, ENCFF338LFG, ENCFF344VGL, ENCFF387BVS, ENCFF406LFV, ENCFF411KCB, ENCFF417OEG, ENCFF430ERW, ENCFF487OHM, ENCFF490ULA, ENCFF566HCI, ENCFF627XGF, ENCFF637PIP, ENCFF647RUH, ENCFF689UNV, ENCFF705CES, ENCFF712BKP, ENCFF727EPG, ENCFF751QWY, ENCFF809QBQ, ENCFF830CBI, ENCFF864DTX, ENCFF886UAF, ENCFF952LUC, ENCFF955YCX, ENCFF970LRH, DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697198, SRR10697202, SRR10697203, SRR11428467, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178981, SRR9178988 chr10 81844213 81844214 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000111985.2, Gm8290 ENSMUST00000218202.2 chr10 82607155 82607156 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000112286.3, Gm47561 ENSMUST00000219360.2 SRR15198220, SRR15198226 chr10 83158746 83158747 - Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000034591.6, Slc41a2 ENSMUST00000154926.2 chr10 83557661 83557662 + Predicted DNA|hAT-Charlie|URR1A ENSMUSG00000087651.4, 1500009L16Rik SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198225, SRR15198227, SRR2927112 chr10 84324157 84324158 + Annotated LTR|ERV1|RMER21B ENSMUSG00000020033.3, 4930463O16Rik ENSMUST00000020222.2, NR_108059.1 SRR15198217, SRR15198218, SRR15198219, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR6338004 chr10 84673991 84674013 + Annotated LINE|CR1|L3 ENSMUSG00000020037.16, Rfx4 ENSMUST00000020226.4, ENSMUST00000095388.5, NM_027689.3 DRR091689, DRR091690, DRR091691, DRR091692, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142121, SRR15198220, SRR15198221, SRR15198222, SRR15198226, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR5643201, SRR6338004, SRR9080663, SRR9080664, SRR9080666, SRR9178981, SRR9178986, SRR9178987, SRR9178988 chr10 85931713 85931724 + Annotated SINE|B4|B4 ENSMUSG00000112493.2, 4930486F22Rik ENSMUST00000218077.2, NR_038024.1 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428470, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 86656775 86656776 + Predicted DNA|hAT-Tip100|Arthur1 ENSMUSG00000054027.9, Nt5dc3 ENCFF083BIG, ENCFF221NAP, ENCFF273CJD, ENCFF585YYC, ENCFF734FHF, ENCFF106RLX, ENCFF566HCI, ENCFF581ZWM, ENCFF927LFD chr10 86808005 86808006 + Annotated LTR|ERVL|LTR41C NR_165263.1 chr10 86808080 86808081 + Annotated LTR|ERVL|LTR41C ENSMUSG00000089656.2, Gm16271 ENSMUST00000162837.2 ENCFF782NPY chr10 87864166 87864208 + Predicted LTR|ERVK|RMER19B ENSMUSG00000112932.2, Gm48308 SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089634, SRR2089635, SRR2089636, SRR2089646 chr10 87933014 87933015 + Predicted LINE|L1|L1MdA_I ENSMUSG00000112932.2, Gm48308 SRR2089615, SRR2089621, SRR2089650 chr10 87980829 87980830 + Predicted LTR|ERVL|MER68 ENSMUSG00000035351.17, Nup37 ENCFF437AJW, DRR091688, DRR091699, SRR11428467, SRR15198218, SRR15198220, SRR2040601, SRR2927112, SRR2927113 chr10 88370901 88370907 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000060002.15, Chpt1 ENCFF134HVE, ENCFF170XMM, ENCFF236TUH, ENCFF304DLW, ENCFF444YCN, ENCFF588DUN, ENCFF604SXL, ENCFF686KMX, ENCFF775SSI, ENCFF808PVJ, ENCFF840XYZ, ENCFF868WEJ, ENCFF344OJQ, ENCFF517DCU, ENCFF970VKL chr10 88565401 88565409 + Predicted LINE|L1|L1MA7 ENSMUSG00000060904.15, Arl1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9080666, SRR9178981, SRR9178982, SRR9178985 chr10 92236871 92236891 + Annotated LTR|ERVK|RLTR17 ENSMUSG00000110794.2, 4930401A07Rik ENSMUST00000216155.2, ENSMUST00000214657.2 SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178987, SRR9178988, SRR9178990, SRR9178991 chr10 92955581 92955582 + Predicted LINE|L1|L1MA4 ENSMUSG00000020015.11, Cdk17 SRR2089630, SRR2089638, SRR2089639 chr10 92974054 92974055 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000020015.11, Cdk17 SRR2089623, SRR2089629, SRR2089631, SRR2089634, SRR2089635, SRR2089637, SRR2089638, SRR2089639, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr10 93042847 93042871 + Annotated LINE|L1|L1MEg ENSMUSG00000020015.11, Cdk17 ENSMUST00000214445.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr10 94386225 94386226 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000020023.19, Tmcc3 ENCFF533DWD, ENCFF831ISX, ENCFF499CDP, ENCFF803OIY chr10 94551055 94551056 + Predicted LINE|L1|L1MdTf_II ENSMUSG00000020024.8, Cep83 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR2927112, SRR9178979, SRR9178980 chr10 94576763 94576765 + Predicted LINE|L2|L2a ENSMUSG00000020024.8, Cep83 SRR2089604, SRR2089619, SRR2089632, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089651 chr10 95468100 95468101 - Annotated LTR|ERVL-MaLR|MTE2a ENSMUSG00000112439.2, Gm33336 ENSMUST00000219656.2 DRR091688, DRR091689, DRR091693, DRR091696, DRR091698 chr10 95567060 95567090 + Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000112188.2, Gm47708 ENSMUST00000219583.2, NR_166666.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr10 95618542 95618543 + Annotated LTR|ERVL-MaLR|ORR1A1 ENSMUSG00000101517.8, 4732465J04Rik ENSMUST00000244739.1 chr10 98136682 98136683 - Predicted SINE|Alu|PB1D10 ENSMUSG00000112896.2, Gm8633 DRR091692, DRR091695, DRR091696, DRR091697, SRR10697197, SRR10697203, SRR11428468, SRR13142118, SRR2040601, SRR2927113 chr10 99175900 99175901 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000044633.5, B530045E10Rik ENCFF199IRM, ENCFF374YTS, ENCFF448TTG, ENCFF478KOR, ENCFF654AEJ, ENCFF657FNE, ENCFF725ATS, ENCFF008XVO, ENCFF510AYI, ENCFF749STK chr10 99980407 99980411 - Predicted LTR|ERVK|ERVB4_1B-LTR_MM ENSMUSG00000112831.2, Gm35533 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, SRR10697198, SRR10697200, SRR10697202, SRR11428469, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198226, SRR15198227, SRR2927112, SRR2927113 chr11 100511581 100511582 - Predicted DNA|hAT-Charlie|URR1B ENSMUSG00000014195.17, Dnajc7 ENCFF002FAE, ENCFF896IIZ, ENCFF005GQR, ENCFF115LWP, ENCFF335ZSA, ENCFF374YTS, ENCFF377UGQ, ENCFF408NBX, ENCFF448TTG, ENCFF632LPV, ENCFF744OEI, ENCFF845NXM, ENCFF933KQV, ENCFF723QWN, ENCFF855UFX, ENCFF872SFD, ENCFF242SVY, ENCFF342GAL chr11 100662577 100662578 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000017747.14, Ghdc ENCFF022FSI, ENCFF027BYX, ENCFF040EEJ, ENCFF075MGH, ENCFF214IUN, ENCFF218HNK, ENCFF554PUC, ENCFF589REP, ENCFF782JNB, ENCFF865WQE, ENCFF915FID, ENCFF157IFW, ENCFF359DNK, ENCFF492HRC, ENCFF705CES, ENCFF794MMU, ENCFF864DTX, SRR15198218 chr11 100663332 100663333 - Predicted LTR|ERV1|MER67C ENSMUSG00000017747.14, Ghdc ENCFF210BCB, ENCFF307VAF, ENCFF326TQL, ENCFF344LNZ, ENCFF363CYZ, ENCFF723QIC, ENCFF194DAO, ENCFF249LSC, ENCFF406LFV, ENCFF490ULA, ENCFF578MOR, ENCFF619SKV, DRR091692, SRR15198220 chr11 101918005 101918006 - Predicted LINE|L2|L2a ENSMUSG00000052373.15, Mpp3 ENCFF065LOT, ENCFF065TCZ, ENCFF148XRK, ENCFF156YWS, ENCFF247QZW, ENCFF271OHB, ENCFF296VFB, ENCFF326UXM, ENCFF355AMN, ENCFF369YLA, ENCFF374YTS, ENCFF377UGQ, ENCFF394BDJ, ENCFF408NBX, ENCFF454ZUS, ENCFF465BBM, ENCFF478KOR, ENCFF487DYP, ENCFF510TTU, ENCFF587VDB, ENCFF595WXV, ENCFF632LPV, ENCFF721BNO, ENCFF725ATS, ENCFF818BAS, ENCFF831ISX, ENCFF914YDJ, ENCFF924LPZ, ENCFF962OCF, ENCFF967NOO, ENCFF119IHT, ENCFF269AST, ENCFF399XUL, ENCFF499CDP, ENCFF510IAG, ENCFF525QIM, ENCFF670VVN, ENCFF716YKR, ENCFF728WJB, ENCFF749STK, ENCFF803OIY, ENCFF911OIZ, ENCFF970VKL, SRR11428469, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198223, SRR15198226, SRR2927111, SRR2927112 chr11 101925909 101925910 - Annotated LINE|L1|L1MEg ENSMUSG00000087216.2, E130111B04Rik ENSMUST00000156781.2 ENCFF335ZSA, SRR15198225 chr11 102319359 102319394 + Predicted SINE|Alu|B1_Mm ENSMUSG00000034708.13, Grn ENCFF023RRS, ENCFF092YWY, ENCFF486NGU, ENCFF013SNI, ENCFF107YGR, ENCFF121IDD, ENCFF140WZW, ENCFF141YUD, ENCFF163GEC, ENCFF210BVU, ENCFF260UQJ, ENCFF296ITI, ENCFF331YYO, ENCFF399TOF, ENCFF404HLB, ENCFF433QNW, ENCFF485GFE, ENCFF486BJT, ENCFF513BRJ, ENCFF612KDP, ENCFF696VQM, ENCFF765AQX, ENCFF881DTW, ENCFF908MGO, ENCFF936LNA, ENCFF953FGT, ENCFF958FDX, ENCFF986DZE chr11 102589144 102589145 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000020925.17, Ccdc43 ENCFF749STK, DRR091690, DRR091698, DRR091699, SRR10697201, SRR15198220, SRR9080666, SRR9178984 chr11 102938062 102938104 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000020936.9, Nmt1 ENCFF082HKQ, ENCFF107XGE, ENCFF114PSQ, ENCFF273CJD, ENCFF400XLQ, ENCFF403ORF, ENCFF432ZLQ, ENCFF654BXL, ENCFF745HSV, ENCFF789LUC, ENCFF942WIP, ENCFF982BLT, ENCFF345BBC, ENCFF006JHA, ENCFF035BBA, ENCFF039PJR, ENCFF060FGD, ENCFF142PTA, ENCFF151XBP, ENCFF242MZE, ENCFF247VEN, ENCFF256UWN, ENCFF324ITL, ENCFF335UNU, ENCFF343MZH, ENCFF358UHV, ENCFF386CRY, ENCFF386XTQ, ENCFF399YLV, ENCFF486GBM, ENCFF497NJW, ENCFF504PGI, ENCFF580KHN, ENCFF588JAU, ENCFF613SEJ, ENCFF618PVF, ENCFF683WFA, ENCFF695XIY, ENCFF696XZL, ENCFF754VQW, ENCFF757JMT, ENCFF786BUI, ENCFF817HZQ, ENCFF866IHG, ENCFF908MGO, ENCFF950FFF, ENCFF955WXI, ENCFF964DLW, ENCFF985NHB, ENCFF996WVL chr11 106863930 106863964 - Annotated DNA|hAT-Ac|OldhAT1 ENSMUSG00000086481.3, Gm11707 ENSMUST00000150366.3, ENSMUST00000241184.1, ENSMUST00000245805.1, ENSMUST00000247352.1, ENSMUST00000246811.1, ENSMUST00000244234.1, ENSMUST00000243359.1 ENCFF001NCP, ENCFF001NCR chr11 108271990 108272023 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000000049.12, Apoh ENSMUST00000146050.2, ENSMUST00000152958.8 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 108600898 108600899 + Annotated LINE|L2|L2 ENSMUSG00000020728.18, Cep112 ENSMUST00000151755.2 chr11 109237665 109237703 + Annotated SINE|B4|B4A ENSMUSG00000099630.2, 1700096J18Rik ENSMUST00000190043.2, NR_027883.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 109357131 109357132 - Predicted LTR|ERVL|MT2_Mm ENSMUSG00000041920.15, Slc16a6 ENCFF745HSV, ENCFF771LLL, ENCFF913CFN, ENCFF698WQO, ENCFF705CES, ENCFF817HZQ chr11 109704899 109704900 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000020617.14, 1700012B07Rik ENSMUST00000143578.2 SRR5643192 chr11 109736665 109736705 + Annotated DNA|hAT-Charlie|MER58A ENSMUSG00000087393.2, 1700023C21Rik ENSMUST00000143247.2, NR_045909.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR6904683, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 112715953 112715954 - Annotated LTR|ERVL-MaLR|MTEa NR_130164.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 113575586 113575587 + Predicted SINE|B4|ID_B1 ENSMUSG00000041623.18, D11Wsu47e ENCFF002FAC, ENCFF426QFT, ENCFF437AJW, DRR091688, DRR091693, DRR091696, DRR091699, SRR11428470, SRR15198220, SRR15198225, SRR2927112, SRR3178206 chr11 11434546 11434575 + Annotated LINE|L1|Lx8 NM_001382244.1, NM_001382245.1 ENCFF001NCR, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR3178206, SRR6338004, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr11 114893211 114893212 - Predicted SINE|Alu|B1F ENSMUSG00000044811.15, Cd300c2 ENCFF056GXQ, ENCFF229AIZ, ENCFF283XKV, ENCFF321BMO, ENCFF621PKT, ENCFF672HUA, ENCFF691URX, ENCFF710DAI, ENCFF723KAG, ENCFF764ZUI, ENCFF234LUQ, ENCFF970VKB, ENCFF002ZAX, ENCFF019PVP, ENCFF207HZS, ENCFF347EUO, ENCFF486GBM, ENCFF505YPK, ENCFF543GNI, ENCFF696XZL, ENCFF781MKK, ENCFF951GZB, ENCFF994JUO chr11 114894032 114894033 - Predicted LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000044811.15, Cd300c2 ENCFF251TMY, ENCFF210BVU, ENCFF306FQJ, ENCFF613YNK, ENCFF661TOM, ENCFF746ZCS, ENCFF845NUY, ENCFF869MFM, ENCFF916BSM, ENCFF932XKS, ENCFF936DQW, ENCFF178HDG chr11 115884540 115884541 - Annotated SINE|ID|ID4 NR_152190.1 chr11 116643175 116643176 + Annotated LTR|ERVK|RLTR19A2 ENSMUSG00000056032.13, BC018473 ENSMUST00000145570.8 chr11 116764071 116764072 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000020818.17, Mfsd11 ENCFF002EZY, ENCFF002FAC, ENCFF156YWS, ENCFF274ESJ, ENCFF379TZT, ENCFF468AKL, ENCFF532UKS, ENCFF590LNP, ENCFF924LPZ, ENCFF969WLB, ENCFF538ZTW, ENCFF062GNP, ENCFF186VNL, ENCFF477YHR, ENCFF592WZB, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643192 chr11 117193154 117193171 + Predicted SINE|B4|RSINE1 ENSMUSG00000059248.14, Septin9 SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089636, SRR2089638, SRR2089639, SRR2089641, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr11 118107052 118107053 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000017132.18, Cyth1 ENCFF606EDP, ENCFF844KCR, ENCFF896IIZ, ENCFF027GCQ, ENCFF037LEJ, ENCFF060FGD, ENCFF090EUZ, ENCFF247VEN, ENCFF404HLB, ENCFF417INY, ENCFF450CUC, ENCFF581ZWM, ENCFF588JAU, ENCFF668SQN, ENCFF680OWA, ENCFF816CPX, ENCFF894COY, ENCFF910CTW, ENCFF944RHJ chr11 118755503 118755504 - Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000025576.18, Rbfox3 SRR2089623, SRR2089630, SRR2089638, SRR2089640, SRR2089649 chr11 119133090 119133091 + Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000039963.21, Ccdc40 SRR2089610, SRR2089612, SRR2089616, SRR2089617, SRR2089618, SRR2089649 chr11 119326738 119326739 + Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000070327.15, Rnf213 ENCFF002ERU, ENCFF002EZY, ENCFF002FAC, ENCFF002FAG, ENCFF048FGD, ENCFF143PHU, ENCFF198RBJ, ENCFF437AJW, ENCFF502ANK, ENCFF389ZWR chr11 119360234 119360235 - Predicted LINE|L1|L1MdMus_I ENSMUSG00000109408.2, A930037H05Rik SRR2089605, SRR2089612, SRR2089621, SRR2089622, SRR2089629, SRR2089630, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr11 120525442 120525492 - Predicted SINE|Alu|PB1D9 ENSMUSG00000051510.14, Mafg ENCFF001RTD, ENCFF002FAE, ENCFF002FAI, ENCFF051JSS, ENCFF064PBF, ENCFF074HTO, ENCFF102AMK, ENCFF119KNP, ENCFF125HRQ, ENCFF139MHN, ENCFF142CUS, ENCFF205GJI, ENCFF274WSX, ENCFF289WHW, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF310HPH, ENCFF326TQL, ENCFF344ILW, ENCFF352VWM, ENCFF363CYZ, ENCFF376MQF, ENCFF385MVU, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF482MUH, ENCFF489VZI, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF527VIY, ENCFF528CBF, ENCFF564OKH, ENCFF683RFI, ENCFF711WAC, ENCFF734FHF, ENCFF743QXJ, ENCFF761RKP, ENCFF782JNB, ENCFF796NHQ, ENCFF828WIK, ENCFF841OXD, ENCFF851ESH, ENCFF880FYC, ENCFF896IIZ, ENCFF912RLS, ENCFF922KQY, ENCFF931DDH, ENCFF931PFF, ENCFF951MOU, ENCFF991TPB, ENCFF005GQR, ENCFF013CHH, ENCFF052WUB, ENCFF060JCS, ENCFF065TCZ, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF156YWS, ENCFF222GPK, ENCFF236TUH, ENCFF245ZOR, ENCFF251WZA, ENCFF284AEN, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF355AMN, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF390NKP, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF468AKL, ENCFF484HRX, ENCFF487DYP, ENCFF510LAE, ENCFF510TTU, ENCFF519YGA, ENCFF587VDB, ENCFF604SXL, ENCFF632LPV, ENCFF636NES, ENCFF643XFK, ENCFF647TTU, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF721ASG, ENCFF721BNO, ENCFF728TXU, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF766LGO, ENCFF782NPY, ENCFF804UQS, ENCFF831ISX, ENCFF838YLT, ENCFF854MWX, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF924LPZ, ENCFF943XKB, ENCFF962FIU, ENCFF964WZW, ENCFF009AON, ENCFF019PVP, ENCFF046HWP, ENCFF053NFR, ENCFF056UGH, ENCFF073RJJ, ENCFF088SVK, ENCFF094RHV, ENCFF118YHP, ENCFF124SSE, ENCFF133KGZ, ENCFF157IFW, ENCFF158HQO, ENCFF267KZS, ENCFF278JAU, ENCFF279EVY, ENCFF296UDD, ENCFF341YZB, ENCFF357QTB, ENCFF369VAI, ENCFF380BYT, ENCFF380LXU, ENCFF387BVS, ENCFF390ZZH, ENCFF422CQE, ENCFF469JWF, ENCFF476JSK, ENCFF482VRF, ENCFF490ULA, ENCFF530DUT, ENCFF536ZVF, ENCFF541HSQ, ENCFF563FUC, ENCFF578PSU, ENCFF591WVP, ENCFF606XHA, ENCFF609WDV, ENCFF611OFH, ENCFF619SKV, ENCFF627XGF, ENCFF637CVI, ENCFF637PIP, ENCFF680WIN, ENCFF689UNV, ENCFF705CES, ENCFF723QWN, ENCFF747VYT, ENCFF749XRU, ENCFF801SNQ, ENCFF811ZQO, ENCFF819JGD, ENCFF834TQY, ENCFF838BEV, ENCFF864DTX, ENCFF877VSZ, ENCFF898CAY, ENCFF921PGH, ENCFF926FRX, ENCFF934VFW, ENCFF949QCF, ENCFF956ZKG, ENCFF970WCD, ENCFF994PPZ, ENCFF999ZYF, ENCFF254YNR, ENCFF269AST, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF517DCU, ENCFF569XGG, ENCFF670VVN, ENCFF705HQV, ENCFF723MAR, ENCFF728WJB, ENCFF803OIY, ENCFF911OIZ, ENCFF932SOZ, SRR15198217, SRR15198218, SRR15198223 chr11 12362139 12362144 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000020173.18, Cobl ENSMUST00000174874.8, NM_001282994.1 chr11 19015260 19015277 + Annotated LINE|L1|Lx7 ENSMUSG00000086025.2, 4933406G16Rik ENSMUST00000144854.2, NR_046037.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 19829339 19829340 + Predicted LTR|ERVK|RMER19B ENSMUSG00000045671.18, Spred2 DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091696, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR9178985 chr11 20039633 20039654 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000020152.8, Actr2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 22906946 22906947 - Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000051355.19, Commd1 ENSMUST00000161944.2 chr11 23470140 23470141 - Annotated LTR|ERVL-MaLR|MLT1A1 NM_001370913.1 SRR10697198, SRR10697203, SRR13142118, SRR15198221, SRR15198222, SRR15198223, SRR6904683, SRR9178985 chr11 25791232 25791235 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000032985.16, 5730522E02Rik DRR091688, DRR091689, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697197, SRR10697200, SRR10697201, SRR10697203, SRR11428468, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178982, SRR9178985 chr11 29120931 29120932 + Predicted DNA|TcMar-Tigger|MER2 ENSMUSG00000020463.16, Ppp4r3b ENCFF001RTJ, ENCFF002FAG, ENCFF884TJE, ENCFF335ZSA, ENCFF468AKL, ENCFF487DYP, ENCFF712DGP, ENCFF008XVO, ENCFF494ZWE, DRR091690, DRR091695, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR9080662, SRR9080664, SRR9080665, SRR9178980 chr11 29464522 29464523 - Predicted SINE|B2|B3A ENSMUSG00000032673.6, Prorsd1 ENCFF001RTJ, ENCFF001RTN, ENCFF002FAA, ENCFF426QFT, ENCFF369YLA, ENCFF609WRW, ENCFF737VKP, ENCFF938XTE, SRR2927113, SRR6904685 chr11 3126465 3126466 - Annotated SINE|Alu|PB1 ENSMUSG00000023764.19, Sfi1 ENSMUST00000143442.2 chr11 31495794 31495848 + Annotated LTR|ERVK|RLTR10D2 ENSMUSG00000120364.1, ENSMUSG00000120364 ENSMUST00000242806.1, ENSMUST00000247395.1, ENSMUST00000247526.1 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, ENCFF002FAA, ENCFF002FAC, ENCFF067UCQ, ENCFF134HVE, ENCFF170XMM, ENCFF236TUH, ENCFF270ERO, ENCFF304DLW, ENCFF390NKP, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF657UWH, ENCFF686KMX, ENCFF756QCA, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF939IUH, ENCFF962FIU, ENCFF964WZW, ENCFF160TQC, ENCFF199IWW, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF423TSB, ENCFF446LMP, ENCFF517DCU, ENCFF641WPY, ENCFF723MAR chr11 31619368 31619369 - Predicted LINE|RTE-BovB|MamRTE1 ENSMUSG00000044502.17, Bod1 ENCFF002DND, ENCFF102BWR, ENCFF178PMH, ENCFF452AXW, ENCFF623BKO, ENCFF885AJK, ENCFF996STG, ENCFF397MUI, ENCFF478YRJ, SRR6904685 chr11 31782670 31782684 + Predicted LTR|ERVL-MaLR|MLT1K ENSMUSG00000086335.2, Gm12107 DRR091688, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988 chr11 32529308 32529309 + Predicted SINE|MIR|MIR ENSMUSG00000020272.9, Stk10 ENCFF138TOM, ENCFF212JFB, ENCFF284OMO, ENCFF358UFZ, ENCFF486NGU, ENCFF495SQR, ENCFF565YHF, ENCFF683RFI, ENCFF745HSV, ENCFF970JWC, ENCFF013CHH, ENCFF087OKI, ENCFF106GHS, ENCFF143RTP, ENCFF162FTA, ENCFF177LXI, ENCFF219PCN, ENCFF256UWN, ENCFF286RSE, ENCFF346UBA, ENCFF363PDR, ENCFF421DHQ, ENCFF456GLS, ENCFF598PMW, ENCFF643SBQ, ENCFF644EGG, ENCFF698XCB, ENCFF765AQX, ENCFF814PHK, ENCFF840DKD, ENCFF904KCQ, ENCFF916JWW, ENCFF931NMQ, ENCFF962ZCT, ENCFF446LMP chr11 3302371 3302378 - Predicted LINE|L2|L2 ENSMUSG00000020451.18, Limk2 ENCFF002DND, ENCFF002ERW, ENCFF007RPT, ENCFF084PUC, ENCFF307VAF, ENCFF345OIF, ENCFF453XOG, ENCFF585YYC, ENCFF745HSV, ENCFF764TGO, ENCFF775RSS, ENCFF874ELO, ENCFF876MJS, ENCFF115LWP, ENCFF455DHP, ENCFF510TTU, ENCFF006JHA, ENCFF027QGO, ENCFF156ZQH, ENCFF158HQO, ENCFF353SEU, ENCFF561CZI, ENCFF696VQM, ENCFF881YOK, ENCFF960QTC, ENCFF062GNP chr11 33645876 33645895 + Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000085240.2, Gm12119 ENSMUST00000136083.2 DRR091688, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR11428470, SRR13142118, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR2927111, SRR2927112, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178987, SRR9178988 chr11 3402935 3402956 - Annotated LTR|ERVK|RMER17C2 NM_145355.5, NM_001290472.1, NM_001290473.1, NR_110959.1 ENCFF102BWR, ENCFF487DYP, DRR091692, SRR10697195, SRR10697200, SRR10697201, SRR10697203, SRR13142119, SRR13142122, SRR15198219, SRR15198222, SRR9080662, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178989, SRR9178990, SRR9178992 chr11 35725284 35725359 - Annotated LINE|RTE-BovB|MamRTE1 ENSMUSG00000018848.5, Rars ENSMUST00000018992.4, ENSMUST00000137815.2, NM_025936.3 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF082HKQ, ENCFF083BIG, ENCFF084PUC, ENCFF089PFT, ENCFF089WMB, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF221NAP, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF289WHW, ENCFF295SYY, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF319INV, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF403ORF, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF438JMT, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF453XOG, ENCFF462ABU, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489IGD, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521IDK, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF540XSD, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF570GTP, ENCFF581WWO, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF605IFN, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF683RFI, ENCFF686EWL, ENCFF696TCH, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF764EJV, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF789LUC, ENCFF793CWJ, ENCFF793STU, ENCFF794FBC, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF868XLZ, ENCFF874ELO, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF883UYA, ENCFF884TJE, ENCFF886XAI, ENCFF896IIZ, ENCFF896MQK, ENCFF906FNQ, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF925ONP, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF962LFN, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF994BOT, ENCFF996STG, ENCFF013CHH, ENCFF013HYW, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF251WZA, ENCFF261ZZF, ENCFF269WEZ, ENCFF270ERO, ENCFF274ESJ, ENCFF284AEN, ENCFF304DLW, ENCFF308FEA, ENCFF330FNX, ENCFF339MSB, ENCFF345BBC, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF369YLA, ENCFF377LAC, ENCFF391UFN, ENCFF394BDJ, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF468AKL, ENCFF478KOR, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF632LPV, ENCFF643XFK, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF697AST, ENCFF712DGP, ENCFF714CKE, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF826RUZ, ENCFF831ISX, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF868WEJ, ENCFF912MUD, ENCFF914YDJ, ENCFF923VUD, ENCFF933KQV, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF964WZW, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF027GCQ, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF041PJP, ENCFF043DTH, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF061WTN, ENCFF064VAD, ENCFF065UBR, ENCFF065ZIE, ENCFF066MTU, ENCFF066UDR, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF077YZF, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF087XKQ, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF090EUZ, ENCFF094RHV, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF117ZMM, ENCFF118PQI, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF127DCC, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF134PXJ, ENCFF136TYP, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF167EHX, ENCFF167GWU, ENCFF169JOQ, ENCFF170KWW, ENCFF172DMS, ENCFF174EGP, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF185TRT, ENCFF187BHR, ENCFF189BIW, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF197TJB, ENCFF199AAD, ENCFF201IQS, ENCFF203EWG, ENCFF205CDI, ENCFF207RVA, ENCFF208BJY, ENCFF209RRO, ENCFF210BVU, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF243LBQ, ENCFF243TPB, ENCFF248XZC, ENCFF249LSC, ENCFF254TFB, ENCFF255ESE, ENCFF255XDN, ENCFF258WLS, ENCFF260BJB, ENCFF260UQJ, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332IRR, ENCFF332RWQ, ENCFF334XFS, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346UBA, ENCFF347EUO, ENCFF348RRM, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF366IEQ, ENCFF369VAI, ENCFF371ZDG, ENCFF374VAZ, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF383AJS, ENCFF386CRY, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF414IHO, ENCFF417INY, ENCFF417OEG, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF427YDU, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF437QAE, ENCFF439BEV, ENCFF440IAL, ENCFF443URE, ENCFF450CUC, ENCFF453MPR, ENCFF454DOT, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF507VMW, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF530DUT, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZFC, ENCFF536ZVF, ENCFF538TFM, ENCFF538ZTW, ENCFF541HSQ, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549IDH, ENCFF552KEA, ENCFF552LXG, ENCFF558UDY, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF565YJQ, ENCFF566HCI, ENCFF569ELL, ENCFF572JDP, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF581RIR, ENCFF584OOK, ENCFF584ZUK, ENCFF587HBC, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF598BFX, ENCFF598LJF, ENCFF598WAL, ENCFF601JTS, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF633QXI, ENCFF635XED, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF661TOM, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF673SLO, ENCFF678CRA, ENCFF680WIN, ENCFF681EEO, ENCFF685FUZ, ENCFF685GDB, ENCFF689RQK, ENCFF689UNV, ENCFF689ZLL, ENCFF691DJE, ENCFF693POR, ENCFF694EPZ, ENCFF695XIY, ENCFF696VQM, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF753HNF, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF759WDO, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF779MMO, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF794MMU, ENCFF796TQV, ENCFF801SNQ, ENCFF804EWD, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF818ZJQ, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF829HAB, ENCFF829WND, ENCFF830CBI, ENCFF832FTK, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF886UAF, ENCFF894COY, ENCFF896XAZ, ENCFF898CAY, ENCFF900AIQ, ENCFF900LFN, ENCFF901KUE, ENCFF903KDM, ENCFF906CJJ, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF931NMQ, ENCFF932XKS, ENCFF934VFW, ENCFF938CNS, ENCFF938XTE, ENCFF939UBM, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF952EQQ, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974KKD, ENCFF974XWJ, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF998BIQ, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF186VNL, ENCFF242SVY, ENCFF248ELC, ENCFF260KJY, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF477YHR, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF517DCU, ENCFF555BQD, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF670VVN, ENCFF705HQV, ENCFF716YKR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF783KGQ, ENCFF827NYZ, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF932SOZ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178206, SRR5643200, SRR6338004, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 36576328 36576329 - Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000049336.17, Tenm2 ENCFF013CHH, ENCFF156YWS, ENCFF308FEA, ENCFF348FTH, ENCFF408NBX, ENCFF487DYP, ENCFF500QZK, ENCFF572TOH, ENCFF587VDB, ENCFF721BNO, ENCFF747XPP, ENCFF860XMD, ENCFF510AYI, ENCFF525QIM, ENCFF749STK, ENCFF911OIZ chr11 3744649 3744650 - Predicted LINE|L1|L1_Mur3 ENSMUSG00000020435.18, Osbp2 SRR2089605, SRR2089617, SRR2089639, SRR2089649 chr11 39281051 39281052 - Annotated LTR|ERVK|RMER17B NR_126439.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091697, DRR091698, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228 chr11 40395261 40395262 + Predicted LTR|ERVK|RMER19B ENSMUSG00000081097.2, Gm12135 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr11 43201914 43201915 - Annotated DNA|hAT-Charlie|MER5A ENSMUSG00000086791.2, Gm12147 ENSMUST00000144024.2 chr11 43320963 43320987 - Predicted LINE|L1|L1MdV_III ENSMUSG00000020415.17, Pttg1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991 chr11 43327181 43327187 + Predicted LTR|ERVK|RMER4B ENSMUSG00000020409.11, Slu7 ENCFF102BWR, ENCFF107XGE, ENCFF327MSM, ENCFF367BBB, ENCFF575RUC, ENCFF764EJV, ENCFF005GQR, ENCFF013CHH, ENCFF060JCS, ENCFF065LOT, ENCFF067UCQ, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF148XRK, ENCFF222GPK, ENCFF236TUH, ENCFF245ZOR, ENCFF251WZA, ENCFF269SRJ, ENCFF339MSB, ENCFF355AMN, ENCFF390NKP, ENCFF394BDJ, ENCFF444YCN, ENCFF454ZUS, ENCFF467LJD, ENCFF478KOR, ENCFF510LAE, ENCFF516BTG, ENCFF519YGA, ENCFF533DWD, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF642YTY, ENCFF647TTU, ENCFF654AEJ, ENCFF657UWH, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF714CKE, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF754TOT, ENCFF782NPY, ENCFF785TEQ, ENCFF804UQS, ENCFF809FPA, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF939IUH, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF975NCY, ENCFF978EQI, ENCFF904KCQ, ENCFF075EMK, ENCFF119IHT, ENCFF199IWW, ENCFF242SVY, ENCFF254YNR, ENCFF269AST, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF361MLD, ENCFF399XUL, ENCFF423TSB, ENCFF454JTI, ENCFF499CDP, ENCFF517DCU, ENCFF626KIV, ENCFF641WPY, ENCFF667KKO, ENCFF716YKR, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF847LGC, ENCFF888IIL, ENCFF932SOZ, ENCFF970VKL, DRR091693, SRR11428469, SRR15198218, SRR15198219, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR6904683 chr11 43471942 43471968 - Annotated SINE|B4|B4A ENSMUSG00000085239.2, Gm12150 ENSMUST00000130874.2 DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR9178984, SRR9178989, SRR9178990, SRR9178992 chr11 45644438 45644439 - Annotated LTR|ERV1|RMER2 ENSMUSG00000120703.1, ENSMUSG00000120703 ENSMUST00000245312.1 chr11 45765899 45765938 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000006169.21, Clint1 ENCFF519IZA, ENCFF705JRV, ENCFF108JLQ, ENCFF136TYP, ENCFF221ZQB, ENCFF277JGD, ENCFF296ITI, ENCFF308WGP, ENCFF310WDZ, ENCFF328TJH, ENCFF331YYO, ENCFF376PQU, ENCFF399TOF, ENCFF399YLV, ENCFF513BRJ, ENCFF527XBQ, ENCFF635XED, ENCFF724VJN, ENCFF794MMU, ENCFF817HZQ, ENCFF896XAZ, ENCFF903KDM chr11 45770724 45770748 + Predicted LINE|L1|Lx ENSMUSG00000006169.21, Clint1 ENCFF086ZMV, ENCFF092YWY, ENCFF102AMK, ENCFF138QRF, ENCFF262WAE, ENCFF308LTO, ENCFF415KCJ, ENCFF439OFV, ENCFF450WAV, ENCFF462ABU, ENCFF521UGJ, ENCFF525POD, ENCFF560YXX, ENCFF622NXP, ENCFF639RWJ, ENCFF641QXI, ENCFF643VPC, ENCFF671ERF, ENCFF691URX, ENCFF698LQF, ENCFF704GEB, ENCFF707QJV, ENCFF764ZUI, ENCFF773VFS, ENCFF812CUD, ENCFF828WIK, ENCFF896MQK, ENCFF017LOD, ENCFF455DHP, ENCFF532UKS, ENCFF935LAF, ENCFF009AVK, ENCFF052RNG, ENCFF106RLX, ENCFF127KHN, ENCFF148BPZ, ENCFF149JXW, ENCFF162FTA, ENCFF209RRO, ENCFF220GKL, ENCFF249LSC, ENCFF260UQJ, ENCFF275TCB, ENCFF346NGU, ENCFF346UBA, ENCFF397ZQU, ENCFF417INY, ENCFF438ROC, ENCFF439BEV, ENCFF462HZM, ENCFF477MBL, ENCFF484PQK, ENCFF486GBM, ENCFF591WVP, ENCFF598PMW, ENCFF618PVF, ENCFF632HDE, ENCFF655KBW, ENCFF667RGF, ENCFF685FUZ, ENCFF687GPO, ENCFF687STH, ENCFF717GIT, ENCFF740WXS, ENCFF758BKM, ENCFF765AQX, ENCFF779MMO, ENCFF818ZJQ, ENCFF856UMI, ENCFF894COY, ENCFF936DQW, ENCFF949QCF, ENCFF951PCM, ENCFF971DTR, ENCFF974XWJ, ENCFF996WVL, ENCFF997QQG, ENCFF014SLC, ENCFF494ZWE, ENCFF574YMK, ENCFF582WGH, ENCFF653QJY, SRR13142120 chr11 45948946 45948947 - Predicted LTR|ERV1|LTR37B ENSMUSG00000069899.4, Gm12166 SRR2089604, SRR2089607, SRR2089636, SRR2089639, SRR2089648, SRR2089650, SRR2089651 chr11 46493710 46493711 - Predicted LINE|L1|L1MdA_I ENSMUSG00000081713.2, Gm12170 SRR2089648, SRR2089649, SRR2089651 chr11 46597885 46597931 - Annotated LTR|ERV1|RLTR14-int ENSMUSG00000040413.16, Timd2 ENSMUST00000055102.13, ENSMUST00000125008.2, NM_134249.5 ENCFF001RTD, ENCFF001RTN, ENCFF223BXU, ENCFF608LAL, ENCFF683CWD, ENCFF838YLT chr11 4734831 4734832 - Predicted LINE|L2|L2d2 ENSMUSG00000009073.17, Nf2 ENCFF107XGE, ENCFF160HKC, ENCFF207DLW, ENCFF279BVM, ENCFF358UFZ, ENCFF385GUJ, ENCFF605IFN, ENCFF884DLS, ENCFF994BOT, ENCFF260BJB, ENCFF346NGU, ENCFF899EJT chr11 47629046 47629047 - Predicted LINE|L1|L1MdFanc_II ENSMUSG00000020354.16, Sgcd SRR2089604, SRR2089605, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646 chr11 48825393 48825394 - Predicted LINE|L1|Lx2A ENSMUSG00000048852.14, Gm12185 ENCFF040EEJ, ENCFF321BMO, ENCFF489VZI, ENCFF260UQJ, ENCFF277JGD, ENCFF698WQO, ENCFF750IZJ, ENCFF903KDM chr11 49272970 49272971 + Predicted LTR|ERVK|RLTR10C ENSMUSG00000107573.3, Or2y1d DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178990 chr11 49273029 49273033 + Predicted LTR|ERVK|RLTR10C ENSMUSG00000107573.3, Or2y1d DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178990 chr11 49605851 49605852 - Predicted LTR|ERVL-MaLR|MLT1K ENSMUSG00000020362.14, Cnot6 DRR091694, SRR10697196, SRR11428469, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR2927111, SRR2927112, SRR9178980, SRR9178982, SRR9178985, SRR9178986 chr11 4970568 4970587 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000009090.18, Ap1b1 ENCFF040EEJ, ENCFF074HUJ, ENCFF083BIG, ENCFF092YWY, ENCFF106RGV, ENCFF107XGE, ENCFF117BGT, ENCFF162UVS, ENCFF168WHQ, ENCFF192NVI, ENCFF198NQV, ENCFF221JNS, ENCFF262WAE, ENCFF284OMO, ENCFF307VAF, ENCFF313ERY, ENCFF334RGJ, ENCFF367BBB, ENCFF385MVU, ENCFF401HCS, ENCFF443PSO, ENCFF462ABU, ENCFF489IGD, ENCFF533NLR, ENCFF544BEF, ENCFF560YXX, ENCFF621PKT, ENCFF639RWJ, ENCFF704GEB, ENCFF723KAG, ENCFF723QIC, ENCFF727WWV, ENCFF764TGO, ENCFF784LWT, ENCFF787LWL, ENCFF795DLS, ENCFF823PZU, ENCFF828WIK, ENCFF858CTQ, ENCFF881TID, ENCFF881UBL, ENCFF902GVX, ENCFF910ESY, ENCFF913CFN, ENCFF917RNE, ENCFF924VRI, ENCFF934ULS, ENCFF946AGD, ENCFF962LFN, ENCFF359GCY, ENCFF860XMD, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF024CUG, ENCFF037LEJ, ENCFF045YRV, ENCFF066MTU, ENCFF077CYB, ENCFF087XKQ, ENCFF089SWU, ENCFF108JLQ, ENCFF127DCC, ENCFF141YUD, ENCFF209LBA, ENCFF210BVU, ENCFF228CMT, ENCFF242MZE, ENCFF254TFB, ENCFF267VBU, ENCFF277JGD, ENCFF297PPT, ENCFF399TOF, ENCFF466RIS, ENCFF477MBL, ENCFF486GBM, ENCFF507VMW, ENCFF517BAY, ENCFF529LEZ, ENCFF531JWM, ENCFF537DSI, ENCFF549IDH, ENCFF573WSG, ENCFF580KHN, ENCFF598BFX, ENCFF611QZE, ENCFF618PVF, ENCFF643SBQ, ENCFF667RGF, ENCFF673SLO, ENCFF687GPO, ENCFF696TTO, ENCFF696VQM, ENCFF755REI, ENCFF759HJA, ENCFF765AQX, ENCFF772QLP, ENCFF794MMU, ENCFF806MTS, ENCFF817HZQ, ENCFF817NCH, ENCFF825JNK, ENCFF840DKD, ENCFF847IGW, ENCFF856UMI, ENCFF903KDM, ENCFF917KUH, ENCFF937KFC, ENCFF946LMX, ENCFF951PCM, ENCFF952FJN, ENCFF953FGT, ENCFF956RCJ, ENCFF996WVL, ENCFF062GNP, ENCFF178HDG, ENCFF494ZWE, ENCFF499GDC, ENCFF720MPJ, ENCFF904RJF chr11 4970640 4970677 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000009090.18, Ap1b1 ENCFF040EEJ, ENCFF074HUJ, ENCFF083BIG, ENCFF092YWY, ENCFF102BWR, ENCFF106RGV, ENCFF107XGE, ENCFF117BGT, ENCFF162UVS, ENCFF168WHQ, ENCFF192NVI, ENCFF198NQV, ENCFF221JNS, ENCFF262WAE, ENCFF284OMO, ENCFF307VAF, ENCFF313ERY, ENCFF334RGJ, ENCFF367BBB, ENCFF385MVU, ENCFF401HCS, ENCFF443PSO, ENCFF489IGD, ENCFF533NLR, ENCFF544BEF, ENCFF560YXX, ENCFF621PKT, ENCFF639RWJ, ENCFF704GEB, ENCFF723KAG, ENCFF723QIC, ENCFF727WWV, ENCFF764TGO, ENCFF771YNG, ENCFF784LWT, ENCFF787LWL, ENCFF795DLS, ENCFF823PZU, ENCFF828WIK, ENCFF858CTQ, ENCFF881TID, ENCFF881UBL, ENCFF902GVX, ENCFF910ESY, ENCFF913CFN, ENCFF917RNE, ENCFF924VRI, ENCFF934ULS, ENCFF946AGD, ENCFF962LFN, ENCFF359GCY, ENCFF712DGP, ENCFF860XMD, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF024CUG, ENCFF027GCQ, ENCFF037LEJ, ENCFF045YRV, ENCFF066MTU, ENCFF077CYB, ENCFF087XKQ, ENCFF089SWU, ENCFF108JLQ, ENCFF127DCC, ENCFF141YUD, ENCFF155GUC, ENCFF209LBA, ENCFF210BVU, ENCFF228CMT, ENCFF242MZE, ENCFF254TFB, ENCFF267VBU, ENCFF277JGD, ENCFF297PPT, ENCFF357AGP, ENCFF399TOF, ENCFF466RIS, ENCFF477MBL, ENCFF486GBM, ENCFF507VMW, ENCFF507WIK, ENCFF517BAY, ENCFF529LEZ, ENCFF531JWM, ENCFF537DSI, ENCFF549IDH, ENCFF558UDY, ENCFF561CZI, ENCFF573WSG, ENCFF580KHN, ENCFF598BFX, ENCFF611QZE, ENCFF618PVF, ENCFF643SBQ, ENCFF667RGF, ENCFF673SLO, ENCFF683WFA, ENCFF687GPO, ENCFF696TTO, ENCFF696VQM, ENCFF755REI, ENCFF759HJA, ENCFF765AQX, ENCFF772QLP, ENCFF794MMU, ENCFF804EWD, ENCFF806MTS, ENCFF817HZQ, ENCFF817NCH, ENCFF825JNK, ENCFF840DKD, ENCFF847IGW, ENCFF856UMI, ENCFF903KDM, ENCFF917KUH, ENCFF937KFC, ENCFF938CNS, ENCFF946LMX, ENCFF951PCM, ENCFF952FJN, ENCFF953FGT, ENCFF956RCJ, ENCFF996WVL, ENCFF062GNP, ENCFF178HDG, ENCFF494ZWE, ENCFF499GDC, ENCFF720MPJ, ENCFF904RJF chr11 51111244 51111275 - Annotated LTR|ERVK|RLTR31B2 ENSMUSG00000086646.9, Platr20 ENSMUST00000243483.1, ENSMUST00000242099.1, ENSMUST00000241476.1, ENSMUST00000243048.1, ENSMUST00000243083.1, ENSMUST00000143209.8, ENSMUST00000244243.1, ENSMUST00000243322.1, NR_110444.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF089PFT, ENCFF696TCH, DRR091688, DRR091689, DRR091690, DRR091691, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR11428470, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178978 chr11 53474643 53474644 + Predicted LTR|ERVK|RLTR25B ENSMUSG00000018395.20, Kif3a ENCFF291LRG, ENCFF450WAV, ENCFF098TCZ, ENCFF301VMF, ENCFF453MPR, ENCFF717GIT, ENCFF881YOK, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6904684, SRR6904685 chr11 53738564 53738565 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000018899.18, Irf1 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr11 5754817 5754818 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000020475.4, Pgam2 ENCFF005GQR, ENCFF065TCZ, ENCFF148XRK, ENCFF355AMN, ENCFF448TTG, ENCFF647TTU, ENCFF721BNO, ENCFF733MXU, ENCFF831ISX, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL chr11 5768582 5768583 - Annotated LTR|ERVK|RLTR19 ENSMUSG00000080904.2, Gm11966 ENSMUST00000119907.2 chr11 58062181 58062193 + Predicted LTR|ERV1|RLTR24 ENSMUSG00000020514.9, Mrpl22 DRR091689, DRR091690, DRR091691, DRR091693, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697196, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428470, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR6904683, SRR9080666, SRR9178977, SRR9178979, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178992 chr11 58756792 58756793 + Predicted SINE|B4|ID_B1 ENSMUSG00000085744.2, Gm12259 ENSMUST00000138391.2 DRR091688, DRR091689, DRR091690, DRR091693, SRR11428467, SRR15198217, SRR15198219, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228 chr11 59729120 59729121 - Predicted LINE|L1|L1ME4b ENSMUSG00000019373.12, Cops3 SRR10697196, SRR10697201, SRR10697202, SRR5643190 chr11 60308083 60308327 + Annotated LTR|ERVK|RLTR20C1_MM ENSMUSG00000018415.15, Gid4 ENSMUST00000070681.7 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002EZU, ENCFF002EZY, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF104LLO, ENCFF116MYR, ENCFF119KNP, ENCFF121OLG, ENCFF126HTW, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF179WPT, ENCFF186RYS, ENCFF189WYV, ENCFF214IUN, ENCFF218HNK, ENCFF221NAP, ENCFF261OTH, ENCFF262URV, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF310HPH, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF363CYZ, ENCFF371VGE, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF404PYQ, ENCFF421SNO, ENCFF426QFT, ENCFF445BBH, ENCFF470MXU, ENCFF478FDA, ENCFF482MUH, ENCFF495YGN, ENCFF504ULZ, ENCFF514JOV, ENCFF521IDK, ENCFF527VIY, ENCFF528CBF, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF564YPB, ENCFF589REP, ENCFF593RAV, ENCFF595GFM, ENCFF623BKO, ENCFF625JLB, ENCFF670CXH, ENCFF683RFI, ENCFF696TCH, ENCFF725RXU, ENCFF743QXJ, ENCFF761RKP, ENCFF775BPV, ENCFF782JNB, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF813GGJ, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF878SQO, ENCFF880FYC, ENCFF912RLS, ENCFF931PFF, ENCFF933UPG, ENCFF937GBW, ENCFF991TPB, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF233IFH, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF924LPZ, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF023TPS, ENCFF037IZV, ENCFF041PJP, ENCFF050CMF, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF065ZIE, ENCFF073RJJ, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF103SQR, ENCFF116QKZ, ENCFF124SSE, ENCFF128CYW, ENCFF133KGZ, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF187BHR, ENCFF189BIW, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF235HER, ENCFF243LBQ, ENCFF243TPB, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF278JAU, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302KQL, ENCFF302MXO, ENCFF313IFI, ENCFF315OFF, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF346HDC, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF380BYT, ENCFF380LXU, ENCFF397MUI, ENCFF406LFV, ENCFF417OEG, ENCFF426ETE, ENCFF426FAF, ENCFF430ERW, ENCFF478BEL, ENCFF482VRF, ENCFF492HRC, ENCFF505PJK, ENCFF512XKX, ENCFF517EJZ, ENCFF536ZVF, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF578PSU, ENCFF584OOK, ENCFF596INO, ENCFF598WAL, ENCFF606XHA, ENCFF609WRW, ENCFF611OFH, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF644GYU, ENCFF656DRS, ENCFF673GRZ, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF727EPG, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF765UBL, ENCFF766UJI, ENCFF780UQU, ENCFF801SNQ, ENCFF811ZQO, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF864DTX, ENCFF869DVY, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF926FRX, ENCFF952LUC, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF959CWA, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF994PPZ, ENCFF008XVO, ENCFF014SLC, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF667KKO, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091691, DRR091692, DRR091695, DRR091698, DRR091699, SRR10697197, SRR10697199, SRR11428467, SRR11428469, SRR11428470, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9178977, SRR9178979, SRR9178981 chr11 60693495 60693496 - Annotated LTR|ERVK|RMER6B ENSMUSG00000020534.15, Shmt1 ENSMUST00000173698.2 chr11 60805575 60805576 - Annotated LINE|L1|L1ME2 ENSMUSG00000018931.4, Natd1 ENSMUST00000143800.2 chr11 61696973 61696983 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000004798.15, Ulk2 ENCFF221JIC, ENCFF519IZA, ENCFF727WWV, ENCFF755IDE, ENCFF858CTQ, ENCFF883UYA, ENCFF972IVS, ENCFF500QZK, ENCFF012HVN, ENCFF037LEJ, ENCFF136TYP, ENCFF162FTA, ENCFF242MZE, ENCFF277JGD, ENCFF538ZTW, ENCFF632HDE, ENCFF663SPA, ENCFF663TDQ, ENCFF696XZL, ENCFF735BVR, ENCFF746ZCS, ENCFF786BUI, ENCFF881DTW, ENCFF937KFC, ENCFF962ZCT chr11 61790576 61790604 - Predicted SINE|B2|B3 ENSMUSG00000047804.16, Akap10 ENCFF107XGE, SRR2089610, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089637, SRR2089639, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr11 61880988 61880998 + Predicted LTR|ERVL-MaLR|MLT1E1A ENSMUSG00000042331.14, Specc1 DRR091688, DRR091689, DRR091690, DRR091693, DRR091694, DRR091695, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 62536098 62536099 - Predicted SINE|MIR|MIRc ENSMUSG00000046417.15, Lrrc75a SRR2089622, SRR2089623, SRR2089643, SRR2089645 chr11 62824287 62824288 - Predicted SINE|B4|B4A ENSMUSG00000086677.2, Tvp23bos SRR2089621, SRR2089622, SRR2089632, SRR2089642 chr11 63888775 63888777 + Predicted LTR|ERVL|MLT2F ENSMUSG00000086359.2, 9630013K17Rik SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr11 63898764 63898765 + Predicted LINE|L1|L1MdF_V ENSMUSG00000086359.2, 9630013K17Rik SRR2089615, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr11 63988338 63988339 + Predicted LINE|L1|L1MC ENSMUSG00000087497.9, 2810001G20Rik SRR2089613, SRR2089617, SRR2089618, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089650 chr11 64966036 64966037 - Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000033389.17, Arhgap44 ENCFF696TCH, ENCFF156YWS, ENCFF766LGO, ENCFF912MUD, ENCFF978EQI, ENCFF555BQD chr11 6510183 6510184 + Annotated DNA|TcMar-Tigger|Tigger5a_Glire ENSMUSG00000000378.16, Ccm2 ENSMUST00000109722.9, NM_001190344.1 chr11 65636663 65636682 - Annotated LINE|CR1|L3 ENSMUSG00000033352.12, Map2k4 ENSMUST00000138093.2, NM_001362739.1, NM_001362740.1 ENCFF005GQR, ENCFF013CHH, ENCFF065LOT, ENCFF199IRM, ENCFF222GPK, ENCFF247QZW, ENCFF269SRJ, ENCFF296VFB, ENCFF326UXM, ENCFF335ZSA, ENCFF355AMN, ENCFF385UBP, ENCFF408NBX, ENCFF448TTG, ENCFF510TTU, ENCFF595WXV, ENCFF636NES, ENCFF654AEJ, ENCFF733MXU, ENCFF809FPA, ENCFF822PGJ, ENCFF914YDJ, ENCFF967NOO, ENCFF075EMK, ENCFF119IHT, ENCFF399XUL, ENCFF670VVN chr11 66063630 66063657 + Predicted LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000084967.2, Gm12296 SRR2089604, SRR2089607, SRR2089610, SRR2089612, SRR2089613, SRR2089615, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr11 68161704 68161705 - Annotated DNA|TcMar-Tigger|X12_DNA ENSMUSG00000084993.2, Gm12305 ENSMUST00000151817.2 chr11 68903277 68903330 - Annotated LTR|ERVK|RLTR34D_MM ENSMUSG00000120312.1, ENSMUSG00000120312 ENSMUST00000242498.1, ENSMUST00000246150.1, ENSMUST00000246795.1, ENSMUST00000245626.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF059IQN, ENCFF089PFT, ENCFF091WMS, ENCFF102BWR, ENCFF104LLO, ENCFF116MYR, ENCFF142CUS, ENCFF178ZVU, ENCFF179WPT, ENCFF189WYV, ENCFF297BEX, ENCFF326TQL, ENCFF344ILW, ENCFF345OIF, ENCFF437AJW, ENCFF489IGD, ENCFF514BEA, ENCFF670CXH, ENCFF696TCH, ENCFF851ESH, ENCFF878SQO, ENCFF005GQR, ENCFF017LOD, ENCFF033ZUH, ENCFF052WUB, ENCFF065LOT, ENCFF065TCZ, ENCFF101BDM, ENCFF134HVE, ENCFF148XRK, ENCFF199IRM, ENCFF251WZA, ENCFF296VFB, ENCFF308FEA, ENCFF355AMN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF454ZUS, ENCFF478KOR, ENCFF510LAE, ENCFF510TTU, ENCFF521NCL, ENCFF533DWD, ENCFF572TOH, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF654AEJ, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF803VZZ, ENCFF845NXM, ENCFF855FCX, ENCFF860XMD, ENCFF912MUD, ENCFF923VUD, ENCFF933MOZ, ENCFF967NOO, ENCFF023TPS, ENCFF037IZV, ENCFF049SEE, ENCFF053NFR, ENCFF083IRL, ENCFF088SVK, ENCFF094RHV, ENCFF120SMK, ENCFF150HVU, ENCFF156XMZ, ENCFF205CDI, ENCFF267KZS, ENCFF315OFF, ENCFF332IRR, ENCFF338LFG, ENCFF357QTB, ENCFF369VAI, ENCFF390ZZH, ENCFF406NLL, ENCFF430ERW, ENCFF476JSK, ENCFF536ZVF, ENCFF584OOK, ENCFF598WAL, ENCFF689RQK, ENCFF689UNV, ENCFF712BKP, ENCFF743NNG, ENCFF751QWY, ENCFF801SNQ, ENCFF811ZQO, ENCFF863LMG, ENCFF869DVY, ENCFF970LRH, ENCFF994PPZ, ENCFF008XVO, ENCFF075EMK, ENCFF242SVY, ENCFF269AST, ENCFF342GAL, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF592WZB, ENCFF641WPY, ENCFF667KKO, ENCFF749STK, ENCFF847LGC, ENCFF911OIZ, ENCFF932SOZ, DRR091693, SRR15198217, SRR15198218, SRR15198221, SRR15198224, SRR15198225, SRR15198226, SRR2040601, SRR2927111 chr11 68906685 68906848 + Annotated SINE|Alu|B1_Mur1 ENSMUSG00000020898.19, Ctc1 ENSMUST00000021278.14, ENSMUST00000135611.8, ENSMUST00000161455.8, NM_001281464.1, NM_001281465.1, NM_001143790.1, NM_001013256.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF022FSI, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF076CCZ, ENCFF089PFT, ENCFF090USB, ENCFF092YWY, ENCFF104LLO, ENCFF116MYR, ENCFF119KNP, ENCFF142CUS, ENCFF163LPQ, ENCFF178PMH, ENCFF184EAT, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF262URV, ENCFF274WSX, ENCFF326TQL, ENCFF344ILW, ENCFF345OIF, ENCFF348VIH, ENCFF351JWR, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF437AJW, ENCFF453XOG, ENCFF472YPG, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521IDK, ENCFF560YXX, ENCFF564YPB, ENCFF589REP, ENCFF593RAV, ENCFF595GFM, ENCFF623BKO, ENCFF670CXH, ENCFF696TCH, ENCFF761RKP, ENCFF775RSS, ENCFF796NHQ, ENCFF808XFI, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF878SQO, ENCFF922KQY, ENCFF937GBW, ENCFF989HJD, ENCFF005GQR, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF115LWP, ENCFF148XRK, ENCFF151YNV, ENCFF173IVH, ENCFF199IRM, ENCFF222GPK, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF269SRJ, ENCFF270ERO, ENCFF271OHB, ENCFF296VFB, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF408NBX, ENCFF429BQZ, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF510LAE, ENCFF510TTU, ENCFF519YGA, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF592GVA, ENCFF595WXV, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF657UWH, ENCFF667SYQ, ENCFF694NRG, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF747XPP, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF785TEQ, ENCFF804UQS, ENCFF826RUZ, ENCFF840XYZ, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF912MUD, ENCFF914YDJ, ENCFF923VUD, ENCFF939IUH, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF970VKB, ENCFF002SZY, ENCFF009AON, ENCFF041PJP, ENCFF046HWP, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF083IRL, ENCFF120SMK, ENCFF131VEF, ENCFF148BPZ, ENCFF156ZQH, ENCFF163DKN, ENCFF166UTY, ENCFF205CDI, ENCFF267KZS, ENCFF278JAU, ENCFF286GUQ, ENCFF291SCS, ENCFF302MXO, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF387BVS, ENCFF417OEG, ENCFF426ETE, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF490ULA, ENCFF505PJK, ENCFF512XKX, ENCFF530DUT, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF576EOD, ENCFF578PSU, ENCFF591WVP, ENCFF598WAL, ENCFF606XHA, ENCFF609WRW, ENCFF615ULR, ENCFF619SKV, ENCFF637PIP, ENCFF705CES, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF743NNG, ENCFF749XRU, ENCFF751QWY, ENCFF780UQU, ENCFF794MMU, ENCFF809QBQ, ENCFF819JGD, ENCFF834TQY, ENCFF838BEV, ENCFF877VSZ, ENCFF903KDM, ENCFF921PGH, ENCFF934VFW, ENCFF938CNS, ENCFF955YCX, ENCFF974KKD, ENCFF994PPZ, ENCFF999ZYF, ENCFF008XVO, ENCFF075EMK, ENCFF119IHT, ENCFF197NCG, ENCFF199IWW, ENCFF269AST, ENCFF319SDE, ENCFF361MLD, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF626KIV, ENCFF670VVN, ENCFF728WJB, ENCFF749STK, ENCFF783KGQ, ENCFF803OIY, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 68960706 68960707 + Predicted LINE|L2|L2a ENSMUSG00000020895.15, Tmem107 ENCFF013CHH, ENCFF302KQL, SRR10697203, SRR15198219, SRR15198220, SRR15198223, SRR2040601, SRR5643192, SRR9080666, SRR9178978, SRR9178988, SRR9178991 chr11 69184976 69184995 + Annotated SINE|Alu|PB1 ENSMUSG00000087003.2, Cntrobos ENSMUST00000132834.2 DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091697, DRR091698, SRR11428469, SRR13142119, SRR15198220, SRR15198221, SRR15198222, SRR2040601, SRR9080662 chr11 69553773 69553774 - Predicted LINE|L2|L2 ENSMUSG00000018761.15, Mpdu1 ENCFF552NWL, ENCFF795DLS, ENCFF896IIZ, ENCFF951MOU, ENCFF359GCY, ENCFF014CMK, ENCFF194DAO, ENCFF237JCE, ENCFF320CXH, ENCFF406NLL, ENCFF454DOT, ENCFF598LJF, ENCFF764AQK, ENCFF160TQC chr11 69586634 69587009 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000018752.20, ENSMUSG00000097328.8, Tnfsfm13, Tnfsf12 ENSMUST00000180587.8, ENSMUST00000174159.8, ENSMUST00000108649.3, ENSMUST00000181810.8, NM_001034097.2, NM_001159503.2, NM_011614.3 ENCFF001NDA, ENCFF001RTD, ENCFF001RTN, ENCFF002EZU, ENCFF002EZW, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF083BIG, ENCFF083CUR, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF162UVS, ENCFF163LPQ, ENCFF168WHQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF269UZL, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF289WHW, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF348VIH, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF422ATU, ENCFF432ZLQ, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF453XOG, ENCFF462ABU, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF486NGU, ENCFF489VZI, ENCFF491XRO, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521IDK, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF544BEF, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570GTP, ENCFF581WWO, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF605IFN, ENCFF608NVM, ENCFF623BKO, ENCFF625JLB, ENCFF643VPC, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF683RFI, ENCFF696TCH, ENCFF704GEB, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF764EJV, ENCFF764TGO, ENCFF771LLL, ENCFF771YNG, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF787LWL, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF865WQE, ENCFF868XLZ, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF883UYA, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF906FNQ, ENCFF907HVO, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF922KQY, ENCFF925ONP, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF951MOU, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269WEZ, ENCFF270ERO, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF330FNX, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF596QWT, ENCFF604SXL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF818BAS, ENCFF826RUZ, ENCFF829RHM, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF002ZAX, ENCFF004AEL, ENCFF009AON, ENCFF012HVN, ENCFF012KPC, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF023TPS, ENCFF027GBM, ENCFF027GCQ, ENCFF030IFE, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF039DES, ENCFF041PJP, ENCFF043DTH, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057MDU, ENCFF061WTN, ENCFF065ZIE, ENCFF066MTU, ENCFF066UDR, ENCFF068CQU, ENCFF068KDU, ENCFF070YMI, ENCFF073RJJ, ENCFF077YZF, ENCFF080BTV, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF095NMU, ENCFF103SQR, ENCFF106GHS, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF117ZMM, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF136DUH, ENCFF136TYP, ENCFF148BPZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF167GWU, ENCFF170KWW, ENCFF172DMS, ENCFF174EGP, ENCFF177SGB, ENCFF178ZXW, ENCFF184ALY, ENCFF185TRT, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF207HZS, ENCFF207RVA, ENCFF208BJY, ENCFF229CPV, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF243LBQ, ENCFF243TPB, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF258WLS, ENCFF264PYB, ENCFF267KZS, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF306FQJ, ENCFF306OWL, ENCFF310HAL, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF332IRR, ENCFF332RWQ, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF347EUO, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF369VAI, ENCFF371ZDG, ENCFF374VAZ, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF380LXU, ENCFF382VCK, ENCFF386HCR, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399YLV, ENCFF403RPK, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF414IHO, ENCFF417OEG, ENCFF421DHQ, ENCFF422CQE, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF427YDU, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF437ZSM, ENCFF439BEV, ENCFF443URE, ENCFF450CUC, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF466RIS, ENCFF469JWF, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF485GFE, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF517BAY, ENCFF517EJZ, ENCFF519AKK, ENCFF524PAV, ENCFF529LEZ, ENCFF530DUT, ENCFF533ZIO, ENCFF536ZVF, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF552LXG, ENCFF558UDY, ENCFF561CZI, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF585CYT, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF619SKV, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF644EGG, ENCFF644GYU, ENCFF647KBV, ENCFF655CUI, ENCFF656DRS, ENCFF661TOM, ENCFF663SPA, ENCFF668SQN, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF694EPZ, ENCFF695XIY, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF699SBZ, ENCFF707HQI, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF754VQW, ENCFF757JMT, ENCFF758BKM, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF775OZV, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF782CNW, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF801SNQ, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF818ZJQ, ENCFF819JGD, ENCFF821HAZ, ENCFF830CBI, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF847IGW, ENCFF848UMJ, ENCFF851JLX, ENCFF855UFX, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF883APB, ENCFF886UAF, ENCFF894COY, ENCFF898CAY, ENCFF900AIQ, ENCFF903ULI, ENCFF906CJJ, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF927LFD, ENCFF934VFW, ENCFF937KFC, ENCFF938XTE, ENCFF946LMX, ENCFF949QCF, ENCFF950FFF, ENCFF951PCM, ENCFF952EQQ, ENCFF952FJN, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974KKD, ENCFF983GRF, ENCFF986DZE, ENCFF994PPZ, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF008XVO, ENCFF075EMK, ENCFF160TQC, ENCFF178HDG, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF254YNR, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF499CDP, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF667KKO, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF827NYZ, ENCFF847LGC, ENCFF906OAF, ENCFF932SOZ, ENCFF970VKL, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198227, SRR15198228, SRR2040601, SRR2927113 chr11 69587061 69587101 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000018752.20, Tnfsfm13 ENCFF083BIG, ENCFF102BWR, ENCFF107XGE, ENCFF133PEB, ENCFF178ZVU, ENCFF192NVI, ENCFF221JIC, ENCFF307VAF, ENCFF330LWU, ENCFF334RGJ, ENCFF347UAC, ENCFF385MVU, ENCFF491XRO, ENCFF533CLY, ENCFF544BEF, ENCFF641QXI, ENCFF704GEB, ENCFF705JRV, ENCFF723KAG, ENCFF723QIC, ENCFF755FCM, ENCFF764EJV, ENCFF780TUN, ENCFF865WQE, ENCFF902GVX, ENCFF906FNQ, ENCFF907HVO, ENCFF924VRI, ENCFF573UIH, ENCFF728TXU, ENCFF775SSI, ENCFF054EOL, ENCFF057MDU, ENCFF066MTU, ENCFF108JLQ, ENCFF117ZMM, ENCFF144EDQ, ENCFF207HZS, ENCFF228CMT, ENCFF240OIM, ENCFF285NFL, ENCFF297PPT, ENCFF306FQJ, ENCFF399TOF, ENCFF426FAF, ENCFF437QAE, ENCFF456GLS, ENCFF484PQK, ENCFF505PJK, ENCFF507WIK, ENCFF596PMK, ENCFF643SBQ, ENCFF644EGG, ENCFF663SPA, ENCFF695XIY, ENCFF705CES, ENCFF750IZJ, ENCFF789AOM, ENCFF794GVC, ENCFF796TQV, ENCFF834TET, ENCFF932XKS, ENCFF958FDX, ENCFF160TQC, ENCFF306ADU, SRR15198219, SRR2927111 chr11 70430394 70430395 + Predicted LINE|L1|L1M5 ENSMUSG00000020828.14, Pld2 ENCFF521UGJ, ENCFF643VPC, ENCFF683RFI, ENCFF710DAI, ENCFF249LSC, ENCFF421DHQ, ENCFF440IAL, ENCFF647KBV, ENCFF821HAZ chr11 70793073 70793074 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000020817.17, Rabep1 ENCFF001NDA, ENCFF001NDD, ENCFF696TCH chr11 72989097 72989098 - Predicted LTR|ERVL-MaLR|ORR1A3-int ENSMUSG00000005949.10, Ctns SRR2089638, SRR2089647, SRR2089651 chr11 73419999 73420006 - Predicted LTR|ERVK|RLTR13D6 ENSMUSG00000095095.3, ENSMUSG00000095312.2, Or1e26, Or1e23 SRR2089613, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089639, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr11 73718718 73718719 - Predicted LINE|L1|L1MdA_III ENSMUSG00000061984.7, ENSMUSG00000094488.3, Or1e32, Or1e33 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr11 73718890 73718891 - Predicted LINE|L1|L1MdA_III ENSMUSG00000061984.7, ENSMUSG00000094488.3, Or1e32, Or1e33 SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089610, SRR2089611, SRR2089612, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089642, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr11 74247080 74247081 + Predicted LINE|L1|L1_Mur2 ENSMUSG00000058275.4, Or1d2 SRR2089635, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr11 74609045 74609046 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000020745.16, Pafah1b1 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF023MKT, ENCFF561CZI chr11 75420922 75421163 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000038178.17, Slc43a2 ENCFF001NEC, ENCFF023RRS, ENCFF027IIP, ENCFF043JGD, ENCFF051PTY, ENCFF084PUC, ENCFF090USB, ENCFF102BWR, ENCFF104LLO, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126RJS, ENCFF140VGY, ENCFF163LPQ, ENCFF178ZVU, ENCFF184EAT, ENCFF186RYS, ENCFF207OVG, ENCFF218HNK, ENCFF225MMR, ENCFF261OTH, ENCFF264DCN, ENCFF274WSX, ENCFF291LRG, ENCFF297CWJ, ENCFF305IXM, ENCFF310HPH, ENCFF322VJD, ENCFF344ILW, ENCFF345OIF, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF445BBH, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF527VIY, ENCFF528CBF, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF564YPB, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF623BKO, ENCFF625JLB, ENCFF654BXL, ENCFF670YKO, ENCFF683RFI, ENCFF707QJV, ENCFF711WAC, ENCFF727WWV, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF841OXD, ENCFF865WQE, ENCFF868XLZ, ENCFF880FYC, ENCFF912RLS, ENCFF913CFN, ENCFF917RNE, ENCFF922KQY, ENCFF931PFF, ENCFF933UPG, ENCFF937GBW, ENCFF996STG, ENCFF005GQR, ENCFF017LOD, ENCFF023MKT, ENCFF065LOT, ENCFF148XRK, ENCFF195JLT, ENCFF199IRM, ENCFF222GPK, ENCFF234LUQ, ENCFF271OHB, ENCFF308FEA, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF377LAC, ENCFF377UGQ, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF468AKL, ENCFF478KOR, ENCFF500QZK, ENCFF532UKS, ENCFF572TOH, ENCFF595WXV, ENCFF636NES, ENCFF654AEJ, ENCFF721BNO, ENCFF725ATS, ENCFF747XPP, ENCFF775SSI, ENCFF818BAS, ENCFF829RHM, ENCFF860XMD, ENCFF914YDJ, ENCFF962OCF, ENCFF967NOO, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF027GBM, ENCFF033DWC, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF045YRV, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF053NFR, ENCFF057FFG, ENCFF061WTN, ENCFF065ZIE, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF087IUJ, ENCFF094RHV, ENCFF103SQR, ENCFF116QKZ, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF127DCC, ENCFF127KHN, ENCFF128CYW, ENCFF133KGZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF170KWW, ENCFF172DMS, ENCFF175LCC, ENCFF199AAD, ENCFF205CDI, ENCFF207HZS, ENCFF210BVU, ENCFF235HER, ENCFF239RQP, ENCFF243LBQ, ENCFF249LSC, ENCFF257EYD, ENCFF258WLS, ENCFF268ZHE, ENCFF275HRX, ENCFF278JAU, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF306OWL, ENCFF308WGP, ENCFF313IFI, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF343MIX, ENCFF346HDC, ENCFF377OQI, ENCFF380LXU, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF406LFV, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF429TQT, ENCFF430ERW, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF487OHM, ENCFF492HRC, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF507WIK, ENCFF517EJZ, ENCFF524PAV, ENCFF529LEZ, ENCFF530DUT, ENCFF536ZVF, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF572SQL, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF615ULR, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF644EGG, ENCFF644GYU, ENCFF655CUI, ENCFF656DRS, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF696XZL, ENCFF707HQI, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF758JNE, ENCFF765UBL, ENCFF775OZV, ENCFF780UQU, ENCFF786BUI, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF817NCH, ENCFF819JGD, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF869MFM, ENCFF871CMC, ENCFF877SON, ENCFF877VSZ, ENCFF883APB, ENCFF886UAF, ENCFF898CAY, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF934VFW, ENCFF949QCF, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955WXI, ENCFF956ZKG, ENCFF959CWA, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF998BIQ, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF075EMK, ENCFF119IHT, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF477YHR, ENCFF499CDP, ENCFF510AYI, ENCFF525QIM, ENCFF670VVN, ENCFF803OIY, ENCFF904RJF, ENCFF911OIZ, ENCFF932SOZ, DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178990, SRR9178991 chr11 75519774 75519775 + Predicted SINE|Alu|B1_Mm ENSMUSG00000006127.10, Inpp5k ENCFF262WAE, ENCFF265LKR, ENCFF823PZU, ENCFF881TID, ENCFF970JWC, ENCFF359GCY, ENCFF022ACG, ENCFF089SWU, ENCFF106RLX, ENCFF149DFF, ENCFF240OIM, ENCFF374VAZ, ENCFF403CRC, ENCFF581ZWM, ENCFF585CYT, ENCFF781XUM, ENCFF936LNA, ENCFF951PCM, ENCFF178HDG, ENCFF248ELC, ENCFF477YHR, ENCFF904RJF chr11 76389848 76389866 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000017631.20, Abr ENCFF117BGT, ENCFF313ERY, ENCFF379JPQ, ENCFF519IZA, ENCFF522VLI, ENCFF581WWO, ENCFF667FDW, ENCFF670YKO, ENCFF787LWL, ENCFF883UYA, ENCFF896MQK, ENCFF913CFN, ENCFF951UXE, ENCFF657FNE, ENCFF923VUD, ENCFF066MTU, ENCFF163GEC, ENCFF167GWU, ENCFF210BVU, ENCFF255XDN, ENCFF260UQJ, ENCFF433QNW, ENCFF498OHV, ENCFF505YPK, ENCFF765AQX, ENCFF794MMU, ENCFF399XUL chr11 76496216 76496217 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000024205.8, Rpl36-ps2 SRR2089639, SRR2089640, SRR2089648, SRR2089650, SRR2089651 chr11 76504220 76504221 - Annotated LINE|L2|L2a ENSMUSG00000017631.20, Abr ENSMUST00000176024.2 chr11 77528795 77528796 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000082646.2, Gm12732 ENCFF089PFT, ENCFF452AXW, ENCFF521IDK, ENCFF696TCH chr11 77570130 77570131 + Predicted SINE|B2|B2_Mm1t ENSMUSG00000037857.17, Nufip2 ENCFF089PFT, ENCFF712DGP, ENCFF248ELC chr11 77775369 77775370 - Annotated SINE|B2|B3A ENSMUSG00000017453.5, Pipox ENSMUST00000155401.2 chr11 77784921 77784922 - Annotated DNA|TcMar|Eulor8 ENSMUSG00000017453.5, Pipox ENSMUST00000017597.5 chr11 78104288 78104289 - Predicted SINE|MIR|MIR3 ENSMUSG00000002052.7, Supt6 ENCFF221NAP, ENCFF836JVX, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF027RRZ, ENCFF060JCS, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF148XRK, ENCFF170XMM, ENCFF195JLT, ENCFF199IRM, ENCFF222GPK, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF296VFB, ENCFF308FEA, ENCFF326UXM, ENCFF335ZSA, ENCFF355AMN, ENCFF374YTS, ENCFF394BDJ, ENCFF408NBX, ENCFF444YCN, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF533DWD, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF667SYQ, ENCFF686KMX, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF754TOT, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF803VZZ, ENCFF809FPA, ENCFF818BAS, ENCFF831ISX, ENCFF840XYZ, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF886BRO, ENCFF914YDJ, ENCFF939IUH, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF260UQJ, ENCFF383AJS, ENCFF062GNP, ENCFF075EMK, ENCFF199IWW, ENCFF248ELC, ENCFF254YNR, ENCFF269AST, ENCFF302TQH, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF525QIM, ENCFF641WPY, ENCFF667KKO, ENCFF670VVN, ENCFF716YKR, ENCFF749STK, ENCFF783KGQ, ENCFF854IBU, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, SRR3178206, SRR5643191 chr11 78138130 78138131 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000002052.7, Supt6 ENCFF083CUR, ENCFF086ZMV, ENCFF092YWY, ENCFF105KSL, ENCFF198NQV, ENCFF212JFB, ENCFF264RIV, ENCFF366BBB, ENCFF565YHF, ENCFF643VPC, ENCFF698LQF, ENCFF858CTQ, ENCFF913CFN, ENCFF003GJV, ENCFF012HVN, ENCFF064VAD, ENCFF066UDR, ENCFF108JLQ, ENCFF209RRO, ENCFF247VEN, ENCFF255XDN, ENCFF257EYD, ENCFF268YSJ, ENCFF440IAL, ENCFF453MPR, ENCFF484PQK, ENCFF527XBQ, ENCFF603QSQ, ENCFF635XED, ENCFF681EEO, ENCFF696QTS, ENCFF814TTQ, ENCFF840EFC, ENCFF944RHJ, DRR091697, SRR9178977 chr11 78218707 78218708 + Predicted SINE|B2|B2_Mm1t ENSMUSG00000041958.11, Pigs ENCFF062GNP, ENCFF499GDC, ENCFF510IAG, ENCFF582WGH, ENCFF653QJY, SRR11428470 chr11 78429337 78429338 + Predicted LINE|L2|L2c ENSMUSG00000001105.16, Ift20 ENCFF002DNB, ENCFF002FAA, ENCFF002FAC, ENCFF102BWR, ENCFF198RBJ, ENCFF221NAP, ENCFF437AJW, ENCFF450WAV, ENCFF575RUC, ENCFF793IYH, ENCFF885AJK, ENCFF993QUE, ENCFF945ICZ, ENCFF163BDT, ENCFF573WSG, ENCFF766UJI, SRR5643191, SRR5643199, SRR5643200, SRR5643201, SRR6904683, SRR6904684, SRR9178976, SRR9178988 chr11 79955846 79955847 - Predicted LINE|L1|L1MA9 ENSMUSG00000017561.17, Crlf3 ENCFF107XGE, ENCFF284OMO, ENCFF295SYY, ENCFF439OFV, ENCFF605IFN, ENCFF068CQU, ENCFF082OML, ENCFF087OKI, ENCFF098AYQ, ENCFF851JLX, ENCFF894SHM, ENCFF955WXI chr11 81876228 81876233 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000084996.2, Gm11419 ENSMUST00000150772.2 DRR091692, SRR10697197, SRR15198219, SRR15198221, SRR15198222, SRR15198227, SRR15198228, SRR2927113, SRR9080662 chr11 81910792 81910793 - Annotated LTR|ERVL|MLT2B1 ENSMUSG00000109297.2, Gm31522 ENSMUST00000207942.2 ENCFF001RTD, ENCFF001RTN chr11 82845487 82845488 + Annotated LTR|ERV1|MER89 ENSMUSG00000054404.14, Slfn5 ENSMUST00000108157.2 ENCFF993QUE, ENCFF222GPK, ENCFF894SHM chr11 82932326 82932327 - Predicted LINE|L1|L1_Mur3 ENSMUSG00000121398.1, Slfn10-ps ENCFF273CJD, ENCFF273TLO, ENCFF400XLQ, ENCFF054EOL, ENCFF256UWN, ENCFF647KBV, ENCFF694EPZ, ENCFF834TET, ENCFF910CTW, ENCFF928YDQ chr11 82932396 82932397 - Predicted LINE|L1|L1_Mur3 ENSMUSG00000035208.17, ENSMUSG00000121398.1, Slfn8, Slfn10-ps ENCFF273TLO, ENCFF400XLQ, ENCFF054EOL, ENCFF256UWN, ENCFF422CQE, ENCFF483SQS, ENCFF647KBV, ENCFF694EPZ, ENCFF834TET, ENCFF910CTW, ENCFF928YDQ chr11 82932538 82932539 - Predicted LINE|L1|L1_Mur3 ENSMUSG00000121398.1, Slfn10-ps ENCFF605IFN, ENCFF734FHF, ENCFF960LQP, ENCFF167GWU, ENCFF220GKL, ENCFF306FQJ, ENCFF332RWQ, ENCFF341YZB, ENCFF422CQE, ENCFF426ZCK, ENCFF483SQS, ENCFF661TOM, ENCFF705CES, ENCFF906CJJ chr11 83082111 83082179 + Annotated LTR|ERVK|RLTR12BD_Mm ENSMUSG00000018986.11, Slfn3 ENSMUST00000019130.8, ENSMUST00000214041.2, NM_011409.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF002DNB, ENCFF002ERU, ENCFF002ERW, ENCFF002FAA, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF083BIG, ENCFF084PUC, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF104LLO, ENCFF106GQS, ENCFF106RGV, ENCFF108UNS, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF277XPM, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF289WHW, ENCFF295SYY, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF332ZPO, ENCFF344ILW, ENCFF345OIF, ENCFF347HAB, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF363XWU, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF401HCS, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF453XOG, ENCFF460NGS, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521UGJ, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF570GTP, ENCFF575RUC, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF643VPC, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF698LQF, ENCFF704GEB, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF771YNG, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF793CWJ, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF868XLZ, ENCFF878SQO, ENCFF880FYC, ENCFF881UBL, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF951UXE, ENCFF962LFN, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF002SZY, ENCFF002ZAX, ENCFF004AEL, ENCFF006JHA, ENCFF009AON, ENCFF009AVK, ENCFF013SNI, ENCFF014CMK, ENCFF015JJB, ENCFF019PWU, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF037IZV, ENCFF039DES, ENCFF041PJP, ENCFF045YRV, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF053NFR, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF061WTN, ENCFF065UBR, ENCFF065ZIE, ENCFF066MTU, ENCFF066UDR, ENCFF067OYG, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087XKQ, ENCFF088PZI, ENCFF088SVK, ENCFF094RHV, ENCFF095NMU, ENCFF106GHS, ENCFF107YGR, ENCFF116QKZ, ENCFF118PQI, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF139JTM, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF151XBP, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF170KWW, ENCFF172DMS, ENCFF175LCC, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF197JAP, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF207RVA, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237JCE, ENCFF239RQP, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF249LSC, ENCFF254TFB, ENCFF257EYD, ENCFF258WLS, ENCFF260UQJ, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF275TCB, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF302MXO, ENCFF306OWL, ENCFF310WDZ, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF350KYC, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF359DNK, ENCFF363PDR, ENCFF369VAI, ENCFF377OQI, ENCFF380BYT, ENCFF380LXU, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF394AUR, ENCFF397MUI, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF411KCB, ENCFF411YXB, ENCFF417OEG, ENCFF420REU, ENCFF422ZNC, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF454DOT, ENCFF458EUS, ENCFF459TYQ, ENCFF464KYQ, ENCFF468RDR, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF478BEL, ENCFF478MHH, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF486BJT, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF529YFS, ENCFF530DUT, ENCFF531JWM, ENCFF536ZVF, ENCFF537DSI, ENCFF538ZTW, ENCFF541HSQ, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549IDH, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF557JPW, ENCFF559QXN, ENCFF561CZI, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF584ZUK, ENCFF591WVP, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF597BNT, ENCFF598LJF, ENCFF598WAL, ENCFF601JTS, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF612KDP, ENCFF614WCH, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF633QXI, ENCFF636SOT, ENCFF637PIP, ENCFF644EGG, ENCFF644GYU, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF656DRS, ENCFF658NHH, ENCFF672WYO, ENCFF673GRZ, ENCFF678CRA, ENCFF680WIN, ENCFF685GDB, ENCFF687GPO, ENCFF689RQK, ENCFF689UNV, ENCFF693POR, ENCFF695XIY, ENCFF696TTO, ENCFF696VQM, ENCFF700IPC, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF755REI, ENCFF758IOS, ENCFF759WDO, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF789AOM, ENCFF794MMU, ENCFF796TQV, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF817NCH, ENCFF820JMO, ENCFF825JNK, ENCFF829HAB, ENCFF832FTK, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF851JLX, ENCFF855UFX, ENCFF858OFI, ENCFF860SGX, ENCFF863ENS, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF885ZAO, ENCFF886UAF, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF901KUE, ENCFF903KDM, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF932XKS, ENCFF934VFW, ENCFF935ZEM, ENCFF936DQW, ENCFF936LNA, ENCFF938CNS, ENCFF938XTE, ENCFF939QLN, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974XWJ, ENCFF983GRF, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF998BIQ, ENCFF999ZYF chr11 83084870 83084871 + Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000018986.11, ENSMUSG00000121399.1, Slfn3, ENSMUSG00000121399 ENCFF002DND, ENCFF102BWR, ENCFF221NAP, ENCFF437AJW, ENCFF575RUC, ENCFF595GFM, ENCFF775SSI, ENCFF197OUM, ENCFF691DJE chr11 83114374 83114428 + Annotated LTR|ERVK|RLTR12BD_Mm ENSMUSG00000087107.9, AI662270 ENSMUST00000145461.8, ENSMUST00000216842.2, ENSMUST00000143673.2, NR_015519.1 ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTJ, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF022FSI, ENCFF027BYX, ENCFF043JGD, ENCFF048IBL, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF084PUC, ENCFF091WMS, ENCFF102BWR, ENCFF104LLO, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF206EGD, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF225MMR, ENCFF251TMY, ENCFF262URV, ENCFF279BVM, ENCFF297CWJ, ENCFF310HPH, ENCFF326TQL, ENCFF327MSM, ENCFF331WKS, ENCFF351JWR, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489IGD, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF527VIY, ENCFF533CLY, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF552NWL, ENCFF564YPB, ENCFF575RUC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF625JLB, ENCFF686EWL, ENCFF711WAC, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF784LWT, ENCFF793IYH, ENCFF793STU, ENCFF802GAN, ENCFF808XFI, ENCFF813ZJI, ENCFF828WIK, ENCFF836JVX, ENCFF849GVQ, ENCFF852ZDB, ENCFF865WQE, ENCFF874ELO, ENCFF880FYC, ENCFF884TJE, ENCFF885AJK, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF931PFF, ENCFF935XRF, ENCFF937GBW, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF017LOD, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF455DHP, ENCFF609ZVL, ENCFF712DGP, ENCFF933KQV, ENCFF935LAF, ENCFF002SZY, ENCFF033DWC, ENCFF046HWP, ENCFF049SEE, ENCFF052RNG, ENCFF065ZIE, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF131VEF, ENCFF133KGZ, ENCFF156XMZ, ENCFF157IFW, ENCFF158HQO, ENCFF170KWW, ENCFF177LXI, ENCFF178ZXW, ENCFF189BIW, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF210BVU, ENCFF222MKT, ENCFF235HER, ENCFF258WLS, ENCFF264PYB, ENCFF275HRX, ENCFF275TCB, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF299ENO, ENCFF313IFI, ENCFF316EEH, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF359DNK, ENCFF387BVS, ENCFF390AUP, ENCFF406NLL, ENCFF408FFP, ENCFF417OEG, ENCFF424GQM, ENCFF430ERW, ENCFF454DOT, ENCFF459TYQ, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF490ULA, ENCFF492HRC, ENCFF497KLL, ENCFF505PJK, ENCFF505WKA, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF565YJQ, ENCFF576EOD, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF644GYU, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF689ZLL, ENCFF693POR, ENCFF705CES, ENCFF707HQI, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF727JTZ, ENCFF737VKP, ENCFF747VYT, ENCFF765AQX, ENCFF780UQU, ENCFF801SNQ, ENCFF809QBQ, ENCFF834TQY, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF877SON, ENCFF898CAY, ENCFF926FRX, ENCFF938XTE, ENCFF949QCF, ENCFF955YCX, ENCFF956ZKG, ENCFF994PPZ, ENCFF999ZYF, ENCFF248ELC, ENCFF671TUD chr11 83134643 83134646 + Predicted LINE|L1|L1M4c ENSMUSG00000121399.1, ENSMUSG00000121399 ENCFF002DNB, ENCFF002DND, ENCFF002ERW, ENCFF221NAP, ENCFF327MSM, ENCFF502ANK, ENCFF934ZAP, ENCFF030IFE, ENCFF187BHR, ENCFF279EVY, ENCFF306OWL, ENCFF319YFJ, ENCFF386HCR, ENCFF439HXQ, ENCFF516QKR, ENCFF673GRZ, ENCFF830CBI, ENCFF896XAZ, ENCFF935ZEM chr11 83549317 83549318 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000000982.6, Ccl3 ENCFF198NQV, ENCFF279BVM, ENCFF794FBC, ENCFF014CMK, ENCFF285NFL, ENCFF439HXQ, ENCFF477MBL, ENCFF687GPO, ENCFF885ZAO chr11 83959626 83959627 - Annotated SINE|Alu|PB1D9 ENSMUSG00000018648.16, Dusp14 ENSMUST00000018792.12 ENCFF148XRK, ENCFF222GPK, ENCFF394BDJ, ENCFF448TTG chr11 84117838 84117839 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000020532.19, Acaca ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr11 84402404 84402405 - Predicted LTR|ERVL|MT2B2 ENSMUSG00000018697.15, Aatf ENCFF002DMZ, ENCFF002EZY, ENCFF048FGD, ENCFF051JGE, ENCFF143PHU, ENCFF885AJK, ENCFF888LGA, ENCFF302KQL, ENCFF411YXB, ENCFF894SHM, SRR6904683, SRR6904685 chr11 84711157 84711173 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000018405.8, Mrm1 ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF022FSI, ENCFF059IQN, ENCFF214IUN, ENCFF326TQL, ENCFF696TCH, ENCFF808XFI, ENCFF134HVE, ENCFF222GPK, ENCFF271OHB, ENCFF465BBM, ENCFF468AKL, ENCFF587VDB, ENCFF595WXV, ENCFF744OEI, ENCFF766LGO, ENCFF854MWX, ENCFF912MUD, ENCFF914YDJ, ENCFF235HER, ENCFF267KZS, ENCFF313IFI, ENCFF008XVO, ENCFF062GNP, ENCFF119IHT, ENCFF344OJQ, ENCFF481CFU, ENCFF499GDC, ENCFF723MAR, ENCFF749STK, ENCFF911OIZ, SRR15198220, SRR15198221 chr11 85983973 85983974 - Predicted LINE|L1|L1MdF_V ENSMUSG00000034329.17, Brip1 SRR2089622, SRR2089647, SRR2089650, SRR2089651 chr11 86115340 86115341 - Predicted DNA|hAT-Charlie|MER5B ENSMUSG00000018068.14, Ints2 DRR091691, DRR091692, DRR091697, DRR091698, SRR10697203, SRR11428468, SRR15198227, SRR15198228, SRR2927113, SRR5643199, SRR9178978, SRR9178980, SRR9178984, SRR9178985, SRR9178991, SRR9178992 chr11 86655305 86655306 + Predicted LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000120202.1, ENSMUSG00000120202 SRR11428470, SRR15198221, SRR15198224 chr11 90623594 90623595 + Annotated LTR|ERVL-MaLR|ORR1B1 NR_166827.1 chr11 93782166 93782167 + Predicted SINE|MIR|MIRc ENSMUSG00000059474.14, Mbtd1 ENCFF051JSS, DRR091688, DRR091693, SRR13142121 chr11 94028482 94028525 + Annotated SINE|Alu|B1_Mur1 ENSMUSG00000086003.9, B230206L02Rik ENSMUST00000241009.1, ENSMUST00000245077.1 chr11 94905179 94905180 + Predicted LTR|ERVK|RMER17A ENSMUSG00000047181.13, Samd14 ENCFF181RDS, ENCFF888LGA, ENCFF101BDM, ENCFF251WZA chr11 9501092 9501093 + Predicted LINE|L1|L1MdFanc_I ENSMUSG00000004668.15, Abca13 SRR2089611, SRR2089612, SRR2089614, SRR2089618, SRR2089619, SRR2089622, SRR2089631, SRR2089634, SRR2089639, SRR2089650 chr11 9512449 9512450 + Predicted LINE|L1|L1MdFanc_I ENSMUSG00000004668.15, Abca13 SRR2089608, SRR2089609, SRR2089611, SRR2089612, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089650 chr11 95779929 95779930 - Predicted SINE|Alu|B1_Mur4 ENSMUSG00000013418.9, B4galnt2 SRR2089605, SRR2089635, SRR2089636, SRR2089647, SRR2089649, SRR2089651 chr11 95789484 95789485 - Predicted LINE|L1|MusHAL1 ENSMUSG00000013418.9, B4galnt2 SRR2089635, SRR2089636, SRR2089638, SRR2089643, SRR2089648, SRR2089649 chr11 96771274 96771275 - Annotated LTR|ERVK|RMER19C ENSMUSG00000120942.1, ENSMUSG00000120942 ENSMUST00000246593.1 chr11 96940039 96940042 - Predicted SINE|B2|B3 ENSMUSG00000020878.7, Lrrc46 SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198219, SRR15198220, SRR15198221, SRR15198224, SRR15198226, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666 chr11 97268322 97268323 + Predicted DNA|hAT|UCON73 ENSMUSG00000038485.7, Socs7 ENCFF002FAA, ENCFF991TPB, ENCFF818BAS, ENCFF338LFG, SRR15198218, SRR15198220, SRR15198222, SRR15198226, SRR15198227, SRR5643190, SRR5643192 chr11 97489306 97489342 + Annotated LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000085860.3, 2410003L11Rik ENSMUST00000131687.3, ENSMUST00000241870.1, ENSMUST00000245786.1, ENSMUST00000246101.1, ENSMUST00000145262.3, ENSMUST00000244970.1, NR_045496.1 ENCFF001NDA, ENCFF001NDD, ENCFF089PFT, ENCFF489IGD, ENCFF521IDK, ENCFF696TCH, ENCFF874ELO chr11 97509264 97509265 + Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000085860.3, 2410003L11Rik ENCFF089PFT, ENCFF696TCH, ENCFF302KQL chr11 97674044 97674045 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000071415.7, Rpl23 ENCFF792XYG, ENCFF960LQP, ENCFF985BLV, ENCFF994BOT, ENCFF008YSM, ENCFF034WGV, ENCFF060FGD, ENCFF098TCZ, ENCFF107YGR, ENCFF248XZC, ENCFF273CBP, ENCFF310WDZ, ENCFF512LAN, ENCFF538ZTW, ENCFF588JAU, ENCFF655KBW, ENCFF740WXS, ENCFF812LAI, ENCFF997QQG chr11 97675924 97675926 - Predicted LTR|ERV1|RLTR6_Mm ENSMUSG00000071415.7, Rpl23 ENCFF608NVM, ENCFF643VPC, ENCFF111MWQ, ENCFF137OYQ, ENCFF162FTA, ENCFF167GWU, ENCFF169JOQ, ENCFF271RFU, ENCFF272WGJ, ENCFF324ITL, ENCFF374VAZ, ENCFF382VCK, ENCFF438ROC, ENCFF439BEV, ENCFF462HZM, ENCFF504PGI, ENCFF515GXB, ENCFF581ZWM, ENCFF601JTS, ENCFF647KBV, ENCFF699SBZ, ENCFF724VJN, ENCFF758BKM, ENCFF814PHK, ENCFF853PNO, ENCFF859MTL, ENCFF916BSM, ENCFF931NMQ, ENCFF984QED chr11 97676136 97676137 - Predicted LTR|ERV1|RLTR6_Mm ENSMUSG00000071415.7, Rpl23 ENCFF273TLO, ENCFF400XLQ, ENCFF439OFV, ENCFF812CUD, ENCFF970JWC, ENCFF057MDU, ENCFF116DGU, ENCFF149DFF, ENCFF208BJY, ENCFF286RSE, ENCFF338DAA, ENCFF377OQI, ENCFF711OYQ, ENCFF781MKK, ENCFF791AUB, ENCFF851JLX, ENCFF866IHG chr11 97676243 97676271 - Predicted LTR|ERV1|RLTR6_Mm ENSMUSG00000071415.7, Rpl23 ENCFF027IIP, ENCFF321BMO, ENCFF489VZI, ENCFF707QJV, ENCFF710DAI, ENCFF771LLL, ENCFF789LUC, ENCFF812CUD, ENCFF896MQK, ENCFF956WVJ, ENCFF970JWC, ENCFF065UBR, ENCFF095NMU, ENCFF106GHS, ENCFF118YHP, ENCFF121IDD, ENCFF149DFF, ENCFF184ALY, ENCFF208BJY, ENCFF237JCE, ENCFF273CBP, ENCFF286RSE, ENCFF303BIV, ENCFF306FQJ, ENCFF310HAL, ENCFF328TJH, ENCFF331YYO, ENCFF332RWQ, ENCFF363PDR, ENCFF371ZDG, ENCFF403RPK, ENCFF414IHO, ENCFF421DHQ, ENCFF426ZCK, ENCFF429ZEH, ENCFF450CUC, ENCFF483SQS, ENCFF536ZFC, ENCFF578YPJ, ENCFF585CYT, ENCFF591WVP, ENCFF641CYW, ENCFF657NUT, ENCFF694EPZ, ENCFF698XCB, ENCFF755REI, ENCFF757JMT, ENCFF781XUM, ENCFF816CPX, ENCFF818ZJQ, ENCFF821HAZ, ENCFF834TET, ENCFF851JLX, ENCFF854LJN, ENCFF866IHG, ENCFF881YOK, ENCFF916JWW, ENCFF927LFD, ENCFF970PLY, ENCFF976SMI, ENCFF996AOW chr11 98541485 98541486 + Annotated SINE|Alu|B1_Mur1 ENSMUSG00000017211.15, Gsdma2 ENSMUST00000136111.2 chr11 98689430 98689481 + Annotated SINE|ID|ID4_v ENSMUSG00000052915.15, Msl1 ENSMUST00000037930.13, NM_001361933.1, NM_001361934.1 ENCFF601JTS, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178205, SRR5643190, SRR5643192, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr11 99887274 99887282 - Predicted DNA|hAT-Charlie|URR1A ENSMUSG00000078252.2, Krtap17-1 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091698, DRR091699, SRR11428468, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2927113, SRR9178981, SRR9178990, SRR9178992 chr12 100803687 100803688 - Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000120898.1, ENSMUSG00000120898 ENSMUST00000246360.1 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, ENCFF993QUE chr12 100959231 100959232 + Annotated LTR|ERVL-MaLR|MLT1A1 ENSMUSG00000113634.2, Gm36756 ENSMUST00000222768.2 DRR091688, DRR091689, SRR13142118, SRR13142120, SRR2040601, SRR3178205, SRR3178206, SRR9080662, SRR9080666, SRR9178985 chr12 101362878 101362879 + Predicted LINE|L1|L1MdA_VII ENSMUSG00000047014.8, Catsperb DRR091690, DRR091693, DRR091694, DRR091697, DRR091698, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR15198221, SRR15198224, SRR9178980, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178992 chr12 101729195 101729201 - Predicted SINE|MIR|MIRb ENSMUSG00000021186.10, Fbln5 SRR2089607, SRR2089615, SRR2089617, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr12 101880237 101880238 - Predicted SINE|Alu|PB1D10 ENSMUSG00000021188.15, Trip11 ENCFF064PBF, ENCFF896IIZ, ENCFF394BDJ, ENCFF454ZUS, ENCFF935LAF, ENCFF158HQO, ENCFF716NXU, ENCFF008XVO, ENCFF075EMK, ENCFF269AST, ENCFF349AIG, SRR10697197, SRR10697198, SRR10697202, SRR11428467, SRR13142120, SRR9178979, SRR9178981, SRR9178987 chr12 101938157 101938172 + Predicted DNA|hAT-Charlie|MER5B ENSMUSG00000041781.10, Cpsf2 DRR091688, DRR091689, DRR091690, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6904685, SRR9080662, SRR9080663, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 102112232 102112233 - Predicted LINE|L1|L1MB3 ENSMUSG00000090050.2, Gm16339 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089649 chr12 102249006 102249023 + Predicted LINE|CR1|L3 ENSMUSG00000044456.17, Rin3 ENCFF001NDA, ENCFF074HTO, ENCFF104LLO, ENCFF178ZVU, ENCFF295SYY, ENCFF296ASE, ENCFF415KCJ, ENCFF480BVV, ENCFF521UGJ, ENCFF552NWL, ENCFF595GFM, ENCFF743QXJ, ENCFF931DDH, ENCFF991TPB, ENCFF013HYW, ENCFF269WEZ, ENCFF345BBC, ENCFF455DHP, ENCFF609ZVL, ENCFF053NFR, ENCFF054EOL, ENCFF134PXJ, ENCFF149BQJ, ENCFF163BDT, ENCFF167EHX, ENCFF194DAO, ENCFF197TJB, ENCFF209RRO, ENCFF237HDL, ENCFF237JCE, ENCFF243LBQ, ENCFF249LSC, ENCFF286RSE, ENCFF296ITI, ENCFF301VMF, ENCFF363PDR, ENCFF380BYT, ENCFF417INY, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF429ZEH, ENCFF440IAL, ENCFF578YPJ, ENCFF587HBC, ENCFF597BNT, ENCFF644EGG, ENCFF647KBV, ENCFF668SQN, ENCFF700IPC, ENCFF712EKU, ENCFF758IOS, ENCFF791AUB, ENCFF867FTP, ENCFF869DVY, ENCFF361MLD, ENCFF904RJF, SRR15198219 chr12 102693580 102693592 - Annotated LTR|ERVL-MaLR|MTE2a ENSMUSG00000096751.4, ENSMUSG00000100006.2, Gm28373, Gm21971 ENSMUST00000178129.2, ENSMUST00000180187.2 SRR3178203, SRR3178205 chr12 104078983 104079035 + Annotated LTR|ERVK|ERVB4_1B-LTR_MM ENSMUSG00000041536.14, Serpina3a ENSMUST00000109965.8, NM_028740.2, NM_001167705.1 DRR091688, DRR091690, DRR091691, DRR091694, DRR091698, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198226, SRR15198227, SRR2040601, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178979 chr12 10419966 10420000 + Annotated DNA|DNA|UCON78 ENSMUSG00000020622.18, Nt5c1b ENSMUST00000143739.9, ENSMUST00000002456.10, ENSMUST00000147323.8, ENSMUST00000219826.2, ENSMUST00000217944.2, ENSMUST00000219292.2, ENSMUST00000218339.3, ENSMUST00000218327.2, ENSMUST00000218287.2, ENSMUST00000218551.2, ENSMUST00000218026.2, ENSMUST00000220257.2, ENSMUST00000219049.2, ENSMUST00000220611.2, ENSMUST00000118657.8, ENSMUST00000223534.2, ENSMUST00000218417.2, NM_001310582.1, NM_027588.3, NM_001373974.1, NM_001373975.1, NM_001373972.1, NM_001373973.1, NM_001373971.1, NR_164207.1, NR_164206.1, NR_164204.1, NR_164201.1, NR_164205.1, NR_164200.1, NR_164202.1, NR_164203.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 104486255 104486265 + Predicted LTR|ERVL-MaLR|MLT1L ENSMUSG00000112954.2, Gm49732 DRR091689, DRR091690, DRR091693, DRR091698, DRR091699, SRR10697203, SRR11428468, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198225, SRR15198226, SRR15198228, SRR2927111, SRR2927112, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 10496388 10496389 + Annotated SINE|B4|B4A ENSMUSG00000112792.2, Gm38407 ENSMUST00000219221.2, NR_110487.1 DRR091689, DRR091691, SRR10697196, SRR10697202, SRR15198223, SRR2040601, SRR2927111, SRR2927113, SRR9178979, SRR9178980, SRR9178984, SRR9178985, SRR9178987, SRR9178991 chr12 105479639 105479693 + Annotated LTR|ERV1|RMER2 ENSMUSG00000113535.3, AU015791 ENSMUST00000242950.1, ENSMUST00000223443.3, ENSMUST00000243641.1, ENSMUST00000245769.1, ENSMUST00000241250.1, NR_102381.1 chr12 105648415 105648416 + Predicted DNA|hAT-Charlie|Charlie7 ENSMUSG00000044715.8, Gskip SRR15198226, SRR2927111, SRR2927112 chr12 105753467 105753468 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000021111.16, Papola ENCFF743RQJ, ENCFF068CQU, ENCFF162FTA, ENCFF219PCN, ENCFF254VIN, ENCFF324ITL, ENCFF533ZIO, ENCFF667RGF, ENCFF856UMI, ENCFF881YOK, ENCFF976SMI chr12 105830521 105830522 + Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000113537.2, Gm48807 ENSMUST00000221840.2 SRR15198218, SRR15198222, SRR15198225, SRR2040601, SRR2927112 chr12 105866070 105866071 + Annotated LTR|ERVL-MaLR|MLT1J ENSMUSG00000113835.3, Gm19554 ENSMUST00000220934.3, NR_166753.1 ENCFF002FAE chr12 106065229 106065279 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000113390.2, Gm32635 ENSMUST00000221493.2, NR_168018.1 SRR11428469, SRR15198217, SRR15198221, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR9178982 chr12 106413924 106413979 - Annotated LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000092066.2, 1700121N20Rik ENSMUST00000167922.2, NR_036593.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 106804240 106804243 + Predicted DNA|hAT-Charlie|Cheshire ENSMUSG00000085801.2, 1700013N06Rik ENSMUST00000156376.2 DRR091699, SRR15198218, SRR15198222, SRR15198223, SRR15198227, SRR15198228 chr12 107095940 107095941 + Annotated LTR|ERVL-MaLR|MLT1A1 ENSMUSG00000086037.2, Gm16085 ENSMUST00000144575.2 chr12 107454841 107454842 - Annotated LTR|ERVK|RMER19B ENSMUSG00000113415.2, Gm3234 ENSMUST00000222644.2 chr12 108148437 108148438 + Predicted LINE|CR1|L3 ENSMUSG00000021258.11, Ccnk ENCFF002DMZ, ENCFF002DNB, ENCFF005NBP, ENCFF075MGH, ENCFF284OMO, ENCFF296ASE, ENCFF347HAB, ENCFF527VIY, ENCFF784LWT, ENCFF991TPB, ENCFF005GQR, ENCFF027RRZ, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF084CWD, ENCFF101BDM, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF170XMM, ENCFF173IVH, ENCFF199ZDO, ENCFF222GPK, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF261ZZF, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF330FNX, ENCFF364LFJ, ENCFF374YTS, ENCFF377UGQ, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF465BBM, ENCFF467LJD, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF510LAE, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF596QWT, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF667SYQ, ENCFF670FEL, ENCFF686KMX, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF725ATS, ENCFF737OUQ, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF808PVJ, ENCFF818BAS, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF868WEJ, ENCFF912MUD, ENCFF920FVY, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF978EQI, ENCFF120SMK, ENCFF378TYU, ENCFF399YLV, ENCFF541HSQ, ENCFF711XWR, ENCFF008XVO, ENCFF075EMK, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF254YNR, ENCFF269AST, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF477YHR, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF827NYZ, ENCFF847LGC, ENCFF888IIL, ENCFF904RJF, ENCFF932SOZ, ENCFF970VKL, SRR11428467, SRR11428469, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198224, SRR15198226, SRR2040601, SRR3178203 chr12 108475346 108475347 + Predicted LINE|CR1|L3 ENSMUSG00000058070.15, Eml1 ENCFF002FAA, ENCFF002FAC, ENCFF521NCL, ENCFF854KNE, ENCFF912MUD, SRR5643200 chr12 109628109 109628110 + Predicted LINE|L1|Lx7 ENSMUSG00000098202.3, B830012L14Rik ENCFF060JCS, ENCFF065LOT, ENCFF199IRM, ENCFF222GPK, ENCFF251WZA, ENCFF374YTS, ENCFF408NBX, ENCFF465BBM, ENCFF487DYP, ENCFF510TTU, ENCFF533DWD, ENCFF595WXV, ENCFF654AEJ, ENCFF657FNE, ENCFF725ATS, ENCFF775SSI, ENCFF831ISX, ENCFF962OCF, ENCFF967NOO, ENCFF008XVO, ENCFF399XUL, ENCFF499CDP, ENCFF510IAG, ENCFF670VVN, ENCFF749STK, ENCFF847LGC, ENCFF911OIZ chr12 110046813 110046814 - Predicted LTR|ERVL-MaLR|ORR1C1 ENSMUSG00000113868.2, Gm34719 DRR091693, DRR091699, SRR15198217, SRR15198228 chr12 110052817 110052843 - Predicted LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000113868.2, Gm34719 DRR091689, DRR091690, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198220, SRR15198221, SRR15198225, SRR15198227, SRR2927112, SRR2927113, SRR9080665, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989 chr12 110296600 110296601 + Predicted LINE|L1|Lx8 ENSMUSG00000114183.2, Gm47195 SRR2089606, SRR2089640, SRR2089647, SRR2089649, SRR2089651 chr12 111838996 111838997 - Predicted LINE|L1|L1MdA_VII ENSMUSG00000021285.16, Ppp1r13b ENCFF092YWY, ENCFF221JNS, ENCFF403ORF, ENCFF452AXW, ENCFF565YHF, ENCFF823PZU, ENCFF881TID, ENCFF045YRV, ENCFF143RTP, ENCFF242MZE, ENCFF260UQJ, ENCFF296ITI, ENCFF754VQW, ENCFF772QLP, ENCFF932XKS, ENCFF951PCM chr12 116104974 116104975 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000093765.8, Gm20658 ENCFF064PBF, ENCFF102BWR, ENCFF184EAT, ENCFF189WYV, ENCFF262URV, ENCFF326TQL, ENCFF331WKS, ENCFF390QUP, ENCFF527VIY, ENCFF533CLY, ENCFF670CXH, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF852ZDB, ENCFF922KQY, ENCFF991TPB, ENCFF993QUE, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF118YHP, ENCFF170KWW, ENCFF258WLS, ENCFF429TQT, ENCFF490ULA, ENCFF505WKA, ENCFF633QXI, ENCFF698WQO, ENCFF713JXV, ENCFF178HDG chr12 116720961 116720962 + Predicted LTR|ERVK|RMER6C ENSMUSG00000056553.15, Ptprn2 DRR091690, DRR091696, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191 chr12 15100389 15100426 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000113644.2, 4930448C13Rik ENSMUST00000221781.2, NR_045960.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR3178203, SRR3178204, SRR3178206, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 17657173 17657191 - Predicted LTR|ERVK|RLTR10C ENSMUSG00000114062.2, Gm48313 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178206, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178982, SRR9178986, SRR9178987, SRR9178988 chr12 22173542 22173543 - Predicted LTR|ERVK|RLTRETN_Mm ENSMUSG00000093846.2, Gm4425 ENCFF002EZU, SRR15198221, SRR15198223, SRR15198227, SRR15198228 chr12 22469751 22469752 - Predicted LTR|ERVK|IAP-d-int ENSMUSG00000113659.2, Gm49248 SRR2089609, SRR2089636, SRR2089638, SRR2089639, SRR2089647, SRR2089651 chr12 24548358 24548359 + Annotated SINE|Alu|B1_Mus2 ENSMUSG00000059669.9, Taf1b ENSMUST00000075954.9 ENCFF001NDA, ENCFF001RTF, ENCFF022FSI, ENCFF059IQN, ENCFF345OIF, ENCFF489IGD, ENCFF005GQR, ENCFF033ZUH, ENCFF065TCZ, ENCFF296VFB, ENCFF335ZSA, ENCFF854MWX, ENCFF014CMK, ENCFF576EOD, ENCFF584OOK, ENCFF598WAL, ENCFF119IHT, ENCFF499CDP, ENCFF499GDC, ENCFF582WGH, ENCFF671TUD, ENCFF847LGC, ENCFF911OIZ, SRR9080663 chr12 24904879 24904880 + Predicted LTR|ERVL-MaLR|MLT1G3 ENSMUSG00000020646.18, Mboat2 ENCFF002EZU, ENCFF002EZW, ENCFF005GQR, ENCFF247QZW, ENCFF296VFB, ENCFF335ZSA, ENCFF355AMN, ENCFF377UGQ, ENCFF860XMD, ENCFF932SOZ, SRR13142121, SRR13142122, SRR13142123 chr12 25227412 25227413 - Predicted LTR|ERVL-MaLR|MTEa ENSMUSG00000120697.1, ENSMUSG00000120697 SRR2089617, SRR2089621, SRR2089622, SRR2089623, SRR2089631, SRR2089634, SRR2089637, SRR2089640, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089650 chr12 25366189 25366191 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000113669.3, Gm36723 ENSMUST00000245450.1, ENSMUST00000222226.2, ENSMUST00000244453.1 ENCFF023MKT, ENCFF195JLT, ENCFF345BBC, ENCFF609ZVL chr12 26396716 26396751 + Annotated LINE|L1|L1MC3 ENSMUSG00000114048.2, 4930549C15Rik ENSMUST00000221235.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9080666, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178989 chr12 26884857 26884889 - Annotated LTR|ERVK|RMER17B2 ENSMUSG00000113218.2, 4933409F18Rik ENSMUST00000221910.2, ENSMUST00000222026.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 29186366 29186367 + Predicted LTR|LTR|LTR91A ENSMUSG00000113387.2, ENSMUSG00000113986.2, Gm31508, Gm31333 ENCFF101BDM, ENCFF143BIC, ENCFF251WZA, ENCFF775SSI, DRR091692, SRR15198217 chr12 31548490 31548491 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000020659.17, Cbll1 DRR091689, DRR091692, DRR091693, DRR091694, DRR091697, DRR091698, SRR10697201, SRR10697203, SRR11428469, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9178976, SRR9178978, SRR9178987 chr12 3200901 3200902 + Predicted LINE|L1|L1MdF_III ENSMUSG00000110250.2, Gm9077 SRR2089619, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089649 chr12 3201176 3201177 + Predicted LINE|L1|L1MdF_III ENSMUSG00000110250.2, Gm9077 SRR2089622, SRR2089635, SRR2089640, SRR2089647, SRR2089650, SRR2089651 chr12 32130837 32130860 - Annotated LTR|ERVK|RLTR16 ENSMUSG00000112569.3, Gm33111 ENSMUST00000219954.3, ENSMUST00000219617.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 32774727 32774728 + Annotated LTR|ERVL-MaLR|MTD NR_168680.1 chr12 34924807 34924827 - Annotated LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000052376.3, 4921508M14Rik ENSMUST00000061679.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989 chr12 34967093 34967138 - Annotated LTR|ERVL-MaLR|MTEa ENSMUSG00000004698.12, Hdac9 ENSMUST00000211752.2, NM_001271386.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 37524994 37525029 - Predicted Retroposon|L1-dep|RMER1C ENSMUSG00000113005.2, Gm34408 ENSMUST00000222104.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 39033998 39034035 - Annotated Retroposon|L1-dep|RMER1A ENSMUSG00000113092.2, Gm34662 ENSMUST00000220753.2, ENSMUST00000220502.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178206, SRR5643190, SRR5643192, SRR5643199, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 3910916 3911037 + Predicted SINE|B4|ID_B1 ENSMUSG00000020661.16, Dnmt3a ENSMUST00000172816.2 ENCFF007RPT, ENCFF051JSS, ENCFF074HTO, ENCFF090USB, ENCFF094CCP, ENCFF104LLO, ENCFF115KZV, ENCFF142CUS, ENCFF159OVE, ENCFF178PMH, ENCFF207OVG, ENCFF214IUN, ENCFF261OTH, ENCFF274WSX, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF310HPH, ENCFF326TQL, ENCFF344ILW, ENCFF345OIF, ENCFF351JWR, ENCFF363CYZ, ENCFF375EMG, ENCFF381JXP, ENCFF392TDB, ENCFF404PYQ, ENCFF445BBH, ENCFF470MXU, ENCFF478FDA, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF528CBF, ENCFF534DID, ENCFF623BKO, ENCFF670CXH, ENCFF711WAC, ENCFF755FCM, ENCFF775BPV, ENCFF813GGJ, ENCFF851ESH, ENCFF852ZDB, ENCFF878SQO, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF002SZY, ENCFF015JJB, ENCFF023TPS, ENCFF037GFB, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF065ZIE, ENCFF073RJJ, ENCFF080REY, ENCFF082BJV, ENCFF087IUJ, ENCFF103SQR, ENCFF120SMK, ENCFF133KGZ, ENCFF150HVU, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF172DMS, ENCFF177SGB, ENCFF187BHR, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF243LBQ, ENCFF243TPB, ENCFF275HRX, ENCFF278JAU, ENCFF279EVY, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF303BIV, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF341YZB, ENCFF344VGL, ENCFF348RRM, ENCFF352KGC, ENCFF369VAI, ENCFF380LXU, ENCFF397MUI, ENCFF411KCB, ENCFF424GQM, ENCFF429TQT, ENCFF476JSK, ENCFF478BEL, ENCFF490ULA, ENCFF497GLK, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF569ELL, ENCFF609WDV, ENCFF611OFH, ENCFF633QXI, ENCFF644GYU, ENCFF656DRS, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF699SBZ, ENCFF707HQI, ENCFF713JXV, ENCFF727EPG, ENCFF747VYT, ENCFF751QWY, ENCFF769FVU, ENCFF780UQU, ENCFF806XNV, ENCFF811ZQO, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF855UFX, ENCFF863LMG, ENCFF871CMC, ENCFF877VSZ, ENCFF921PGH, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF994PPZ, ENCFF999ZYF chr12 40000630 40000631 - Annotated LINE|L1|L1MD2 ENSMUSG00000114147.2, Gm18939 ENSMUST00000222820.2 chr12 41509852 41509853 + Predicted LINE|L1|L1MdF_III ENSMUSG00000056899.11, Immp2l SRR2089636, SRR2089637, SRR2089638, SRR2089647, SRR2089649, SRR2089651 chr12 42063515 42063516 - Predicted LTR|ERV1|RLTR41 ENSMUSG00000113370.2, Gm46348 DRR091690, DRR091691, SRR10697199, SRR15198217, SRR15198221, SRR15198222, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178977, SRR9178984, SRR9178988, SRR9178991 chr12 43080964 43081054 - Annotated LTR|ERVK|RLTR10B ENSMUSG00000112407.2, Gm33340 ENSMUST00000219846.2, ENSMUST00000219475.2, NR_148724.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643201, SRR6904685, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 44003495 44003496 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000111960.2, Gm46349 ENCFF001NCP, ENCFF001NDA, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002EZY, ENCFF027IIP, ENCFF092YWY, ENCFF102AMK, ENCFF102BWR, ENCFF106GQS, ENCFF221JNS, ENCFF426QFT, ENCFF452AXW, ENCFF521UGJ, ENCFF575RUC, ENCFF793IYH, ENCFF884TJE, ENCFF931DDH, ENCFF993QUE, ENCFF101BDM, ENCFF728TXU, ENCFF923VUD, ENCFF022ACG, ENCFF065UBR, ENCFF118YHP, ENCFF127KHN, ENCFF136TYP, ENCFF194DAO, ENCFF233RGQ, ENCFF399YLV, ENCFF437ZSM, ENCFF483KXD, ENCFF527XBQ, ENCFF696VQM, ENCFF698WQO, ENCFF832FTK, ENCFF853PNO, ENCFF875BUD, ENCFF935ZEM, ENCFF986DZE, ENCFF582WGH, DRR091694, DRR091698 chr12 44003575 44003631 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000111960.2, Gm46349 ENCFF001NCP, ENCFF001NDA, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002EZW, ENCFF002EZY, ENCFF027IIP, ENCFF040EEJ, ENCFF064PBF, ENCFF074HUJ, ENCFF083BIG, ENCFF092YWY, ENCFF102AMK, ENCFF105KSL, ENCFF106GQS, ENCFF106RGV, ENCFF114PSQ, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF147GLI, ENCFF160HKC, ENCFF162UVS, ENCFF221JNS, ENCFF251TMY, ENCFF279BVM, ENCFF289WHW, ENCFF291LRG, ENCFF295SYY, ENCFF319INV, ENCFF330LWU, ENCFF352VWM, ENCFF403ORF, ENCFF415KCJ, ENCFF426QFT, ENCFF432ZLQ, ENCFF450WAV, ENCFF452AXW, ENCFF489VZI, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF552NWL, ENCFF575RUC, ENCFF581WWO, ENCFF667FDW, ENCFF670YKO, ENCFF686EWL, ENCFF727WWV, ENCFF745HSV, ENCFF755IDE, ENCFF771LLL, ENCFF773VFS, ENCFF793CWJ, ENCFF793IYH, ENCFF828WIK, ENCFF844QDN, ENCFF881TID, ENCFF883UYA, ENCFF884TJE, ENCFF896IIZ, ENCFF896MQK, ENCFF906FNQ, ENCFF913CFN, ENCFF931DDH, ENCFF942WIP, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF985BLV, ENCFF993QUE, ENCFF101BDM, ENCFF728TXU, ENCFF923VUD, ENCFF002ZAX, ENCFF009AVK, ENCFF012KPC, ENCFF014CMK, ENCFF022ACG, ENCFF024CUG, ENCFF028XDY, ENCFF039DES, ENCFF049WBL, ENCFF065UBR, ENCFF068CQU, ENCFF077CYB, ENCFF098AYQ, ENCFF111MWQ, ENCFF118YHP, ENCFF124SSE, ENCFF127KHN, ENCFF136TYP, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF163BDT, ENCFF163GEC, ENCFF166UTY, ENCFF177LXI, ENCFF185TRT, ENCFF194DAO, ENCFF198XFF, ENCFF210BVU, ENCFF220GKL, ENCFF222MKT, ENCFF233RGQ, ENCFF237JCE, ENCFF239RQP, ENCFF242MZE, ENCFF247VEN, ENCFF254TFB, ENCFF260UQJ, ENCFF286RSE, ENCFF296ITI, ENCFF297PPT, ENCFF303BIV, ENCFF307OHZ, ENCFF310WDZ, ENCFF315HBU, ENCFF374VAZ, ENCFF378TYU, ENCFF386CRY, ENCFF399YLV, ENCFF403CRC, ENCFF404HLB, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF423GTP, ENCFF429ZEH, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF483KXD, ENCFF486BJT, ENCFF497KLL, ENCFF505YPK, ENCFF524PAV, ENCFF527XBQ, ENCFF543GNI, ENCFF549IDH, ENCFF561CZI, ENCFF572JDP, ENCFF572SQL, ENCFF573WSG, ENCFF578MOR, ENCFF591WVP, ENCFF601JTS, ENCFF632HDE, ENCFF635XED, ENCFF643SBQ, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF680OWA, ENCFF685GDB, ENCFF696VQM, ENCFF698WQO, ENCFF700IPC, ENCFF705CES, ENCFF711XWR, ENCFF742DJH, ENCFF755REI, ENCFF758BKM, ENCFF758IOS, ENCFF765AQX, ENCFF781XUM, ENCFF791ZDR, ENCFF812LAI, ENCFF812QQI, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF820JMO, ENCFF821HAZ, ENCFF832FTK, ENCFF843WRN, ENCFF845NUY, ENCFF847IGW, ENCFF848UMJ, ENCFF853PNO, ENCFF858OFI, ENCFF863ENS, ENCFF875BUD, ENCFF904KCQ, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF917KUH, ENCFF926IDV, ENCFF935ZEM, ENCFF938CNS, ENCFF949QCF, ENCFF951PCM, ENCFF953FGT, ENCFF964HGL, ENCFF985NHB, ENCFF986DZE, ENCFF994JUO, ENCFF996AOW, ENCFF996WVL, ENCFF998BIQ, ENCFF582WGH, DRR091694, DRR091698 chr12 44003697 44003705 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000111960.2, Gm46349 ENCFF002EZW, ENCFF040EEJ, ENCFF064PBF, ENCFF074HUJ, ENCFF083BIG, ENCFF105KSL, ENCFF106GQS, ENCFF106RGV, ENCFF114PSQ, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF147GLI, ENCFF160HKC, ENCFF162UVS, ENCFF251TMY, ENCFF279BVM, ENCFF289WHW, ENCFF291LRG, ENCFF295SYY, ENCFF319INV, ENCFF330LWU, ENCFF352VWM, ENCFF403ORF, ENCFF415KCJ, ENCFF432ZLQ, ENCFF450WAV, ENCFF489VZI, ENCFF522VLI, ENCFF524EDD, ENCFF552NWL, ENCFF581WWO, ENCFF667FDW, ENCFF670YKO, ENCFF686EWL, ENCFF727WWV, ENCFF745HSV, ENCFF755IDE, ENCFF764TGO, ENCFF771LLL, ENCFF773VFS, ENCFF793CWJ, ENCFF828WIK, ENCFF844QDN, ENCFF881TID, ENCFF883UYA, ENCFF896IIZ, ENCFF896MQK, ENCFF906FNQ, ENCFF913CFN, ENCFF942WIP, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF985BLV, ENCFF002ZAX, ENCFF009AVK, ENCFF012KPC, ENCFF014CMK, ENCFF024CUG, ENCFF028XDY, ENCFF039DES, ENCFF049WBL, ENCFF068CQU, ENCFF077CYB, ENCFF098AYQ, ENCFF111MWQ, ENCFF124SSE, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF163BDT, ENCFF163GEC, ENCFF166UTY, ENCFF177LXI, ENCFF185TRT, ENCFF198XFF, ENCFF210BVU, ENCFF220GKL, ENCFF222MKT, ENCFF237JCE, ENCFF239RQP, ENCFF242MZE, ENCFF247VEN, ENCFF254TFB, ENCFF260UQJ, ENCFF286RSE, ENCFF296ITI, ENCFF297PPT, ENCFF303BIV, ENCFF307OHZ, ENCFF310WDZ, ENCFF315HBU, ENCFF374VAZ, ENCFF378TYU, ENCFF386CRY, ENCFF397ZQU, ENCFF403CRC, ENCFF404HLB, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF423GTP, ENCFF429ZEH, ENCFF433QNW, ENCFF437QAE, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF486BJT, ENCFF497KLL, ENCFF505YPK, ENCFF524PAV, ENCFF543GNI, ENCFF549IDH, ENCFF561CZI, ENCFF572JDP, ENCFF572SQL, ENCFF573WSG, ENCFF578MOR, ENCFF591WVP, ENCFF601JTS, ENCFF632HDE, ENCFF635XED, ENCFF643SBQ, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF680OWA, ENCFF685GDB, ENCFF700IPC, ENCFF705CES, ENCFF711XWR, ENCFF742DJH, ENCFF755REI, ENCFF758BKM, ENCFF758IOS, ENCFF765AQX, ENCFF781XUM, ENCFF791ZDR, ENCFF812LAI, ENCFF812QQI, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF820JMO, ENCFF821HAZ, ENCFF843WRN, ENCFF845NUY, ENCFF847IGW, ENCFF848UMJ, ENCFF858OFI, ENCFF863ENS, ENCFF904KCQ, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF917KUH, ENCFF926IDV, ENCFF938CNS, ENCFF949QCF, ENCFF951PCM, ENCFF953FGT, ENCFF964HGL, ENCFF985NHB, ENCFF994JUO, ENCFF996AOW, ENCFF996WVL, ENCFF998BIQ chr12 44327260 44327261 + Predicted LINE|L1|Lx3_Mus ENSMUSG00000036257.16, Pnpla8 ENCFF307VAF, ENCFF319INV, ENCFF367BBB, ENCFF585YYC, ENCFF704GEB, ENCFF723QIC, ENCFF868XLZ, ENCFF881TID, ENCFF023MKT, ENCFF970VKB, ENCFF117ZMM, ENCFF254TFB, ENCFF378TYU, ENCFF420REU, ENCFF620FXM, ENCFF685FUZ, ENCFF687STH, ENCFF696XZL, ENCFF758JNE, ENCFF806MTS, ENCFF854LJN, ENCFF903KDM, ENCFF916JWW, ENCFF936DQW, ENCFF951PCM, ENCFF349AIG, ENCFF499GDC chr12 44342497 44342518 + Predicted LINE|L1|L1MdGf_I ENSMUSG00000036257.16, Pnpla8 ENCFF040EEJ, ENCFF126RJS, ENCFF198RBJ, ENCFF764ZUI, ENCFF982BLT, ENCFF060FGD, ENCFF220GKL, ENCFF297PPT, ENCFF301VMF, ENCFF498OHV, ENCFF518TUP, ENCFF536ZFC, ENCFF559QXN, ENCFF699SBZ, ENCFF817NCH, ENCFF854LJN, ENCFF856UMI, ENCFF881DTW chr12 4830501 4830521 + Predicted LTR|ERVL|HERVL40-int ENSMUSG00000091269.3, Gm6682 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR10697199, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080666, SRR9178979, SRR9178981, SRR9178985 chr12 50809457 50809458 + Predicted LINE|L1|L1MdF_V ENSMUSG00000112372.2, Gm48779 SRR2089609, SRR2089631, SRR2089636, SRR2089637, SRR2089639, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr12 51877622 51877652 - Predicted SINE|Alu|PB1D10 ENSMUSG00000035247.17, Hectd1 ENCFF027IIP, ENCFF308LTO, ENCFF352VWM, ENCFF367BBB, ENCFF385MVU, ENCFF734FHF, ENCFF907HVO, ENCFF962LFN, ENCFF374YTS, ENCFF654AEJ, ENCFF117ZMM, ENCFF237JCE, ENCFF285NFL, ENCFF358UHV, ENCFF377OQI, ENCFF789AOM, ENCFF804EWD, ENCFF881DTW, ENCFF525QIM chr12 52494907 52494908 - Annotated SINE|MIR|MIR ENSMUSG00000112139.2, Gm47431 ENSMUST00000218097.2 chr12 53459273 53459274 + Predicted SINE|MIR|MIR ENSMUSG00000021010.10, Npas3 SRR2089603, SRR2089608, SRR2089632, SRR2089645 chr12 53461016 53461017 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000021010.10, Npas3 SRR2089605, SRR2089606, SRR2089608, SRR2089609, SRR2089611, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089643, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr12 54916054 54916055 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000062929.9, Cfl2 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr12 56318434 56318435 - Predicted LTR|ERVK|RLTR20B2 ENSMUSG00000112211.3, Gm47682 SRR2089603, SRR2089606, SRR2089635, SRR2089637, SRR2089640, SRR2089650 chr12 65088897 65088899 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000035597.20, Prpf39 ENCFF108UNS, ENCFF151QHP, ENCFF160HKC, ENCFF207DLW, ENCFF304MIZ, ENCFF366BBB, ENCFF008YSM, ENCFF037LEJ, ENCFF090EUZ, ENCFF268YSJ, ENCFF305GPD, ENCFF346NGU, ENCFF350KYC, ENCFF386XTQ, ENCFF492HRC, ENCFF581ZWM, ENCFF663TDQ, ENCFF803ZUN, ENCFF861RRQ, ENCFF881DTW, ENCFF976SMI chr12 67698159 67698160 + Annotated LTR|ERVK|RMER19A ENSMUSG00000114010.2, Gm47432 ENSMUST00000222891.2 chr12 69176586 69176629 + Annotated SINE|MIR|MIRc ENSMUSG00000113158.2, Gm31447 ENSMUST00000222345.2, NR_168640.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 69253052 69253053 + Predicted SINE|B2|B3 ENSMUSG00000097061.3, 9330151L19Rik SRR2089610, SRR2089617, SRR2089647 chr12 69408254 69408255 - Annotated SINE|B4|ID_B1 ENSMUSG00000118841.1, Rn7s2 ENSMUST00000174924.4, NR_052008.1 chr12 69701104 69701215 - Predicted LINE|L1|L1M5 ENSMUSG00000034801.14, Sos2 ENCFF001NCP, ENCFF001NEC, ENCFF001RTN, ENCFF002DNB, ENCFF002DND, ENCFF002ERW, ENCFF005NBP, ENCFF027IIP, ENCFF043JGD, ENCFF056GXQ, ENCFF074HUJ, ENCFF083BIG, ENCFF083CUR, ENCFF084PUC, ENCFF086ZMV, ENCFF102AMK, ENCFF106GQS, ENCFF107XGE, ENCFF117BGT, ENCFF120DEX, ENCFF136POG, ENCFF159OVE, ENCFF192NVI, ENCFF196PBF, ENCFF212ZXS, ENCFF218HNK, ENCFF221JNS, ENCFF229AIZ, ENCFF251TMY, ENCFF262WAE, ENCFF273CJD, ENCFF289WHW, ENCFF295SYY, ENCFF312CZB, ENCFF319INV, ENCFF322VJD, ENCFF331WKS, ENCFF334RGJ, ENCFF347UAC, ENCFF358UFZ, ENCFF363CYZ, ENCFF367BBB, ENCFF379JPQ, ENCFF385MVU, ENCFF415KCJ, ENCFF421ACV, ENCFF443PSO, ENCFF453XOG, ENCFF462ABU, ENCFF472YPG, ENCFF495SQR, ENCFF524EDD, ENCFF535YBP, ENCFF544BEF, ENCFF554PUC, ENCFF560YXX, ENCFF570GTP, ENCFF600AGS, ENCFF606EDP, ENCFF621PKT, ENCFF622NXP, ENCFF641QXI, ENCFF667FDW, ENCFF670YKO, ENCFF672HUA, ENCFF698LQF, ENCFF705JRV, ENCFF723QIC, ENCFF725RXU, ENCFF743RQJ, ENCFF764ZUI, ENCFF773VFS, ENCFF783MLO, ENCFF784LWT, ENCFF793CWJ, ENCFF793STU, ENCFF795DLS, ENCFF813ZJI, ENCFF828WIK, ENCFF844KCR, ENCFF844QDN, ENCFF849GVQ, ENCFF858CRT, ENCFF868XLZ, ENCFF876MJS, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF896IIZ, ENCFF910ESY, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF946AGD, ENCFF951UXE, ENCFF960LQP, ENCFF962LFN, ENCFF972IVS, ENCFF979WZO, ENCFF985BLV, ENCFF994BOT, ENCFF033ZUH, ENCFF065LOT, ENCFF065TCZ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF223BXU, ENCFF271OHB, ENCFF478KOR, ENCFF487DYP, ENCFF533DWD, ENCFF567AFB, ENCFF573UIH, ENCFF581KUX, ENCFF595WXV, ENCFF608LAL, ENCFF651SDJ, ENCFF654AEJ, ENCFF657OJR, ENCFF725ATS, ENCFF766LGO, ENCFF860XMD, ENCFF914YDJ, ENCFF970VKB, ENCFF006JHA, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF016CHX, ENCFF019PVP, ENCFF022ACG, ENCFF027GCQ, ENCFF027QGO, ENCFF030IFE, ENCFF037LEJ, ENCFF039PJR, ENCFF045YRV, ENCFF047LTH, ENCFF054EOL, ENCFF065UBR, ENCFF066MTU, ENCFF066UDR, ENCFF067OYG, ENCFF077CYB, ENCFF077YZF, ENCFF078CCF, ENCFF080BTV, ENCFF082OML, ENCFF087XKQ, ENCFF088PZI, ENCFF098AYQ, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF117ZMM, ENCFF118YHP, ENCFF127KHN, ENCFF133PKQ, ENCFF134PXJ, ENCFF136TYP, ENCFF137OYQ, ENCFF139JTM, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF149JXW, ENCFF151XBP, ENCFF155GUC, ENCFF162FTA, ENCFF167EHX, ENCFF169JOQ, ENCFF174EGP, ENCFF175LCC, ENCFF177LXI, ENCFF184ALY, ENCFF186NDY, ENCFF189BIW, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF197TJB, ENCFF198XFF, ENCFF203EWG, ENCFF207HZS, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF237HDL, ENCFF239RQP, ENCFF242MZE, ENCFF247VEN, ENCFF248XZC, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF257EYD, ENCFF260BJB, ENCFF261EQP, ENCFF267VBU, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF273CBP, ENCFF276OPJ, ENCFF277JGD, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF296ITI, ENCFF301VMF, ENCFF303BIV, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF310WDZ, ENCFF315HBU, ENCFF324ITL, ENCFF331YYO, ENCFF335UNU, ENCFF338DAA, ENCFF343MZH, ENCFF346NGU, ENCFF350KYC, ENCFF353SEU, ENCFF357AGP, ENCFF363PDR, ENCFF366CSN, ENCFF366IEQ, ENCFF374VAZ, ENCFF378TYU, ENCFF386CRY, ENCFF386HCR, ENCFF386XTQ, ENCFF394AUR, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406NLL, ENCFF409ABB, ENCFF411YXB, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF423GTP, ENCFF426ZCK, ENCFF427YDU, ENCFF433QNW, ENCFF437ZSM, ENCFF439HXQ, ENCFF440IAL, ENCFF443URE, ENCFF450CUC, ENCFF454DOT, ENCFF456GLS, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF470RDW, ENCFF477MBL, ENCFF485GFE, ENCFF486GBM, ENCFF497KLL, ENCFF498OHV, ENCFF504PGI, ENCFF507VMW, ENCFF512LAN, ENCFF516QKR, ENCFF518TUP, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF531JWM, ENCFF536ZFC, ENCFF536ZVF, ENCFF538ZTW, ENCFF548HOL, ENCFF549IDH, ENCFF549KAB, ENCFF552LXG, ENCFF557JPW, ENCFF558UDY, ENCFF559QXN, ENCFF561CZI, ENCFF562MVN, ENCFF565CON, ENCFF565DII, ENCFF572SQL, ENCFF578YPJ, ENCFF580KHN, ENCFF584ZUK, ENCFF585CYT, ENCFF588JAU, ENCFF593TQB, ENCFF596PMK, ENCFF598BFX, ENCFF601JTS, ENCFF603QSQ, ENCFF612KDP, ENCFF618PVF, ENCFF620FXM, ENCFF632HDE, ENCFF635XED, ENCFF636SOT, ENCFF637GVH, ENCFF640RWH, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF647KBV, ENCFF651HEM, ENCFF655KBW, ENCFF657NUT, ENCFF658NHH, ENCFF661UPO, ENCFF663SPA, ENCFF667RGF, ENCFF673ZDG, ENCFF685FUZ, ENCFF694EPZ, ENCFF696VQM, ENCFF696XZL, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF711XWR, ENCFF712EKU, ENCFF717GIT, ENCFF724VJN, ENCFF726YTS, ENCFF735BVR, ENCFF741PLM, ENCFF753HNF, ENCFF754VQW, ENCFF755REI, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF759WDO, ENCFF764AQK, ENCFF770WIT, ENCFF772QLP, ENCFF789AOM, ENCFF791AUB, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF803ZUN, ENCFF804EWD, ENCFF812QQI, ENCFF814TTQ, ENCFF817HZQ, ENCFF818ZJQ, ENCFF820JMO, ENCFF821HAZ, ENCFF829WND, ENCFF832FTK, ENCFF840DKD, ENCFF840EFC, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF854LJN, ENCFF856UMI, ENCFF863ENS, ENCFF875BUD, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF885ZAO, ENCFF894COY, ENCFF896XAZ, ENCFF900LFN, ENCFF903KDM, ENCFF904KCQ, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF930JCE, ENCFF931NMQ, ENCFF934QGX, ENCFF935ZEM, ENCFF937KFC, ENCFF939QLN, ENCFF939UBM, ENCFF946LMX, ENCFF948BDY, ENCFF948YKH, ENCFF949QCF, ENCFF951GZB, ENCFF952EQQ, ENCFF952FJN, ENCFF955WXI, ENCFF958LRX, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF976SMI, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF996WVL, ENCFF062GNP, ENCFF075EMK, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF248ELC, ENCFF302TQH, ENCFF306ADU, ENCFF342GAL, ENCFF446LMP, ENCFF454JTI, ENCFF494ZWE, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF574YMK, ENCFF667KKO, ENCFF715CAJ, ENCFF904RJF, ENCFF906OAF, DRR091688, DRR091690, DRR091691, DRR091692, DRR091696, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697201, SRR10697203, SRR11428470, SRR13142122, SRR13142123, SRR15198219, SRR15198220, SRR15198221, SRR2040601, SRR2927112, SRR6904685 chr12 69701347 69701348 - Predicted SINE|Alu|B1F ENSMUSG00000034801.14, Sos2 ENCFF138QRF, ENCFF207DLW, ENCFF535YBP, ENCFF670YKO, ENCFF793CWJ, ENCFF195JLT, ENCFF234LUQ, ENCFF532UKS, ENCFF581KUX, ENCFF683CWD, ENCFF945ICZ, ENCFF039DES, ENCFF155GUC, ENCFF260BJB, ENCFF371ZDG, ENCFF417OEG, ENCFF477MBL, ENCFF507WIK, ENCFF529YFS, ENCFF584ZUK, ENCFF595NMM, ENCFF601JTS, ENCFF651HEM, ENCFF658NHH, ENCFF673BPE, ENCFF696VQM, ENCFF750IZJ, ENCFF814PHK, ENCFF910CTW, ENCFF008XVO, ENCFF075EMK, ENCFF342GAL, ENCFF442OKF, ENCFF454JTI, ENCFF494ZWE, ENCFF510AYI, ENCFF671TUD, ENCFF904RJF, DRR091689, DRR091697, SRR10697203, SRR13142123, SRR15198219 chr12 70918299 70918300 + Annotated LINE|L1|L1MA9 ENSMUSG00000048285.10, Frmd6 ENSMUST00000220515.2 SRR15198223, SRR15198225, SRR15198227, SRR2927113, SRR9178977, SRR9178982 chr12 70986716 70986717 + Annotated SINE|B2|B3 ENSMUSG00000021076.7, Actr10 ENSMUST00000223549.2 DRR091688, DRR091689, DRR091695, SRR10697195, SRR10697202, SRR11428467, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198220, SRR2927113, SRR5643190, SRR6338004, SRR6904684, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178982, SRR9178984, SRR9178985 chr12 72481421 72481437 + Predicted LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000021090.17, Lrrc9 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR6338004, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 76593799 76593818 + Annotated DNA|DNA|MER126 ENSMUSG00000052609.10, Plekhg3 ENSMUST00000218380.2, ENSMUST00000219751.2 chr12 76887069 76887070 + Annotated LTR|ERVL-MaLR|MTB_Mm ENSMUSG00000033373.17, Fntb ENSMUST00000123887.2 chr12 76908776 76908777 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000033373.17, Fntb DRR091693, DRR091698, DRR091699, SRR11428467, SRR13142118, SRR15198217, SRR15198218, SRR15198220, SRR15198223, SRR15198224, SRR15198227, SRR2927113, SRR9178982, SRR9178986 chr12 80897989 80897990 + Predicted LINE|L1|Lx5 ENSMUSG00000021133.10, Susd6 ENCFF002FAC, ENCFF993QUE, ENCFF134HVE, ENCFF223BXU, ENCFF261ZZF, ENCFF304DLW, ENCFF315OOH, ENCFF391UFN, ENCFF484HRX, ENCFF590LNP, ENCFF831ISX, ENCFF845NXM, ENCFF855FCX, ENCFF939IUH, ENCFF952BCB, ENCFF242SVY, SRR15198223 chr12 80991633 80991634 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000112880.3, Gm20337 ENCFF002FAG, ENCFF059IQN, ENCFF181RDS, ENCFF694NRG, ENCFF637PIP, DRR091688, DRR091689, DRR091690, DRR091691, DRR091694, DRR091696, DRR091697, SRR10697195, SRR10697200, SRR11428467, SRR11428469, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR9080665, SRR9080666, SRR9178979, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178989, SRR9178991, SRR9178992 chr12 82430911 82430939 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000042700.17, Sipa1l1 SRR2089608, SRR2089610, SRR2089620, SRR2089622, SRR2089629, SRR2089631, SRR2089632, SRR2089635, SRR2089636, SRR2089639, SRR2089641, SRR2089642, SRR2089643, SRR2089646 chr12 83677725 83677726 + Predicted LTR|ERVL|MT2_Mm ENSMUSG00000010608.16, Rbm25 ENCFF076CCZ, ENCFF130KZZ, ENCFF308LTO, ENCFF347UAC, ENCFF352VWM, ENCFF385MVU, ENCFF415KCJ, ENCFF544BEF, ENCFF902GVX, ENCFF052RNG, ENCFF149DFF, ENCFF155GUC, ENCFF443URE, ENCFF812QQI, SRR13142118, SRR15198225 chr12 83677922 83677923 + Predicted LTR|ERVL|MT2_Mm ENSMUSG00000010608.16, Rbm25 ENCFF102AMK, ENCFF107XGE, ENCFF147GLI, ENCFF168WHQ, ENCFF269UZL, ENCFF307VAF, ENCFF432ZLQ, ENCFF533NLR, ENCFF535YBP, ENCFF552NWL, ENCFF671ERF, ENCFF849GVQ, ENCFF896MQK, ENCFF972IVS, ENCFF054EOL, ENCFF082OML, ENCFF095NMU, ENCFF222MKT, ENCFF255ESE, ENCFF267VBU, ENCFF308WGP, ENCFF347EUO, ENCFF399YLV, ENCFF406NLL, ENCFF409ABB, ENCFF454DOT, ENCFF477MBL, ENCFF483KXD, ENCFF524PAV, ENCFF558UDY, ENCFF632HDE, ENCFF672WYO, ENCFF711OYQ, ENCFF735BVR, ENCFF779MMO, ENCFF804EWD, ENCFF849PKR, ENCFF952EQQ, ENCFF962ZCT, SRR9080665, SRR9080666 chr12 83680509 83680510 + Predicted SINE|MIR|MIRb ENSMUSG00000010608.16, Rbm25 SRR13142123, SRR15198219, SRR15198225, SRR15198226, SRR9178979 chr12 83778217 83778231 - Annotated SINE|Alu|PB1 ENSMUSG00000114050.2, Gm47666 ENSMUST00000222646.2 DRR091688, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428470, SRR13142118, SRR13142120, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR6904683, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178987 chr12 83858808 83858809 - Predicted SINE|B2|B3 ENSMUSG00000021224.16, Numb ENCFF273CJD, ENCFF462ABU, ENCFF522VLI, ENCFF913CFN, ENCFF003GJV, ENCFF012KPC, ENCFF039DES, ENCFF118PQI, ENCFF136DUH, ENCFF271RFU, ENCFF272VMY, ENCFF276OPJ, ENCFF306FQJ, ENCFF328TJH, ENCFF382VCK, ENCFF386HCR, ENCFF460FON, ENCFF505YPK, ENCFF515GXB, ENCFF533ZIO, ENCFF712EKU, ENCFF724VJN, ENCFF764AQK, ENCFF781XUM, ENCFF786BUI, ENCFF817HZQ, ENCFF845NUY, ENCFF950FFF, ENCFF951PCM chr12 84993686 84993731 - Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000042350.14, Arel1 ENSMUST00000169161.8, NM_001364190.1 DRR091688, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178990, SRR9178992 chr12 84994690 84994739 - Predicted DNA|hAT-Charlie|RMER30 ENSMUSG00000042350.14, Arel1 DRR091688, DRR091689, DRR091691, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697198, SRR11428470, SRR2927111, SRR2927112, SRR9080662, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991 chr12 85321060 85321061 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000045064.6, Zc2hc1c ENSMUST00000239335.2 SRR9178981, SRR9178982, SRR9178985 chr12 85422401 85422402 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000021248.10, Tmed10 ENCFF348VIH, ENCFF519IZA, ENCFF745HSV, ENCFF771LLL, ENCFF881TID, ENCFF883UYA, ENCFF917RNE, ENCFF141YUD, ENCFF277JGD, ENCFF286GUQ, ENCFF409ABB, ENCFF423GTP, ENCFF429ZEH, ENCFF507VMW, ENCFF529LEZ, ENCFF881DTW, ENCFF916BSM, ENCFF951PCM, ENCFF956RCJ chr12 85422637 85422638 - Predicted SINE|Alu|B1_Mur4 ENSMUSG00000021248.10, Tmed10 ENCFF284OMO, ENCFF743RQJ, ENCFF780TUN, ENCFF858CTQ, ENCFF016CHX, ENCFF030IFE, ENCFF047LTH, ENCFF108JLQ, ENCFF127DCC, ENCFF618PVF, ENCFF661TOM, ENCFF775OZV, ENCFF946LMX chr12 8561191 8561259 + Annotated LTR|ERVL-MaLR|MLT1H2 ENSMUSG00000112276.2, 5033421B08Rik ENSMUST00000219595.2 ENCFF007RPT, ENCFF027IIP, ENCFF059IQN, ENCFF064PBF, ENCFF074HUJ, ENCFF076CCZ, ENCFF083CUR, ENCFF090USB, ENCFF114PSQ, ENCFF116MYR, ENCFF159OVE, ENCFF179WPT, ENCFF212JFB, ENCFF221JIC, ENCFF262URV, ENCFF269UZL, ENCFF273CJD, ENCFF305IXM, ENCFF310HPH, ENCFF313ERY, ENCFF326TQL, ENCFF344ILW, ENCFF345OIF, ENCFF385GUJ, ENCFF385MVU, ENCFF392TDB, ENCFF403ORF, ENCFF415KCJ, ENCFF489VZI, ENCFF491XRO, ENCFF514BEA, ENCFF519IZA, ENCFF522VLI, ENCFF525POD, ENCFF528CBF, ENCFF535YBP, ENCFF565YHF, ENCFF593RAV, ENCFF645QUX, ENCFF667FDW, ENCFF670CXH, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF743RQJ, ENCFF755IDE, ENCFF764ZUI, ENCFF771LLL, ENCFF771YNG, ENCFF793CWJ, ENCFF795DLS, ENCFF828WIK, ENCFF858CTQ, ENCFF876MJS, ENCFF884DLS, ENCFF896MQK, ENCFF931HCN, ENCFF942WIP, ENCFF982BLT, ENCFF391UFN, ENCFF510TTU, ENCFF533DWD, ENCFF590LNP, ENCFF595WXV, ENCFF596QWT, ENCFF721ASG, ENCFF782NPY, ENCFF803VZZ, ENCFF978EQI, ENCFF012HVN, ENCFF014CMK, ENCFF019PVP, ENCFF027GBM, ENCFF028XDY, ENCFF039PJR, ENCFF043DTH, ENCFF047LTH, ENCFF052RNG, ENCFF066MTU, ENCFF073RJJ, ENCFF089SWU, ENCFF106GHS, ENCFF108JLQ, ENCFF111MWQ, ENCFF118YHP, ENCFF124SSE, ENCFF127KHN, ENCFF131VEF, ENCFF162FTA, ENCFF163BDT, ENCFF172DMS, ENCFF219PCN, ENCFF237JCE, ENCFF240OIM, ENCFF247VEN, ENCFF254VIN, ENCFF255ESE, ENCFF256UWN, ENCFF267KZS, ENCFF272WGJ, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF278JAU, ENCFF286GUQ, ENCFF310HAL, ENCFF311MZV, ENCFF315OFF, ENCFF338LFG, ENCFF341YZB, ENCFF346UBA, ENCFF353SEU, ENCFF376PQU, ENCFF380BYT, ENCFF380LXU, ENCFF386HCR, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF406NLL, ENCFF423GTP, ENCFF426ETE, ENCFF429ZEH, ENCFF430ERW, ENCFF439BEV, ENCFF456GLS, ENCFF466RIS, ENCFF477MBL, ENCFF482VRF, ENCFF483SQS, ENCFF484PQK, ENCFF487OHM, ENCFF490ULA, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF519AKK, ENCFF533ZIO, ENCFF536ZFC, ENCFF561CZI, ENCFF584OOK, ENCFF585CYT, ENCFF591WVP, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF606XHA, ENCFF640RWH, ENCFF643SBQ, ENCFF644EGG, ENCFF646GBS, ENCFF663SPA, ENCFF663TDQ, ENCFF673SLO, ENCFF687STH, ENCFF696XZL, ENCFF698WQO, ENCFF699SBZ, ENCFF705CES, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF746ZCS, ENCFF751QWY, ENCFF758BKM, ENCFF764AQK, ENCFF770WIT, ENCFF772QLP, ENCFF779MMO, ENCFF780UQU, ENCFF794GVC, ENCFF804EWD, ENCFF806MTS, ENCFF814PHK, ENCFF821HAZ, ENCFF829WND, ENCFF853PNO, ENCFF854LJN, ENCFF856UMI, ENCFF883APB, ENCFF886UAF, ENCFF903ULI, ENCFF906CJJ, ENCFF916BSM, ENCFF916JWW, ENCFF927LFD, ENCFF931NMQ, ENCFF934QGX, ENCFF952EQQ, ENCFF952FJN, ENCFF953WBM, ENCFF956RCJ, ENCFF958FDX, ENCFF958LRX, ENCFF960QTC, ENCFF974KKD, ENCFF976SMI, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF997QQG, ENCFF254YNR, ENCFF569XGG, ENCFF592WZB, ENCFF733LFV, SRR15198220 chr12 85806230 85806231 - Annotated LTR|ERVL|MER21C NR_168514.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198222, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 86020445 86020446 - Annotated DNA|hAT-Charlie|Charlie31a ENSMUSG00000121073.1, ENSMUSG00000121073 ENSMUST00000247074.1 chr12 8622155 8622156 + Annotated LTR|ERVK|ERVB7_2-LTR_MM ENSMUSG00000121137.1, ENSMUSG00000121137 ENSMUST00000247253.1 ENCFF001RTN chr12 8649065 8649066 - Annotated LTR|ERV1|RLTR5_Mm ENSMUSG00000020600.14, Slc7a15 ENSMUST00000036938.9, NM_177802.3 chr12 86780999 86781000 - Predicted SINE|5S-Deu-L2|AmnSINE1 ENSMUSG00000021257.15, Angel1 DRR091690, DRR091692, DRR091693, DRR091695, DRR091698, SRR11428468, SRR11428469, SRR13142122, SRR13142123, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR2927112, SRR3178204, SRR3178205, SRR6338004, SRR9080665, SRR9080666, SRR9178977, SRR9178979, SRR9178987, SRR9178991 chr12 87285505 87285552 - Annotated SINE|MIR|MIR1_Amn ENSMUSG00000072919.5, Noxred1 ENSMUST00000222480.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 87561086 87561087 + Annotated LTR|ERVL-MaLR|MTE2a ENSMUSG00000079034.3, Eif1ad8 ENSMUST00000110152.3, NM_001177565.1 ENCFF001NDA, ENCFF001NDD chr12 87665646 87665654 + Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000092019.5, Eif1ad6 ENCFF001NDA, ENCFF001NDD, ENCFF874ELO, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR9080662, SRR9080663, SRR9080665, SRR9080666 chr12 87695752 87695753 - Annotated LTR|ERVL|MT2B2 ENSMUSG00000113489.3, Ubl5b ENSMUST00000220528.3, NM_001166062.2 chr12 87840842 87840843 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000072905.6, Eif1ad3 ENSMUST00000110147.3, NM_001122662.1 chr12 88113649 88113660 + Predicted SINE|Alu|B1_Mm ENSMUSG00000114060.2, Gm18630 ENCFF027IIP, ENCFF051JSS, ENCFF074HTO, ENCFF094CCP, ENCFF140VGY, ENCFF142CUS, ENCFF178PMH, ENCFF261OTH, ENCFF310HPH, ENCFF470MXU, ENCFF482MUH, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF548SLN, ENCFF595GFM, ENCFF623BKO, ENCFF683RFI, ENCFF696TCH, ENCFF813GGJ, ENCFF878SQO, ENCFF933UPG, ENCFF143BIC, ENCFF173IVH, ENCFF269WEZ, ENCFF284AEN, ENCFF315OOH, ENCFF364LFJ, ENCFF446FOZ, ENCFF521NCL, ENCFF651SDJ, ENCFF670FEL, ENCFF697AST, ENCFF728TXU, ENCFF737OUQ, ENCFF775SSI, ENCFF845NXM, ENCFF854KNE, ENCFF855FCX, ENCFF952BCB, ENCFF975NCY, ENCFF106GHS, ENCFF118YHP, ENCFF177SGB, ENCFF205CDI, ENCFF310HAL, ENCFF380BYT, ENCFF426ETE, ENCFF469JWF, ENCFF541HSQ, ENCFF615ULR, ENCFF769FVU, ENCFF834TQY, ENCFF877VSZ, ENCFF956ZKG, ENCFF242SVY, ENCFF454JTI, ENCFF827NYZ, ENCFF906OAF chr12 88219639 88219640 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000095799.3, Eif1ad10 ENSMUST00000179468.3 ENCFF001NDA chr12 88598647 88598648 - Annotated DNA|hAT-Charlie|MER5B ENSMUSG00000113538.2, Gm48665 ENSMUST00000222755.2 DRR091698, SRR10697200, SRR9178983, SRR9178984, SRR9178989 chr12 8981874 8981875 + Predicted LINE|L1|L1MdA_VI ENSMUSG00000020585.6, Laptm4a ENCFF108UNS, ENCFF138TOM, ENCFF379JPQ, ENCFF522VLI, ENCFF565YHF, ENCFF789LUC, ENCFF504PGI, ENCFF695XIY, ENCFF964DLW chr12 90936689 90936743 + Annotated Retroposon|L1-dep|RMER1C ENSMUSG00000113747.2, 1700105G05Rik ENSMUST00000222238.2 DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR5643190, SRR6338004, SRR9080662, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 90936811 90936812 + Predicted Retroposon|L1-dep|RMER1C ENSMUSG00000113747.2, 1700105G05Rik DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697203, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR5643190, SRR9080662, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 91692685 91692719 - Predicted LTR|ERVK|RMER17C ENSMUSG00000020961.16, Ston2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr12 91755160 91755161 - Annotated LTR|ERVL|MT2A ENSMUSG00000020961.16, Ston2 ENSMUST00000166008.2 chr12 93441989 93441991 - Predicted LINE|L1|Lx ENSMUSG00000113164.2, 4930559C10Rik SRR2089603, SRR2089604, SRR2089605, SRR2089607, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr12 93442047 93442048 - Predicted LINE|L1|Lx ENSMUSG00000113164.2, 4930559C10Rik SRR2089603, SRR2089604, SRR2089605, SRR2089607, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr12 99609334 99609356 + Annotated LTR|ERVK|RLTR50A ENSMUSG00000113136.3, Gm19951 ENSMUST00000222616.3, NR_166738.1 ENCFF178HDG, ENCFF477YHR, ENCFF574YMK chr12 99928011 99928065 + Predicted LINE|L1|L1M5 ENSMUSG00000045404.17, Kcnk13 ENCFF027IIP, ENCFF059IQN, ENCFF074HTO, ENCFF090USB, ENCFF094CCP, ENCFF104LLO, ENCFF116MYR, ENCFF142CUS, ENCFF261OTH, ENCFF262URV, ENCFF296ASE, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF326TQL, ENCFF345OIF, ENCFF351JWR, ENCFF375EMG, ENCFF381JXP, ENCFF495YGN, ENCFF564YPB, ENCFF593RAV, ENCFF623BKO, ENCFF841OXD, ENCFF851ESH, ENCFF878SQO, ENCFF996STG, ENCFF027GBM, ENCFF053NFR, ENCFF083IRL, ENCFF088SVK, ENCFF094RHV, ENCFF163DKN, ENCFF177SGB, ENCFF267KZS, ENCFF278JAU, ENCFF296UDD, ENCFF321NRW, ENCFF338LFG, ENCFF357QTB, ENCFF408FFP, ENCFF426ETE, ENCFF426FAF, ENCFF430ERW, ENCFF476JSK, ENCFF482VRF, ENCFF596INO, ENCFF598WAL, ENCFF689RQK, ENCFF751QWY, ENCFF766UJI, ENCFF834TQY, ENCFF877VSZ, ENCFF955YCX, ENCFF970LRH, ENCFF983GRF, ENCFF994PPZ, SRR2927112 chr12 99928143 99928144 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000045404.17, Kcnk13 ENCFF074HTO, ENCFF104LLO, ENCFF116MYR, ENCFF142CUS, ENCFF261OTH, ENCFF296ASE, ENCFF297BEX, ENCFF310HPH, ENCFF351JWR, ENCFF375EMG, ENCFF381JXP, ENCFF623BKO, ENCFF841OXD, ENCFF053NFR, ENCFF083IRL, ENCFF088SVK, ENCFF094RHV, ENCFF163DKN, ENCFF177SGB, ENCFF267KZS, ENCFF278JAU, ENCFF296UDD, ENCFF321NRW, ENCFF338LFG, ENCFF408FFP, ENCFF476JSK, ENCFF596INO, ENCFF751QWY, ENCFF766UJI, ENCFF806XNV, ENCFF955YCX, ENCFF970LRH, ENCFF994PPZ chr12 99929971 99929974 + Predicted LINE|L1|L1ME2z ENSMUSG00000045404.17, Kcnk13 ENCFF206EGD, ENCFF404PYQ, ENCFF590NVM, ENCFF782JNB, ENCFF046HWP, ENCFF429ZEH, ENCFF478BEL, ENCFF548JDU, ENCFF633QXI, ENCFF644GYU, ENCFF877SON chr13 100338594 100338682 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000078945.11, Naip2 ENSMUST00000117913.8, NM_010872.3, NM_001126182.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DNB, ENCFF002ERU, ENCFF002ERW, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF083BIG, ENCFF083CUR, ENCFF084PUC, ENCFF086ZMV, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF168WHQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF264RIV, ENCFF265LKR, ENCFF273CJD, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF319INV, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF332ZPO, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF358UFZ, ENCFF363CYZ, ENCFF363XWU, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF400XLQ, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF432ZLQ, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF453XOG, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF472YPG, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF535YBP, ENCFF540XSD, ENCFF544BEF, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570GTP, ENCFF570KYE, ENCFF581WWO, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF764TGO, ENCFF771LLL, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF784LWT, ENCFF787LWL, ENCFF793CWJ, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844KCR, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF865WQE, ENCFF868XLZ, ENCFF874ELO, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931DDH, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF994BOT, ENCFF996STG, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF609ZVL, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF028XDY, ENCFF030IFE, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF039DES, ENCFF039PJR, ENCFF041PJP, ENCFF043DTH, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF061WTN, ENCFF064VAD, ENCFF065UBR, ENCFF065ZIE, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF087XKQ, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF090EUZ, ENCFF094RHV, ENCFF098AYQ, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF108JLQ, ENCFF111MWQ, ENCFF116QKZ, ENCFF118PQI, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF134PXJ, ENCFF136DUH, ENCFF136TYP, ENCFF137OYQ, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF151XBP, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF170KWW, ENCFF172DMS, ENCFF174EGP, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF186NDY, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197JAP, ENCFF197TJB, ENCFF198XFF, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF208BJY, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF256UWN, ENCFF258WLS, ENCFF260UQJ, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF292KWK, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF302MXO, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF310WDZ, ENCFF311MZV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF331YYO, ENCFF332IRR, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF369VAI, ENCFF370VOV, ENCFF374VAZ, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF386CRY, ENCFF386HCR, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF411YXB, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422CQE, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF439BEV, ENCFF443URE, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478YRJ, ENCFF479WHZ, ENCFF482VRF, ENCFF483KXD, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF486GBM, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF497NJW, ENCFF498OHV, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF530DUT, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF541HSQ, ENCFF543GNI, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF557JPW, ENCFF559QXN, ENCFF561CZI, ENCFF563FUC, ENCFF565CON, ENCFF566HCI, ENCFF569ELL, ENCFF572SQL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF581ZWM, ENCFF584OOK, ENCFF584ZUK, ENCFF591WVP, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF597BNT, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF611QZE, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF668SQN, ENCFF669PMR, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF673SLO, ENCFF680OWA, ENCFF680WIN, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF689RQK, ENCFF689UNV, ENCFF689ZLL, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF696TTO, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF755REI, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF759WDO, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF782CNW, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF794GVC, ENCFF794MMU, ENCFF801SNQ, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF825JNK, ENCFF829HAB, ENCFF830CBI, ENCFF832FTK, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF885ZAO, ENCFF886UAF, ENCFF894COY, ENCFF896XAZ, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF901KUE, ENCFF903KDM, ENCFF903ULI, ENCFF906CJJ, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF934VFW, ENCFF935ZEM, ENCFF936DQW, ENCFF936LNA, ENCFF938CNS, ENCFF938XTE, ENCFF939UBM, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF951PCM, ENCFF952EQQ, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955WXI, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF971DTR, ENCFF974KKD, ENCFF974XWJ, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF178HDG, ENCFF349AIG chr13 100382831 100382832 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000071203.7, Naip5 ENSMUST00000049789.3 ENCFF119KNP, ENCFF437AJW, ENCFF450WAV, ENCFF933MOZ, ENCFF116QKZ chr13 100383815 100383939 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000120924.1, ENSMUSG00000120924 ENSMUST00000246516.1, NM_010870.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DND, ENCFF002EZU, ENCFF005NBP, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF082HKQ, ENCFF083BIG, ENCFF083CUR, ENCFF084PUC, ENCFF086ZMV, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF143PHU, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF168WHQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF234MZC, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF264RIV, ENCFF265LKR, ENCFF269UZL, ENCFF273CJD, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330IYN, ENCFF330LWU, ENCFF331WKS, ENCFF332ZPO, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF358UFZ, ENCFF363XWU, ENCFF366BBB, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF400XLQ, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF449MIK, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF472YPG, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF486NGU, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF535YBP, ENCFF544BEF, ENCFF548SLN, ENCFF552DRF, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570GTP, ENCFF570KYE, ENCFF581WWO, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF621PKT, ENCFF622NXP, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764TGO, ENCFF764ZUI, ENCFF771LLL, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF784LWT, ENCFF789LUC, ENCFF792XYG, ENCFF793STU, ENCFF794FBC, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844KCR, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF863RVB, ENCFF865WQE, ENCFF868XLZ, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF886XAI, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF906FNQ, ENCFF907HVO, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931DDH, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ULS, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF994BOT, ENCFF996STG, ENCFF013CHH, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF442FJC, ENCFF455DHP, ENCFF510LAE, ENCFF521NCL, ENCFF572TOH, ENCFF581KUX, ENCFF609ZVL, ENCFF694NRG, ENCFF728TXU, ENCFF862FYE, ENCFF912MUD, ENCFF923VUD, ENCFF943XKB, ENCFF975NCY, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF008YSM, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF013SNI, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF027GCQ, ENCFF027QGO, ENCFF028XDY, ENCFF030IFE, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF039DES, ENCFF039PJR, ENCFF041PJP, ENCFF043DTH, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF060FGD, ENCFF061WTN, ENCFF064VAD, ENCFF065UBR, ENCFF065ZIE, ENCFF066UDR, ENCFF067OYG, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF080BTV, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF090EUZ, ENCFF094RHV, ENCFF095NMU, ENCFF098AYQ, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF117ZMM, ENCFF118PQI, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF134VWD, ENCFF136DUH, ENCFF137OYQ, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149DFF, ENCFF150HVU, ENCFF151XBP, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF167EHX, ENCFF167GWU, ENCFF169JOQ, ENCFF170KWW, ENCFF172DMS, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF185TRT, ENCFF186NDY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF197OUM, ENCFF197TJB, ENCFF198XFF, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF207HZS, ENCFF207RVA, ENCFF208BJY, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF256UWN, ENCFF257EYD, ENCFF258WLS, ENCFF260BJB, ENCFF260UQJ, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268YSJ, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF292KWK, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF310WDZ, ENCFF311MZV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF319YFJ, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332IRR, ENCFF332RWQ, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346NGU, ENCFF346UBA, ENCFF347EUO, ENCFF348RRM, ENCFF350KYC, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF366IEQ, ENCFF369VAI, ENCFF370VOV, ENCFF374VAZ, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF386CRY, ENCFF386HCR, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF394AUR, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406LFV, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF411YXB, ENCFF414IHO, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422CQE, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426ZCK, ENCFF427YDU, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF438ROC, ENCFF439BEV, ENCFF439HXQ, ENCFF440IAL, ENCFF443URE, ENCFF450CUC, ENCFF453MPR, ENCFF454DOT, ENCFF456GLS, ENCFF459TYQ, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF468RDR, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478MHH, ENCFF478YRJ, ENCFF479WHZ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF515GXB, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF529LEZ, ENCFF529YFS, ENCFF530DUT, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZFC, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF538ZTW, ENCFF541HSQ, ENCFF543GNI, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549IDH, ENCFF549KAB, ENCFF552KEA, ENCFF557JPW, ENCFF558UDY, ENCFF559QXN, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF565FFU, ENCFF566HCI, ENCFF572SQL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF584ZUK, ENCFF585CYT, ENCFF588JAU, ENCFF591WVP, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF603QSQ, ENCFF606XHA, ENCFF609WRW, ENCFF611OFH, ENCFF611QZE, ENCFF612KDP, ENCFF613SEJ, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637CVI, ENCFF637GVH, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF661TOM, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF668SQN, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF673SLO, ENCFF673ZDG, ENCFF678CRA, ENCFF680OWA, ENCFF680WIN, ENCFF681EEO, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF687STH, ENCFF689RQK, ENCFF691DJE, ENCFF693POR, ENCFF694EPZ, ENCFF695XIY, ENCFF696TTO, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF753HNF, ENCFF754VQW, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF759HJA, ENCFF759WDO, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF779MMO, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF782CNW, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF801SNQ, ENCFF803ZUN, ENCFF804EWD, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF825JNK, ENCFF829HAB, ENCFF829WND, ENCFF830CBI, ENCFF832FTK, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF885ZAO, ENCFF886UAF, ENCFF894COY, ENCFF894SHM, ENCFF896XAZ, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF901KUE, ENCFF903KDM, ENCFF903ULI, ENCFF904KCQ, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF930JCE, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF934VFW, ENCFF935ZEM, ENCFF936DQW, ENCFF936LNA, ENCFF937KFC, ENCFF938CNS, ENCFF938XTE, ENCFF939QLN, ENCFF939UBM, ENCFF946LMX, ENCFF948YKH, ENCFF950FFF, ENCFF951GZB, ENCFF951PCM, ENCFF952FJN, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955WXI, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958FDX, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974KKD, ENCFF974XWJ, ENCFF976SMI, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF062GNP, ENCFF302TQH, ENCFF720MPJ chr13 100383992 100383993 - Predicted LINE|L1|L1MdMus_I ENSMUSG00000071203.7, Naip5 ENCFF116MYR, ENCFF147GLI, ENCFF168WHQ, ENCFF289WHW, ENCFF313ERY, ENCFF347HAB, ENCFF349LIW, ENCFF367BBB, ENCFF379JPQ, ENCFF449MIK, ENCFF460NGS, ENCFF472YPG, ENCFF489VZI, ENCFF519IZA, ENCFF533NLR, ENCFF570GTP, ENCFF608NVM, ENCFF641QXI, ENCFF671ERF, ENCFF764EJV, ENCFF793STU, ENCFF868XLZ, ENCFF886XAI, ENCFF902GVX, ENCFF934ULS, ENCFF937GBW, ENCFF941QCZ, ENCFF946AGD, ENCFF728TXU, ENCFF002ZAX, ENCFF014CMK, ENCFF035BBA, ENCFF055PZZ, ENCFF087IUJ, ENCFF087OKI, ENCFF116DGU, ENCFF167GWU, ENCFF194DAO, ENCFF207HZS, ENCFF229TCX, ENCFF264PYB, ENCFF268YSJ, ENCFF306FQJ, ENCFF378TYU, ENCFF430ERW, ENCFF454DOT, ENCFF512XKX, ENCFF513BRJ, ENCFF522KWW, ENCFF524FJG, ENCFF529LEZ, ENCFF530DUT, ENCFF566HCI, ENCFF611QZE, ENCFF635XED, ENCFF657NUT, ENCFF673SLO, ENCFF673ZDG, ENCFF678CRA, ENCFF694EPZ, ENCFF759WDO, ENCFF764AQK, ENCFF766UJI, ENCFF769FVU, ENCFF772QLP, ENCFF817NCH, ENCFF818ZJQ, ENCFF840DKD, ENCFF847IGW, ENCFF851JLX, ENCFF875BUD, ENCFF877SON, ENCFF881YOK, ENCFF899EJT, ENCFF903ULI, ENCFF937KFC, ENCFF951PCM, ENCFF952FJN, ENCFF974KKD, ENCFF996WVL chr13 100453123 100453124 - Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000078942.11, Naip6 ENSMUST00000042220.3, NM_010871.2 ENCFF084PUC, ENCFF437AJW, ENCFF761RKP, ENCFF015JJB, ENCFF041PJP, ENCFF177SGB, ENCFF727EPG, ENCFF769FVU, ENCFF864DTX, ENCFF881YOK, ENCFF896XAZ chr13 100453183 100453184 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000078942.11, Naip6 ENCFF084PUC, ENCFF437AJW, ENCFF761RKP, ENCFF015JJB, ENCFF041PJP, ENCFF177SGB, ENCFF208BJY, ENCFF727EPG, ENCFF769FVU, ENCFF864DTX, ENCFF881YOK, ENCFF896XAZ chr13 100454180 100454269 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000078942.11, Naip6 ENSMUST00000118574.8 ENCFF001NCP, ENCFF001NCR, ENCFF001RTD, ENCFF001RTJ, ENCFF001RTN, ENCFF002DND, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF083BIG, ENCFF083CUR, ENCFF086ZMV, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF147GLI, ENCFF151QHP, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207DLW, ENCFF207OVG, ENCFF210BCB, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF234MZC, ENCFF251TMY, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF264RIV, ENCFF265LKR, ENCFF273CJD, ENCFF273TLO, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF332ZPO, ENCFF334RGJ, ENCFF345OIF, ENCFF347UAC, ENCFF348VIH, ENCFF349LIW, ENCFF352VWM, ENCFF358UFZ, ENCFF363CYZ, ENCFF363XWU, ENCFF366BBB, ENCFF367BBB, ENCFF371VGE, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF422ATU, ENCFF432ZLQ, ENCFF439OFV, ENCFF449MIK, ENCFF453XOG, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF472YPG, ENCFF482MUH, ENCFF486NGU, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF497YRP, ENCFF514BEA, ENCFF519IZA, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF525POD, ENCFF527VIY, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF535YBP, ENCFF540XSD, ENCFF544BEF, ENCFF552DRF, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564YPB, ENCFF565YHF, ENCFF570KYE, ENCFF581WWO, ENCFF585YYC, ENCFF589MBR, ENCFF590NVM, ENCFF593RAV, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF608NVM, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF764EJV, ENCFF764TGO, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF787LWL, ENCFF793CWJ, ENCFF793STU, ENCFF794FBC, ENCFF795DLS, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844KCR, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF865WQE, ENCFF868XLZ, ENCFF876MJS, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF906FNQ, ENCFF907HVO, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF931DDH, ENCFF931HCN, ENCFF931PFF, ENCFF934ULS, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF993QUE, ENCFF994BOT, ENCFF195JLT, ENCFF345BBC, ENCFF455DHP, ENCFF970VKB, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF008YSM, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF014CMK, ENCFF019PVP, ENCFF019PWU, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GCQ, ENCFF028XDY, ENCFF030IFE, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037IZV, ENCFF037LEJ, ENCFF039DES, ENCFF043DTH, ENCFF045YRV, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057MDU, ENCFF061WTN, ENCFF064VAD, ENCFF065UBR, ENCFF065ZIE, ENCFF067OYG, ENCFF068CQU, ENCFF073RJJ, ENCFF077CYB, ENCFF080BTV, ENCFF080DNG, ENCFF082OML, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF087XKQ, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF090EUZ, ENCFF095NMU, ENCFF098AYQ, ENCFF098TCZ, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF117ZMM, ENCFF118PQI, ENCFF118YHP, ENCFF124SSE, ENCFF126WDH, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF134VWD, ENCFF136DUH, ENCFF136TYP, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF149DFF, ENCFF151XBP, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163GEC, ENCFF166UTY, ENCFF167EHX, ENCFF167GWU, ENCFF169JOQ, ENCFF170KWW, ENCFF174EGP, ENCFF177LXI, ENCFF178ZXW, ENCFF179HJV, ENCFF186NDY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF197OUM, ENCFF198XFF, ENCFF203EWG, ENCFF207HZS, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF257EYD, ENCFF258WLS, ENCFF260BJB, ENCFF260UQJ, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF279EVY, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF296ITI, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF310WDZ, ENCFF311MZV, ENCFF315HBU, ENCFF315OFF, ENCFF319YFJ, ENCFF321NRW, ENCFF331YYO, ENCFF332IRR, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346NGU, ENCFF346UBA, ENCFF347EUO, ENCFF350KYC, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF358UHV, ENCFF363PDR, ENCFF366IEQ, ENCFF370VOV, ENCFF374VAZ, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF386HCR, ENCFF386XTQ, ENCFF387BVS, ENCFF394AUR, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF411YXB, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF439BEV, ENCFF439HXQ, ENCFF443URE, ENCFF450CUC, ENCFF453MPR, ENCFF454DOT, ENCFF456GLS, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF468RDR, ENCFF470RDW, ENCFF477MBL, ENCFF478MHH, ENCFF478YRJ, ENCFF479WHZ, ENCFF482VRF, ENCFF483KXD, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF486GBM, ENCFF490ULA, ENCFF492HRC, ENCFF497KLL, ENCFF498OHV, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF513BRJ, ENCFF515GXB, ENCFF516QKR, ENCFF517BAY, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZFC, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF538ZTW, ENCFF541HSQ, ENCFF543GNI, ENCFF548HOL, ENCFF548JDU, ENCFF549IDH, ENCFF549KAB, ENCFF552LXG, ENCFF557JPW, ENCFF558UDY, ENCFF559QXN, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF565FFU, ENCFF569ELL, ENCFF572JDP, ENCFF572SQL, ENCFF573WSG, ENCFF578MOR, ENCFF578YPJ, ENCFF581ZWM, ENCFF584ZUK, ENCFF585CYT, ENCFF591WVP, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF596PMK, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF611OFH, ENCFF611QZE, ENCFF612KDP, ENCFF613SEJ, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637PIP, ENCFF640RWH, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF661TOM, ENCFF661UPO, ENCFF663SPA, ENCFF667RGF, ENCFF668SQN, ENCFF669PMR, ENCFF672WYO, ENCFF673BPE, ENCFF673ZDG, ENCFF678CRA, ENCFF680OWA, ENCFF680WIN, ENCFF681EEO, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF687STH, ENCFF689RQK, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF696QTS, ENCFF696TTO, ENCFF696VQM, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF712EKU, ENCFF716NXU, ENCFF717GIT, ENCFF724VJN, ENCFF726YTS, ENCFF727JTZ, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF750IZJ, ENCFF751QWY, ENCFF755REI, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF759HJA, ENCFF759WDO, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF782CNW, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF801SNQ, ENCFF803ZUN, ENCFF804EWD, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF820JMO, ENCFF825JNK, ENCFF829HAB, ENCFF829WND, ENCFF832FTK, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF863ENS, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF875BUD, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF885ZAO, ENCFF886UAF, ENCFF894COY, ENCFF896XAZ, ENCFF899EJT, ENCFF900AIQ, ENCFF901KUE, ENCFF903KDM, ENCFF903ULI, ENCFF906CJJ, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF930JCE, ENCFF931NMQ, ENCFF932XKS, ENCFF935ZEM, ENCFF936DQW, ENCFF936LNA, ENCFF937KFC, ENCFF938CNS, ENCFF938XTE, ENCFF939QLN, ENCFF939UBM, ENCFF944RHJ, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF951PCM, ENCFF952EQQ, ENCFF953FGT, ENCFF955WXI, ENCFF956RCJ, ENCFF956ZKG, ENCFF958FDX, ENCFF958LRX, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970PLY, ENCFF974KKD, ENCFF974XWJ, ENCFF976SMI, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF178HDG, ENCFF477YHR chr13 100589371 100589377 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000021640.7, Naip1 ENSMUST00000222155.2, ENSMUST00000221727.2, NM_008670.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTD chr13 101397682 101397683 + Predicted LINE|L1|Lx5c ENSMUSG00000100733.3, 4932411K12Rik SRR11428468, SRR11428470, SRR15198224 chr13 102849651 102849652 + Predicted SINE|Alu|B1_Mm ENSMUSG00000021624.10, Cd180 ENCFF022ACG, ENCFF039DES, ENCFF144EDQ, ENCFF166UTY, ENCFF223SMG, ENCFF247VEN, ENCFF286GUQ, ENCFF311MZV, ENCFF403CRC, ENCFF423GTP, ENCFF429ZEH, ENCFF584ZUK, ENCFF655KBW, ENCFF791ZDR, ENCFF938CNS, ENCFF951PCM, ENCFF958FDX, ENCFF986DZE chr13 105429521 105429522 - Annotated LTR|ERV1|RLTR48A ENSMUSG00000021720.12, Rnf180 ENSMUST00000224011.2, NM_027934.2 ENCFF950FFF chr13 10604695 10604724 + Annotated LTR|ERVL-MaLR|MTE2a ENSMUSG00000097009.3, Gm26861 ENSMUST00000222066.2, ENSMUST00000221649.2, ENSMUST00000222633.2, ENSMUST00000223253.2 DRR091696, SRR10697197, SRR15198217, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR2040601, SRR9178985, SRR9178991 chr13 107170799 107170800 + Annotated LTR|ERVK|RLTR12BD_Mm ENSMUSG00000114893.3, Gm48684 ENSMUST00000245572.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF001RTJ, SRR2927111, SRR9178991 chr13 107200185 107200204 + Annotated LTR|ERVL-MaLR|MLT1L ENSMUSG00000114311.3, Gm31452 ENSMUST00000244905.1, ENSMUST00000224811.3, ENSMUST00000243600.1, ENSMUST00000224729.2, ENSMUST00000245537.1 ENCFF084DCW, ENCFF181RDS, ENCFF452AXW, ENCFF565YJQ chr13 107701822 107701831 - Annotated LTR|ERVK|RMER19A ENSMUSG00000114534.2, Gm32004 ENSMUST00000225322.2, ENSMUST00000224941.2, ENSMUST00000224033.2, ENSMUST00000224949.2 chr13 111361853 111361854 - Predicted LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000114824.2, 3110015C05Rik DRR091690, DRR091691, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697200, SRR10697203, SRR13142118, SRR13142120, SRR2040601, SRR2927112, SRR2927113, SRR9178976, SRR9178983, SRR9178988, SRR9178992 chr13 111626331 111626593 - Annotated LTR|ERVK|IAP1-MM_I ENSMUSG00000032745.19, Gpbp1 ENSMUST00000091236.11 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF082HKQ, ENCFF083BIG, ENCFF083CUR, ENCFF084PUC, ENCFF086ZMV, ENCFF089PFT, ENCFF089WMB, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF106GQS, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF198RBJ, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF265LKR, ENCFF269UZL, ENCFF273CJD, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF287KDR, ENCFF289WHW, ENCFF295SYY, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330IYN, ENCFF331WKS, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF348VIH, ENCFF351JWR, ENCFF352VWM, ENCFF358UFZ, ENCFF363CYZ, ENCFF363XWU, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF400XLQ, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF422ATU, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF452AXW, ENCFF453XOG, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF486NGU, ENCFF489IGD, ENCFF489VZI, ENCFF491XRO, ENCFF495SQR, ENCFF495YGN, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521IDK, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF535YBP, ENCFF544BEF, ENCFF548SLN, ENCFF552DRF, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570GTP, ENCFF570KYE, ENCFF575RUC, ENCFF581WWO, ENCFF585YYC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF605IFN, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF643VPC, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF696TCH, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764TGO, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF784LWT, ENCFF787LWL, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793IYH, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF868XLZ, ENCFF874ELO, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF885AJK, ENCFF886XAI, ENCFF888HEF, ENCFF888LGA, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF907HVO, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931DDH, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF962LFN, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF994BOT, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF233IFH, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF008YSM, ENCFF009AON, ENCFF009AVK, ENCFF013SNI, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF019PWU, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF027GCQ, ENCFF027QGO, ENCFF028XDY, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF060FGD, ENCFF061WTN, ENCFF064VAD, ENCFF065UBR, ENCFF065ZIE, ENCFF066MTU, ENCFF066UDR, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF077YZF, ENCFF080BTV, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF095NMU, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF118PQI, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF134PXJ, ENCFF134VWD, ENCFF136TYP, ENCFF137OYQ, ENCFF140WZW, ENCFF142PTA, ENCFF148BPZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF151XBP, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF166UTY, ENCFF167EHX, ENCFF167GWU, ENCFF170KWW, ENCFF172DMS, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF194DAO, ENCFF197JAP, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF207HZS, ENCFF207RVA, ENCFF208BJY, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF257EYD, ENCFF258WLS, ENCFF260BJB, ENCFF260UQJ, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268YSJ, ENCFF268ZHE, ENCFF271RFU, ENCFF272WGJ, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF310BWG, ENCFF310HAL, ENCFF311MZV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF319YFJ, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF331YYO, ENCFF332IRR, ENCFF332RWQ, ENCFF335UNU, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346UBA, ENCFF347EUO, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF366IEQ, ENCFF369VAI, ENCFF370VOV, ENCFF371ZDG, ENCFF374VAZ, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF383AJS, ENCFF386HCR, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF394AUR, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF411YXB, ENCFF414IHO, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422CQE, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF427YDU, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF438ROC, ENCFF439BEV, ENCFF443URE, ENCFF450CUC, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF485GFE, ENCFF486BJT, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF530DUT, ENCFF531JWM, ENCFF536ZFC, ENCFF536ZVF, ENCFF538AIM, ENCFF538TFM, ENCFF538ZTW, ENCFF541HSQ, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF552KEA, ENCFF552LXG, ENCFF557JPW, ENCFF558UDY, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF565FFU, ENCFF565YJQ, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF584ZUK, ENCFF585CYT, ENCFF587HBC, ENCFF588JAU, ENCFF591WVP, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF612KDP, ENCFF614WCH, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF633QXI, ENCFF635XED, ENCFF637CVI, ENCFF637GVH, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647KBV, ENCFF647RUH, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF661TOM, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF673ZDG, ENCFF680OWA, ENCFF680WIN, ENCFF681EEO, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF694EPZ, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF753HNF, ENCFF754VQW, ENCFF755REI, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF759HJA, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF779MMO, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF789AOM, ENCFF790WIY, ENCFF794GVC, ENCFF796TQV, ENCFF801SNQ, ENCFF803ZUN, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF829WND, ENCFF830CBI, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF881YOK, ENCFF886UAF, ENCFF894COY, ENCFF898CAY, ENCFF900AIQ, ENCFF903KDM, ENCFF904KCQ, ENCFF906CJJ, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF930JCE, ENCFF931NMQ, ENCFF932XKS, ENCFF934VFW, ENCFF936DQW, ENCFF936LNA, ENCFF938CNS, ENCFF938XTE, ENCFF946LMX, ENCFF948BDY, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951PCM, ENCFF952EQQ, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974XWJ, ENCFF976SMI, ENCFF983GRF, ENCFF985NHB, ENCFF986DZE, ENCFF994PPZ, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF667KKO, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR2040601, SRR2927111, SRR5643190, SRR5643192, SRR5643199, SRR6338004, SRR9080663, SRR9178991 chr13 111716795 111716796 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000086649.2, Gm15286 ENSMUST00000156236.2 ENCFF001NDD, ENCFF089PFT, ENCFF696TCH, SRR15198217, SRR15198221, SRR15198223, SRR15198225, SRR15198226, SRR2927111, SRR2927112 chr13 112142036 112142037 + Annotated LINE|L1|Lx9 ENSMUSG00000086092.2, Gm15323 ENSMUST00000156109.2 chr13 112319049 112319055 + Predicted LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000120592.1, ENSMUSG00000120592 DRR091689, DRR091690, DRR091692, DRR091694, DRR091695, DRR091696, SRR10697197, SRR10697198, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178989, SRR9178990, SRR9178991 chr13 113272610 113272648 + Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000114333.2, 1700084D21Rik ENSMUST00000226043.2, NR_131045.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR6338004, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 113797351 113797376 + Predicted LTR|ERVK|RLTR31B2 ENSMUSG00000114417.2, Gm34586 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 114743619 114743668 - Annotated LTR|ERV1|LTR78 ENSMUSG00000114879.2, 4930467J12Rik ENSMUST00000224961.2, NR_152116.1 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr13 117266561 117266564 + Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000114792.2, Gm6416 ENSMUST00000224375.2, NR_046023.1 ENCFF868WEJ chr13 117856525 117856541 - Predicted LINE|L1|Lx3_Mus ENSMUSG00000079048.9, 4933413L06Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 12288981 12288982 - Annotated SINE|Alu|B1F2 ENSMUSG00000052374.17, Actn2 ENSMUST00000222034.2 ENCFF671TUD chr13 13209424 13209456 + Predicted LTR|ERVK|IAPLTR3 ENSMUSG00000113049.2, Gm48544 ENSMUST00000223084.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR3178206, SRR5643199, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178991, SRR9178992 chr13 14234042 14234043 - Predicted SINE|B4|RSINE1 ENSMUSG00000021302.11, Ggps1 ENCFF002FAA, ENCFF225MMR, ENCFF450WAV, ENCFF595GFM, ENCFF802GAN, ENCFF851ESH, ENCFF643XFK, ENCFF598LJF chr13 16101238 16101264 - Predicted LINE|L1|L1MdF_I ENSMUSG00000113701.3, B230303A05Rik ENSMUST00000221744.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 17975915 17975916 - Annotated LINE|L2|L2b ENSMUSG00000041297.9, Cdk13 ENSMUST00000222800.2 DRR091693, SRR5643190 chr13 18167117 18167118 - Annotated SINE|B4|RSINE1 ENSMUSG00000113030.2, Gm48778 ENSMUST00000223489.2 DRR091690, DRR091691, DRR091694, DRR091696, SRR10697198, SRR9178982, SRR9178989 chr13 19688514 19688537 - Annotated LINE|L1|Lx8 ENSMUSG00000114189.2, 9330199G10Rik ENSMUST00000221607.2, ENSMUST00000221601.2, NR_131038.1, NR_131037.1 chr13 19873780 19873781 - Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000041138.17, Nme8 ENSMUST00000144820.3 chr13 20302905 20302906 + Predicted LINE|L1|Lx9 ENSMUSG00000041112.18, Elmo1 ENCFF519IZA, ENCFF106RLX, ENCFF134PXJ, ENCFF163BDT, ENCFF239RQP, ENCFF296ITI, ENCFF308WGP, ENCFF397ZQU, ENCFF406NLL, ENCFF420REU, ENCFF422ZNC, ENCFF513BRJ, ENCFF524PAV, ENCFF529LEZ, ENCFF538ZTW, ENCFF635XED, ENCFF651HEM, ENCFF655KBW, ENCFF678CRA, ENCFF758IOS, ENCFF814TTQ, ENCFF875BUD, ENCFF984QED chr13 24051733 24051734 + Annotated SINE|B2|B3A ENSMUSG00000021335.14, Slc17a1 ENSMUST00000130211.8 chr13 24119446 24119447 - Predicted SINE|B2|B3A ENSMUSG00000050799.4, H2bc1 DRR091688, DRR091692, DRR091693, DRR091695, SRR10697195, SRR10697197, SRR10697198, SRR11428467, SRR11428470, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178992 chr13 24513022 24513023 - Annotated LTR|LTR|RLTR4_MM-int ENSMUSG00000118631.3, Gm53019 ENSMUST00000239334.3 chr13 25089576 25089607 + Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000086796.3, 4932702P03Rik ENSMUST00000151220.2, ENSMUST00000138447.2, ENSMUST00000225028.2, NR_045182.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643199, SRR6338004, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 26257428 26257429 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000060198.8, ENSMUSG00000084358.2, Gm11353, Gm11352 ENCFF221NAP, ENCFF452AXW, ENCFF885AJK, ENCFF389ZWR, ENCFF407JTK, ENCFF689ZLL chr13 26353741 26353742 + Predicted LINE|L1|Lx2 ENSMUSG00000084358.2, Gm11352 SRR2089603, SRR2089605, SRR2089606, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089623, SRR2089629, SRR2089631, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr13 27380642 27380644 + Annotated LTR|ERVL|RMER15 ENSMUSG00000017922.15, Prl3c1 ENSMUST00000018066.13, NM_013766.2 chr13 28033385 28033386 + Annotated LTR|ERVL|RMER15 ENSMUSG00000062551.14, Prl2c1 ENSMUST00000054932.13 chr13 33749269 33749270 - Predicted LTR|ERVK|RMER17A-int ENSMUSG00000112963.2, Gm6093 SRR15198217, SRR15198224, SRR15198228 chr13 33753299 33753300 - Annotated LTR|ERV1|RLTR48A ENSMUSG00000112963.2, Gm6093 ENSMUST00000222963.2, NR_131141.1 ENCFF001RTF, ENCFF001RTJ, SRR11428469 chr13 34151040 34151059 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000046949.17, Nqo2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 35396002 35396036 - Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000113770.2, 1700019C18Rik ENSMUST00000222085.2, ENSMUST00000220954.2, NR_126478.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 36142822 36142823 + Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000050423.12, Ppp1r3g ENSMUST00000225537.2 chr13 37339994 37339995 + Annotated LTR|LTR|Eutr18 ENSMUSG00000114428.2, Gm47707 ENSMUST00000225257.2 SRR11428467, SRR13142120, SRR15198217, SRR15198226, SRR2927112, SRR2927113, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178992 chr13 3875509 3875523 + Predicted SINE|MIR|MIRb ENSMUSG00000114091.2, Gm40655 ENSMUST00000220802.2 DRR091688, DRR091694, DRR091698, SRR10697199, SRR10697201, SRR11428468, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080666, SRR9178981, SRR9178982, SRR9178985, SRR9178989, SRR9178990, SRR9178992 chr13 41106891 41106892 + Annotated DNA|hAT-Charlie|MER20 ENSMUSG00000021360.17, Gcnt2 ENSMUST00000225996.2 chr13 41154300 41154301 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000038683.17, Pak1ip1 ENCFF521UGJ, ENCFF775RSS, ENCFF915FID, ENCFF170XMM, ENCFF103SQR, ENCFF120SMK, ENCFF194DAO, ENCFF348RRM, ENCFF581RIR, ENCFF769FVU, ENCFF838BEV, ENCFF986DZE, DRR091690, SRR9080665 chr13 41264510 41264511 - Annotated LINE|L2|AmnL2-1 ENSMUSG00000021362.8, Gcm2 ENSMUST00000225271.2 chr13 41954116 41954133 - Predicted LTR|ERVL-MaLR|MLT1A1 ENSMUSG00000058022.15, Adtrp DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990 chr13 45341212 45341236 - Predicted SINE|B4|B4 ENSMUSG00000098136.2, Gm8513 SRR2089614, SRR2089616, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr13 45557354 45557366 + Predicted LINE|L1|L1MdV_I ENSMUSG00000038175.11, Mylip ENCFF083CUR, ENCFF126RJS, ENCFF136POG, ENCFF207DLW, ENCFF352VWM, ENCFF358UFZ, ENCFF379JPQ, ENCFF560YXX, ENCFF643VPC, ENCFF743RQJ, ENCFF844KCR, ENCFF876MJS, ENCFF931HCN, ENCFF008YSM, ENCFF134PXJ, ENCFF242MZE, ENCFF254VIN, ENCFF268YSJ, ENCFF292KWK, ENCFF305GPD, ENCFF324ITL, ENCFF438ROC, ENCFF460VXC, ENCFF485GFE, ENCFF533ZIO, ENCFF585CYT, ENCFF613YNK, ENCFF635XED, ENCFF668SQN, ENCFF673BPE, ENCFF673SLO, ENCFF687STH, ENCFF746ZCS, ENCFF764AQK, ENCFF840DKD, ENCFF948BDY, ENCFF958LRX chr13 46089514 46089534 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000113987.2, 4930453C13Rik ENSMUST00000222376.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 46895892 46895893 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000021374.11, Nup153 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091699, SRR10697199, SRR10697203, SRR11428468, SRR11428470, SRR13142118, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR2927111, SRR2927113, SRR5643190, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178982, SRR9178985 chr13 46895969 46895970 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000021374.11, Nup153 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697199, SRR10697203, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927113, SRR5643190, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178981, SRR9178982, SRR9178985 chr13 47049589 47049590 - Predicted LTR|ERVL|RMER15 ENSMUSG00000021375.12, Kif13a SRR15198219, SRR15198222, SRR9178984, SRR9178990 chr13 47158779 47158782 + Predicted LTR|ERVK|RMER19B ENSMUSG00000051606.7, 2010001K21Rik ENCFF059IQN, ENCFF116MYR, ENCFF142CUS, ENCFF310HPH, ENCFF326TQL, ENCFF390QUP, ENCFF495YGN, ENCFF504ULZ, ENCFF590NVM, ENCFF670CXH, ENCFF922KQY, ENCFF267KZS, ENCFF430ERW, ENCFF512XKX, ENCFF633QXI, ENCFF637PIP, ENCFF698WQO, ENCFF727EPG, ENCFF806XNV chr13 4775464 4775465 + Predicted LTR|ERVK|RMER17A ENSMUSG00000113717.2, Gm40658 DRR091688, DRR091689, DRR091691, DRR091692, DRR091695, DRR091699, SRR10697195, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178988, SRR9178990, SRR9178991 chr13 4775584 4775608 + Predicted LTR|ERVK|RMER17A ENSMUSG00000113717.2, Gm40658 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR15198218, SRR15198219, SRR15198221, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178989, SRR9178990 chr13 49706374 49706375 - Predicted LTR|ERVL-MaLR|MTEa ENSMUSG00000021391.11, Cenpp SRR2089605, SRR2089606, SRR2089622, SRR2089623, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr13 51889919 51889920 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000021451.17, Sema4d ENCFF273TLO, ENCFF039DES, ENCFF068KDU, ENCFF089SWU, ENCFF166UTY, ENCFF248XZC, ENCFF301VMF, ENCFF581ZWM, ENCFF657NUT, ENCFF668SQN, ENCFF875BUD, ENCFF927LFD chr13 52250756 52250797 + Annotated LINE|L1|Lx8 ENSMUSG00000113211.3, 4921525O09Rik ENSMUST00000220691.3, NR_045061.1 ENCFF001NDA, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643192, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178983, SRR9178984, SRR9178986, SRR9178990 chr13 52685314 52685315 - Annotated LTR|ERVL-MaLR|MTE2a ENSMUSG00000047842.8, Diras2 ENSMUST00000057442.8 chr13 52727248 52727318 - Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000120488.1, Gm2848 ENSMUST00000243659.1, ENSMUST00000246759.1, NR_046069.1 ENCFF001NCP, ENCFF001NDA, ENCFF001NDD, ENCFF027BYX, ENCFF027IIP, ENCFF059IQN, ENCFF074HTO, ENCFF084PUC, ENCFF091WMS, ENCFF094CCP, ENCFF115KZV, ENCFF119KNP, ENCFF121BYS, ENCFF139MHN, ENCFF178ZVU, ENCFF179WPT, ENCFF192NVI, ENCFF207OVG, ENCFF214IUN, ENCFF218HNK, ENCFF262URV, ENCFF274WSX, ENCFF289WHW, ENCFF297CWJ, ENCFF326TQL, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF363CYZ, ENCFF371VGE, ENCFF390QUP, ENCFF478FDA, ENCFF527VIY, ENCFF533JUU, ENCFF534DID, ENCFF564YPB, ENCFF590NVM, ENCFF605IFN, ENCFF641QXI, ENCFF670CXH, ENCFF683RFI, ENCFF711WAC, ENCFF725RXU, ENCFF775BPV, ENCFF851ESH, ENCFF915FID, ENCFF931PFF, ENCFF935XRF, ENCFF937GBW, ENCFF989HJD, ENCFF993QUE, ENCFF023MKT, ENCFF002SZY, ENCFF033DWC, ENCFF057FFG, ENCFF083IRL, ENCFF158HQO, ENCFF243LBQ, ENCFF258WLS, ENCFF267KZS, ENCFF279EVY, ENCFF291SCS, ENCFF299ENO, ENCFF313IFI, ENCFF332IRR, ENCFF338LFG, ENCFF346HDC, ENCFF359DNK, ENCFF390AUP, ENCFF454DOT, ENCFF459TYQ, ENCFF482VRF, ENCFF490ULA, ENCFF505WKA, ENCFF517EJZ, ENCFF538AIM, ENCFF543PXT, ENCFF552KEA, ENCFF591WVP, ENCFF596INO, ENCFF611OFH, ENCFF614WCH, ENCFF619SKV, ENCFF644GYU, ENCFF680WIN, ENCFF689RQK, ENCFF693POR, ENCFF698WQO, ENCFF705CES, ENCFF707HQI, ENCFF712BKP, ENCFF716NXU, ENCFF737VKP, ENCFF747VYT, ENCFF751QWY, ENCFF765UBL, ENCFF780UQU, ENCFF801SNQ, ENCFF806XNV, ENCFF830CBI, ENCFF864DTX, ENCFF956ZKG, ENCFF178HDG, ENCFF574YMK, ENCFF854IBU chr13 53077879 53077904 - Annotated LINE|L1|L1MC ENSMUSG00000021460.18, Auh ENSMUST00000132598.8, ENSMUST00000142515.8, ENSMUST00000133906.8, ENSMUST00000153329.2 chr13 53323708 53323709 - Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000021464.16, Ror2 DRR091688, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091698, SRR10697195, SRR10697197, SRR11428467, SRR11428470, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR9080664, SRR9178977, SRR9178982, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178991 chr13 53547618 53547726 + Annotated LTR|ERV1|MER57D ENSMUSG00000107008.5, Gm2762 ENSMUST00000246406.1, ENSMUST00000245693.1, ENSMUST00000202976.4, ENSMUST00000201658.4, ENSMUST00000201517.4, NR_037991.1 ENCFF001NDA, ENCFF002EZU, ENCFF002FAE, ENCFF005GQR, ENCFF156YWS, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF408NBX, ENCFF500QZK, ENCFF572TOH, ENCFF647TTU, ENCFF654AEJ, ENCFF670VVN, ENCFF803OIY, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 54069702 54069703 - Predicted LTR|ERVK|RMER19C ENSMUSG00000114069.3, E130119H09Rik ENCFF002FAA, ENCFF134HVE, ENCFF236TUH, ENCFF467LJD, ENCFF592GVA, ENCFF657UWH, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF868WEJ, ENCFF920FVY, ENCFF160TQC, ENCFF199IWW, ENCFF423TSB, ENCFF641WPY chr13 54069759 54069782 - Annotated LTR|ERVK|RMER19C ENSMUSG00000114069.3, E130119H09Rik ENSMUST00000243613.1, NR_152124.1 ENCFF002FAA, ENCFF134HVE, ENCFF236TUH, ENCFF467LJD, ENCFF592GVA, ENCFF657UWH, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF868WEJ, ENCFF920FVY, ENCFF160TQC, ENCFF199IWW, ENCFF423TSB, ENCFF641WPY chr13 54702971 54702972 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000025871.19, 4833439L19Rik ENCFF002DNB, SRR3178203, SRR3178204, SRR3178206, SRR9178981 chr13 5504933 5504967 + Predicted LTR|ERVK|RLTR10C ENSMUSG00000114098.2, Gm40660 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697198, SRR10697200, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR9178978, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178988, SRR9178990, SRR9178992 chr13 5513012 5513013 + Predicted LINE|L1|Lx6 ENSMUSG00000114098.2, Gm40660 SRR10697199, SRR15198220, SRR15198226, SRR15198227, SRR6338004 chr13 55242218 55242219 - Annotated LINE|L1|L1M4 NM_001359757.1, NM_001359758.1 ENCFF489IGD, ENCFF874ELO, ENCFF302KQL, DRR091688, DRR091691, SRR10697196, SRR15198219 chr13 55770111 55770112 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000021501.5, Caml DRR091693, SRR10697200, SRR11428470, SRR13142118, SRR13142119, SRR15198219, SRR15198223, SRR15198228, SRR6338004, SRR9080665, SRR9178987 chr13 58155665 58155676 - Predicted LINE|RTE-BovB|MamRTE1 ENSMUSG00000014164.16, Klhl3 DRR091688, DRR091689, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697201, SRR10697202, SRR10697203, SRR11428469, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198227, SRR2040601, SRR2927111, SRR2927113, SRR5643190, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178978, SRR9178980, SRR9178982, SRR9178985, SRR9178986, SRR9178987, SRR9178991 chr13 58910124 58910174 - Annotated LTR|ERVL-MaLR|MLT1G ENSMUSG00000114384.2, 4930455J16Rik ENSMUST00000223707.2, ENSMUST00000225693.2, ENSMUST00000224184.2, ENSMUST00000223974.2, ENSMUST00000224680.2, NR_045469.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 58945261 58945262 - Annotated LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000114231.2, Gm40968 ENSMUST00000223670.2 SRR2927111 chr13 58974807 58974809 - Annotated LINE|RTE-X|L4_C_Mam ENSMUSG00000114218.2, Gm47423 ENSMUST00000225867.2 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091699, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR11428467, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198224, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178977, SRR9178983, SRR9178984, SRR9178989 chr13 5965792 5965828 + Annotated SINE|B4|B4 ENSMUSG00000113017.2, Gm46401 ENSMUST00000223425.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR9178981, SRR9178982, SRR9178985 chr13 59855259 59855260 - Predicted LTR|ERVL-MaLR|ORR1G ENSMUSG00000050876.10, Spata31d1a SRR2927113, SRR9178984, SRR9178992 chr13 61075900 61075901 + Annotated LINE|L1|L1MdFanc_II ENSMUSG00002075540.1, Gm55544 ENSMUST00020182884.1 chr13 61103033 61103034 + Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000114502.2, Gm40975 ENSMUST00000224761.2 chr13 62607943 62607944 - Predicted LINE|L1|L1MdF_I ENSMUSG00000113450.2, Zfp935 ENCFF284OMO, ENCFF605IFN, ENCFF734FHF, ENCFF743RQJ, ENCFF883UYA, ENCFF127KHN, ENCFF558UDY, ENCFF613SEJ, ENCFF765AQX, ENCFF814TTQ, ENCFF848UMJ chr13 62823599 62823600 - Predicted SINE|Alu|B1_Mm ENSMUSG00000074863.6, Platr25 ENCFF002ERU, ENCFF027IIP, ENCFF040EEJ, ENCFF198NQV, ENCFF453XOG, ENCFF755IDE, ENCFF884TJE, ENCFF896MQK, ENCFF951UXE, ENCFF454ZUS, ENCFF487DYP, ENCFF775SSI, ENCFF039DES, ENCFF162FTA, ENCFF254TFB, ENCFF260UQJ, ENCFF276OPJ, ENCFF439BEV, ENCFF505YPK, ENCFF529LEZ, ENCFF549IDH, ENCFF585CYT, ENCFF591WVP, ENCFF598PMW, ENCFF698XCB, ENCFF755REI, ENCFF765AQX, ENCFF845NUY, ENCFF974KKD, ENCFF976SMI chr13 65455606 65455607 + Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000114194.2, Gm3800 DRR091689, DRR091693, DRR091696, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR2040601, SRR2927113 chr13 67208569 67208570 + Annotated LINE|L1|Lx8 ENSMUSG00000114516.2, Gm46440 ENSMUST00000224641.2 DRR091689, DRR091691, DRR091693, DRR091697, SRR10697202, SRR11428467, SRR9178981, SRR9178984, SRR9178985, SRR9178989 chr13 67701694 67701695 + Predicted SINE|Alu|PB1D11 ENSMUSG00000097360.9, 9430065F17Rik DRR091690, DRR091695, DRR091696, SRR15198218, SRR15198219, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR2927112 chr13 68382849 68382850 - Annotated LTR|LTR|RLTR4_MM-int NR_155295.1 chr13 68742847 68742848 - Predicted LINE|L1|Lx4A ENSMUSG00000112985.2, Gm48556 SRR13142118, SRR9178980, SRR9178987, SRR9178989, SRR9178992 chr13 69218062 69218098 - Annotated LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000120037.1, ENSMUSG00000120037 ENSMUST00000241866.1, ENSMUST00000245030.1, ENSMUST00000243732.1, ENSMUST00000245276.1, ENSMUST00000241105.1, ENSMUST00000244967.1, ENSMUST00000244878.1, ENSMUST00000246349.1 chr13 69289315 69289349 + Annotated LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000097522.2, Gm26844 ENSMUST00000181690.2, NR_166905.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 70107941 70107965 + Annotated LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000113802.2, 4933416O17Rik ENSMUST00000220972.2, NR_138559.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927113, SRR5643190, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 70721343 70721445 + Annotated LTR|ERVL-MaLR|MTE-int ENSMUSG00000101051.7, 1700100L14Rik ENSMUST00000187681.7, ENSMUST00000189028.2, NR_045934.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 70721679 70721680 + Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000101051.7, 1700100L14Rik DRR091688, DRR091690, DRR091691, DRR091697, SRR10697195, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR13142119, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR2927112, SRR9080662, SRR9080664, SRR9178976, SRR9178978, SRR9178979, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991 chr13 70798263 70798264 + Annotated LINE|L2|L2a ENSMUSG00000113334.2, D030007L05Rik ENSMUST00000222964.2 chr13 7126349 7126354 - Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000114017.2, Gm40662 ENSMUST00000222263.2, ENSMUST00000222208.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697200, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9080664, SRR9080665, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178988, SRR9178991 chr13 71635713 71635745 + Annotated LTR|ERVL-MaLR|ORR1A3-int ENSMUSG00000113358.2, 1700112M02Rik ENSMUST00000221719.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 73377218 73377219 - Annotated LINE|L1|L1MA4A NR_126459.1 chr13 73495063 73495064 - Annotated LINE|L1|L1Lx_II ENSMUSG00000113346.4, Eprn ENSMUST00000246486.1 ENCFF002FAA, ENCFF067UCQ, ENCFF170XMM, ENCFF785TEQ chr13 73495180 73495181 - Predicted LINE|L1|L1Lx_II ENSMUSG00000113346.4, Eprn ENCFF002FAA, ENCFF067UCQ, ENCFF270ERO, ENCFF444YCN, ENCFF785TEQ, ENCFF939IUH, ENCFF964WZW, ENCFF319SDE, ENCFF517DCU chr13 74725945 74725946 - Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000112964.3, ENSMUSG00000113047.3, E430024I08Rik, Gm47469 ENCFF102BWR, ENCFF195JLT, ENCFF444YCN, ENCFF454ZUS, ENCFF510TTU, ENCFF587VDB, ENCFF609ZVL, ENCFF694NRG, ENCFF766LGO, ENCFF782NPY chr13 74757356 74757357 + Annotated LTR|ERVK|RLTRETN_Mm ENSMUSG00000120784.1, ENSMUSG00000120784 ENSMUST00000245789.1 ENCFF210BCB, ENCFF590NVM, ENCFF345BBC, ENCFF818BAS, SRR6904685 chr13 77262127 77262128 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000021597.17, Slf1 SRR2089639, SRR2089647, SRR2089651 chr13 77698509 77698510 + Predicted LINE|L1|L1ME1 ENSMUSG00000071252.7, 2210408I21Rik SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640 chr13 81127524 81127525 + Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000097098.9, 9330111N05Rik DRR091691, DRR091693, SRR11428468, SRR15198217, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR9178982, SRR9178985 chr13 81127589 81127590 + Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000114479.2, Gm49375 ENSMUST00000223992.2 DRR091691, DRR091693, SRR11428468, SRR15198217, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR2040601, SRR9178982, SRR9178985 chr13 84136001 84136002 - Annotated DNA|hAT-Ac|OldhAT1 ENSMUSG00000114379.3, Gm4241 ENSMUST00000244639.1 chr13 87558153 87558173 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00002075184.1, Gm55180 ENCFF013HYW, ENCFF017LOD, ENCFF027RRZ, ENCFF033ZUH, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF170XMM, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF236TUH, ENCFF251WZA, ENCFF269WEZ, ENCFF270ERO, ENCFF284AEN, ENCFF304DLW, ENCFF315OOH, ENCFF330FNX, ENCFF339MSB, ENCFF364LFJ, ENCFF390NKP, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF467LJD, ENCFF484HRX, ENCFF510LAE, ENCFF516BTG, ENCFF521NCL, ENCFF532UKS, ENCFF567AFB, ENCFF573UIH, ENCFF581KUX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF651SDJ, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF721ASG, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF826RUZ, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF933KQV, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF975NCY, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF494ZWE, ENCFF517DCU, ENCFF555BQD, ENCFF641WPY, ENCFF667KKO, ENCFF671TUD, ENCFF715CAJ, ENCFF723MAR, ENCFF827NYZ, ENCFF904RJF, ENCFF906OAF chr13 89532942 89532943 - Annotated LTR|ERVK|RLTR44B ENSMUSG00000121063.1, ENSMUSG00000121063 ENSMUST00000247040.1 ENCFF001NDZ, ENCFF001NEC chr13 91058466 91058467 - Predicted LTR|ERVL|LTR40b ENSMUSG00000078958.10, Atp6ap1l SRR11428467, SRR11428469, SRR15198220, SRR15198223, SRR15198226, SRR9178981, SRR9178986 chr13 91955992 91956116 - Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000021621.16, Zcchc9 ENCFF001RTD, ENCFF114PSQ, ENCFF121OLG, ENCFF142CUS, ENCFF163LPQ, ENCFF210BCB, ENCFF214IUN, ENCFF221JNS, ENCFF234MZC, ENCFF251TMY, ENCFF261OTH, ENCFF305IXM, ENCFF367BBB, ENCFF376MQF, ENCFF415KCJ, ENCFF449MIK, ENCFF519IZA, ENCFF528CBF, ENCFF534DID, ENCFF560YXX, ENCFF623BKO, ENCFF641QXI, ENCFF686EWL, ENCFF707QJV, ENCFF793CWJ, ENCFF849GVQ, ENCFF868XLZ, ENCFF907HVO, ENCFF924VRI, ENCFF017LOD, ENCFF033ZUH, ENCFF222GPK, ENCFF251WZA, ENCFF308FEA, ENCFF345BBC, ENCFF364LFJ, ENCFF374YTS, ENCFF533DWD, ENCFF654AEJ, ENCFF712DGP, ENCFF834VIK, ENCFF923VUD, ENCFF933KQV, ENCFF945ICZ, ENCFF012HVN, ENCFF024CUG, ENCFF027GCQ, ENCFF041PJP, ENCFF046HWP, ENCFF077CYB, ENCFF107YGR, ENCFF133KGZ, ENCFF163BDT, ENCFF172DMS, ENCFF237JCE, ENCFF247VEN, ENCFF277JGD, ENCFF278JAU, ENCFF307OHZ, ENCFF320CXH, ENCFF321NRW, ENCFF341YZB, ENCFF357QTB, ENCFF421DHQ, ENCFF422ZNC, ENCFF423GTP, ENCFF429ZEH, ENCFF437QAE, ENCFF454DOT, ENCFF482VRF, ENCFF483KXD, ENCFF487OHM, ENCFF573WSG, ENCFF578MOR, ENCFF606XHA, ENCFF609WRW, ENCFF680OWA, ENCFF691DJE, ENCFF698WQO, ENCFF711XWR, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF817HZQ, ENCFF834TQY, ENCFF867FTP, ENCFF908MGO, ENCFF949QCF, ENCFF953WBM, ENCFF958BIE, ENCFF960QTC, ENCFF976SMI, ENCFF997QQG, ENCFF014SLC, ENCFF062GNP, ENCFF119IHT, ENCFF186VNL, ENCFF302TQH, ENCFF349AIG, ENCFF361MLD, ENCFF442OKF, ENCFF454JTI, ENCFF525QIM, ENCFF555BQD, ENCFF574YMK, ENCFF582WGH, ENCFF653QJY, ENCFF667KKO, ENCFF720MPJ, DRR091698, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198225, SRR15198226, SRR15198227 chr13 91956176 91956189 - Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000021621.16, Zcchc9 ENCFF114PSQ, ENCFF121OLG, ENCFF138QRF, ENCFF142CUS, ENCFF214IUN, ENCFF221JNS, ENCFF234MZC, ENCFF367BBB, ENCFF502ANK, ENCFF560YXX, ENCFF641QXI, ENCFF686EWL, ENCFF707QJV, ENCFF793CWJ, ENCFF849GVQ, ENCFF868XLZ, ENCFF907HVO, ENCFF924VRI, ENCFF308FEA, ENCFF533DWD, ENCFF933KQV, ENCFF014CMK, ENCFF027GCQ, ENCFF070YMI, ENCFF118YHP, ENCFF133KGZ, ENCFF163BDT, ENCFF237JCE, ENCFF247VEN, ENCFF277JGD, ENCFF421DHQ, ENCFF429ZEH, ENCFF437QAE, ENCFF483KXD, ENCFF487OHM, ENCFF606XHA, ENCFF609WRW, ENCFF680OWA, ENCFF698WQO, ENCFF750IZJ, ENCFF817HZQ, ENCFF953WBM, ENCFF960QTC, ENCFF997QQG, ENCFF062GNP, ENCFF186VNL, ENCFF260KJY, ENCFF302TQH, ENCFF442OKF, ENCFF525QIM, ENCFF582WGH, ENCFF653QJY, ENCFF720MPJ, DRR091698, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198225, SRR15198226, SRR15198227 chr13 94431513 94431514 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000114055.2, Gm32089 ENSMUST00000221222.2 ENCFF102BWR, ENCFF119KNP, ENCFF140VGY, ENCFF178ZVU, ENCFF214IUN, ENCFF262URV, ENCFF326TQL, ENCFF625JLB, ENCFF808XFI, ENCFF880FYC, ENCFF937GBW, ENCFF989HJD, ENCFF133KGZ, ENCFF235HER, ENCFF279EVY, ENCFF280LCC, ENCFF490ULA, ENCFF596INO, ENCFF780UQU chr13 94431587 94431588 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000114055.2, Gm32089 ENCFF102BWR, ENCFF119KNP, ENCFF140VGY, ENCFF178ZVU, ENCFF214IUN, ENCFF262URV, ENCFF326TQL, ENCFF625JLB, ENCFF808XFI, ENCFF880FYC, ENCFF937GBW, ENCFF989HJD, ENCFF133KGZ, ENCFF235HER, ENCFF279EVY, ENCFF280LCC, ENCFF490ULA, ENCFF596INO, ENCFF780UQU chr13 95460113 95460121 + Annotated LTR|ERVL|MT2B1 ENSMUSG00000041995.9, Zbed3 ENSMUST00000221807.2, NM_001302538.1 chr13 97170840 97170912 - Annotated LTR|ERVK|RMER16-int ENSMUSG00000052075.8, 1700029F12Rik ENSMUST00000091377.5, ENSMUST00000222360.2, ENSMUST00000221277.2, NM_001080777.2, NM_025585.3, NM_001284205.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr13 97343016 97343017 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000041773.9, Enc1 SRR2089621, SRR2089622, SRR2089623, SRR2089631, SRR2089634, SRR2089642, SRR2089646 chr13 97346805 97346806 + Predicted LTR|ERVK|RMER19B ENSMUSG00000041773.9, Enc1 SRR2089620, SRR2089630, SRR2089632, SRR2089641, SRR2089642, SRR2089645 chr13 97619209 97619260 + Annotated LTR|ERVK|RLTR16B_MM ENSMUSG00000078952.11, Lncenc1 ENSMUST00000179324.2, ENSMUST00000243064.1, ENSMUST00000244070.1, ENSMUST00000244982.1, ENSMUST00000245625.1, ENSMUST00000242609.1, ENSMUST00000245212.1, ENSMUST00000242928.1, ENSMUST00000243060.1, ENSMUST00000244877.1, ENSMUST00000246094.1, NR_110431.1, NR_110430.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr13 97647712 97647737 + Annotated LTR|ERVL-MaLR|MLT1C ENSMUSG00000114926.3, Gm2379 ENSMUST00000225874.2, ENSMUST00000240910.1 ENCFF834TQY, SRR11428470, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198226, SRR2927111, SRR6904683 chr13 9884560 9884561 - Annotated LINE|L1|L1MdGf_II ENSMUSG00002075551.1, Gm55276 ENSMUST00020182858.1 chr13 99520037 99520038 + Predicted SINE|Alu|B1_Mm ENSMUSG00000041632.8, Mrps27 SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr14 100450588 100450633 + Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000054391.13, 4930517O19Rik ENSMUST00000145018.2 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr14 103726793 103726794 + Predicted LINE|L1|Lx5 ENSMUSG00000115762.2, Gm34907 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr14 103936932 103936964 + Predicted LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000055717.14, Slain1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR5643201, SRR6338004, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 106454005 106454006 + Predicted LINE|L1|L1MdF_II ENSMUSG00000022113.7, ENSMUSG00000115439.2, Trim52, Gm36107 SRR13142122, SRR13142123, SRR15198222, SRR15198223, SRR6338004 chr14 11731219 11731253 - Annotated LTR|ERVK|RMER17A2 ENSMUSG00000089833.3, Fhitos ENSMUST00000226067.2, ENSMUST00000160149.2, NR_131139.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 118603290 118603334 + Annotated LTR|ERVK|RLTR51A_Mm ENSMUSG00000099911.2, 1700044C05Rik ENSMUST00000186060.2, NR_045624.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR9080662, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 119164825 119164854 + Predicted LTR|ERVL|RMER15 ENSMUSG00000022136.9, Dnajc3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198218, SRR15198220, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178991 chr14 120543791 120543875 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000022139.18, Mbnl2 ENSMUST00000227594.2, ENSMUST00000227644.2, NM_001360376.1 ENCFF001NCP, ENCFF001NDA, ENCFF001NDD, ENCFF001RTJ, ENCFF002FAC, ENCFF091WMS, ENCFF094CCP, ENCFF125HRQ, ENCFF126HTW, ENCFF140VGY, ENCFF179WPT, ENCFF210BCB, ENCFF229AIZ, ENCFF261OTH, ENCFF297CWJ, ENCFF392TDB, ENCFF533JUU, ENCFF589MBR, ENCFF590NVM, ENCFF595GFM, ENCFF625JLB, ENCFF683RFI, ENCFF775BPV, ENCFF782JNB, ENCFF851ESH, ENCFF888HEF, ENCFF915FID, ENCFF991TPB, ENCFF993QUE, ENCFF041PJP, ENCFF065ZIE, ENCFF087IUJ, ENCFF089SWU, ENCFF090EUZ, ENCFF133KGZ, ENCFF172DMS, ENCFF186NDY, ENCFF189JVE, ENCFF197TJB, ENCFF209RRO, ENCFF280LCC, ENCFF301VMF, ENCFF319YFJ, ENCFF328TJH, ENCFF359DNK, ENCFF380BYT, ENCFF394AUR, ENCFF404HLB, ENCFF406LFV, ENCFF429TQT, ENCFF561CZI, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF593TQB, ENCFF603QSQ, ENCFF618SIR, ENCFF644GYU, ENCFF655CUI, ENCFF658NHH, ENCFF711XWR, ENCFF727JTZ, ENCFF766UJI, ENCFF780UQU, ENCFF794GVC, ENCFF809QBQ, ENCFF829HAB, ENCFF840EFC, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF863ENS, ENCFF877SON, ENCFF926IDV, ENCFF936LNA, ENCFF971DTR chr14 120874433 120874457 + Predicted DNA|hAT-Charlie|URR1B ENSMUSG00000115648.2, Gm49008 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091698, DRR091699, SRR10697199, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080666, SRR9178980, SRR9178982, SRR9178985, SRR9178989, SRR9178991, SRR9178992 chr14 122115592 122115593 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000102112.3, 1810041H14Rik ENCFF494ZWE, SRR11428470, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198226, SRR15198227 chr14 123143407 123143408 - Predicted LTR|ERVL-MaLR|MTEa ENSMUSG00000041625.16, Ggact DRR091688, SRR11428468, SRR11428469, SRR11428470, SRR9178991 chr14 123280694 123280695 + Annotated LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000115016.3, Gm33906 ENSMUST00000228377.3 chr14 13903072 13903073 + Predicted LINE|L1|L1M2 ENSMUSG00000021747.13, Cfap20dc DRR091693, DRR091695, SRR10697199, SRR10697203, SRR15198221, SRR15198222, SRR15198226, SRR2927113, SRR9178976, SRR9178977, SRR9178979, SRR9178981, SRR9178983, SRR9178986, SRR9178989, SRR9178991, SRR9178992 chr14 14102332 14102374 - Annotated LTR|ERVK|RMER17C ENSMUSG00000114532.2, 2610318M16Rik ENSMUST00000225127.2, NR_151471.1 DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR3178203, SRR3178206, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178977, SRR9178978, SRR9178983, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr14 17956458 17956459 - Predicted LTR|ERV1|RLTR14-int ENSMUSG00000079386.9, Gm3173 ENCFF001NDA, ENCFF001NDD, ENCFF065LOT, ENCFF478KOR, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220 chr14 19207603 19207607 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000079407.10, 1700110I01Rik DRR091689, DRR091696, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697200, SRR10697202, SRR10697203, SRR13142118, SRR13142123, SRR15198225, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178990, SRR9178991 chr14 20346864 20346865 + Predicted SINE|Alu|B1F ENSMUSG00000021809.11, Nudt13 SRR2089605, SRR2089616, SRR2089618, SRR2089621, SRR2089623 chr14 20357051 20357053 + Predicted SINE|B4|ID_B1 ENSMUSG00000021809.11, Nudt13 SRR2089605, SRR2089610, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641, SRR2089642, SRR2089644 chr14 21531502 21531528 + Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000021767.20, Kat6b ENSMUST00000182996.2, ENSMUST00000183201.8 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF089PFT, ENCFF489IGD, ENCFF521IDK, ENCFF696TCH chr14 22081159 22081189 + Predicted LINE|L1|L1MdA_II ENSMUSG00000063458.14, Lrmda ENCFF043JGD, ENCFF084PUC, ENCFF207OVG, ENCFF212ZXS, ENCFF218HNK, ENCFF225MMR, ENCFF344LNZ, ENCFF363CYZ, ENCFF392TDB, ENCFF422ATU, ENCFF437AJW, ENCFF443PSO, ENCFF564YPB, ENCFF743QXJ, ENCFF789LUC, ENCFF812CUD, ENCFF912RLS, ENCFF915FID, ENCFF962LFN, ENCFF970JWC, ENCFF023MKT, ENCFF195JLT, ENCFF345BBC, ENCFF455DHP, ENCFF970VKB, ENCFF078CCF, ENCFF088PZI, ENCFF149BQJ, ENCFF189BIW, ENCFF201IQS, ENCFF203EWG, ENCFF332RWQ, ENCFF371ZDG, ENCFF411YXB, ENCFF422CQE, ENCFF453MPR, ENCFF562MVN, ENCFF618PVF, ENCFF641CYW, ENCFF672WYO, ENCFF790WIY, ENCFF861RRQ, ENCFF937KFC, ENCFF944RHJ, ENCFF477YHR chr14 24427319 24427320 - Annotated LINE|L1|Lx5 ENSMUSG00000114567.2, Gm47774 ENSMUST00000224191.2 DRR091696, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR11428467, SRR11428469, SRR13142119, SRR13142120, SRR15198219, SRR15198220, SRR15198223, SRR15198228, SRR2040601, SRR2927111, SRR9178976, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178989 chr14 25913897 25913898 - Predicted SINE|Alu|PB1 ENSMUSG00000095304.10, Plac9 DRR091689, DRR091690, DRR091692, DRR091694, SRR10697202, SRR15198217, SRR15198221, SRR2040601, SRR6338004, SRR9080665, SRR9178981, SRR9178987, SRR9178988, SRR9178989 chr14 25915551 25915552 - Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000095304.10, Plac9 DRR091688, DRR091691, DRR091695, DRR091698, DRR091699, SRR10697197, SRR11428470, SRR9178981, SRR9178985 chr14 26295011 26295015 + Annotated LTR|ERVK|RMER19B ENSMUSG00000040818.11, Dennd6a ENSMUST00000224248.2, ENSMUST00000224378.2, ENSMUST00000224111.2, NM_001285466.1, NM_001285467.1 chr14 27146224 27146225 + Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000040651.10, Tasor ENCFF059IQN, ENCFF262URV, ENCFF345OIF, ENCFF865WQE, ENCFF348FTH, ENCFF374YTS, ENCFF444YCN, ENCFF654AEJ, ENCFF962OCF, ENCFF053NFR, ENCFF302KQL, ENCFF321NRW chr14 30235244 30235245 + Annotated LINE|L2|L2 ENSMUSG00000021962.10, Dcp1a ENSMUST00000223568.2 DRR091698, SRR15198223 chr14 30244557 30244558 + Predicted SINE|B2|B3 ENSMUSG00000021962.10, Dcp1a ENCFF002FAC, ENCFF005NBP, ENCFF533NLR, ENCFF117ZMM, ENCFF505YPK, ENCFF641CYW, ENCFF661TOM, ENCFF712BKP chr14 30891595 30891596 - Predicted LINE|L1|L1_Mur2 ENSMUSG00000042286.14, Stab1 ENCFF126RJS, ENCFF533NLR, ENCFF704GEB, ENCFF795DLS, ENCFF884TJE, ENCFF910ESY, ENCFF972IVS, ENCFF055PZZ, ENCFF655CUI chr14 31464785 31464819 - Annotated LINE|L1|L1ME2z ENSMUSG00000014496.9, Ankrd28 ENSMUST00000227307.2, ENSMUST00000227083.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 31869544 31869545 + Annotated LTR|ERVK|ERVB5_1-LTR_MM ENSMUSG00000021907.14, Msmb ENSMUST00000130397.2 chr14 32039941 32039942 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000115691.2, Gm48914 ENSMUST00000226980.2 ENCFF001NCP, ENCFF001NDA, ENCFF001RTF, ENCFF001RTJ, ENCFF002EZU, SRR15198223 chr14 33774621 33774665 + Annotated LTR|ERVL-MaLR|MLT1G ENSMUSG00000047441.5, Antxrl ENSMUST00000226211.2 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR3178203, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 34996687 34996688 + Predicted LTR|ERVL|RMER15 ENSMUSG00000041078.8, Grid1 SRR2089606, SRR2089609, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 34999559 34999560 + Predicted LINE|L1|L1MdTf_II ENSMUSG00000041078.8, Grid1 SRR2089606, SRR2089608, SRR2089615, SRR2089642, SRR2089645 chr14 35000937 35000938 + Predicted LINE|L1|L1MdTf_I ENSMUSG00000041078.8, Grid1 SRR2089607, SRR2089620, SRR2089623, SRR2089639 chr14 35308915 35308916 + Predicted LTR|ERVL-MaLR|ORR1G ENSMUSG00000041078.8, Grid1 SRR2089603, SRR2089611, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089637, SRR2089640, SRR2089641, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 3572945 3572987 + Predicted LTR|ERVK|RLTR10C ENSMUSG00000058317.13, Ube2e2 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9178976, SRR9178978, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986 chr14 37193120 37193182 - Predicted LTR|ERVK|IAPLTR3 ENSMUSG00000114741.2, Gm47971 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178987, SRR9178988, SRR9178989 chr14 38942028 38942081 + Predicted LTR|ERVL-MaLR|MTB_Mm ENSMUSG00000093383.2, Gm20642 ENSMUST00000177185.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR5643199, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 39140798 39140807 - Predicted LINE|L1|L1MdF_V ENSMUSG00000041014.18, Nrg3 ENCFF002EZU, ENCFF002FAE, ENCFF065TCZ, ENCFF247QZW, ENCFF308FEA, ENCFF335ZSA, ENCFF374YTS, ENCFF408NBX, ENCFF454ZUS, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF657FNE, ENCFF721BNO, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF831ISX, ENCFF860XMD, ENCFF962OCF, ENCFF008XVO, ENCFF075EMK, ENCFF499CDP, ENCFF510IAG, ENCFF670VVN, ENCFF749STK, ENCFF847LGC, ENCFF932SOZ, ENCFF970VKL chr14 39377010 39377011 + Predicted LTR|ERV1|RLTR48A ENSMUSG00000101261.2, 1700109I08Rik DRR091692, DRR091698, DRR091699, SRR10697200, SRR10697203, SRR15198217, SRR15198224, SRR15198226, SRR9178977, SRR9178979, SRR9178987, SRR9178991 chr14 39377597 39377621 + Annotated LTR|ERVK|RMER17B2 ENSMUSG00000101261.2, 1700109I08Rik ENSMUST00000185680.2, NR_045936.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080665, SRR9178976, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990 chr14 40775426 40775427 + Predicted LTR|ERVK|IAPEY4_LTR ENSMUSG00000114196.2, Gm47547 ENCFF115LWP, ENCFF573UIH, ENCFF657UWH, ENCFF804UQS, ENCFF868WEJ, ENCFF962FIU, ENCFF199IWW, ENCFF423TSB, DRR091689, SRR2040601 chr14 40813226 40813227 + Predicted LTR|ERVK|RMER13A ENSMUSG00000021790.13, Dydc1 SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6904685 chr14 4447787 4447796 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000114504.2, Gm48321 ENSMUST00000224512.2, ENSMUST00000225876.2 chr14 45109617 45109618 + Predicted LTR|ERVK|RLTR13B4 ENSMUSG00000121411.1, ENSMUSG00000121411 SRR2089603, SRR2089617, SRR2089618, SRR2089635, SRR2089636, SRR2089638, SRR2089640, SRR2089650 chr14 45244356 45244357 - Annotated SINE|Alu|PB1D10 ENSMUSG00000090709.3, Gm17173 ENSMUST00000168000.2 chr14 45411043 45411044 - Predicted LTR|ERVK|RMER17D ENSMUSG00000021830.15, Txndc16 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091696, DRR091698, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR11428467, SRR11428469, SRR13142119, SRR13142120, SRR15198221, SRR15198225, SRR15198226, SRR2927113, SRR9178982, SRR9178983, SRR9178984, SRR9178989, SRR9178990, SRR9178992 chr14 45682445 45682446 - Annotated LTR|ERVK|RMER17C2 ENSMUSG00000115209.2, Gm34250 ENSMUST00000228291.2 DRR091694, SRR2040601 chr14 45781121 45781168 + Annotated LINE|L2|L2a ENSMUSG00000115324.2, 4930527F14Rik ENSMUST00000226815.2, ENSMUST00000227827.2, NR_045809.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080665, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr14 45801291 45801292 + Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000085913.3, Gm15601 ENSMUST00000226558.2 chr14 45869838 45869839 - Predicted LINE|L1|L1Lx_I ENSMUSG00000037697.20, Ddhd1 ENCFF979WZO, ENCFF994BOT, ENCFF047LTH, ENCFF166UTY, ENCFF272WGJ chr14 46321482 46321540 + Annotated LINE|L1|L1MdF_V ENSMUSG00000044285.10, Ubb-ps ENSMUST00000244431.1, ENSMUST00000227415.2, NR_002875.3 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048FGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF075MGH, ENCFF076CCZ, ENCFF083BIG, ENCFF084DCW, ENCFF084PUC, ENCFF086ZMV, ENCFF089PFT, ENCFF089WMB, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF106GQS, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF143PHU, ENCFF147GLI, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF168WHQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF198RBJ, ENCFF205GJI, ENCFF206EGD, ENCFF207DLW, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF221NAP, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF264RIV, ENCFF269UZL, ENCFF273CJD, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF289WHW, ENCFF295SYY, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF319INV, ENCFF321BMO, ENCFF326TQL, ENCFF327MSM, ENCFF331WKS, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF351JWR, ENCFF352VWM, ENCFF358UFZ, ENCFF363CYZ, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF400XLQ, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF422ATU, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF452AXW, ENCFF453XOG, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489IGD, ENCFF489VZI, ENCFF491XRO, ENCFF495SQR, ENCFF495YGN, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521IDK, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF544BEF, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF564OKH, ENCFF564YPB, ENCFF570GTP, ENCFF570KYE, ENCFF575RUC, ENCFF585YYC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF621PKT, ENCFF622NXP, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF643VPC, ENCFF654BXL, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF696TCH, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764TGO, ENCFF764ZUI, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793IYH, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF836JVX, ENCFF841OXD, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF865WQE, ENCFF868XLZ, ENCFF874ELO, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF883UYA, ENCFF884TJE, ENCFF885AJK, ENCFF886XAI, ENCFF888HEF, ENCFF888LGA, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF907HVO, ENCFF910ESY, ENCFF912RLS, ENCFF914BRK, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970JWC, ENCFF972IVS, ENCFF979WZO, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF233IFH, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF019PWU, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF027GCQ, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF061WTN, ENCFF065ZIE, ENCFF066MTU, ENCFF067OYG, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF077YZF, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF095NMU, ENCFF098AYQ, ENCFF103SQR, ENCFF106GHS, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF117ZMM, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF127DCC, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF134VWD, ENCFF136DUH, ENCFF136TYP, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163BDT, ENCFF163DKN, ENCFF167GWU, ENCFF170KWW, ENCFF172DMS, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF186NDY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF194DAO, ENCFF197OUM, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF208BJY, ENCFF209RRO, ENCFF210BVU, ENCFF221ZQB, ENCFF222MKT, ENCFF228CMT, ENCFF229TCX, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF243LBQ, ENCFF243TPB, ENCFF249LSC, ENCFF255ESE, ENCFF258WLS, ENCFF260UQJ, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF301VMF, ENCFF302KQL, ENCFF302MXO, ENCFF303BIV, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF311MZV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF319YFJ, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF332IRR, ENCFF332RWQ, ENCFF334XFS, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF347EUO, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF369VAI, ENCFF371ZDG, ENCFF374VAZ, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF383AJS, ENCFF387BVS, ENCFF389ZWR, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399YLV, ENCFF406LFV, ENCFF406NLL, ENCFF407JTK, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF411YXB, ENCFF414IHO, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422CQE, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF440IAL, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF464KYQ, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF486BJT, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF512XKX, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF519AKK, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF530DUT, ENCFF536ZVF, ENCFF538AIM, ENCFF538TFM, ENCFF541HSQ, ENCFF543GNI, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF552LXG, ENCFF558UDY, ENCFF561CZI, ENCFF563FUC, ENCFF565CON, ENCFF565YJQ, ENCFF566HCI, ENCFF569ELL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF580KHN, ENCFF581RIR, ENCFF584OOK, ENCFF591WVP, ENCFF593TQB, ENCFF594GIP, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF656DRS, ENCFF661TOM, ENCFF661UPO, ENCFF663TDQ, ENCFF667RGF, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF678CRA, ENCFF680WIN, ENCFF685GDB, ENCFF689RQK, ENCFF689UNV, ENCFF689ZLL, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF753HNF, ENCFF756QJD, ENCFF758BKM, ENCFF759WDO, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF779MMO, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF782CNW, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791ZDR, ENCFF796TQV, ENCFF801SNQ, ENCFF804EWD, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF817HZQ, ENCFF818ZJQ, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF830CBI, ENCFF832FTK, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF843WRN, ENCFF847HFJ, ENCFF847IGW, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF855UFX, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF894SHM, ENCFF898CAY, ENCFF900AIQ, ENCFF901KUE, ENCFF903KDM, ENCFF906CJJ, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF932XKS, ENCFF934VFW, ENCFF935ZEM, ENCFF936LNA, ENCFF937KFC, ENCFF938XTE, ENCFF946LMX, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951PCM, ENCFF952EQQ, ENCFF952FJN, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF964DLW, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF974KKD, ENCFF983GRF, ENCFF986DZE, ENCFF994PPZ, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF008XVO, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF667KKO, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643200, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 46458549 46458584 + Annotated LTR|ERVL-MaLR|MLT1A1 ENSMUSG00000120332.1, ENSMUSG00000120332 ENSMUST00000242583.1, ENSMUST00000242588.1, ENSMUST00000244888.1, ENSMUST00000244509.1 chr14 46753895 46753912 - Annotated DNA|hAT-Charlie|MER5A ENSMUSG00000115158.2, Gm48912 ENSMUST00000227980.2 SRR10697199, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR15198219, SRR15198221, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927112, SRR2927113, SRR9080663, SRR9178976, SRR9178980, SRR9178982, SRR9178985, SRR9178990 chr14 48231249 48231260 - Annotated LTR|ERVK|RMER17B2 ENSMUSG00000115403.2, Gm49304 ENSMUST00000227382.2 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697200, SRR11428467, SRR15198217, SRR15198218, SRR15198219, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9178980, SRR9178982, SRR9178985, SRR9178989 chr14 48517476 48517477 + Predicted LTR|ERVL-MaLR|MTE-int ENSMUSG00000021846.11, Peli2 SRR3178203, SRR3178204, SRR3178205 chr14 49360158 49360169 - Annotated SINE|Alu|B1F ENSMUSG00000115737.2, Rpl19-ps3 ENSMUST00000227409.2, ENSMUST00000226439.2 chr14 49825955 49825956 - Predicted LINE|L1|L1MD1 ENSMUSG00002075370.1, Gm54822 SRR2089637, SRR2089639, SRR2089640 chr14 50298817 50298818 + Annotated LTR|ERVK|RLTR46A2 ENSMUSG00000102189.2, Gm37194 ENSMUST00000193092.2 chr14 50593845 50593848 + Predicted LINE|L1|L1MdFanc_II ENSMUSG00000051969.8, Tlr11 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 50756522 50756523 + Predicted SINE|B4|ID_B1 ENSMUSG00000068431.4, Or11g26 SRR11428468, SRR6904684, SRR9178985 chr14 51108099 51108100 - Predicted SINE|B4|ID_B1 ENSMUSG00000006281.9, Tep1 ENCFF023RRS, ENCFF056GXQ, ENCFF064PBF, ENCFF076CCZ, ENCFF082HKQ, ENCFF083BIG, ENCFF083CUR, ENCFF086ZMV, ENCFF092YWY, ENCFF105KSL, ENCFF106RGV, ENCFF114PSQ, ENCFF120DEX, ENCFF126RJS, ENCFF133PEB, ENCFF136POG, ENCFF138TOM, ENCFF147GLI, ENCFF151QHP, ENCFF160HKC, ENCFF168WHQ, ENCFF192NVI, ENCFF196PBF, ENCFF198NQV, ENCFF206EGD, ENCFF212JFB, ENCFF234MZC, ENCFF262WAE, ENCFF273CJD, ENCFF277XPM, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF304MIZ, ENCFF307VAF, ENCFF312CZB, ENCFF313ERY, ENCFF322VJD, ENCFF330IYN, ENCFF330LWU, ENCFF348VIH, ENCFF349LIW, ENCFF358UFZ, ENCFF366BBB, ENCFF367BBB, ENCFF393UZV, ENCFF403ORF, ENCFF421ACV, ENCFF422ATU, ENCFF426QFT, ENCFF432ZLQ, ENCFF439OFV, ENCFF443PSO, ENCFF453XOG, ENCFF460NGS, ENCFF472YPG, ENCFF489VZI, ENCFF491XRO, ENCFF495SQR, ENCFF521UGJ, ENCFF522VLI, ENCFF525POD, ENCFF533NLR, ENCFF535YBP, ENCFF552DRF, ENCFF560YXX, ENCFF565YHF, ENCFF581WWO, ENCFF589MBR, ENCFF606EDP, ENCFF622NXP, ENCFF639RWJ, ENCFF645QUX, ENCFF647ICR, ENCFF667FDW, ENCFF686EWL, ENCFF705JRV, ENCFF707QJV, ENCFF743RQJ, ENCFF755IDE, ENCFF764EJV, ENCFF764TGO, ENCFF771YNG, ENCFF780TUN, ENCFF787LWL, ENCFF793CWJ, ENCFF794FBC, ENCFF823PZU, ENCFF844KCR, ENCFF844QDN, ENCFF858CRT, ENCFF858CTQ, ENCFF868XLZ, ENCFF876MJS, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF896MQK, ENCFF902GVX, ENCFF906FNQ, ENCFF910ESY, ENCFF913CFN, ENCFF914BRK, ENCFF917RNE, ENCFF925ONP, ENCFF931DDH, ENCFF934ULS, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970JWC, ENCFF970XZM, ENCFF982BLT, ENCFF994BOT, ENCFF023MKT, ENCFF195JLT, ENCFF712DGP, ENCFF945ICZ, ENCFF002ZAX, ENCFF003GJV, ENCFF008YSM, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF016CHX, ENCFF019PVP, ENCFF022ACG, ENCFF024CUG, ENCFF030IFE, ENCFF035BBA, ENCFF037LEJ, ENCFF039DES, ENCFF043DTH, ENCFF045YRV, ENCFF049WBL, ENCFF055PZZ, ENCFF057MDU, ENCFF064VAD, ENCFF065UBR, ENCFF066UDR, ENCFF077CYB, ENCFF077YZF, ENCFF080BTV, ENCFF080DNG, ENCFF087XKQ, ENCFF088PZI, ENCFF089SWU, ENCFF090EUZ, ENCFF098AYQ, ENCFF106GHS, ENCFF106RLX, ENCFF108JLQ, ENCFF111MWQ, ENCFF116DGU, ENCFF117ZMM, ENCFF118PQI, ENCFF124SSE, ENCFF127DCC, ENCFF127KHN, ENCFF133PKQ, ENCFF134PXJ, ENCFF136DUH, ENCFF137OYQ, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF163BDT, ENCFF163GEC, ENCFF167EHX, ENCFF167GWU, ENCFF175LCC, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF198XFF, ENCFF208BJY, ENCFF209LBA, ENCFF219PCN, ENCFF220GKL, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF233RGQ, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF242MZE, ENCFF247VEN, ENCFF249LSC, ENCFF256UWN, ENCFF257EYD, ENCFF261EQP, ENCFF272WGJ, ENCFF276OPJ, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF296ITI, ENCFF297PPT, ENCFF301VMF, ENCFF306FQJ, ENCFF307OHZ, ENCFF310HAL, ENCFF310WDZ, ENCFF319YFJ, ENCFF324ITL, ENCFF331YYO, ENCFF335UNU, ENCFF343MZH, ENCFF347EUO, ENCFF350KYC, ENCFF350PHR, ENCFF353SEU, ENCFF358UHV, ENCFF363PDR, ENCFF370VOV, ENCFF374VAZ, ENCFF377OQI, ENCFF378TYU, ENCFF382VCK, ENCFF386HCR, ENCFF386XTQ, ENCFF394AUR, ENCFF397ZQU, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF411YXB, ENCFF417INY, ENCFF420RGI, ENCFF422CQE, ENCFF422ZNC, ENCFF423GTP, ENCFF433QNW, ENCFF437ZSM, ENCFF439BEV, ENCFF439HXQ, ENCFF456GLS, ENCFF460FON, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF468RDR, ENCFF470RDW, ENCFF477MBL, ENCFF478MHH, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF497GLK, ENCFF498OHV, ENCFF504PGI, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF513BRJ, ENCFF516QKR, ENCFF517BAY, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF527XBQ, ENCFF529LEZ, ENCFF531JWM, ENCFF538ZTW, ENCFF543GNI, ENCFF548HOL, ENCFF549IDH, ENCFF549KAB, ENCFF552LXG, ENCFF557JPW, ENCFF559QXN, ENCFF565CON, ENCFF572SQL, ENCFF573WSG, ENCFF578YPJ, ENCFF580KHN, ENCFF581ZWM, ENCFF584ZUK, ENCFF595NMM, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598PMW, ENCFF601JTS, ENCFF611QZE, ENCFF612KDP, ENCFF613SEJ, ENCFF613YNK, ENCFF618PVF, ENCFF620FXM, ENCFF635XED, ENCFF640RWH, ENCFF646GBS, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF658NHH, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF673BPE, ENCFF673SLO, ENCFF678CRA, ENCFF680OWA, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF696TTO, ENCFF696XZL, ENCFF706BUS, ENCFF711OYQ, ENCFF711XWR, ENCFF724VJN, ENCFF726YTS, ENCFF735BVR, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF750IZJ, ENCFF754VQW, ENCFF755REI, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF759HJA, ENCFF759WDO, ENCFF765AQX, ENCFF770WIT, ENCFF775OZV, ENCFF781MKK, ENCFF781XUM, ENCFF786BUI, ENCFF789AOM, ENCFF794GVC, ENCFF794MMU, ENCFF806MTS, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817NCH, ENCFF818ZJQ, ENCFF820JMO, ENCFF821HAZ, ENCFF832FTK, ENCFF840DKD, ENCFF840EFC, ENCFF845NUY, ENCFF847IGW, ENCFF848UMJ, ENCFF853PNO, ENCFF854LJN, ENCFF856UMI, ENCFF858OFI, ENCFF863ENS, ENCFF869MFM, ENCFF875BUD, ENCFF881DTW, ENCFF883APB, ENCFF885ZAO, ENCFF896XAZ, ENCFF899EJT, ENCFF903KDM, ENCFF903ULI, ENCFF904KCQ, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF936DQW, ENCFF938CNS, ENCFF939QLN, ENCFF946LMX, ENCFF948YKH, ENCFF950FFF, ENCFF951GZB, ENCFF952FJN, ENCFF953FGT, ENCFF956RCJ, ENCFF958FDX, ENCFF970PLY, ENCFF974KKD, ENCFF974XWJ, ENCFF984QED, ENCFF986DZE, ENCFF994JUO, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF062GNP, ENCFF260KJY, ENCFF477YHR, ENCFF854IBU, SRR6338004 chr14 51176548 51176549 - Annotated LTR|ERVK|RLTR12B ENSMUSG00000120879.1, ENSMUSG00000120879 ENSMUST00000246259.1 ENCFF001NCR, ENCFF828WIK chr14 51985429 51985430 + Predicted LINE|L1|L1Lx_II ENSMUSG00000091189.2, Ear-ps3 DRR091689, DRR091698, SRR15198217, SRR15198220, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR2927111, SRR2927112, SRR2927113, SRR9178978, SRR9178983, SRR9178984, SRR9178987, SRR9178990, SRR9178991 chr14 51989597 51989627 + Predicted LTR|ERVK|RLTR10-int ENSMUSG00000091189.2, Ear-ps3 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 51998495 51998496 + Predicted LINE|L1|L1MdGf_II ENSMUSG00000091189.2, Ear-ps3 SRR2089603, SRR2089605, SRR2089606, SRR2089616, SRR2089617, SRR2089620, SRR2089621, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 52252368 52252369 - Annotated LINE|CR1|Plat_L3 ENSMUSG00000049295.18, Zfp219 ENSMUST00000228051.2 ENCFF002EZY, ENCFF002FAC, ENCFF796NHQ, ENCFF027RRZ, ENCFF065LOT, ENCFF115LWP, ENCFF173IVH, ENCFF199IRM, ENCFF269SRJ, ENCFF269WEZ, ENCFF339MSB, ENCFF390NKP, ENCFF394BDJ, ENCFF446FOZ, ENCFF533DWD, ENCFF581KUX, ENCFF733MXU, ENCFF756QCA, ENCFF775SSI, ENCFF854KNE, ENCFF939IUH, ENCFF964WZW, ENCFF119IHT, ENCFF199IWW, ENCFF481CFU, ENCFF626KIV, ENCFF723MAR, ENCFF728WJB, ENCFF847LGC, ENCFF932SOZ, SRR9178991 chr14 52679511 52679512 + Predicted LINE|L1|Lx8b ENSMUSG00000035626.5, Or4e2 SRR11428467, SRR13142118, SRR13142121, SRR13142122, SRR13142123, SRR15198224, SRR15198228, SRR9080666 chr14 54173872 54173873 - Predicted LINE|L1|L1MdTf_III ENSMUSG00000105963.3, Gm43647 ENCFF696TCH, ENCFF065LOT, ENCFF270ERO, ENCFF271OHB, ENCFF308FEA, ENCFF355AMN, ENCFF377UGQ, ENCFF444YCN, ENCFF454ZUS, ENCFF533DWD, ENCFF632LPV, ENCFF686KMX, ENCFF694NRG, ENCFF733MXU, ENCFF756QCA, ENCFF775SSI, ENCFF831ISX, ENCFF912MUD, ENCFF923VUD, ENCFF939IUH, ENCFF962FIU, ENCFF964WZW, ENCFF160TQC, ENCFF344OJQ, ENCFF361MLD, ENCFF442OKF, ENCFF446LMP, ENCFF494ZWE, ENCFF517DCU, ENCFF525QIM, ENCFF582WGH, ENCFF803OIY, ENCFF827NYZ, ENCFF970VKL chr14 54535372 54535381 - Predicted LTR|ERV1|RLTR4_Mm ENSMUSG00000105703.3, Gm43305 ENCFF002DNB, ENCFF002DND, ENCFF002ERW, ENCFF102BWR, ENCFF437AJW, ENCFF450WAV, ENCFF575RUC, ENCFF993QUE, ENCFF005GQR, ENCFF017LOD, ENCFF023MKT, ENCFF269WEZ, ENCFF270ERO, ENCFF274ESJ, ENCFF284AEN, ENCFF345BBC, ENCFF364LFJ, ENCFF448TTG, ENCFF510LAE, ENCFF510TTU, ENCFF609ZVL, ENCFF636NES, ENCFF697AST, ENCFF725ATS, ENCFF728TXU, ENCFF747XPP, ENCFF854MWX, ENCFF914YDJ, ENCFF933KQV, ENCFF970VKB, ENCFF062GNP, ENCFF075EMK, ENCFF242SVY, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF442OKF, ENCFF574YMK, SRR10697203, SRR11428469, SRR11428470, SRR15198218, SRR15198222, SRR15198226, SRR2927111, SRR2927113 chr14 54792072 54792073 - Annotated SINE|Alu|PB1D9 ENSMUSG00000022177.10, Haus4 ENSMUST00000228043.2 ENCFF345OIF, ENCFF359GCY chr14 54859736 54859737 - Predicted LTR|ERVK|RMER6BA ENSMUSG00000022185.20, Acin1 SRR2089617, SRR2089632, SRR2089633, SRR2089634, SRR2089643, SRR2089650 chr14 55129957 55129958 + Annotated SINE|Alu|B1_Mur1 ENSMUSG00000022194.16, Pabpn1 ENSMUST00000140691.8 ENCFF030IFE chr14 55231147 55231148 - Annotated SINE|MIR|MIRb ENSMUSG00000053093.17, Myh7 ENSMUST00000228837.2 ENCFF002FAA, ENCFF002FAC, ENCFF027RRZ, ENCFF052WUB, ENCFF245ZOR, ENCFF261ZZF, ENCFF369YLA, ENCFF429BQZ, ENCFF516BTG, ENCFF590LNP, ENCFF642YTY, ENCFF643XFK, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF768ZCF, ENCFF782NPY, ENCFF803VZZ, ENCFF829RHM, ENCFF964WZW, ENCFF978EQI, ENCFF254YNR, ENCFF277QHC, ENCFF306ADU, ENCFF361MLD, ENCFF569XGG, ENCFF626KIV, ENCFF641WPY, ENCFF705HQV, ENCFF716YKR, ENCFF728WJB, ENCFF782WDV, ENCFF783KGQ chr14 55827605 55827606 - Annotated SINE|MIR|MIR3 ENSMUSG00000079197.11, Psme2 ENSMUST00000161027.8 ENCFF002EZU, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF089WMB, ENCFF106GQS, ENCFF327MSM, ENCFF570KYE, ENCFF575RUC, ENCFF888LGA, SRR5643199 chr14 55844846 55844847 + Predicted SINE|MIR|MIR3 ENSMUSG00000002325.16, Irf9 ENCFF023RRS, ENCFF040EEJ, ENCFF264RIV, ENCFF287KDR, ENCFF787LWL, ENCFF931HCN, ENCFF403CRC, ENCFF486BJT, ENCFF504PGI, ENCFF637GVH, ENCFF696XZL, ENCFF894COY, ENCFF996AOW chr14 55881472 55881474 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000002319.17, ENSMUSG00000002320.16, Ipo4, Tm9sf1 ENCFF344ILW, ENCFF363CYZ, ENCFF005GQR, ENCFF296VFB, ENCFF408NBX, ENCFF647TTU, ENCFF670FEL, ENCFF694NRG, ENCFF747XPP, ENCFF803VZZ, ENCFF933KQV, ENCFF087IUJ, ENCFF124SSE, ENCFF280LCC, ENCFF338LFG, ENCFF591WVP, ENCFF598WAL, ENCFF655CUI, ENCFF747VYT, ENCFF749XRU, ENCFF248ELC, ENCFF361MLD, ENCFF446LMP, ENCFF454JTI, ENCFF499CDP, ENCFF517DCU, ENCFF728WJB, DRR091697 chr14 55959840 55959841 - Predicted LTR|ERVL|RLTR28 ENSMUSG00000040472.16, Rabggta ENCFF001NCP, ENCFF001NDA, ENCFF001NDZ, ENCFF001RTD, ENCFF001RTN, ENCFF002FAE, ENCFF022FSI, ENCFF027IIP, ENCFF064PBF, ENCFF091WMS, ENCFF140VGY, ENCFF178ZVU, ENCFF179WPT, ENCFF192NVI, ENCFF225MMR, ENCFF264DCN, ENCFF319INV, ENCFF326TQL, ENCFF421SNO, ENCFF495YGN, ENCFF504ULZ, ENCFF527VIY, ENCFF560YXX, ENCFF564OKH, ENCFF605IFN, ENCFF623BKO, ENCFF670CXH, ENCFF705JRV, ENCFF808XFI, ENCFF813ZJI, ENCFF841OXD, ENCFF881TID, ENCFF989HJD, ENCFF234LUQ, ENCFF532UKS, ENCFF057FFG, ENCFF089SWU, ENCFF116QKZ, ENCFF118YHP, ENCFF148BPZ, ENCFF235HER, ENCFF268ZHE, ENCFF286GUQ, ENCFF308WGP, ENCFF332IRR, ENCFF352KGC, ENCFF429ZEH, ENCFF478BEL, ENCFF490ULA, ENCFF524FJG, ENCFF536ZVF, ENCFF591WVP, ENCFF598WAL, ENCFF705CES, ENCFF716NXU, ENCFF869DVY, ENCFF916BSM, ENCFF953FGT, ENCFF349AIG, ENCFF720MPJ, SRR3178206, SRR5643191 chr14 59283577 59283578 + Predicted SINE|B2|B3A ENSMUSG00000114720.2, Gm41162 DRR091689, DRR091692, DRR091696, DRR091699, SRR15198217, SRR15198222, SRR15198227, SRR15198228, SRR2040601, SRR9178978, SRR9178983, SRR9178986, SRR9178988, SRR9178991 chr14 59829984 59829985 - Predicted LINE|CR1|X8_LINE ENSMUSG00000021982.15, Cdadc1 ENCFF002DND, ENCFF106GQS, ENCFF334XFS, ENCFF661TOM chr14 61727452 61727453 + Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000115656.2, 4930556J02Rik SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089651 chr14 63395285 63395286 - Predicted SINE|Alu|B1_Mur2 ENSMUSG00000021273.12, ENSMUSG00000021944.16, Fdft1, Gata4 SRR2089605, SRR2089606, SRR2089607, SRR2089621, SRR2089622, SRR2089623, SRR2089630, SRR2089631, SRR2089634, SRR2089635, SRR2089639, SRR2089643, SRR2089647, SRR2089651 chr14 64323729 64323730 + Annotated DNA|hAT-Charlie|RCHARR1 NM_001347631.1 DRR091693, SRR13142123, SRR15198220, SRR15198228 chr14 65414127 65414131 - Predicted LTR|ERVL-MaLR|MTEb ENSMUSG00000114658.2, Gm30008 DRR091688, DRR091690, DRR091691, DRR091692, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697200, SRR11428469, SRR15198221, SRR15198223, SRR15198224, SRR2040601, SRR9080664, SRR9178979, SRR9178980, SRR9178983, SRR9178987, SRR9178989, SRR9178990, SRR9178992 chr14 65721776 65721777 + Predicted LTR|ERVL-MaLR|ORR1C1 ENSMUSG00000034522.11, Zfp395 SRR2089647, SRR2089650, SRR2089651 chr14 66349834 66349835 - Annotated LTR|ERV1|RLTR48A ENSMUSG00000022040.9, Ephx2 ENSMUST00000224698.2, NM_001271403.1 ENCFF489IGD, ENCFF874ELO chr14 66479919 66479945 - Predicted LTR|Gypsy|LTR88c ENSMUSG00000059456.14, Ptk2b ENCFF040EEJ, ENCFF075MGH, ENCFF092YWY, ENCFF114PSQ, ENCFF130KZZ, ENCFF133PEB, ENCFF147GLI, ENCFF196PBF, ENCFF379JPQ, ENCFF385MVU, ENCFF415KCJ, ENCFF491XRO, ENCFF494YXM, ENCFF552NWL, ENCFF667FDW, ENCFF686EWL, ENCFF698LQF, ENCFF727WWV, ENCFF745HSV, ENCFF849GVQ, ENCFF881TID, ENCFF881UBL, ENCFF907HVO, ENCFF924VRI, ENCFF003GJV, ENCFF006JHA, ENCFF012KPC, ENCFF019PWU, ENCFF022ACG, ENCFF024CUG, ENCFF028XDY, ENCFF030IFE, ENCFF039DES, ENCFF045YRV, ENCFF047LTH, ENCFF054EOL, ENCFF068CQU, ENCFF107YGR, ENCFF124SSE, ENCFF133PKQ, ENCFF136TYP, ENCFF141YUD, ENCFF143RTP, ENCFF149BQJ, ENCFF177LXI, ENCFF194DAO, ENCFF203EWG, ENCFF209RRO, ENCFF210BVU, ENCFF228CMT, ENCFF239RQP, ENCFF242MZE, ENCFF249LSC, ENCFF254TFB, ENCFF260UQJ, ENCFF261EQP, ENCFF275TCB, ENCFF296ITI, ENCFF297PPT, ENCFF307OHZ, ENCFF308WGP, ENCFF315HBU, ENCFF376PQU, ENCFF404HLB, ENCFF417INY, ENCFF420REU, ENCFF420RGI, ENCFF422ZNC, ENCFF439HXQ, ENCFF486BJT, ENCFF505YPK, ENCFF513BRJ, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF531JWM, ENCFF537DSI, ENCFF558UDY, ENCFF561CZI, ENCFF565CON, ENCFF572SQL, ENCFF578MOR, ENCFF584ZUK, ENCFF611QZE, ENCFF635XED, ENCFF651HEM, ENCFF673BPE, ENCFF685GDB, ENCFF696VQM, ENCFF700IPC, ENCFF711XWR, ENCFF794MMU, ENCFF806MTS, ENCFF814TTQ, ENCFF817HZQ, ENCFF817NCH, ENCFF820JMO, ENCFF840DKD, ENCFF843WRN, ENCFF847IGW, ENCFF896XAZ, ENCFF899EJT, ENCFF908MGO, ENCFF917KUH, ENCFF926IDV, ENCFF936DQW, ENCFF938CNS, ENCFF953FGT, ENCFF958FDX, ENCFF962ZCT, ENCFF974XWJ chr14 66922667 66922668 + Predicted SINE|B4|ID_B1 ENSMUSG00000045875.14, Adra1a SRR2089638, SRR2089647, SRR2089650 chr14 67122257 67122258 + Predicted LINE|L1|L1MdGf_II ENSMUSG00000045875.14, Adra1a SRR2089636, SRR2089637, SRR2089647, SRR2089649, SRR2089651 chr14 67140199 67140230 + Predicted LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000046204.15, Pnma2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 72714501 72714502 - Predicted LINE|L1|Lx6 ENSMUSG00000109446.2, Gm9195 SRR2089635, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 73071627 73071629 + Predicted LTR|ERVL|RMER15 ENSMUSG00000115532.2, Gm41206 SRR2089635, SRR2089636, SRR2089637, SRR2089639, SRR2089640, SRR2089647 chr14 73099668 73099669 + Predicted LTR|ERV1|RMER21A ENSMUSG00000115532.2, Gm41206 SRR2089620, SRR2089623, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089635, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 7359445 7359446 + Predicted LINE|L1|Lx9 ENSMUSG00000114770.2, 4921522A10Rik DRR091693, SRR10697200, SRR2927111, SRR2927112, SRR2927113, SRR9178979, SRR9178980, SRR9178985, SRR9178986, SRR9178989 chr14 75427769 75427770 + Annotated LINE|CR1|Plat_L3 ENSMUSG00000021998.17, Lcp1 ENSMUST00000131802.2 chr14 75863720 75863721 + Predicted SINE|B4|RSINE1 ENSMUSG00000022002.3, Erich6b SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr14 76753383 76753427 + Annotated LTR|ERVL-MaLR|ORR1C1 ENSMUSG00000115092.3, E130202H07Rik ENSMUST00000244523.1, ENSMUST00000243818.1, ENSMUST00000242896.1, ENSMUST00000244462.1, ENSMUST00000243319.1, ENSMUST00000242969.1, ENSMUST00000244926.1, ENSMUST00000244524.1, ENSMUST00000242449.1, ENSMUST00000245068.1, ENSMUST00000246417.1, ENSMUST00000241770.1, ENSMUST00000243450.1, ENSMUST00000241787.1, ENSMUST00000245340.1, ENSMUST00000242226.1, ENSMUST00000243768.1, ENSMUST00000245207.1, ENSMUST00000243516.1, ENSMUST00000244618.1 ENCFF001NDA, SRR11428468 chr14 78018455 78018456 + Predicted LTR|ERVK|RLTR10C ENSMUSG00000115257.2, Gm30467 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080666, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178988, SRR9178991 chr14 78257163 78257192 + Annotated LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000115517.2, Gm48954 ENSMUST00000226503.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904685, SRR9080662, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178992 chr14 78881880 78881903 - Annotated LINE|CR1|L3 ENSMUSG00000034731.12, Dgkh ENSMUST00000227537.2, NR_104044.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178205, SRR5643190, SRR5643191, SRR5643199, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 78940977 78941009 + Predicted SINE|B2|B3 ENSMUSG00000115107.2, Gm18368 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697200, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 79436629 79436630 - Annotated LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000115111.2, Gm4632 ENSMUST00000228380.2, NR_152203.1 chr14 79484806 79484809 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000071262.11, Zfp957 ENSMUST00000161649.9, ENSMUST00000162937.2, NM_001033215.3 chr14 79939874 79939907 + Predicted DNA|TcMar-Tigger|Tigger19b ENSMUSG00000115422.2, 4930452G13Rik DRR091688, DRR091691, DRR091694, DRR091695, DRR091696, SRR10697195, SRR10697197, SRR10697198, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR2040601, SRR9080662, SRR9080663, SRR9080665, SRR9178977, SRR9178978, SRR9178979, SRR9178983, SRR9178984, SRR9178987, SRR9178988, SRR9178989, SRR9178991 chr14 79979760 79979762 + Predicted Retroposon|L1-dep|RMER1A ENSMUSG00000102774.2, ENSMUSG00000115422.2, Gm9748, 4930452G13Rik DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697198, SRR10697202, SRR10697203, SRR11428469, SRR13142118, SRR13142119, SRR2040601, SRR2927113, SRR9178985 chr14 84312726 84312762 - Predicted LTR|ERVK|RLTR10B ENSMUSG00000115043.2, Gm32455 ENSMUST00000228897.2, NR_153783.1 DRR091688, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697203, SRR11428467, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080665, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178987, SRR9178988, SRR9178989, SRR9178991 chr14 86410363 86410436 + Annotated LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000115217.2, Gm32729 ENSMUST00000227116.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 87652568 87652569 + Predicted SINE|B2|B2_Mm1t ENSMUSG00000022019.17, Tdrd3 ENCFF001RTD, ENCFF296VFB, ENCFF355AMN, ENCFF377UGQ, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF932SOZ, DRR091695, DRR091696, SRR10697196, SRR11428467, SRR11428468, SRR11428470, SRR2040601, SRR9178986 chr14 90404377 90404379 + Predicted LINE|L2|L2 ENSMUSG00000115001.2, 4930474H20Rik SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089611, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089621, SRR2089622, SRR2089629, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 90978524 90978525 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000115292.2, Gm33246 SRR2089604, SRR2089650, SRR2089651 chr14 93103991 93104030 - Annotated LINE|L1|Lx6 ENSMUSG00000115720.2, 4930433E05Rik ENSMUST00000226822.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178205, SRR3178206, SRR6904685, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 93393522 93393523 - Predicted LINE|L1|Lx5c ENSMUSG00000055421.9, Pcdh9 SRR9178984, SRR9178988, SRR9178989 chr14 93453074 93453075 - Predicted LINE|L1|L1MdTf_III ENSMUSG00000055421.9, Pcdh9 ENCFF089PFT, ENCFF013CHH, ENCFF134HVE, ENCFF251WZA, ENCFF348FTH, ENCFF510LAE, ENCFF595WXV, ENCFF604SXL, ENCFF840XYZ, ENCFF868WEJ, ENCFF912MUD, ENCFF962FIU, ENCFF119IHT, ENCFF269AST, ENCFF446LMP, ENCFF847LGC chr14 93605383 93605413 - Predicted LTR|ERVL|MT2B ENSMUSG00000055421.9, Pcdh9 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr14 94060246 94060262 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000055421.9, Pcdh9 SRR2089603, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089623, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr14 99481583 99481584 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000022064.11, Pibf1 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr15 100579804 100579843 - Annotated SINE|Alu|B1_Mur2 ENSMUSG00000023031.9, Cela1 ENSMUST00000230572.2 ENCFF051PTY, ENCFF059IQN, ENCFF104LLO, ENCFF421SNO, ENCFF595GFM, ENCFF761RKP, ENCFF852ZDB, ENCFF989HJD, ENCFF996STG, ENCFF087IUJ, ENCFF267KZS, ENCFF338LFG, ENCFF430ERW, ENCFF566HCI, ENCFF871CMC, ENCFF994PPZ chr15 100593654 100593662 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000090062.3, Galnt6os ENSMUST00000229209.2, ENSMUST00000229410.2, ENSMUST00000160960.2 chr15 100645756 100645757 + Annotated LTR|ERVK|RMER17C ENSMUSG00000121200.1, ENSMUSG00000121200 ENSMUST00000247432.1 chr15 101990412 101990413 + Predicted LINE|CR1|L3 ENSMUSG00000058655.10, Eif4b ENCFF001NDZ, ENCFF001NEC, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF102BWR, ENCFF106GQS, ENCFF198RBJ, ENCFF426QFT, ENCFF489IGD, ENCFF575RUC, ENCFF771LLL, ENCFF771YNG, ENCFF793IYH, ENCFF836JVX, ENCFF874ELO, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065TCZ, ENCFF067UCQ, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF233IFH, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF348FTH, ENCFF355AMN, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF975NCY, ENCFF978EQI, ENCFF082OML, ENCFF116DGU, ENCFF324ITL, ENCFF371ZDG, ENCFF781MKK, ENCFF830CBI, ENCFF894SHM, ENCFF937KFC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF667KKO, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, SRR15198217, SRR15198218, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228 chr15 102111009 102111010 - Predicted SINE|B4|B4A ENSMUSG00000023044.3, Csad ENCFF002EZY, ENCFF002FAA, ENCFF782JNB, ENCFF657UWH, ENCFF172DMS, ENCFF433QNW, ENCFF656DRS, DRR091689 chr15 102113486 102113487 - Annotated LINE|L2|L2b NM_001359126.1, NM_001359128.1 ENCFF002EZW, ENCFF027IIP, ENCFF013CHH, ENCFF199ZDO, ENCFF608LAL, ENCFF670FEL, ENCFF854KNE, SRR6904684 chr15 103066654 103066655 - Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000036061.11, ENSMUSG00000097003.2, Smug1, D930007P13Rik ENCFF489IGD, ENCFF467LJD, ENCFF592GVA, ENCFF657UWH, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF923VUD, ENCFF344OJQ, ENCFF783KGQ, SRR15198221, SRR15198222, SRR15198224, SRR15198226 chr15 103387549 103387576 + Annotated SINE|B4|ID_B1 ENSMUSG00000022488.10, Nckap1l ENSMUST00000229835.2, ENSMUST00000230276.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR5643190, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr15 10829137 10829138 + Annotated LTR|ERVL-MaLR|MTEb NR_040357.1 chr15 11630811 11630847 - Annotated LTR|ERVK|RLTR17 ENSMUSG00000115076.2, ENSMUSG00000115804.2, Gm49106, Gm49107 ENSMUST00000228516.2, ENSMUST00000228923.2, ENSMUST00000228129.2 ENCFF001NDD, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178987, SRR9178988, SRR9178991, SRR9178992 chr15 12179718 12179719 + Annotated SINE|Alu|PB1D7 ENSMUSG00000022201.17, Zfr ENSMUST00000140787.2 chr15 12312004 12312005 + Predicted SINE|Alu|PB1D10 ENSMUSG00000022200.9, Golph3 DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR2927113, SRR9178985 chr15 13761106 13761115 - Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000115419.2, Gm49113 ENSMUST00000226118.2 DRR091695, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR11428467, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178992 chr15 14459492 14459517 + Predicted LTR|ERVL-MaLR|ORR1A3 ENSMUSG00000115782.2, Gm49116 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178988 chr15 16496997 16497021 + Annotated LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000115485.2, Gm49126 ENSMUST00000227245.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080664, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178990, SRR9178992 chr15 18064168 18064197 - Annotated LINE|L1|Lx9 ENSMUSG00000115492.2, Gm41277 ENSMUST00000226302.2 DRR091688, DRR091689, DRR091691, DRR091694, DRR091696, DRR091698, DRR091699, SRR10697198, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178979, SRR9178982 chr15 18358128 18358129 - Predicted LINE|L1|Lx3_Mus ENSMUSG00000098150.3, 4921515E04Rik SRR15198217, SRR15198220, SRR15198225 chr15 19395502 19395523 - Predicted LTR|ERVK|RLTR17 ENSMUSG00000114971.2, Gm49162 ENSMUST00000228706.2 DRR091691, DRR091693, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178981, SRR9178982, SRR9178985, SRR9178986 chr15 22860628 22860631 + Predicted LINE|L1|Lx5 ENSMUSG00000040420.16, Cdh18 SRR2089603, SRR2089605, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089641, SRR2089646, SRR2089650, SRR2089651 chr15 23196737 23196744 + Predicted LTR|ERVL-MaLR|MTE-int ENSMUSG00000040420.16, Cdh18 DRR091699, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178985 chr15 24375722 24375743 - Predicted LTR|ERVK|RMER17A ENSMUSG00000115198.2, Gm49729 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080666, SRR9178977, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178987, SRR9178988, SRR9178990, SRR9178992 chr15 24706586 24706587 - Predicted LINE|L1|Lx3B ENSMUSG00000115607.2, Gm2803 DRR091688, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, SRR11428467, SRR13142121, SRR15198223, SRR15198225, SRR2040601, SRR2927113, SRR9178992 chr15 25005046 25005128 - Predicted LINE|L1|L1Lx_I ENSMUSG00000097452.3, Gm2824 ENCFF005GQR, ENCFF013CHH, ENCFF065LOT, ENCFF156YWS, ENCFF222GPK, ENCFF247QZW, ENCFF269SRJ, ENCFF271OHB, ENCFF296VFB, ENCFF308FEA, ENCFF326UXM, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF374YTS, ENCFF377UGQ, ENCFF385UBP, ENCFF394BDJ, ENCFF448TTG, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF533DWD, ENCFF595WXV, ENCFF632LPV, ENCFF636NES, ENCFF657FNE, ENCFF721BNO, ENCFF725ATS, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF818BAS, ENCFF831ISX, ENCFF854MWX, ENCFF886BRO, ENCFF924LPZ, ENCFF962OCF, ENCFF967NOO, ENCFF008XVO, ENCFF075EMK, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF525QIM, ENCFF670VVN, ENCFF749STK, ENCFF803OIY, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL chr15 25128462 25128490 - Annotated LINE|L1|L1MC1 ENSMUSG00000115174.2, Gm35996 ENSMUST00000226274.2 DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697198, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080666, SRR9178982, SRR9178985 chr15 27976961 27976962 - Predicted SINE|Alu|PB1D9 ENSMUSG00000022263.11, Trio ENCFF047LTH, ENCFF106RLX, ENCFF111MWQ, ENCFF127KHN, ENCFF141YUD, ENCFF184ALY, ENCFF210BVU, ENCFF285NFL, ENCFF296ITI, ENCFF301VMF, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF414IHO, ENCFF462HZM, ENCFF470RDW, ENCFF507VMW, ENCFF536ZFC, ENCFF578YPJ, ENCFF661UPO, ENCFF755REI, ENCFF770WIT, ENCFF814TTQ, ENCFF916BSM, ENCFF951PCM, ENCFF984QED chr15 34037801 34037836 - Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000115428.2, Gm41290 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr15 35073367 35073368 - Predicted LTR|ERVL|MT2B2 ENSMUSG00000022329.16, Stk3 ENCFF002EZW, ENCFF002FAA, ENCFF002FAC, ENCFF002FAG, ENCFF106GQS, ENCFF798TFC, SRR15198224, SRR6904683 chr15 35373528 35373535 - Predicted LINE|L1|L1M5 ENSMUSG00000115829.2, 4921515G04Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR11428468, SRR11428469, SRR13142120, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198228, SRR2040601, SRR2927113, SRR9178982, SRR9178985, SRR9178989, SRR9178992 chr15 36726918 36726919 + Annotated LTR|ERVK|RMER17C ENSMUSG00000120875.1, ENSMUSG00000120875 ENSMUST00000246236.1 ENCFF002EZU, ENCFF002EZY, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF437AJW, ENCFF005GQR, ENCFF013CHH, ENCFF065TCZ, ENCFF148XRK, ENCFF156YWS, ENCFF222GPK, ENCFF247QZW, ENCFF269SRJ, ENCFF271OHB, ENCFF296VFB, ENCFF308FEA, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF374YTS, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF533DWD, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF657FNE, ENCFF721BNO, ENCFF725ATS, ENCFF733MXU, ENCFF744OEI, ENCFF831ISX, ENCFF854MWX, ENCFF860XMD, ENCFF886BRO, ENCFF914YDJ, ENCFF924LPZ, ENCFF962OCF, ENCFF967NOO, ENCFF075EMK, ENCFF119IHT, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF525QIM, ENCFF670VVN, ENCFF803OIY, ENCFF847LGC, ENCFF932SOZ, SRR5643191, SRR6904683, SRR6904684 chr15 36726970 36726996 + Predicted LTR|ERVK|RMER17C-int ENSMUSG00000120875.1, ENSMUSG00000120875 ENCFF002EZU, ENCFF002EZY, ENCFF002FAE, ENCFF089PFT, ENCFF437AJW, ENCFF450WAV, ENCFF005GQR, ENCFF013CHH, ENCFF065TCZ, ENCFF148XRK, ENCFF156YWS, ENCFF222GPK, ENCFF247QZW, ENCFF269SRJ, ENCFF271OHB, ENCFF296VFB, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF374YTS, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF657FNE, ENCFF721BNO, ENCFF725ATS, ENCFF733MXU, ENCFF744OEI, ENCFF831ISX, ENCFF854MWX, ENCFF860XMD, ENCFF886BRO, ENCFF914YDJ, ENCFF924LPZ, ENCFF962OCF, ENCFF967NOO, ENCFF075EMK, ENCFF119IHT, ENCFF399XUL, ENCFF499CDP, ENCFF510IAG, ENCFF525QIM, ENCFF670VVN, ENCFF803OIY, ENCFF847LGC, ENCFF932SOZ, SRR5643191, SRR6904683, SRR6904684, SRR6904685 chr15 36866471 36866472 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000120545.1, ENSMUSG00000120545 ENSMUST00000244101.1 ENCFF001RTF, ENCFF001RTJ chr15 36880120 36880121 - Annotated LINE|L2|L2a ENSMUSG00000072618.4, Gm10384 ENSMUST00000100713.4 ENCFF001NDZ, ENCFF001NEC, ENCFF002DND chr15 37997436 37997437 - Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000037487.8, Ubr5 ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF051JGE, ENCFF106GQS, ENCFF229AIZ, ENCFF400XLQ, ENCFF888LGA, ENCFF013SNI, ENCFF049WBL, ENCFF057MDU, ENCFF197OUM, ENCFF302KQL, ENCFF334XFS, ENCFF394AUR, ENCFF538AIM, ENCFF580KHN, ENCFF669PMR, ENCFF775OZV, ENCFF847HFJ, ENCFF881YOK, ENCFF952FJN, ENCFF976SMI, SRR2040601 chr15 37997824 37997825 - Predicted LINE|RTE-BovB|MamRTE1 ENSMUSG00000037487.8, Ubr5 ENCFF048FGD, ENCFF264RIV, ENCFF287KDR, ENCFF327MSM, ENCFF349LIW, ENCFF885AJK, ENCFF383AJS, ENCFF407JTK, ENCFF486GBM chr15 38255523 38255554 - Annotated LINE|L1|Lx9 ENSMUSG00000115307.2, Gm49313 ENSMUST00000227099.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178206, SRR6338004, SRR9080665, SRR9178978, SRR9178980, SRR9178985, SRR9178987, SRR9178992 chr15 38255678 38255679 - Predicted LINE|L1|Lx9 ENSMUSG00000115307.2, Gm49313 SRR10697195, SRR10697200, SRR13142119, SRR15198228, SRR3178203, SRR9080664, SRR9178977, SRR9178979, SRR9178983, SRR9178986 chr15 38520675 38520676 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000037458.16, Azin1 DRR091689, DRR091695, DRR091696, SRR11428467, SRR11428468, SRR11428470, SRR9178977, SRR9178983, SRR9178984, SRR9178987, SRR9178988, SRR9178989, SRR9178992 chr15 3889805 3889816 - Predicted LINE|L1|L1Lx_I ENSMUSG00000055737.13, ENSMUSG00000098177.2, Ghr, Gm4823 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697200, SRR10697201, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9178982, SRR9178985, SRR9178987 chr15 39808203 39808204 - Predicted SINE|MIR|MIRb ENSMUSG00000022305.14, Lrp12 ENCFF027BYX, ENCFF184EAT, ENCFF264DCN, ENCFF297BEX, ENCFF330LWU, ENCFF533JUU, ENCFF590NVM, ENCFF734FHF, ENCFF813ZJI, ENCFF915FID, ENCFF016CHX, ENCFF041PJP, ENCFF047LTH, ENCFF082OML, ENCFF116DGU, ENCFF268ZHE, ENCFF286RSE, ENCFF344VGL, ENCFF366CSN, ENCFF406LFV, ENCFF689UNV, ENCFF713JXV, ENCFF775OZV, ENCFF849PKR, ENCFF934VFW, ENCFF946LMX, SRR9178978, SRR9178987 chr15 40025969 40026004 + Annotated LTR|ERVK|RLTR17 ENSMUSG00000115367.3, Gm33301 ENSMUST00000226809.2, ENSMUST00000245891.1, ENSMUST00000228503.2, NR_155350.1, NR_155349.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr15 44486552 44486553 + Predicted LINE|L1|Lx4A ENSMUSG00000022339.10, Ebag9 SRR2089603, SRR2089607, SRR2089614, SRR2089615, SRR2089617, SRR2089618, SRR2089629, SRR2089630, SRR2089647, SRR2089650 chr15 44521312 44521313 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000022339.10, Ebag9 SRR2089607, SRR2089616, SRR2089618, SRR2089639 chr15 46187313 46187314 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000099751.7, 1700022A22Rik SRR13142119, SRR15198220, SRR9178992 chr15 46187955 46187995 + Annotated LTR|LTR|RLTR4_MM-int ENSMUSG00000099751.7, 1700022A22Rik ENSMUST00000187130.7, ENSMUST00000185294.7, ENSMUST00000189172.2, NR_045509.1 DRR091690, DRR091691, DRR091692, DRR091694, DRR091696, DRR091697, SRR10697196, SRR10697198, SRR10697199, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198219, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904685, SRR9080662, SRR9080663, SRR9178977, SRR9178978, SRR9178982, SRR9178984, SRR9178985, SRR9178987, SRR9178991 chr15 46189005 46189006 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000099751.7, 1700022A22Rik DRR091697, DRR091698, SRR10697196, SRR15198226, SRR2040601, SRR2927113, SRR9178978, SRR9178982, SRR9178985 chr15 47824863 47824864 - Annotated LINE|L1|L1MdFanc_II ENSMUSG00000022311.16, Csmd3 ENSMUST00000110261.2 DRR091693, SRR10697202, SRR13142119, SRR13142120, SRR15198217, SRR15198222, SRR15198224, SRR2927113 chr15 49057740 49057798 + Predicted LTR|ERVK|RLTR10C ENSMUSG00000115775.2, Gm41318 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697199, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080665, SRR9178978, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178989 chr15 51753753 51753754 - Predicted LTR|ERVL|RMER15 ENSMUSG00000115284.2, Gm34678 SRR3178203, SRR3178204, SRR3178205, SRR3178206 chr15 51760483 51760513 + Annotated LINE|L1|L1ME1 ENSMUSG00000115616.2, Gm48923 ENSMUST00000226818.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr15 51863480 51863503 - Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000022314.11, Rad21 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR13142119, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665, SRR9178976, SRR9178979, SRR9178981, SRR9178983, SRR9178985, SRR9178986, SRR9178989, SRR9178990 chr15 52616814 52616815 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000115137.3, Gm34794 ENSMUST00000247264.1 ENCFF102BWR, ENCFF993QUE, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF274ESJ, ENCFF609ZVL, ENCFF970VKB chr15 54996832 54996850 + Annotated DNA|hAT-Charlie|MER5A ENSMUSG00000022419.17, Deptor ENSMUST00000023056.8, ENSMUST00000226687.2, NM_001037937.3 chr15 56264881 56264883 + Predicted LINE|L1|L1MdA_I ENSMUSG00000115064.2, Gm49213 ENCFF001NCP, ENCFF056GXQ, ENCFF064PBF, ENCFF082HKQ, ENCFF083BIG, ENCFF126RJS, ENCFF133PEB, ENCFF192NVI, ENCFF198NQV, ENCFF262URV, ENCFF295SYY, ENCFF307VAF, ENCFF415KCJ, ENCFF443PSO, ENCFF495SQR, ENCFF521UGJ, ENCFF600AGS, ENCFF670YKO, ENCFF771YNG, ENCFF784LWT, ENCFF828WIK, ENCFF858CRT, ENCFF896IIZ, ENCFF962LFN, ENCFF003GJV, ENCFF034WGV, ENCFF054EOL, ENCFF055PZZ, ENCFF082OML, ENCFF095NMU, ENCFF118YHP, ENCFF124SSE, ENCFF136TYP, ENCFF140WZW, ENCFF142PTA, ENCFF155GUC, ENCFF163BDT, ENCFF177LXI, ENCFF179HJV, ENCFF194DAO, ENCFF249LSC, ENCFF261EQP, ENCFF264PYB, ENCFF273CBP, ENCFF303BIV, ENCFF307OHZ, ENCFF315HBU, ENCFF335UNU, ENCFF371ZDG, ENCFF378TYU, ENCFF404HLB, ENCFF420RGI, ENCFF421DHQ, ENCFF427YDU, ENCFF454DOT, ENCFF456GLS, ENCFF479WHZ, ENCFF483KXD, ENCFF497KLL, ENCFF529YFS, ENCFF548HOL, ENCFF578MOR, ENCFF584ZUK, ENCFF597BNT, ENCFF613SEJ, ENCFF655CUI, ENCFF687GPO, ENCFF698WQO, ENCFF706BUS, ENCFF711XWR, ENCFF740WXS, ENCFF753HNF, ENCFF779MMO, ENCFF790WIY, ENCFF794MMU, ENCFF834TET, ENCFF843WRN, ENCFF848UMJ, ENCFF900LFN, ENCFF903KDM, ENCFF926IDV, ENCFF948YKH, ENCFF949QCF, ENCFF953FGT, ENCFF986DZE chr15 58682314 58682315 - Predicted LINE|L1|Lx8 ENSMUSG00000062373.9, Tmem65 SRR2089647, SRR2089648, SRR2089649, SRR2089650 chr15 58897233 58897234 - Predicted SINE|B2|B3A ENSMUSG00000022353.11, Mtss1 SRR2089603, SRR2089605, SRR2089606, SRR2089609, SRR2089610, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089617, SRR2089618, SRR2089619, SRR2089623, SRR2089634, SRR2089635, SRR2089637, SRR2089638, SRR2089641, SRR2089647, SRR2089649 chr15 6074184 6074185 - Annotated LTR|ERVK|ERVB7_2B-LTR_MM NR_155428.1, NR_155429.1 chr15 62939840 62939841 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000115164.3, Gm30159 SRR10697199, SRR10697201, SRR10697202, SRR2927112, SRR2927113, SRR6904684, SRR6904685 chr15 63016628 63016629 - Predicted LINE|L1|Lx5 ENSMUSG00000115164.3, Gm30159 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697201, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR15198217, SRR15198219, SRR15198223, SRR2040601, SRR6338004, SRR9080662, SRR9080665, SRR9080666 chr15 63589229 63589281 - Predicted LINE|L1|L1Lx_IV ENSMUSG00000115520.3, Gm41335 DRR091688, DRR091689, DRR091692, DRR091693, DRR091694, DRR091696, DRR091699, SRR10697197, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643192, SRR6338004, SRR9080665, SRR9178983 chr15 63784145 63784146 - Annotated LTR|ERVL|MT2B ENSMUSG00000055748.13, Gsdmc4 ENSMUST00000188108.7, NM_028992.1 chr15 65975102 65975103 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000056258.10, Kcnq3 ENSMUST00000183354.2 ENCFF437AJW chr15 66443281 66443282 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000072501.6, Phf20l1 SRR2089606, SRR2089635, SRR2089637, SRR2089638, SRR2089649, SRR2089650, SRR2089651 chr15 68719145 68719146 + Predicted LINE|L1|L1MdA_IV ENSMUSG00000069996.4, Gm41341 SRR2089636, SRR2089647, SRR2089649 chr15 7170023 7170031 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000054263.13, Lifr ENSMUST00000226934.2, ENSMUST00000226471.2, ENSMUST00000227727.2, NM_013584.2 ENCFF001RTD, ENCFF001RTN, ENCFF683CWD, ENCFF838YLT chr15 72756447 72756448 - Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000047921.19, Trappc9 SRR2089606, SRR2089636, SRR2089638, SRR2089640, SRR2089647, SRR2089650 chr15 74768869 74768870 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000063522.6, Ly6m ENSMUST00000190826.2 chr15 75223326 75223327 - Predicted LTR|ERVK|RMER17A2 ENSMUSG00000100375.2, Gm28114 DRR091688, DRR091690, DRR091694, DRR091695, DRR091698, SRR15198217, SRR15198223, SRR15198225, SRR2040601, SRR2927113, SRR9178979, SRR9178991 chr15 75914119 75914120 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000102018.9, Iqank1 SRR2089615, SRR2089617, SRR2089619, SRR2089622, SRR2089623, SRR2089635, SRR2089640 chr15 76206625 76206626 + Predicted LINE|L1|Lx8 ENSMUSG00000022561.14, ENSMUSG00000034259.9, Gpaa1, Exosc4 SRR11428469, SRR15198224, SRR15198225, SRR15198226, SRR9178992 chr15 76468724 76468725 + Annotated SINE|Alu|PB1D9 ENSMUSG00000022550.19, Adck5 ENSMUST00000229007.2 chr15 76471335 76471336 - Predicted LINE|L1|Lx8 ENSMUSG00000034022.9, Cpsf1 SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089651 chr15 76544179 76544202 - Predicted SINE|Alu|B1_Mur2 ENSMUSG00000121583.1, ENSMUSG00000121584.1, Tmem276-zftraf1, Tmem276 ENCFF001NDD, ENCFF001RTD, ENCFF001RTN, ENCFF002EZU, ENCFF002FAA, ENCFF002FAE, ENCFF711WAC, ENCFF005GQR, ENCFF013CHH, ENCFF017LOD, ENCFF065LOT, ENCFF065TCZ, ENCFF115LWP, ENCFF143BIC, ENCFF148XRK, ENCFF156YWS, ENCFF199IRM, ENCFF199ZDO, ENCFF233IFH, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF271OHB, ENCFF274ESJ, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF374YTS, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF390NKP, ENCFF394BDJ, ENCFF408NBX, ENCFF444YCN, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF587VDB, ENCFF588DUN, ENCFF595WXV, ENCFF604SXL, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF775SSI, ENCFF818BAS, ENCFF831ISX, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF923VUD, ENCFF933KQV, ENCFF952BCB, ENCFF962OCF, ENCFF967NOO, ENCFF189BIW, ENCFF830CBI, ENCFF014SLC, ENCFF075EMK, ENCFF119IHT, ENCFF269AST, ENCFF344OJQ, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF525QIM, ENCFF670VVN, ENCFF671TUD, ENCFF715CAJ, ENCFF749STK, ENCFF803OIY, ENCFF847LGC, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091691, DRR091694, DRR091696, SRR10697199, SRR10697200, SRR11428468, SRR11428469, SRR13142121, SRR13142123, SRR15198219, SRR15198221, SRR15198223, SRR15198225, SRR15198228, SRR2040601, SRR2927113 chr15 77624961 77624962 + Annotated LTR|ERVL|MT2B1 ENSMUSG00000115979.2, Gm49410 ENSMUST00000230156.2 chr15 78761075 78761090 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000033128.10, Gga1 ENCFF002FAG, ENCFF251TMY, ENCFF308LTO, ENCFF554PUC, ENCFF896IIZ, ENCFF195JLT, ENCFF234LUQ, ENCFF016CHX, ENCFF136DUH, ENCFF275TCB, ENCFF277JGD, ENCFF386HCR, ENCFF443URE, ENCFF454DOT, ENCFF460FON, ENCFF484PQK, ENCFF644EGG, ENCFF655KBW, ENCFF723QWN, ENCFF804EWD, ENCFF817HZQ, ENCFF840DKD, ENCFF248ELC, ENCFF302TQH, ENCFF499GDC, ENCFF854IBU, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178982, SRR9178984, SRR9178985 chr15 78761226 78761227 + Predicted SINE|MIR|MIR ENSMUSG00000033128.10, Gga1 ENCFF056GXQ, ENCFF075MGH, ENCFF114PSQ, ENCFF138TOM, ENCFF196PBF, ENCFF251TMY, ENCFF432ZLQ, ENCFF773VFS, ENCFF823PZU, ENCFF960LQP, ENCFF004AEL, ENCFF016CHX, ENCFF019PVP, ENCFF028XDY, ENCFF111MWQ, ENCFF222MKT, ENCFF302MXO, ENCFF306FQJ, ENCFF386HCR, ENCFF403CRC, ENCFF423GTP, ENCFF443URE, ENCFF454DOT, ENCFF691DJE, ENCFF700IPC, ENCFF817HZQ, ENCFF936DQW, ENCFF936LNA, ENCFF946LMX, ENCFF953FGT, ENCFF983GRF, ENCFF062GNP, ENCFF442OKF, ENCFF653QJY, SRR10697195, SRR10697197, SRR10697201 chr15 79794745 79794746 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000009585.19, Apobec3 ENCFF006JHA, ENCFF098TCZ, ENCFF167GWU, ENCFF189JVE, ENCFF237JCE, ENCFF319YFJ, ENCFF394AUR, ENCFF518TUP, ENCFF565DII, ENCFF565FFU, ENCFF772QLP chr15 79829999 79830000 - Predicted LTR|ERVL-MaLR|MTB ENSMUSG00000053411.17, Cbx7 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr15 80447886 80447887 - Predicted DNA|TcMar-Tigger|MER46C ENSMUSG00000050439.8, Enthd1 DRR091692, DRR091693, SRR13142121, SRR15198222, SRR2927113, SRR9178982 chr15 80581802 80581811 - Annotated SINE|5S-Deu-L2|AmnSINE1 ENSMUSG00000116220.2, A430088P11Rik ENSMUST00000230612.2, ENSMUST00000230325.2, NR_045310.1, NR_045309.1 ENCFF904RJF chr15 80681450 80681451 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000047888.11, Tnrc6b ENCFF262WAE, ENCFF497YRP, ENCFF823PZU, ENCFF828WIK, ENCFF960LQP, ENCFF359GCY, ENCFF455DHP, ENCFF609ZVL, ENCFF012HVN, ENCFF030IFE, ENCFF043DTH, ENCFF052RNG, ENCFF134VWD, ENCFF148BPZ, ENCFF162FTA, ENCFF644EGG, ENCFF772QLP, ENCFF775OZV, ENCFF786BUI, ENCFF794MMU, ENCFF881DTW, ENCFF883APB chr15 81073985 81073986 - Predicted SINE|MIR|MIRb ENSMUSG00000042292.19, Mrtfa DRR091699, SRR10697198, SRR9178976, SRR9178979, SRR9178981, SRR9178983, SRR9178989, SRR9178991 chr15 82027633 82027634 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000068117.11, Mei1 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, SRR11428468, SRR13142118, SRR15198228, SRR9178991 chr15 82229910 82229911 - Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000022453.9, Naga ENCFF326TQL, DRR091696, SRR15198217, SRR15198221, SRR15198226, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178986, SRR9178990, SRR9178991, SRR9178992 chr15 82246742 82246744 + Predicted LTR|ERV1|RLTR6_Mm ENSMUSG00000121069.1, ENSMUSG00000121069 ENCFF017LOD, ENCFF084CWD, ENCFF143BIC, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF269WEZ, ENCFF284AEN, ENCFF315OOH, ENCFF330FNX, ENCFF364LFJ, ENCFF442FJC, ENCFF484HRX, ENCFF521NCL, ENCFF567AFB, ENCFF581KUX, ENCFF588DUN, ENCFF604SXL, ENCFF608LAL, ENCFF651SDJ, ENCFF670FEL, ENCFF683CWD, ENCFF697AST, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF766LGO, ENCFF785TEQ, ENCFF808PVJ, ENCFF826RUZ, ENCFF834VIK, ENCFF838YLT, ENCFF854KNE, ENCFF855FCX, ENCFF862FYE, ENCFF912MUD, ENCFF923VUD, ENCFF933MOZ, ENCFF943XKB, ENCFF969WLB, ENCFF014SLC, ENCFF160TQC, ENCFF197NCG, ENCFF342GAL, ENCFF366CUG, ENCFF454JTI, ENCFF481CFU, ENCFF715CAJ, ENCFF827NYZ, ENCFF906OAF chr15 82246826 82246827 + Predicted LTR|ERV1|RLTR6_Mm ENSMUSG00000121069.1, ENSMUSG00000121069 ENCFF017LOD, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF134HVE, ENCFF143BIC, ENCFF170XMM, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF251WZA, ENCFF269WEZ, ENCFF270ERO, ENCFF284AEN, ENCFF304DLW, ENCFF315OOH, ENCFF330FNX, ENCFF390NKP, ENCFF442FJC, ENCFF444YCN, ENCFF484HRX, ENCFF510LAE, ENCFF521NCL, ENCFF567AFB, ENCFF581KUX, ENCFF588DUN, ENCFF604SXL, ENCFF651SDJ, ENCFF657UWH, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF785TEQ, ENCFF808PVJ, ENCFF826RUZ, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF855FCX, ENCFF862FYE, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF969WLB, ENCFF975NCY, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF366CUG, ENCFF423TSB, ENCFF454JTI, ENCFF481CFU, ENCFF517DCU, ENCFF555BQD, ENCFF641WPY, ENCFF715CAJ, ENCFF827NYZ, ENCFF906OAF chr15 82246895 82246922 + Predicted LTR|ERV1|RLTR6_Mm ENSMUSG00000121069.1, ENSMUSG00000121069 ENCFF017LOD, ENCFF067UCQ, ENCFF101BDM, ENCFF134HVE, ENCFF143BIC, ENCFF170XMM, ENCFF173IVH, ENCFF199ZDO, ENCFF251WZA, ENCFF270ERO, ENCFF284AEN, ENCFF304DLW, ENCFF315OOH, ENCFF330FNX, ENCFF390NKP, ENCFF444YCN, ENCFF484HRX, ENCFF510LAE, ENCFF581KUX, ENCFF588DUN, ENCFF604SXL, ENCFF657UWH, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF728TXU, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF785TEQ, ENCFF808PVJ, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF920FVY, ENCFF923VUD, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF975NCY, ENCFF160TQC, ENCFF199IWW, ENCFF242SVY, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF366CUG, ENCFF423TSB, ENCFF481CFU, ENCFF517DCU, ENCFF555BQD, ENCFF641WPY chr15 82247110 82247111 + Annotated LTR|ERV1|RLTR6_Mm ENSMUSG00000121069.1, ENSMUSG00000121069 ENSMUST00000247064.1 chr15 82250865 82250866 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000121069.1, ENSMUSG00000121069 ENCFF067UCQ, ENCFF236TUH, ENCFF390NKP, ENCFF448TTG, ENCFF572TOH, ENCFF808PVJ, ENCFF248ELC, ENCFF911OIZ chr15 82251671 82251672 + Predicted LTR|ERV1|RLTR6_Mm ENSMUSG00000121069.1, ENSMUSG00000121069 ENCFF084CWD, ENCFF143BIC, ENCFF269WEZ, ENCFF284AEN, ENCFF315OOH, ENCFF339MSB, ENCFF442FJC, ENCFF465BBM, ENCFF468AKL, ENCFF521NCL, ENCFF608LAL, ENCFF670FEL, ENCFF834VIK, ENCFF845NXM, ENCFF854KNE, ENCFF912MUD, ENCFF933MOZ, ENCFF943XKB, ENCFF975NCY, ENCFF075EMK, ENCFF510AYI, ENCFF906OAF chr15 82547237 82547238 - Predicted LINE|L1|Lx3B ENSMUSG00000116341.2, ENSMUSG00000121507.1, Cyp2d36-ps, ENSMUSG00000121507 SRR2089635, SRR2089637, SRR2089639, SRR2089647, SRR2089648, SRR2089649 chr15 83939293 83939311 - Predicted DNA|hAT-Charlie|MER5A ENSMUSG00000022441.18, Efcab6 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697199, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142122, SRR13142123, SRR15198218, SRR15198219, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr15 84208076 84208077 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000022439.10, Parvg ENCFF107XGE, ENCFF283XKV, ENCFF308LTO, ENCFF376MQF, ENCFF421SNO, ENCFF462ABU, ENCFF533CLY, ENCFF645QUX, ENCFF745HSV, ENCFF755IDE, ENCFF761RKP, ENCFF881TID, ENCFF883UYA, ENCFF077CYB, ENCFF111MWQ, ENCFF144EDQ, ENCFF162FTA, ENCFF228CMT, ENCFF275TCB, ENCFF286GUQ, ENCFF397ZQU, ENCFF406NLL, ENCFF483KXD, ENCFF561CZI, ENCFF794MMU, ENCFF804EWD, ENCFF896XAZ, ENCFF951PCM, ENCFF477YHR chr15 84208501 84208588 + Predicted SINE|B4|ID_B1 ENSMUSG00000022439.10, Parvg ENCFF001NCR, ENCFF001NEC, ENCFF022FSI, ENCFF023RRS, ENCFF105KSL, ENCFF116MYR, ENCFF136POG, ENCFF163LPQ, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF210BCB, ENCFF221JIC, ENCFF234MZC, ENCFF262URV, ENCFF297CWJ, ENCFF307VAF, ENCFF347HAB, ENCFF351JWR, ENCFF379JPQ, ENCFF393YET, ENCFF426QFT, ENCFF437AJW, ENCFF470MXU, ENCFF489VZI, ENCFF491XRO, ENCFF495YGN, ENCFF514JOV, ENCFF535YBP, ENCFF544BEF, ENCFF548SLN, ENCFF581WWO, ENCFF643VPC, ENCFF667FDW, ENCFF723KAG, ENCFF723QIC, ENCFF775RSS, ENCFF782JNB, ENCFF787LWL, ENCFF813ZJI, ENCFF876MJS, ENCFF896MQK, ENCFF906FNQ, ENCFF907HVO, ENCFF913CFN, ENCFF931HCN, ENCFF942WIP, ENCFF993QUE, ENCFF013CHH, ENCFF335ZSA, ENCFF348FTH, ENCFF595WXV, ENCFF609ZVL, ENCFF733MXU, ENCFF854MWX, ENCFF886BRO, ENCFF004AEL, ENCFF012KPC, ENCFF015JJB, ENCFF039DES, ENCFF041PJP, ENCFF046HWP, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF073RJJ, ENCFF085RPW, ENCFF090EUZ, ENCFF094RHV, ENCFF133KGZ, ENCFF149BQJ, ENCFF150HVU, ENCFF163GEC, ENCFF177SGB, ENCFF203EWG, ENCFF264PYB, ENCFF278JAU, ENCFF280LCC, ENCFF291SCS, ENCFF296ITI, ENCFF306OWL, ENCFF308WGP, ENCFF315OFF, ENCFF338LFG, ENCFF347EUO, ENCFF358UHV, ENCFF359DNK, ENCFF380BYT, ENCFF387BVS, ENCFF411KCB, ENCFF420RGI, ENCFF421DHQ, ENCFF429TQT, ENCFF458EUS, ENCFF484PQK, ENCFF492HRC, ENCFF497KLL, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF513BRJ, ENCFF517EJZ, ENCFF536ZVF, ENCFF548JDU, ENCFF549IDH, ENCFF552KEA, ENCFF566HCI, ENCFF569ELL, ENCFF572SQL, ENCFF576EOD, ENCFF584OOK, ENCFF584ZUK, ENCFF594GIP, ENCFF598BFX, ENCFF598WAL, ENCFF606XHA, ENCFF611OFH, ENCFF620FXM, ENCFF635XED, ENCFF644GYU, ENCFF656DRS, ENCFF661UPO, ENCFF672WYO, ENCFF678CRA, ENCFF689UNV, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF743NNG, ENCFF749XRU, ENCFF806XNV, ENCFF819JGD, ENCFF860SGX, ENCFF864DTX, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF916BSM, ENCFF926IDV, ENCFF953FGT, ENCFF953WBM, ENCFF955YCX, ENCFF959CWA, ENCFF966VVA, ENCFF974KKD, ENCFF983GRF, ENCFF525QIM, ENCFF932SOZ chr15 84790843 84790875 + Annotated SINE|tRNA|LFSINE_Vert ENSMUSG00000116491.2, 4930513L16Rik ENSMUST00000230387.2, NR_166787.1 DRR091688, DRR091689, DRR091691, DRR091694, DRR091695, DRR091698, SRR10697195, SRR10697196, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR5643190, SRR5643192, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr15 84913149 84913150 + Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000022434.9, Fam118a ENSMUST00000229629.2 chr15 85464453 85464454 + Annotated SINE|MIR|MIR3 ENSMUSG00000097209.3, AU022754 ENSMUST00000229134.2 chr15 85696490 85696501 - Predicted LTR|ERVL|RMER15-int ENSMUSG00000052496.6, ENSMUSG00000064284.13, Pkdrej, Cdpf1 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, SRR10697196, SRR10697198, SRR10697203, SRR11428470, SRR13142118, SRR13142121, SRR13142123, SRR15198223, SRR15198224, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178992 chr15 85696737 85696738 - Predicted LTR|ERVL|RMER15-int ENSMUSG00000052496.6, Pkdrej DRR091688, SRR13142119, SRR15198221, SRR15198227, SRR2040601, SRR6338004 chr15 88744891 88744902 + Predicted SINE|Alu|B1_Mur4 ENSMUSG00000035828.12, Pim3 DRR091691, DRR091695, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697203, SRR15198217, SRR15198218, SRR15198225, SRR15198227, SRR2040601, SRR2927111, SRR9178980, SRR9178983, SRR9178987 chr15 88903424 88903425 + Annotated LINE|L1|L1M2 ENSMUSG00000064481.3, Gm23737 ENSMUST00000082547.3 chr15 89065709 89065732 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000036606.18, Plxnb2 ENCFF001NDA, ENCFF027IIP, ENCFF524EDD, ENCFF641QXI, ENCFF773VFS, ENCFF896MQK, ENCFF296VFB, ENCFF308FEA, ENCFF374YTS, ENCFF500QZK, ENCFF052RNG, ENCFF249LSC, ENCFF357QTB, ENCFF454DOT, ENCFF863LMG, ENCFF269AST, DRR091690, DRR091692, DRR091693, SRR10697196, SRR10697200, SRR10697203, SRR11428467, SRR13142123, SRR15198219, SRR15198222, SRR15198223, SRR15198226, SRR15198228, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178989, SRR9178990 chr15 89155368 89155369 + Predicted LTR|ERVL|MERVL_2A-int ENSMUSG00000036561.10, Ppp6r2 SRR2089647, SRR2089648, SRR2089649 chr15 90778749 90778750 - Predicted LINE|L1|L1_Mur3 ENSMUSG00000116210.2, Spn-ps SRR3178203, SRR3178206, SRR5643192, SRR6904684, SRR6904685 chr15 90804237 90804253 + Predicted DNA|TcMar-Tigger|Tigger5b_Glire ENSMUSG00000116428.2, Gm36618 SRR9178976, SRR2089604, SRR2089606, SRR2089607, SRR2089609, SRR2089614, SRR2089615, SRR2089618, SRR2089619, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr15 91481749 91481791 + Predicted LTR|ERVK|RLTR16 ENSMUSG00000086160.2, 4933438A12Rik ENSMUST00000144579.2 DRR091689, DRR091690, DRR091692, DRR091694, SRR10697196, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428468, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178978, SRR9178979, SRR9178989 chr15 9155476 9155512 - Annotated LTR|ERVL-MaLR|ORR1C1 ENSMUSG00000054115.13, Skp2 ENSMUST00000190131.2, ENSMUST00000190406.2, NM_001285980.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR6338004, SRR6904683, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr15 92242229 92242265 + Annotated LTR|ERVK|RLTR16C_MM ENSMUSG00000097068.4, Gm26760 ENSMUST00000243046.1, ENSMUST00000245586.1, ENSMUST00000242283.1, ENSMUST00000241196.1, ENSMUST00000243831.1, ENSMUST00000181901.3, ENSMUST00000245955.1, ENSMUST00000242200.1, ENSMUST00000241684.1, ENSMUST00000243759.1, ENSMUST00000244011.1, ENSMUST00000242828.1, ENSMUST00000242574.1, ENSMUST00000245251.1, ENSMUST00000241967.1, NR_153785.1 ENCFF001NDD, ENCFF489IGD, ENCFF874ELO, ENCFF302KQL, ENCFF383AJS, SRR15198218, SRR15198223, SRR2927111, SRR2927112 chr15 94363298 94363299 - Annotated LTR|ERV1|RMER2 ENSMUSG00000022449.15, Adamts20 ENSMUST00000128797.2 chr15 94435160 94435162 + Predicted LINE|L1|L1MB3 ENSMUSG00000059883.17, Irak4 DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697200, SRR10697201, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr15 95060274 95060275 - Annotated LTR|ERVK|RMER19B2 ENSMUSG00000100603.7, 1700129L04Rik ENSMUST00000189291.7 SRR10697197, SRR13142119, SRR13142120, SRR15198224, SRR2040601, SRR2927113, SRR9178979 chr15 95670547 95670548 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000115699.3, Gm6961 ENSMUST00000243426.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTJ, ENCFF013CHH chr15 95977307 95977308 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000078925.12, D030018L15Rik ENSMUST00000139808.8 chr15 96645593 96645608 - Annotated DNA|hAT-Charlie|Charlie4z ENSMUSG00000120383.1, ENSMUSG00000120383 ENSMUST00000242911.1, ENSMUST00000245690.1 ENCFF134HVE, ENCFF236TUH, ENCFF304DLW, ENCFF390NKP, ENCFF657UWH, ENCFF686KMX, ENCFF808PVJ, ENCFF840XYZ, ENCFF199IWW, ENCFF641WPY chr15 97065102 97065160 - Annotated LTR|ERVK|MLTR31F_MM ENSMUSG00000116295.3, Gm32885 ENSMUST00000229245.2, ENSMUST00000246871.1, ENSMUST00000231024.3, ENSMUST00000245992.1, ENSMUST00000242956.1, ENSMUST00000246902.1, ENSMUST00000229999.2, ENSMUST00000229491.2, NR_155279.1, NR_155278.1 ENCFF001NDA, ENCFF001NDD, ENCFF002EZU, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr15 97365096 97365097 + Annotated LTR|ERV1|RLTR41 ENSMUSG00000120469.1, ENSMUSG00000120469 ENSMUST00000243552.1 ENCFF001NDA, ENCFF013HYW, ENCFF017LOD, ENCFF274ESJ, ENCFF532UKS, ENCFF933KQV, ENCFF014SLC, ENCFF494ZWE, ENCFF582WGH, ENCFF671TUD, ENCFF904RJF chr15 99819016 99819017 - Predicted LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000023022.15, Lima1 ENCFF001NCP, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr16 10612242 10612243 - Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000038015.7, Prm2 SRR15198219, SRR15198224, SRR15198228 chr16 10645791 10645792 + Annotated SINE|B4|B4 ENSMUSG00000096921.2, Gm26822 ENSMUST00000181732.2 chr16 10849820 10849821 + Annotated LTR|ERVK|RLTR16 ENSMUSG00000115992.2, Gm10832 ENSMUST00000229764.2 chr16 10996197 10996198 + Predicted SINE|Alu|B1_Mur1 ENSMUSG00000096959.2, 4930509G22Rik DRR091691, DRR091697, SRR11428467, SRR11428470, SRR15198222, SRR15198227, SRR15198228, SRR2040601, SRR2927111 chr16 11674307 11674315 - Predicted LINE|L1|Lx8 ENSMUSG00000065979.13, Cpped1 DRR091688, DRR091690, DRR091692, DRR091693, DRR091694, DRR091698, DRR091699, SRR10697197, SRR10697199, SRR11428467, SRR15198217, SRR15198219, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR9178985 chr16 12763790 12763802 - Annotated LINE|L1|Lx8 ENSMUSG00000116520.2, 4930414F18Rik ENSMUST00000230696.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR3178203, SRR6338004, SRR9080664, SRR9080666, SRR9178981, SRR9178988 chr16 13648431 13648457 + Predicted SINE|B2|B3 ENSMUSG00000022681.16, Ntan1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198222, SRR15198223, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643199, SRR6338004, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 13677902 13677903 - Predicted LTR|ERV1|MER65D ENSMUSG00000022680.15, Pdxdc1 ENCFF002ERW, ENCFF002FAC, ENCFF327MSM, SRR3178203, SRR3178204, SRR3178205, SRR3178206 chr16 16418412 16418413 - Annotated LTR|ERV1|RMER5 ENSMUSG00000022788.17, Fgd4 ENSMUST00000159542.8 ENCFF002FAE, ENCFF002FAI, ENCFF437AJW, ENCFF510LAE, SRR15198226, SRR15198228 chr16 17349360 17349381 - Predicted LTR|ERVK|MERVK26-int ENSMUSG00000022760.18, Thap7 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF001RTN, ENCFF064PBF, ENCFF089PFT, ENCFF184EAT, ENCFF214IUN, ENCFF331WKS, ENCFF450WAV, ENCFF696TCH, ENCFF725RXU, ENCFF922KQY, ENCFF013HYW, ENCFF065LOT, ENCFF143BIC, ENCFF261ZZF, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF348FTH, ENCFF454ZUS, ENCFF468AKL, ENCFF510TTU, ENCFF533DWD, ENCFF572TOH, ENCFF632LPV, ENCFF721BNO, ENCFF733MXU, ENCFF775SSI, ENCFF838YLT, ENCFF854MWX, ENCFF860XMD, ENCFF914YDJ, ENCFF962OCF, ENCFF041PJP, ENCFF267KZS, ENCFF380BYT, ENCFF119IHT, ENCFF260KJY, ENCFF349AIG, ENCFF499CDP, ENCFF749STK, ENCFF932SOZ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 19037238 19037239 - Annotated LINE|L1|L1_Rod ENSMUSG00000104927.3, Gm43388 ENSMUST00000246165.1 ENCFF538AIM, ENCFF349AIG chr16 19055586 19055587 - Annotated LTR|ERVK|RMER17B2 ENSMUSG00000104927.3, Gm43388 ENSMUST00000197818.3 chr16 20550133 20550134 + Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000006958.15, Chrd ENCFF002EZU, ENCFF271OHB, ENCFF296VFB, ENCFF308FEA, ENCFF326UXM, ENCFF335ZSA, ENCFF377UGQ, ENCFF500QZK, ENCFF572TOH, ENCFF595WXV, ENCFF636NES, ENCFF657FNE, ENCFF744OEI, ENCFF886BRO, ENCFF525QIM, ENCFF847LGC chr16 21871911 21871912 + Predicted LINE|L1|Lx9 ENSMUSG00000068487.7, Ndufa11b SRR10697195, SRR10697197, SRR10697198, SRR10697201, SRR10697203, SRR15198217, SRR15198221, SRR15198225 chr16 21939985 21940103 - Annotated LINE|L1|L1MA4 ENSMUSG00000033581.18, Igf2bp2 ENSMUST00000231926.2, ENSMUST00000232504.2 ENCFF002FAC, ENCFF022FSI, ENCFF027BYX, ENCFF043JGD, ENCFF048IBL, ENCFF051PTY, ENCFF059IQN, ENCFF075MGH, ENCFF084PUC, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF227OTT, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF297CWJ, ENCFF308LTO, ENCFF326TQL, ENCFF331WKS, ENCFF344LNZ, ENCFF345OIF, ENCFF351JWR, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF445BBH, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF495YGN, ENCFF514JOV, ENCFF527VIY, ENCFF533CLY, ENCFF533JUU, ENCFF534DID, ENCFF554PUC, ENCFF560YXX, ENCFF564YPB, ENCFF585YYC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF625JLB, ENCFF641QXI, ENCFF670CXH, ENCFF711WAC, ENCFF725RXU, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF784LWT, ENCFF793CWJ, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF865WQE, ENCFF880FYC, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF931PFF, ENCFF937GBW, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF002SZY, ENCFF009AON, ENCFF014CMK, ENCFF023TPS, ENCFF033DWC, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF055PZZ, ENCFF056UGH, ENCFF061WTN, ENCFF065ZIE, ENCFF073RJJ, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF116QKZ, ENCFF124SSE, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163DKN, ENCFF170KWW, ENCFF177LXI, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF199AAD, ENCFF235HER, ENCFF243TPB, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF299ENO, ENCFF302MXO, ENCFF313IFI, ENCFF316EEH, ENCFF320CXH, ENCFF332IRR, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF406LFV, ENCFF417OEG, ENCFF424GQM, ENCFF429TQT, ENCFF459TYQ, ENCFF478YRJ, ENCFF482VRF, ENCFF490ULA, ENCFF492HRC, ENCFF505PJK, ENCFF505WKA, ENCFF536ZVF, ENCFF543GNI, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF576EOD, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF644GYU, ENCFF647RUH, ENCFF680WIN, ENCFF693POR, ENCFF707HQI, ENCFF712BKP, ENCFF716NXU, ENCFF727JTZ, ENCFF737VKP, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF755REI, ENCFF765UBL, ENCFF780UQU, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF830CBI, ENCFF834TQY, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF877SON, ENCFF877VSZ, ENCFF896XAZ, ENCFF921PGH, ENCFF932XKS, ENCFF956ZKG, ENCFF999ZYF chr16 22916770 22916771 - Annotated LTR|ERV1|LTRIS2 ENSMUSG00000120550.1, ENSMUSG00000120550 ENSMUST00000244127.1 chr16 23427807 23427808 + Annotated LINE|L1|Lx2B2 ENSMUSG00000033355.7, Rtp4 ENSMUST00000210901.2 chr16 24201115 24201140 - Annotated LTR|ERVK|RMER4B ENSMUSG00000115852.4, Gm52969 ENSMUST00000231554.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 24805015 24805016 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000033306.16, Lpp SRR2089617, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089651 chr16 24996834 24996835 - Annotated LINE|L1|Lx8 ENSMUSG00000120156.1, ENSMUSG00000120156 ENSMUST00000241640.1 ENCFF437AJW chr16 27145390 27145391 - Annotated LTR|ERVL|RMER15 ENSMUSG00000116530.2, Gm32312 ENSMUST00000232586.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ chr16 28104657 28104710 - Predicted LINE|L1|L1Lx_I ENSMUSG00000022523.11, Fgf12 SRR2089603, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089631, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089645, SRR2089647, SRR2089648, SRR2089650, SRR2089651 chr16 28176095 28176096 - Predicted DNA|hAT-Charlie|URR1A ENSMUSG00000022523.11, Fgf12 SRR2089609, SRR2089616, SRR2089636, SRR2089639, SRR2089648 chr16 28196574 28196586 - Predicted LINE|L1|L1MdFanc_II ENSMUSG00000022523.11, Fgf12 DRR091688, DRR091689, DRR091691, DRR091698, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR15198219, SRR15198220, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178986, SRR9178989 chr16 28401604 28401605 - Predicted LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000022523.11, Fgf12 SRR2089609, SRR2089610, SRR2089613, SRR2089615, SRR2089617, SRR2089618, SRR2089632, SRR2089633, SRR2089634, SRR2089638, SRR2089648, SRR2089649, SRR2089650 chr16 29573129 29573130 - Annotated LTR|ERVK|RMER17C ENSMUSG00000116814.2, Gm49636 ENSMUST00000232037.2 chr16 29858124 29858125 - Annotated SINE|MIR|MIR3 ENSMUSG00000116660.3, 9030404E10Rik ENSMUST00000241327.1, ENSMUST00000245337.1 ENCFF102BWR chr16 30014906 30014907 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000101888.2, 1700025H01Rik DRR091691, DRR091692, DRR091697, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697202, SRR11428468, SRR11428470, SRR13142121, SRR13142123, SRR15198224, SRR5643190, SRR5643192, SRR6338004, SRR9080663, SRR9080665, SRR9178981, SRR9178985, SRR9178987, SRR9178988 chr16 30700617 30700618 + Predicted LTR|ERVL|RMER10A ENSMUSG00000116737.2, Gm49757 SRR2089603, SRR2089616, SRR2089619, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089647 chr16 31906972 31906973 - Annotated SINE|Alu|B1F ENSMUSG00000023791.19, Pigx ENSMUST00000151250.8 chr16 31998618 31998642 + Annotated LINE|L1|L1MA7 ENSMUSG00000075269.6, Bex6 ENSMUST00000231941.2, NM_001033539.2 ENCFF002DND, ENCFF102BWR, ENCFF327MSM, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF502ANK, ENCFF993QUE, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF609ZVL, SRR15198223 chr16 32002752 32002753 + Annotated LTR|ERVL|MT2B2 ENSMUSG00000075269.6, Bex6 ENSMUST00000231512.2 ENCFF002DNB chr16 32605343 32605370 - Predicted LINE|L2|L2a ENSMUSG00000035638.15, Muc20 DRR091689, DRR091690, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr16 32879531 32879532 - Predicted SINE|Alu|PB1D11 ENSMUSG00000078489.3, Gm17106 SRR2089623, SRR2089633, SRR2089641, SRR2089646 chr16 32879937 32879938 - Predicted SINE|B4|RSINE1 ENSMUSG00000078489.3, Gm17106 SRR2089621, SRR2089623, SRR2089634, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646 chr16 32990145 32990146 + Predicted LTR|ERVK|RMER19B ENSMUSG00000022807.10, Osbpl11 ENCFF001RTN, ENCFF084CWD, ENCFF269WEZ, ENCFF510LAE, ENCFF854KNE, ENCFF912MUD, ENCFF975NCY, DRR091688, DRR091698, SRR10697196, SRR10697197, SRR10697202, SRR10697203, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR5643191, SRR5643192, SRR6338004, SRR9080663, SRR9080666 chr16 33435416 33435428 + Predicted DNA|hAT-Charlie|MER5A ENSMUSG00000035506.17, Slc12a8 DRR091688, SRR11428470, SRR13142119, SRR15198217, SRR15198226, SRR2040601, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178984, SRR9178987, SRR9178990, SRR9178991, SRR9178992 chr16 33614407 33614408 + Annotated SINE|B4|RSINE1 ENSMUSG00000022824.13, Muc13 ENSMUST00000115044.8, NM_010739.2 ENCFF001NEC, ENCFF002DMZ, ENCFF002DND, ENCFF450WAV, ENCFF334XFS chr16 3451051 3451052 - Annotated LTR|ERVK|RLTR46B NR_165178.1 chr16 35801729 35801776 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000086324.10, Gm15564 ENSMUST00000246870.1, ENSMUST00000246936.1, ENSMUST00000246277.1, ENSMUST00000174085.9, ENSMUST00000245973.1, ENSMUST00000245839.1, ENSMUST00000246749.1, ENSMUST00000246202.1 ENCFF181RDS, ENCFF198RBJ, ENCFF565YJQ chr16 36751515 36751517 + Predicted SINE|Alu|PB1D10 ENSMUSG00000034243.18, Golgb1 ENCFF043JGD, ENCFF140VGY, ENCFF326TQL, ENCFF345OIF, ENCFF482MUH, ENCFF514BEA, ENCFF625JLB, ENCFF802GAN, ENCFF808XFI, ENCFF991TPB, ENCFF002SZY, ENCFF055PZZ, ENCFF116QKZ, ENCFF279EVY, ENCFF332IRR, ENCFF390AUP, ENCFF478YRJ, ENCFF543PXT, ENCFF596INO, ENCFF619SKV, ENCFF680WIN, ENCFF801SNQ, ENCFF869DVY, ENCFF877VSZ, ENCFF956ZKG, ENCFF994PPZ, ENCFF999ZYF chr16 3757376 3757377 - Predicted LINE|L2|L2a ENSMUSG00000085048.2, Gm15537 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089613, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr16 3757997 3757998 - Predicted SINE|Alu|PB1D7 ENSMUSG00000085048.2, Gm15537 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089613, SRR2089617, SRR2089618, SRR2089622, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr16 37663924 37663925 - Predicted LTR|ERVK|MLTR11B ENSMUSG00000120015.1, ENSMUSG00000120015 DRR091688, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113 chr16 4047093 4047095 + Annotated LINE|L1|HAL1 ENSMUSG00000089645.4, Gm5766 ENSMUST00000160520.2, NR_003628.1 DRR091698, SRR13142119, SRR13142120, SRR15198217, SRR15198221, SRR15198226, SRR2927112 chr16 43747171 43747172 - Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000022704.17, Qtrt2 ENSMUST00000146343.8 DRR091688, DRR091694, DRR091695, DRR091697, DRR091698, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR15198218, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR9178982, SRR9178985 chr16 43885720 43885750 - Predicted LTR|ERVL-MaLR|MLT1F ENSMUSG00000036292.15, Gramd1c DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198224, SRR15198225, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9178977, SRR9178980, SRR9178982, SRR9178985, SRR9178986, SRR9178991, SRR9178992 chr16 44994279 44994280 - Predicted LINE|L1|Lx8 ENSMUSG00000022664.12, Slc35a5 ENCFF694EPZ, DRR091689, DRR091692, DRR091694, SRR10697198, SRR10697200, SRR10697203, SRR11428467, SRR13142118, SRR13142119, SRR13142120, SRR2040601, SRR9080662, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178986 chr16 45847759 45847786 - Predicted LINE|L1|L1MC4a ENSMUSG00000087141.2, Plcxd2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178991, SRR9178992 chr16 4821453 4821454 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000022542.8, Septin12 SRR2089637, SRR2089640, SRR2089647, SRR2089648, SRR2089649 chr16 48347622 48347647 + Predicted LTR|ERVL-MaLR|MLT1B ENSMUSG00000022652.8, Morc1 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr16 49674861 49674862 + Annotated LTR|ERVL|RMER15 ENSMUSG00000120744.1, ENSMUSG00000120744 ENSMUST00000245507.1 ENCFF091WMS, ENCFF106RGV, ENCFF305IXM, ENCFF347UAC, ENCFF400XLQ, ENCFF623BKO, ENCFF868XLZ, ENCFF049SEE, ENCFF156ZQH, ENCFF175LCC, ENCFF203EWG, ENCFF275TCB, ENCFF296UDD, ENCFF541HSQ, ENCFF552LXG, ENCFF741PLM, ENCFF812QQI, ENCFF970PLY, ENCFF574YMK, ENCFF749STK, SRR15198225 chr16 49776193 49776194 + Annotated LTR|ERVL|LTR33B NR_153658.1 chr16 50603841 50603842 + Annotated DNA|hAT-Charlie|MER5A1 ENSMUSG00000092276.3, 1700116B05Rik ENSMUST00000174511.2 DRR091688, DRR091693, DRR091695, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 51884501 51884502 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000022637.12, Cblb ENCFF040EEJ, ENCFF196PBF, ENCFF462ABU, ENCFF519IZA, ENCFF535YBP, ENCFF645QUX, ENCFF884DLS, ENCFF982BLT, ENCFF067OYG, ENCFF106RLX, ENCFF118PQI, ENCFF242MZE, ENCFF256UWN, ENCFF328TJH, ENCFF559QXN, ENCFF598PMW, ENCFF843WRN, ENCFF847IGW, ENCFF896XAZ, ENCFF916JWW, ENCFF955WXI chr16 55936674 55936675 - Annotated LTR|ERVK|RLTR17 ENSMUSG00000120961.1, ENSMUSG00000120961 ENSMUST00000246661.1 ENCFF001NCP, ENCFF001NDA, ENCFF001NDD, ENCFF001RTF, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF067UCQ, ENCFF134HVE, ENCFF236TUH, ENCFF808PVJ, ENCFF199IWW, SRR15198226 chr16 56090533 56090559 + Annotated LINE|L1|Lx8 ENSMUSG00000035270.16, Impg2 ENSMUST00000159842.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904683, SRR6904685, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 57019948 57019949 - Predicted SINE|Alu|B1_Mm ENSMUSG00000022749.9, Tbc1d23 ENCFF366BBB, ENCFF600AGS, ENCFF622NXP, ENCFF645QUX, ENCFF764ZUI, ENCFF844KCR, ENCFF844QDN, ENCFF982BLT, ENCFF220GKL, ENCFF292KWK, ENCFF305GPD, ENCFF335UNU, ENCFF366CSN, ENCFF453MPR, ENCFF468RDR, ENCFF512LAN, ENCFF519AKK, ENCFF562MVN, ENCFF663TDQ, ENCFF687STH, ENCFF746ZCS, ENCFF756QJD, ENCFF759WDO, ENCFF803ZUN, ENCFF881YOK chr16 57021570 57021613 - Predicted LTR|ERVL|MT2_Mm ENSMUSG00000022749.9, Tbc1d23 ENSMUST00000231391.2 ENCFF083BIG, ENCFF092YWY, ENCFF106RGV, ENCFF168WHQ, ENCFF192NVI, ENCFF221JIC, ENCFF277XPM, ENCFF330IYN, ENCFF358UFZ, ENCFF522VLI, ENCFF533CLY, ENCFF544BEF, ENCFF605IFN, ENCFF608NVM, ENCFF667FDW, ENCFF672HUA, ENCFF691URX, ENCFF764TGO, ENCFF784LWT, ENCFF883UYA, ENCFF979WZO, ENCFF588DUN, ENCFF019PWU, ENCFF039PJR, ENCFF045YRV, ENCFF077YZF, ENCFF117ZMM, ENCFF142PTA, ENCFF175LCC, ENCFF177LXI, ENCFF198XFF, ENCFF219PCN, ENCFF221ZQB, ENCFF275TCB, ENCFF358UHV, ENCFF404HLB, ENCFF420REU, ENCFF478MHH, ENCFF479WHZ, ENCFF483KXD, ENCFF483SQS, ENCFF486BJT, ENCFF498OHV, ENCFF507VMW, ENCFF524PAV, ENCFF543GNI, ENCFF548HOL, ENCFF557JPW, ENCFF591WVP, ENCFF595NMM, ENCFF598WAL, ENCFF613YNK, ENCFF637GVH, ENCFF640RWH, ENCFF644EGG, ENCFF658NHH, ENCFF661UPO, ENCFF678CRA, ENCFF683WFA, ENCFF694EPZ, ENCFF699SBZ, ENCFF706BUS, ENCFF754VQW, ENCFF789AOM, ENCFF804EWD, ENCFF814PHK, ENCFF904KCQ, ENCFF910CTW, ENCFF996WVL, ENCFF494ZWE chr16 57021667 57021686 - Predicted LTR|ERVL|MT2_Mm ENSMUSG00000022749.9, Tbc1d23 ENCFF001RTF, ENCFF002EZU, ENCFF040EEJ, ENCFF076CCZ, ENCFF083BIG, ENCFF092YWY, ENCFF106RGV, ENCFF147GLI, ENCFF151QHP, ENCFF168WHQ, ENCFF192NVI, ENCFF212JFB, ENCFF221JIC, ENCFF262URV, ENCFF262WAE, ENCFF265LKR, ENCFF277XPM, ENCFF283XKV, ENCFF284OMO, ENCFF330IYN, ENCFF352VWM, ENCFF453XOG, ENCFF462ABU, ENCFF491XRO, ENCFF497YRP, ENCFF522VLI, ENCFF533CLY, ENCFF540XSD, ENCFF544BEF, ENCFF570GTP, ENCFF605IFN, ENCFF608NVM, ENCFF667FDW, ENCFF672HUA, ENCFF691URX, ENCFF704GEB, ENCFF764EJV, ENCFF764TGO, ENCFF784LWT, ENCFF858CRT, ENCFF881UBL, ENCFF883UYA, ENCFF907HVO, ENCFF913CFN, ENCFF951UXE, ENCFF979WZO, ENCFF588DUN, ENCFF008YSM, ENCFF019PWU, ENCFF028XDY, ENCFF045YRV, ENCFF077YZF, ENCFF117ZMM, ENCFF118PQI, ENCFF134VWD, ENCFF142PTA, ENCFF175LCC, ENCFF177LXI, ENCFF198XFF, ENCFF219PCN, ENCFF221ZQB, ENCFF275TCB, ENCFF303BIV, ENCFF366IEQ, ENCFF374VAZ, ENCFF386CRY, ENCFF386HCR, ENCFF404HLB, ENCFF420REU, ENCFF421DHQ, ENCFF478MHH, ENCFF479WHZ, ENCFF483KXD, ENCFF483SQS, ENCFF486BJT, ENCFF498OHV, ENCFF507VMW, ENCFF524PAV, ENCFF529LEZ, ENCFF538ZTW, ENCFF543GNI, ENCFF552LXG, ENCFF591WVP, ENCFF595NMM, ENCFF598BFX, ENCFF598WAL, ENCFF613SEJ, ENCFF613YNK, ENCFF637GVH, ENCFF640RWH, ENCFF644EGG, ENCFF661UPO, ENCFF667RGF, ENCFF678CRA, ENCFF683WFA, ENCFF694EPZ, ENCFF699SBZ, ENCFF706BUS, ENCFF726YTS, ENCFF789AOM, ENCFF814PHK, ENCFF814TTQ, ENCFF853PNO, ENCFF875BUD, ENCFF881DTW, ENCFF904KCQ, ENCFF916BSM, ENCFF917KUH, ENCFF926IDV, ENCFF934QGX, ENCFF494ZWE, SRR15198224 chr16 57021748 57021837 - Predicted LTR|ERVL|MT2_Mm ENSMUSG00000022749.9, Tbc1d23 NM_001358434.1 ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, ENCFF002EZU, ENCFF002EZY, ENCFF002FAG, ENCFF002FAI, ENCFF040EEJ, ENCFF076CCZ, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF126RJS, ENCFF130KZZ, ENCFF138TOM, ENCFF147GLI, ENCFF151QHP, ENCFF162UVS, ENCFF206EGD, ENCFF212JFB, ENCFF221JIC, ENCFF262URV, ENCFF262WAE, ENCFF265LKR, ENCFF283XKV, ENCFF284OMO, ENCFF307VAF, ENCFF312CZB, ENCFF313ERY, ENCFF321BMO, ENCFF330IYN, ENCFF347UAC, ENCFF348VIH, ENCFF352VWM, ENCFF376MQF, ENCFF403ORF, ENCFF421ACV, ENCFF453XOG, ENCFF462ABU, ENCFF489VZI, ENCFF491XRO, ENCFF495SQR, ENCFF497YRP, ENCFF519IZA, ENCFF521UGJ, ENCFF540XSD, ENCFF552NWL, ENCFF565YHF, ENCFF570GTP, ENCFF581WWO, ENCFF605IFN, ENCFF608NVM, ENCFF667FDW, ENCFF671ERF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF743RQJ, ENCFF745HSV, ENCFF755IDE, ENCFF764EJV, ENCFF764TGO, ENCFF783MLO, ENCFF787LWL, ENCFF793CWJ, ENCFF823PZU, ENCFF849GVQ, ENCFF858CRT, ENCFF863RVB, ENCFF868XLZ, ENCFF881UBL, ENCFF884DLS, ENCFF896IIZ, ENCFF907HVO, ENCFF913CFN, ENCFF917RNE, ENCFF924VRI, ENCFF931DDH, ENCFF931HCN, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF960LQP, ENCFF970XZM, ENCFF972IVS, ENCFF979WZO, ENCFF985BLV, ENCFF989HJD, ENCFF003GJV, ENCFF008YSM, ENCFF019PWU, ENCFF024CUG, ENCFF028XDY, ENCFF030IFE, ENCFF037LEJ, ENCFF039DES, ENCFF045YRV, ENCFF047LTH, ENCFF065UBR, ENCFF077CYB, ENCFF087OKI, ENCFF087XKQ, ENCFF089SWU, ENCFF106RLX, ENCFF107YGR, ENCFF111MWQ, ENCFF118PQI, ENCFF121IDD, ENCFF124SSE, ENCFF134PXJ, ENCFF134VWD, ENCFF136TYP, ENCFF141YUD, ENCFF144EDQ, ENCFF149BQJ, ENCFF163BDT, ENCFF177LXI, ENCFF179HJV, ENCFF207HZS, ENCFF210BVU, ENCFF219PCN, ENCFF221ZQB, ENCFF237JCE, ENCFF240OIM, ENCFF254VIN, ENCFF256UWN, ENCFF257EYD, ENCFF260UQJ, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF272WGJ, ENCFF286GUQ, ENCFF296ITI, ENCFF303BIV, ENCFF307OHZ, ENCFF310HAL, ENCFF350KYC, ENCFF353SEU, ENCFF366IEQ, ENCFF374VAZ, ENCFF376PQU, ENCFF386CRY, ENCFF386HCR, ENCFF399TOF, ENCFF404HLB, ENCFF420REU, ENCFF421DHQ, ENCFF423GTP, ENCFF426FAF, ENCFF433QNW, ENCFF439HXQ, ENCFF454DOT, ENCFF464KYQ, ENCFF477MBL, ENCFF479WHZ, ENCFF483SQS, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF497NJW, ENCFF498OHV, ENCFF505YPK, ENCFF513BRJ, ENCFF517BAY, ENCFF524PAV, ENCFF529LEZ, ENCFF537DSI, ENCFF538ZTW, ENCFF543GNI, ENCFF549KAB, ENCFF552LXG, ENCFF573WSG, ENCFF578MOR, ENCFF584ZUK, ENCFF595NMM, ENCFF598BFX, ENCFF601JTS, ENCFF613SEJ, ENCFF614WCH, ENCFF618PVF, ENCFF632HDE, ENCFF637GVH, ENCFF643SBQ, ENCFF655KBW, ENCFF661TOM, ENCFF667RGF, ENCFF673SLO, ENCFF678CRA, ENCFF683WFA, ENCFF694EPZ, ENCFF695XIY, ENCFF696QTS, ENCFF699SBZ, ENCFF705CES, ENCFF706BUS, ENCFF726YTS, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF770WIT, ENCFF772QLP, ENCFF786BUI, ENCFF794MMU, ENCFF796TQV, ENCFF806MTS, ENCFF812QQI, ENCFF814TTQ, ENCFF816CPX, ENCFF821HAZ, ENCFF847IGW, ENCFF853PNO, ENCFF858OFI, ENCFF869MFM, ENCFF875BUD, ENCFF881DTW, ENCFF883APB, ENCFF885ZAO, ENCFF896XAZ, ENCFF899EJT, ENCFF903KDM, ENCFF903ULI, ENCFF904KCQ, ENCFF908MGO, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF926IDV, ENCFF934QGX, ENCFF938CNS, ENCFF951PCM, ENCFF953FGT, ENCFF962ZCT, ENCFF974KKD, ENCFF974XWJ, SRR15198224 chr16 57021896 57021902 - Predicted LTR|ERVL-MaLR|ORR1A3-int ENSMUSG00000022749.9, Tbc1d23 ENCFF001NCR, ENCFF001RTJ, ENCFF002EZY, ENCFF002FAG, ENCFF002FAI, ENCFF075MGH, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF126RJS, ENCFF130KZZ, ENCFF138TOM, ENCFF162UVS, ENCFF206EGD, ENCFF307VAF, ENCFF312CZB, ENCFF313ERY, ENCFF321BMO, ENCFF347UAC, ENCFF348VIH, ENCFF376MQF, ENCFF379JPQ, ENCFF403ORF, ENCFF421ACV, ENCFF489VZI, ENCFF495SQR, ENCFF519IZA, ENCFF521UGJ, ENCFF552NWL, ENCFF565YHF, ENCFF581WWO, ENCFF671ERF, ENCFF705JRV, ENCFF743RQJ, ENCFF745HSV, ENCFF755IDE, ENCFF783MLO, ENCFF787LWL, ENCFF793CWJ, ENCFF823PZU, ENCFF849GVQ, ENCFF863RVB, ENCFF868XLZ, ENCFF884DLS, ENCFF917RNE, ENCFF924VRI, ENCFF931DDH, ENCFF931HCN, ENCFF946AGD, ENCFF951MOU, ENCFF960LQP, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF003GJV, ENCFF024CUG, ENCFF030IFE, ENCFF037LEJ, ENCFF039DES, ENCFF047LTH, ENCFF065UBR, ENCFF077CYB, ENCFF087OKI, ENCFF087XKQ, ENCFF089SWU, ENCFF106RLX, ENCFF107YGR, ENCFF111MWQ, ENCFF124SSE, ENCFF134PXJ, ENCFF136TYP, ENCFF141YUD, ENCFF144EDQ, ENCFF149BQJ, ENCFF163BDT, ENCFF207HZS, ENCFF210BVU, ENCFF237JCE, ENCFF240OIM, ENCFF247VEN, ENCFF256UWN, ENCFF257EYD, ENCFF260UQJ, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF272WGJ, ENCFF286GUQ, ENCFF296ITI, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF350KYC, ENCFF353SEU, ENCFF376PQU, ENCFF399TOF, ENCFF423GTP, ENCFF426FAF, ENCFF429ZEH, ENCFF433QNW, ENCFF439HXQ, ENCFF454DOT, ENCFF464KYQ, ENCFF477MBL, ENCFF484PQK, ENCFF485GFE, ENCFF497NJW, ENCFF505YPK, ENCFF513BRJ, ENCFF517BAY, ENCFF524FJG, ENCFF537DSI, ENCFF573WSG, ENCFF578MOR, ENCFF584ZUK, ENCFF601JTS, ENCFF612KDP, ENCFF614WCH, ENCFF618PVF, ENCFF632HDE, ENCFF643SBQ, ENCFF655KBW, ENCFF657NUT, ENCFF673SLO, ENCFF695XIY, ENCFF696QTS, ENCFF696TTO, ENCFF705CES, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF770WIT, ENCFF772QLP, ENCFF786BUI, ENCFF794MMU, ENCFF796TQV, ENCFF806MTS, ENCFF812QQI, ENCFF816CPX, ENCFF821HAZ, ENCFF847IGW, ENCFF858OFI, ENCFF859MTL, ENCFF869MFM, ENCFF883APB, ENCFF885ZAO, ENCFF896XAZ, ENCFF899EJT, ENCFF903KDM, ENCFF903ULI, ENCFF908MGO, ENCFF916JWW, ENCFF938CNS, ENCFF951PCM, ENCFF953FGT, ENCFF962ZCT, ENCFF974KKD chr16 57022313 57022314 - Predicted LTR|ERVL|MERVL-int ENSMUSG00000022749.9, Tbc1d23 ENCFF056GXQ, ENCFF279BVM, ENCFF524EDD, ENCFF771LLL, ENCFF002ZAX, ENCFF271RFU, ENCFF277JGD, ENCFF422CQE, ENCFF533ZIO, ENCFF820JMO chr16 57101253 57101254 + Annotated LTR|ERVK|RLTR44B ENSMUSG00000097896.2, Gm26800 ENSMUST00000180871.2 chr16 57113213 57113272 - Annotated LTR|ERVL|MLT2D ENSMUSG00000022753.16, Tmem30c ENSMUST00000119407.8, ENSMUST00000023434.15, ENSMUST00000120112.2, NM_027651.1 DRR091689, DRR091690, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142122, SRR13142123, SRR15198220, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR2040601, SRR2927111, SRR2927113, SRR5643190, SRR5643201, SRR6338004, SRR6904685, SRR9080662, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 57479516 57479517 - Predicted SINE|MIR|MIR ENSMUSG00000068196.6, Col8a1 SRR2089610, SRR2089635, SRR2089649 chr16 58280554 58280609 + Annotated LTR|ERVK|RMER17A2 ENSMUSG00000035107.14, Dcbld2 ENSMUST00000150817.8, ENSMUST00000130409.8, ENSMUST00000135415.2 DRR091688, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR15198222, SRR15198224, SRR15198226, SRR15198227, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 58578939 58578940 - Predicted LINE|L1|L1M3 ENSMUSG00000071510.4, Or5k1b SRR2089647, SRR2089650, SRR2089651 chr16 58586749 58586750 - Predicted LINE|L1|L1MdF_II ENSMUSG00000071510.4, Or5k1b SRR2089648, SRR2089650, SRR2089651 chr16 58599511 58599512 - Predicted LINE|L1|L1MdTf_II ENSMUSG00000049362.7, Or5k1 SRR2089622, SRR2089648, SRR2089649, SRR2089650 chr16 58749794 58749824 + Predicted LINE|L1|L1MA6 ENSMUSG00000062105.6, Or5h17 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 59374319 59374333 - Annotated SINE|Alu|PB1D11 ENSMUSG00000022723.17, Crybg3 ENSMUST00000139989.3 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697201, SRR10697202, SRR11428468, SRR2040601, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 59374395 59374396 - Predicted SINE|Alu|PB1D11 ENSMUSG00000022723.17, Crybg3 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697201, SRR10697202, SRR11428468, SRR2040601, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 69597268 69597350 - Annotated LINE|L1|Lx9 ENSMUSG00000107073.2, 4930428D20Rik ENSMUST00000201886.2, NR_130991.1 DRR091691, DRR091692, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR5643191, SRR9080662, SRR9080663, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 69660615 69660680 - Annotated LINE|L1|Lx2A1 ENSMUSG00000063163.14, Speer2 ENSMUST00000076500.14, NM_173069.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 70021868 70021906 + Annotated LTR|ERVK|RMER17A NR_168689.1 DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697201, SRR11428467, SRR11428468, SRR13142119, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR9080662, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178982, SRR9178984, SRR9178985, SRR9178988, SRR9178989, SRR9178991 chr16 70751176 70751177 + Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000116800.2, Gm29823 ENSMUST00000232603.2 DRR091691, SRR11428468, SRR13142118, SRR13142120, SRR15198220, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178976 chr16 70927983 70927984 + Predicted LINE|L1|L1Lx_I ENSMUSG00000116750.2, 4931420L22Rik DRR091694, SRR10697196, SRR10697198, SRR10697202, SRR13142118, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198226, SRR2040601, SRR2927113, SRR9178985 chr16 71046772 71046793 + Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000116982.2, 4930567J20Rik ENSMUST00000231541.2, NR_040576.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9178977, SRR9178978, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 72869240 72869304 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000116976.2, 4930500H12Rik ENSMUST00000232059.2, ENSMUST00000231534.2, ENSMUST00000232006.2, ENSMUST00000232597.2, ENSMUST00000232507.2, ENSMUST00000231838.2, ENSMUST00000232394.2, ENSMUST00000231943.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR3178205, SRR5643190, SRR5643191, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 75452420 75452421 + Predicted LTR|ERVK|RLTR31B2 ENSMUSG00000121375.1, ENSMUSG00000121375 SRR10697200, SRR10697203, SRR15198217, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr16 76595243 76595260 - Predicted LINE|L2|L2a ENSMUSG00000109333.2, Gm30790 DRR091688, DRR091691, DRR091692, DRR091698, DRR091699, SRR10697203, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR15198223, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR9178984, SRR9178987 chr16 78071887 78071942 - Annotated DNA|hAT-Tip100|Zaphod ENSMUSG00000109841.4, E330011O21Rik ENSMUST00000210839.2, ENSMUST00000231730.2, ENSMUST00000210555.2 ENCFF067UCQ, ENCFF785TEQ, ENCFF868WEJ, ENCFF423TSB, ENCFF888IIL chr16 78091856 78091910 - Annotated LTR|ERVL|RMER15 ENSMUSG00000109841.4, E330011O21Rik ENSMUST00000231981.2, ENSMUST00000231644.2, ENSMUST00000232400.2, ENSMUST00000231226.2 ENCFF429BQZ, ENCFF519YGA, ENCFF596QWT, ENCFF721ASG, ENCFF782NPY, ENCFF803VZZ, ENCFF978EQI, ENCFF733LFV, ENCFF888IIL chr16 81628676 81628681 + Predicted LINE|L1|Lx3A ENSMUSG00000116909.2, Gm49559 DRR091689, DRR091690, DRR091692, DRR091693, DRR091696, DRR091697, DRR091698, SRR11428469, SRR11428470, SRR13142120, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6904685, SRR9178985 chr16 81969175 81969198 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000116937.2, Gm41480 ENSMUST00000232378.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 84542796 84542797 - Annotated LTR|ERVL|ERVL-B4-int ENSMUSG00000120279.1, ENSMUSG00000120279 ENSMUST00000242262.1, ENSMUST00000246509.1 ENCFF134HVE, ENCFF592GVA, ENCFF920FVY, ENCFF641WPY, SRR2927111, SRR2927112, SRR5643192 chr16 84542901 84542902 - Annotated LTR|ERVL|ERVL-B4-int NR_168512.1 ENCFF001RTD, ENCFF001RTN, ENCFF641WPY, SRR2927111, SRR2927112, SRR5643192 chr16 84590271 84590272 + Predicted SINE|B4|B4 ENSMUSG00000053062.17, Jam2 DRR091697, DRR091698, SRR11428467, SRR11428469, SRR13142118, SRR15198218, SRR15198220, SRR2040601, SRR9080666, SRR9178982 chr16 84590417 84590452 + Annotated SINE|B4|B4 ENSMUSG00000053062.17, Jam2 ENSMUST00000231910.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428470, SRR13142120, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR6338004, SRR9080662, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 85350825 85350831 - Predicted DNA|hAT-Charlie|MER5A ENSMUSG00000089698.2, Gm2541 ENSMUST00000161209.2 ENCFF297BEX, ENCFF711WAC, ENCFF775RSS, ENCFF802GAN, ENCFF922KQY, ENCFF935XRF, ENCFF996STG, ENCFF052WUB, ENCFF060JCS, ENCFF067UCQ, ENCFF134HVE, ENCFF151YNV, ENCFF170XMM, ENCFF245ZOR, ENCFF261ZZF, ENCFF270ERO, ENCFF296VFB, ENCFF304DLW, ENCFF369YLA, ENCFF377LAC, ENCFF484HRX, ENCFF590LNP, ENCFF657UWH, ENCFF704WWK, ENCFF721ASG, ENCFF756QCA, ENCFF782NPY, ENCFF804UQS, ENCFF829RHM, ENCFF868WEJ, ENCFF978EQI, ENCFF046HWP, ENCFF156XMZ, ENCFF352KGC, ENCFF380BYT, ENCFF614WCH, ENCFF727JTZ, ENCFF747VYT, ENCFF809QBQ, ENCFF869DVY, ENCFF877VSZ, ENCFF160TQC, ENCFF254YNR, ENCFF277QHC, ENCFF344OJQ, ENCFF423TSB, ENCFF446LMP, ENCFF517DCU, ENCFF592WZB, ENCFF626KIV, ENCFF705HQV, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF782WDV, SRR10697197, SRR9080665, SRR9178976, SRR9178979, SRR9178982, SRR9178984, SRR9178987 chr16 8601256 8601257 - Predicted LTR|ERVK|RLTR20A3_MM ENSMUSG00000022710.18, Usp7 ENCFF001NCP, ENCFF001NCR, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, SRR10697197, SRR10697199, SRR10697202, SRR10697203, SRR11428467, SRR15198220, SRR15198223, SRR15198228, SRR2927111, SRR2927112, SRR2927113 chr16 8610171 8610172 - Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000022710.18, Usp7 ENSMUST00000160405.8 ENCFF001NDA, ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, DRR091691, DRR091692, DRR091695, DRR091699, SRR15198217, SRR15198218, SRR15198219, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113 chr16 86603251 86603252 - Annotated LTR|ERVK|LTR10_RN ENSMUSG00000116993.3, Gm32461 ENSMUST00000232333.3 chr16 86603400 86603401 - Annotated LTR|ERVK|LTR10_RN ENSMUSG00000116993.3, Gm32461 ENSMUST00000231875.2, NR_153789.1 SRR5643200 chr16 86676975 86676991 - Predicted LINE|L1|Lx10 ENSMUSG00000116993.3, Gm32461 DRR091691, DRR091694, DRR091699, SRR11428470, SRR15198222, SRR15198223, SRR15198226, SRR5643190, SRR9080666 chr16 8930397 8930401 - Predicted LINE|L1|L1_Mur3 ENSMUSG00000116348.2, Gm18722 SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089611, SRR2089612, SRR2089616, SRR2089621, SRR2089633, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr16 89652903 89652904 - Predicted LINE|L2|L2 ENSMUSG00000002489.17, Tiam1 ENCFF002DNB, ENCFF002ERU, ENCFF022FSI, ENCFF198RBJ, ENCFF088SVK, ENCFF291SCS, ENCFF334XFS, ENCFF552KEA, ENCFF582WGH, SRR6904684 chr16 90146478 90146492 - Predicted LTR|ERVK|IAPEY4_LTR ENSMUSG00000116656.2, Gm49708 ENCFF002FAA, ENCFF027RRZ, ENCFF033ZUH, ENCFF067UCQ, ENCFF084CWD, ENCFF115LWP, ENCFF134HVE, ENCFF170XMM, ENCFF173IVH, ENCFF223BXU, ENCFF236TUH, ENCFF269WEZ, ENCFF270ERO, ENCFF284AEN, ENCFF304DLW, ENCFF330FNX, ENCFF339MSB, ENCFF390NKP, ENCFF391UFN, ENCFF442FJC, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF510LAE, ENCFF521NCL, ENCFF573UIH, ENCFF581KUX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF686KMX, ENCFF694NRG, ENCFF728TXU, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF826RUZ, ENCFF834VIK, ENCFF840XYZ, ENCFF854KNE, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF920FVY, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF964WZW, ENCFF975NCY, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF306ADU, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF423TSB, ENCFF446LMP, ENCFF517DCU, ENCFF641WPY, ENCFF723MAR, ENCFF906OAF, SRR15198217, SRR15198218, SRR15198219, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927113, SRR6338004 chr16 90146760 90146761 - Predicted LTR|ERVK|IAPEY4_LTR ENSMUSG00000116656.2, Gm49708 ENCFF002FAC, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR2040601, SRR2927112 chr16 90473887 90473888 - Annotated DNA|TcMar-Tigger|Tigger5b_Glire ENSMUSG00000116582.2, Gm36169 ENSMUST00000232154.2 chr16 90840447 90840476 + Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000085398.2, 4931406G06Rik ENCFF043JGD, ENCFF084PUC, ENCFF091WMS, ENCFF119KNP, ENCFF121BYS, ENCFF138QRF, ENCFF178ZVU, ENCFF179WPT, ENCFF205GJI, ENCFF214IUN, ENCFF221JNS, ENCFF262URV, ENCFF289WHW, ENCFF312CZB, ENCFF326TQL, ENCFF332ZPO, ENCFF344LNZ, ENCFF404PYQ, ENCFF421SNO, ENCFF533JUU, ENCFF534DID, ENCFF540XSD, ENCFF564YPB, ENCFF590NVM, ENCFF600AGS, ENCFF670CXH, ENCFF686EWL, ENCFF755FCM, ENCFF793STU, ENCFF794FBC, ENCFF802GAN, ENCFF808XFI, ENCFF865WQE, ENCFF896IIZ, ENCFF912RLS, ENCFF924VRI, ENCFF937GBW, ENCFF951MOU, ENCFF002SZY, ENCFF013SNI, ENCFF061WTN, ENCFF065ZIE, ENCFF116QKZ, ENCFF118YHP, ENCFF189BIW, ENCFF199AAD, ENCFF222MKT, ENCFF228CMT, ENCFF249LSC, ENCFF279EVY, ENCFF297PPT, ENCFF308WGP, ENCFF332IRR, ENCFF344VGL, ENCFF378TYU, ENCFF490ULA, ENCFF505PJK, ENCFF505WKA, ENCFF513BRJ, ENCFF548JDU, ENCFF552KEA, ENCFF557JPW, ENCFF596INO, ENCFF611QZE, ENCFF614WCH, ENCFF619SKV, ENCFF658NHH, ENCFF695XIY, ENCFF698WQO, ENCFF707HQI, ENCFF747VYT, ENCFF750IZJ, ENCFF780UQU, ENCFF817HZQ, ENCFF840DKD, ENCFF926FRX chr16 90996855 90996874 - Predicted LTR|ERVK|RLTR31D_MM ENSMUSG00000116763.2, Gm41492 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR9080664, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 91700799 91700800 - Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000116933.2, Atp5o DRR091690, DRR091691, DRR091696, DRR091699, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR5643192, SRR5643199, SRR5643201 chr16 92842491 92842527 + Predicted LTR|ERVL-MaLR|MLT1A0 ENSMUSG00002075263.1, Gm54553 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR5643199, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178989 chr16 93606322 93606338 + Annotated SINE|B4|ID_B1 ENSMUSG00000022946.11, Dop1b ENSMUST00000228423.2 ENCFF002DND, DRR091688, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697202, SRR11428468, SRR13142118, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991 chr16 93685622 93685623 + Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000116890.2, Gm49617 ENSMUST00000232065.2 ENCFF297CWJ, ENCFF326TQL, ENCFF670CXH, ENCFF782JNB, ENCFF352KGC, ENCFF387BVS, ENCFF490ULA, ENCFF505WKA chr16 93779439 93779476 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000116681.2, Gm49618 ENSMUST00000231886.2, ENSMUST00000232110.2 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198218, SRR15198225, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR3178204, SRR3178205, SRR3178206, SRR5643191, SRR5643199, SRR6338004, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178992 chr16 94046943 94046944 - Annotated LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000040820.17, Hlcs ENSMUST00000228910.2 ENCFF051JGE, ENCFF102BWR, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF455DHP, ENCFF609ZVL, ENCFF178HDG, ENCFF349AIG, ENCFF477YHR chr16 94421004 94421005 + Predicted LTR|ERVL|MT2B2 ENSMUSG00000022897.16, Dyrk1a ENCFF710DAI, ENCFF745HSV, ENCFF884TJE, ENCFF002ZAX, ENCFF443URE, ENCFF512LAN, ENCFF585CYT, ENCFF680OWA, ENCFF681EEO, ENCFF806MTS, ENCFF910CTW chr16 94657530 94657555 - Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000043301.17, Kcnj6 ENSMUST00000232562.2, ENSMUST00000165538.3, NM_001025590.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr16 95722536 95722537 + Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000120519.1, ENSMUSG00000120519 ENSMUST00000243931.1 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ chr16 95898404 95898425 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000117270.2, Gm49953 ENSMUST00000232779.2, ENSMUST00000233834.2, ENSMUST00000233230.2, ENSMUST00000233851.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178989, SRR9178992 chr17 12352092 12352093 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000023827.9, Agpat4 ENSMUST00000167792.2 chr17 12685731 12685732 + Annotated LTR|ERVL|MT2B1 NR_077217.1, NR_077216.1 ENCFF271OHB chr17 13005010 13005011 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000023830.15, Igf2r ENCFF522VLI, ENCFF823PZU, ENCFF019PVP, ENCFF065UBR, ENCFF219PCN, ENCFF247VEN, ENCFF268YSJ, ENCFF464KYQ, ENCFF573WSG, ENCFF668SQN, ENCFF681EEO, ENCFF812QQI, ENCFF848UMJ, ENCFF883APB, ENCFF997QQG chr17 13020150 13020198 - Predicted LINE|L1|L1M ENSMUSG00000023830.15, Igf2r ENCFF138TOM, ENCFF312CZB, ENCFF330LWU, ENCFF348VIH, ENCFF491XRO, ENCFF671ERF, ENCFF698LQF, ENCFF705JRV, ENCFF876MJS, ENCFF881UBL, ENCFF960LQP, ENCFF009AVK, ENCFF030IFE, ENCFF039DES, ENCFF078CCF, ENCFF090EUZ, ENCFF106GHS, ENCFF118YHP, ENCFF121IDD, ENCFF136TYP, ENCFF142PTA, ENCFF148BPZ, ENCFF167GWU, ENCFF169JOQ, ENCFF174EGP, ENCFF184ALY, ENCFF209LBA, ENCFF223SMG, ENCFF229CPV, ENCFF254TFB, ENCFF260UQJ, ENCFF271RFU, ENCFF277JGD, ENCFF307OHZ, ENCFF308WGP, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF422ZNC, ENCFF427YDU, ENCFF433QNW, ENCFF515GXB, ENCFF527XBQ, ENCFF536ZFC, ENCFF588JAU, ENCFF601JTS, ENCFF632HDE, ENCFF635XED, ENCFF640RWH, ENCFF655KBW, ENCFF678CRA, ENCFF685FUZ, ENCFF696VQM, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF705CES, ENCFF711XWR, ENCFF724VJN, ENCFF726YTS, ENCFF755REI, ENCFF770WIT, ENCFF794GVC, ENCFF803ZUN, ENCFF814PHK, ENCFF816CPX, ENCFF818ZJQ, ENCFF854LJN, ENCFF894COY, ENCFF916BSM, ENCFF938CNS, ENCFF974XWJ, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF996WVL chr17 13213051 13213056 - Annotated LTR|ERVL|MT2C_Mm ENSMUSG00000060475.14, Wtap ENSMUST00000233867.2, ENSMUST00000233467.2 ENCFF040EEJ, ENCFF696TCH, ENCFF420RGI, ENCFF996AOW chr17 15257163 15257164 + Predicted LINE|L1|L1Lx_III ENSMUSG00000036552.20, Ermard ENCFF205GJI, ENCFF234MZC, ENCFF284OMO, ENCFF307VAF, ENCFF605IFN, ENCFF686EWL, ENCFF009AVK, ENCFF149BQJ, ENCFF151XBP, ENCFF203EWG, ENCFF421DHQ, ENCFF484PQK, ENCFF524FJG, ENCFF635XED, ENCFF696QTS, ENCFF998BIQ, SRR13142121 chr17 15852009 15852051 + Annotated LTR|ERVK|RLTR42-int ENSMUSG00000116924.2, 4933401D09Rik ENSMUST00000231675.2, ENSMUST00000231822.2, NR_045431.1 SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198225, SRR15198226, SRR15198227, SRR2927111, SRR2927112, SRR2927113 chr17 19119279 19119300 + Predicted LTR|ERV1|MMVL30-int ENSMUSG00000116670.2, Gm49752 ENCFF027RRZ, ENCFF033ZUH, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF269WEZ, ENCFF284AEN, ENCFF315OOH, ENCFF364LFJ, ENCFF442FJC, ENCFF446FOZ, ENCFF510LAE, ENCFF521NCL, ENCFF581KUX, ENCFF651SDJ, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF728TXU, ENCFF826RUZ, ENCFF862FYE, ENCFF912MUD, ENCFF933MOZ, ENCFF952BCB, ENCFF366CUG, ENCFF454JTI, ENCFF517DCU, ENCFF667KKO, ENCFF827NYZ, ENCFF906OAF chr17 19120572 19120582 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000116670.2, Gm49752 ENCFF084CWD, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF269WEZ, ENCFF442FJC, ENCFF446FOZ, ENCFF510LAE, ENCFF521NCL, ENCFF567AFB, ENCFF573UIH, ENCFF608LAL, ENCFF651SDJ, ENCFF670FEL, ENCFF737OUQ, ENCFF754TOT, ENCFF826RUZ, ENCFF834VIK, ENCFF845NXM, ENCFF854KNE, ENCFF933MOZ, ENCFF943XKB, ENCFF969WLB, ENCFF975NCY, ENCFF454JTI, ENCFF827NYZ, ENCFF906OAF chr17 19283546 19283557 + Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000096717.3, Vmn2r98 SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 19635693 19635695 + Annotated LINE|L1|Lx3_Mus ENSMUSG00000116984.2, 4930549P19Rik ENSMUST00000231951.2 DRR091689, SRR10697199, SRR11428467, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113 chr17 21695173 21695174 + Annotated LTR|ERV1|MMVL30-int ENSMUSG00000121093.1, ENSMUSG00000121093 ENSMUST00000247106.1 chr17 22020264 22020295 + Predicted LTR|ERVK|IAPLTR3 ENSMUSG00000047189.4, Gm9818 DRR091689, DRR091690, DRR091692, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 22204289 22204325 + Predicted LTR|ERVK|RMER13A ENSMUSG00000053347.16, Zfp943 SRR2089603, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089616, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 24042499 24042500 + Annotated LINE|L2|L2c ENSMUSG00000039218.18, Srrm2 ENSMUST00000190568.2 ENCFF198RBJ chr17 24088334 24088335 + Predicted LINE|CR1|L3 ENSMUSG00000024116.7, Prss21 SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643199, SRR6904685 chr17 25992194 25992195 + Predicted LINE|L1|L1MdV_III ENSMUSG00000002280.12, Ciao3 DRR091688, DRR091689, DRR091691, DRR091692, DRR091696, DRR091699, SRR10697196, SRR10697200, SRR10697202, SRR13142123, SRR15198218, SRR15198219, SRR15198223, SRR15198225, SRR9080663 chr17 27275054 27275055 - Predicted SINE|B2|B3 ENSMUSG00000117799.2, Gm50295 ENCFF001NCP, ENCFF001NDZ, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF194DAO, ENCFF591WVP, ENCFF477YHR chr17 27304781 27304824 + Predicted SINE|B2|B3 ENSMUSG00000042644.10, Itpr3 SRR2089610, SRR2089611, SRR2089613, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089637, SRR2089638, SRR2089647 chr17 28127585 28127639 - Predicted SINE|B2|B3 ENSMUSG00000024218.14, Taf11 ENCFF007RPT, ENCFF074HTO, ENCFF084PUC, ENCFF102AMK, ENCFF104LLO, ENCFF117BGT, ENCFF130KZZ, ENCFF133PEB, ENCFF139MHN, ENCFF142CUS, ENCFF163LPQ, ENCFF179WPT, ENCFF189WYV, ENCFF264DCN, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF331WKS, ENCFF376MQF, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF432ZLQ, ENCFF445BBH, ENCFF504ULZ, ENCFF521UGJ, ENCFF533JUU, ENCFF534DID, ENCFF560YXX, ENCFF590NVM, ENCFF593RAV, ENCFF623BKO, ENCFF641QXI, ENCFF683RFI, ENCFF734FHF, ENCFF755FCM, ENCFF773VFS, ENCFF775BPV, ENCFF796NHQ, ENCFF849GVQ, ENCFF878SQO, ENCFF896IIZ, ENCFF912RLS, ENCFF915FID, ENCFF013CHH, ENCFF027RRZ, ENCFF101BDM, ENCFF148XRK, ENCFF374YTS, ENCFF444YCN, ENCFF454ZUS, ENCFF467LJD, ENCFF487DYP, ENCFF588DUN, ENCFF609ZVL, ENCFF636NES, ENCFF654AEJ, ENCFF657UWH, ENCFF667SYQ, ENCFF725ATS, ENCFF728TXU, ENCFF747XPP, ENCFF775SSI, ENCFF838YLT, ENCFF840XYZ, ENCFF854KNE, ENCFF854MWX, ENCFF860XMD, ENCFF912MUD, ENCFF952BCB, ENCFF975NCY, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF027GBM, ENCFF033DWC, ENCFF041PJP, ENCFF046HWP, ENCFF047LTH, ENCFF056UGH, ENCFF057FFG, ENCFF070YMI, ENCFF116QKZ, ENCFF118YHP, ENCFF131VEF, ENCFF133KGZ, ENCFF136TYP, ENCFF163DKN, ENCFF166UTY, ENCFF170KWW, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF210BVU, ENCFF237HDL, ENCFF258WLS, ENCFF275HRX, ENCFF291SCS, ENCFF306OWL, ENCFF315OFF, ENCFF332IRR, ENCFF341YZB, ENCFF343MIX, ENCFF346HDC, ENCFF352KGC, ENCFF378TYU, ENCFF390AUP, ENCFF406NLL, ENCFF408FFP, ENCFF411KCB, ENCFF454DOT, ENCFF476JSK, ENCFF478YRJ, ENCFF505WKA, ENCFF536ZVF, ENCFF543PXT, ENCFF576EOD, ENCFF578PSU, ENCFF598LJF, ENCFF606XHA, ENCFF609WRW, ENCFF611OFH, ENCFF615ULR, ENCFF627XGF, ENCFF713JXV, ENCFF741PLM, ENCFF747VYT, ENCFF749XRU, ENCFF765UBL, ENCFF769FVU, ENCFF806XNV, ENCFF834TQY, ENCFF855UFX, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF872SFD, ENCFF898CAY, ENCFF900AIQ, ENCFF903KDM, ENCFF921PGH, ENCFF934VFW, ENCFF938XTE, ENCFF955YCX, ENCFF958BIE, ENCFF959CWA, ENCFF970LRH, ENCFF008XVO, ENCFF160TQC, ENCFF260KJY, ENCFF342GAL, ENCFF361MLD, ENCFF446LMP, ENCFF477YHR, ENCFF481CFU, ENCFF582WGH, DRR091696 chr17 28546284 28546287 + Predicted LTR|ERVL|MT2B ENSMUSG00000037805.16, Rpl10a DRR091690, DRR091691, DRR091695, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697203, SRR11428469, SRR15198219, SRR15198222, SRR15198228, SRR2040601, SRR2927113, SRR9080662, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr17 28643311 28643312 - Predicted DNA|hAT-Charlie|MER5B ENSMUSG00000024222.18, Fkbp5 SRR2089636, SRR2089647, SRR2089651 chr17 28665474 28665475 + Annotated LINE|L1|L1MB4 ENSMUSG00000117084.2, Gm22146 ENSMUST00000232983.2 chr17 28907672 28907673 - Predicted SINE|B4|ID_B1 ENSMUSG00000036196.17, Slc26a8 SRR2089603, SRR2089609, SRR2089620, SRR2089623, SRR2089632, SRR2089635 chr17 28913277 28913278 - Predicted SINE|Alu|B1_Mm ENSMUSG00000036196.17, Slc26a8 SRR2089614, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 28919275 28919279 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000036196.17, Slc26a8 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 29478252 29478253 + Predicted SINE|Alu|B1_Mur3 ENSMUSG00000052712.18, BC004004 SRR2089603, SRR2089611, SRR2089614, SRR2089617, SRR2089629, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 29491785 29491786 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000052712.18, BC004004 SRR2089603, SRR2089604, SRR2089616, SRR2089619 chr17 29684018 29684035 + Annotated SINE|B4|RSINE1 ENSMUSG00000117427.2, Gm36199 ENSMUST00000234283.2, ENSMUST00000234440.2, ENSMUST00000235077.2, ENSMUST00000234306.2, ENSMUST00000233990.2, ENSMUST00000235076.2, ENSMUST00000234336.2, ENSMUST00000234548.2, ENSMUST00000234634.2 SRR15198218 chr17 31220919 31220920 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000054134.15, Umodl1 ENSMUST00000235827.2 chr17 31731707 31731765 - Predicted LTR|ERVL-MaLR|MLT1H-int ENSMUSG00000024037.14, Wdr4 ENSMUST00000171171.9 ENCFF001NDA, ENCFF002EZW, ENCFF002FAE, ENCFF002FAI, ENCFF059IQN, ENCFF347UAC, ENCFF348VIH, ENCFF560YXX, ENCFF705JRV, ENCFF863RVB, ENCFF896IIZ, ENCFF924VRI, ENCFF942WIP, ENCFF017LOD, ENCFF101BDM, ENCFF134HVE, ENCFF143BIC, ENCFF173IVH, ENCFF199IRM, ENCFF199ZDO, ENCFF269WEZ, ENCFF374YTS, ENCFF377LAC, ENCFF394BDJ, ENCFF510TTU, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF595WXV, ENCFF609KQB, ENCFF654AEJ, ENCFF826RUZ, ENCFF838YLT, ENCFF860XMD, ENCFF914YDJ, ENCFF945ICZ, ENCFF952BCB, ENCFF967NOO, ENCFF012HVN, ENCFF111MWQ, ENCFF118YHP, ENCFF174EGP, ENCFF254VIN, ENCFF264PYB, ENCFF308WGP, ENCFF406NLL, ENCFF484PQK, ENCFF505YPK, ENCFF814TTQ, ENCFF926IDV, ENCFF994PPZ, ENCFF008XVO, ENCFF186VNL, ENCFF197NCG, ENCFF242SVY, ENCFF302TQH, ENCFF349AIG, ENCFF499GDC, ENCFF582WGH, ENCFF667KKO, ENCFF716YKR, ENCFF749STK, ENCFF904RJF, ENCFF906OAF, ENCFF970VKL, SRR10697198 chr17 31810687 31810712 + Annotated LINE|L1|L1MD ENSMUSG00000006705.14, Pknox1 ENSMUST00000236493.2, ENSMUST00000237038.2, ENSMUST00000237748.2, ENSMUST00000235255.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142123, SRR15198220, SRR15198222, SRR15198223, SRR2040601, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178987, SRR9178992 chr17 31909398 31909399 - Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000117656.2, Gm50225 ENSMUST00000237283.2 chr17 32175963 32175964 + Predicted LTR|ERVK|MMETn-int ENSMUSG00000091548.3, Gm17572 SRR2089604, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089651 chr17 32176162 32176163 + Predicted LTR|ERVK|MMETn-int ENSMUSG00000091548.3, Gm17572 SRR2089604, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089651 chr17 32350274 32350275 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000097305.4, Gm17276 SRR2089607, SRR2089609, SRR2089611, SRR2089614, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089629, SRR2089630, SRR2089635, SRR2089638, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 32360893 32360894 + Predicted SINE|Alu|B1_Mur1 ENSMUSG00000097305.4, Gm17276 SRR2089604, SRR2089607, SRR2089610, SRR2089615, SRR2089646 chr17 32446946 32446947 + Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000116414.3, Gm4432 SRR2089604, SRR2089607, SRR2089614, SRR2089616, SRR2089617, SRR2089619, SRR2089620, SRR2089622, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089641, SRR2089643, SRR2089650 chr17 32454496 32454497 + Predicted LINE|L1|Lx9 ENSMUSG00000116414.3, Gm4432 SRR2089604, SRR2089608, SRR2089611, SRR2089617, SRR2089618, SRR2089623 chr17 32464522 32464523 + Predicted SINE|B2|B3 ENSMUSG00000116414.3, Gm4432 SRR2089603, SRR2089604, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089641, SRR2089644, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 32622878 32622879 - Predicted SINE|B4|RSINE1 ENSMUSG00000052142.16, Rasal3 ENCFF212ZXS, ENCFF305IXM, ENCFF415KCJ, ENCFF453XOG, ENCFF504ULZ, ENCFF554PUC, ENCFF641QXI, ENCFF667FDW, ENCFF705JRV, ENCFF734FHF, ENCFF823PZU, ENCFF917RNE, ENCFF951UXE, ENCFF933KQV, ENCFF004AEL, ENCFF107YGR, ENCFF131VEF, ENCFF166UTY, ENCFF242MZE, ENCFF254VIN, ENCFF255ESE, ENCFF258WLS, ENCFF260UQJ, ENCFF264PYB, ENCFF399TOF, ENCFF466RIS, ENCFF482VRF, ENCFF517EJZ, ENCFF565CON, ENCFF723QWN, ENCFF759HJA, ENCFF765AQX, ENCFF855UFX, ENCFF883APB, ENCFF906CJJ, ENCFF938CNS chr17 32643066 32643067 - Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000079563.11, Pglyrp2 ENSMUST00000237130.2 ENCFF001NDZ, ENCFF001NEC, ENCFF102BWR, ENCFF106GQS, ENCFF013HYW, ENCFF017LOD, ENCFF274ESJ, ENCFF359GCY, ENCFF532UKS, ENCFF712DGP, ENCFF933KQV, ENCFF945ICZ, ENCFF014SLC, ENCFF062GNP, ENCFF186VNL, ENCFF349AIG, ENCFF442OKF, ENCFF494ZWE, ENCFF499GDC, ENCFF574YMK, ENCFF582WGH, ENCFF671TUD, ENCFF720MPJ, ENCFF854IBU, ENCFF904RJF chr17 33031449 33031450 - Predicted LTR|ERV1|RMER5 ENSMUSG00000055202.12, Zfp811 ENCFF527XBQ, ENCFF685GDB, ENCFF758IOS, ENCFF949QCF chr17 33114446 33114447 - Annotated LTR|ERV1|MERV1_LTR ENSMUSG00000121228.1, ENSMUSG00000121228 ENSMUST00000247520.1 chr17 3326187 3326188 - Predicted SINE|B4|B4 ENSMUSG00000116874.2, Gm34035 SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228 chr17 33904759 33904762 - Predicted SINE|Alu|PB1D9 ENSMUSG00000059208.16, Hnrnpm ENCFF002EZW, ENCFF002FAG, ENCFF265LKR, ENCFF358UFZ, ENCFF379JPQ, ENCFF931HCN, ENCFF101BDM, ENCFF247QZW, ENCFF269SRJ, ENCFF326UXM, ENCFF394BDJ, ENCFF468AKL, ENCFF592GVA, ENCFF636NES, ENCFF080DNG, ENCFF121IDD, ENCFF460VXC, ENCFF899EJT, ENCFF934QGX, ENCFF953FGT, ENCFF956RCJ, ENCFF994JUO, ENCFF671TUD, ENCFF728WJB, ENCFF749STK, ENCFF932SOZ, DRR091698, SRR10697195, SRR10697203, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198228, SRR2927113, SRR5643190, SRR9080662, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 33905283 33905284 - Predicted LINE|L1|Lx8 ENSMUSG00000059208.16, Hnrnpm ENCFF106RGV, ENCFF312CZB, ENCFF401HCS, ENCFF453XOG, ENCFF522VLI, ENCFF408NBX, ENCFF728TXU, ENCFF775SSI, ENCFF133PKQ, ENCFF219PCN, ENCFF254VIN, ENCFF267VBU, ENCFF417INY, ENCFF423GTP, ENCFF543GNI, ENCFF596PMK, ENCFF613YNK, ENCFF669PMR, ENCFF781MKK, ENCFF119IHT, ENCFF670VVN, DRR091699, SRR15198225, SRR9080663 chr17 33935036 33935041 - Predicted SINE|B2|B3 ENSMUSG00000059208.16, ENSMUSG00000079557.12, Hnrnpm, Marchf2 ENCFF002DNB, ENCFF002ERW, ENCFF002FAE, ENCFF181RDS, ENCFF297BEX, ENCFF437AJW, ENCFF450WAV, ENCFF993QUE, ENCFF269WEZ, ENCFF326UXM, ENCFF642YTY, ENCFF647TTU, ENCFF704WWK, ENCFF923VUD, ENCFF933KQV, ENCFF177SGB, ENCFF346HDC, ENCFF574YMK, ENCFF626KIV, DRR091691, SRR9178991 chr17 33979978 33979979 - Predicted SINE|Alu|B1F2 ENSMUSG00000077450.14, Rab11b ENCFF114PSQ, ENCFF415KCJ, ENCFF710DAI, ENCFF771LLL, ENCFF052RNG, ENCFF103SQR, ENCFF118YHP, ENCFF163BDT, ENCFF194DAO, ENCFF406NLL, ENCFF429ZEH, ENCFF454DOT, ENCFF620FXM, ENCFF643SBQ, ENCFF655CUI, ENCFF949QCF, ENCFF986DZE, ENCFF260KJY, ENCFF494ZWE, SRR13142121 chr17 34107260 34107261 - Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000079553.12, Kifc1 ENCFF002FAI, SRR15198222, SRR15198224, SRR15198226, SRR15198228 chr17 34404166 34404167 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000037321.18, Tap1 ENCFF639RWJ, ENCFF019PWU, ENCFF089SWU, ENCFF108JLQ, ENCFF197JAP, ENCFF240OIM, ENCFF247VEN, ENCFF310BWG, ENCFF331YYO, ENCFF529YFS, ENCFF657NUT, ENCFF706BUS chr17 34426680 34426681 + Annotated SINE|B4|B4A ENSMUSG00000024339.13, Tap2 ENSMUST00000145528.2 ENCFF023RRS chr17 34804611 34804613 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000015468.15, Notch4 DRR091688, DRR091689, DRR091694, SRR10697195, SRR10697200, SRR10697202, SRR11428467, SRR15198225, SRR2927113, SRR9080662, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178984, SRR9178986, SRR9178989, SRR9178992 chr17 34808142 34808249 + Predicted LTR|ERVL|RMER10B ENSMUSG00000034673.15, ENSMUSG00000034786.18, Pbx2, Gpsm3 ENCFF064PBF, ENCFF075MGH, ENCFF076CCZ, ENCFF107XGE, ENCFF114PSQ, ENCFF138QRF, ENCFF168WHQ, ENCFF221JIC, ENCFF251TMY, ENCFF307VAF, ENCFF308LTO, ENCFF312CZB, ENCFF313ERY, ENCFF344LNZ, ENCFF352VWM, ENCFF367BBB, ENCFF379JPQ, ENCFF415KCJ, ENCFF489VZI, ENCFF524EDD, ENCFF544BEF, ENCFF554PUC, ENCFF560YXX, ENCFF581WWO, ENCFF605IFN, ENCFF641QXI, ENCFF667FDW, ENCFF670YKO, ENCFF686EWL, ENCFF698LQF, ENCFF705JRV, ENCFF710DAI, ENCFF723KAG, ENCFF734FHF, ENCFF745HSV, ENCFF780TUN, ENCFF783MLO, ENCFF787LWL, ENCFF793CWJ, ENCFF849GVQ, ENCFF868XLZ, ENCFF876MJS, ENCFF881TID, ENCFF881UBL, ENCFF907HVO, ENCFF917RNE, ENCFF924VRI, ENCFF951MOU, ENCFF951UXE, ENCFF972IVS, ENCFF394BDJ, ENCFF455DHP, ENCFF632LPV, ENCFF923VUD, ENCFF012KPC, ENCFF047LTH, ENCFF052RNG, ENCFF066MTU, ENCFF077CYB, ENCFF082OML, ENCFF117ZMM, ENCFF124SSE, ENCFF136TYP, ENCFF141YUD, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF151XBP, ENCFF155GUC, ENCFF166UTY, ENCFF177LXI, ENCFF222MKT, ENCFF255ESE, ENCFF275TCB, ENCFF285NFL, ENCFF306FQJ, ENCFF307OHZ, ENCFF357AGP, ENCFF397ZQU, ENCFF399TOF, ENCFF404HLB, ENCFF406NLL, ENCFF409ABB, ENCFF420RGI, ENCFF421DHQ, ENCFF422CQE, ENCFF437QAE, ENCFF454DOT, ENCFF477MBL, ENCFF484PQK, ENCFF497KLL, ENCFF505YPK, ENCFF524FJG, ENCFF558UDY, ENCFF578MOR, ENCFF591WVP, ENCFF632HDE, ENCFF695XIY, ENCFF696TTO, ENCFF696XZL, ENCFF735BVR, ENCFF759HJA, ENCFF789AOM, ENCFF794MMU, ENCFF804EWD, ENCFF817NCH, ENCFF843WRN, ENCFF858OFI, ENCFF903KDM, ENCFF906CJJ, ENCFF917KUH, ENCFF932XKS, ENCFF998BIQ, SRR15198217, SRR15198219, SRR15198220, SRR2927113 chr17 34862926 34862930 + Predicted SINE|Alu|B1F2 ENSMUSG00000015461.16, ENSMUSG00000033739.9, Atf6b, Fkbpl DRR091691, DRR091693, SRR10697195, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 35219256 35219401 - Annotated LTR|ERV1|RLTR4_Mm ENSMUSG00000120992.1, ENSMUSG00000120992 ENSMUST00000247011.1, ENSMUST00000246793.1, ENSMUST00000246895.1, ENSMUST00000247272.1, ENSMUST00000247403.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002FAA, ENCFF002FAC, ENCFF002FAG, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048FGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF075MGH, ENCFF083BIG, ENCFF084DCW, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF106GQS, ENCFF106RGV, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF143PHU, ENCFF163LPQ, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF198RBJ, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF221NAP, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF283XKV, ENCFF284OMO, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF308LTO, ENCFF326TQL, ENCFF327MSM, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF376MQF, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF445BBH, ENCFF450WAV, ENCFF452AXW, ENCFF470MXU, ENCFF480BVV, ENCFF482MUH, ENCFF489IGD, ENCFF489VZI, ENCFF495YGN, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521IDK, ENCFF527VIY, ENCFF533JUU, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF564OKH, ENCFF564YPB, ENCFF575RUC, ENCFF585YYC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF605IFN, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF654BXL, ENCFF670CXH, ENCFF683RFI, ENCFF696TCH, ENCFF704GEB, ENCFF711WAC, ENCFF734FHF, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF783MLO, ENCFF793CWJ, ENCFF793IYH, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813ZJI, ENCFF828WIK, ENCFF836JVX, ENCFF841OXD, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF874ELO, ENCFF878SQO, ENCFF880FYC, ENCFF885AJK, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF115LWP, ENCFF170XMM, ENCFF195JLT, ENCFF234LUQ, ENCFF330FNX, ENCFF345BBC, ENCFF359GCY, ENCFF444YCN, ENCFF446FOZ, ENCFF455DHP, ENCFF587VDB, ENCFF609ZVL, ENCFF712DGP, ENCFF725ATS, ENCFF737OUQ, ENCFF838YLT, ENCFF935LAF, ENCFF945ICZ, ENCFF970VKB, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF014CMK, ENCFF015JJB, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF053NFR, ENCFF054EOL, ENCFF057FFG, ENCFF061WTN, ENCFF065ZIE, ENCFF066MTU, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF080REY, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF116DGU, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF170KWW, ENCFF174EGP, ENCFF177LXI, ENCFF178ZXW, ENCFF189BIW, ENCFF194DAO, ENCFF197OUM, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF222MKT, ENCFF235HER, ENCFF237JCE, ENCFF249LSC, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF275TCB, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF306OWL, ENCFF313IFI, ENCFF315HBU, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF334XFS, ENCFF338LFG, ENCFF341YZB, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF377OQI, ENCFF380BYT, ENCFF383AJS, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF406LFV, ENCFF406NLL, ENCFF407JTK, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF426FAF, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF454DOT, ENCFF459TYQ, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF536ZVF, ENCFF538AIM, ENCFF541HSQ, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF565YJQ, ENCFF566HCI, ENCFF576EOD, ENCFF578MOR, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF647RUH, ENCFF655CUI, ENCFF656DRS, ENCFF672WYO, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF698WQO, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF741PLM, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF765UBL, ENCFF769FVU, ENCFF780UQU, ENCFF789AOM, ENCFF801SNQ, ENCFF809QBQ, ENCFF811ZQO, ENCFF830CBI, ENCFF834TQY, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF869DVY, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF898CAY, ENCFF921PGH, ENCFF926FRX, ENCFF938XTE, ENCFF949QCF, ENCFF955YCX, ENCFF956ZKG, ENCFF960QTC, ENCFF966VVA, ENCFF983GRF, ENCFF994PPZ, ENCFF998BIQ, ENCFF999ZYF, ENCFF062GNP, ENCFF186VNL, ENCFF197NCG, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF349AIG, ENCFF442OKF, ENCFF446LMP, ENCFF499GDC, ENCFF574YMK, ENCFF653QJY, ENCFF667KKO, ENCFF716YKR, ENCFF720MPJ, ENCFF827NYZ, SRR13142118, SRR15198217, SRR2040601, SRR2927111, SRR2927113, SRR6338004 chr17 35219580 35219591 - Predicted LTR|ERV1|RLTR4_Mm ENSMUSG00000120992.1, ENSMUSG00000120992 ENCFF001NDZ, ENCFF001NEC, ENCFF001RTJ, ENCFF002ERU, ENCFF114PSQ, ENCFF482MUH, ENCFF993QUE, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF173IVH, ENCFF199ZDO, ENCFF245ZOR, ENCFF270ERO, ENCFF364LFJ, ENCFF377LAC, ENCFF521NCL, ENCFF573UIH, ENCFF581KUX, ENCFF667SYQ, ENCFF704WWK, ENCFF728TXU, ENCFF756QCA, ENCFF829RHM, ENCFF912MUD, ENCFF962FIU, ENCFF964WZW, ENCFF033DWC, ENCFF197TJB, ENCFF421DHQ, ENCFF361MLD, ENCFF517DCU, ENCFF626KIV, ENCFF728WJB, ENCFF906OAF chr17 35391543 35391777 - Annotated SINE|Alu|PB1 ENSMUSG00000024397.15, Aif1 ENSMUST00000173106.2 ENCFF001NCR, ENCFF001RTD, ENCFF001RTF, ENCFF001RTN, ENCFF002EZU, ENCFF002FAG, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF083BIG, ENCFF084PUC, ENCFF090USB, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF116MYR, ENCFF120DEX, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF147GLI, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF184EAT, ENCFF192NVI, ENCFF196PBF, ENCFF198NQV, ENCFF206EGD, ENCFF207OVG, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF234MZC, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF274WSX, ENCFF277XPM, ENCFF283XKV, ENCFF284OMO, ENCFF289WHW, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF305IXM, ENCFF308LTO, ENCFF310HPH, ENCFF313ERY, ENCFF321BMO, ENCFF330IYN, ENCFF331WKS, ENCFF332ZPO, ENCFF334RGJ, ENCFF344ILW, ENCFF345OIF, ENCFF347HAB, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF363XWU, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF401HCS, ENCFF403ORF, ENCFF415KCJ, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF460NGS, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF489VZI, ENCFF494YXM, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521UGJ, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF540XSD, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF564OKH, ENCFF585YYC, ENCFF589MBR, ENCFF590NVM, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF621PKT, ENCFF623BKO, ENCFF639RWJ, ENCFF641QXI, ENCFF645QUX, ENCFF654BXL, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF698LQF, ENCFF704GEB, ENCFF707QJV, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF764TGO, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775RSS, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF793CWJ, ENCFF793IYH, ENCFF793STU, ENCFF794FBC, ENCFF795DLS, ENCFF796NHQ, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF858CRT, ENCFF868XLZ, ENCFF876MJS, ENCFF878SQO, ENCFF881TID, ENCFF883UYA, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF910ESY, ENCFF915FID, ENCFF922KQY, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF972IVS, ENCFF985BLV, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF052WUB, ENCFF143BIC, ENCFF234LUQ, ENCFF247QZW, ENCFF271OHB, ENCFF296VFB, ENCFF394BDJ, ENCFF510TTU, ENCFF533DWD, ENCFF572TOH, ENCFF595WXV, ENCFF632LPV, ENCFF721BNO, ENCFF775SSI, ENCFF860XMD, ENCFF912MUD, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF009AON, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF014CMK, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF027GCQ, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF039DES, ENCFF041PJP, ENCFF045YRV, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF061WTN, ENCFF064VAD, ENCFF067OYG, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087XKQ, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF098AYQ, ENCFF103SQR, ENCFF106RLX, ENCFF107YGR, ENCFF116DGU, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF133PKQ, ENCFF134PXJ, ENCFF136TYP, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF170KWW, ENCFF172DMS, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF186NDY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF197TJB, ENCFF198XFF, ENCFF199AAD, ENCFF205CDI, ENCFF207HZS, ENCFF208BJY, ENCFF210BVU, ENCFF221ZQB, ENCFF222MKT, ENCFF228CMT, ENCFF229TCX, ENCFF235HER, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF256UWN, ENCFF257EYD, ENCFF258WLS, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF291SCS, ENCFF296UDD, ENCFF297PPT, ENCFF302MXO, ENCFF303BIV, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF310WDZ, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF319YFJ, ENCFF320CXH, ENCFF331YYO, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF350KYC, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF366IEQ, ENCFF369VAI, ENCFF370VOV, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF386CRY, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF394AUR, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF403CRC, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF411KCB, ENCFF411YXB, ENCFF417INY, ENCFF420REU, ENCFF420RGI, ENCFF422ZNC, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437ZSM, ENCFF439HXQ, ENCFF453MPR, ENCFF454DOT, ENCFF458EUS, ENCFF464KYQ, ENCFF468RDR, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF478BEL, ENCFF478MHH, ENCFF479WHZ, ENCFF482VRF, ENCFF483KXD, ENCFF484PQK, ENCFF487OHM, ENCFF490ULA, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF505PJK, ENCFF512XKX, ENCFF513BRJ, ENCFF516QKR, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF527XBQ, ENCFF529LEZ, ENCFF529YFS, ENCFF530DUT, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF541HSQ, ENCFF543GNI, ENCFF543PXT, ENCFF548JDU, ENCFF549IDH, ENCFF552LXG, ENCFF557JPW, ENCFF558UDY, ENCFF559QXN, ENCFF561CZI, ENCFF565DII, ENCFF566HCI, ENCFF569ELL, ENCFF572SQL, ENCFF573WSG, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF584ZUK, ENCFF594GIP, ENCFF595NMM, ENCFF598PMW, ENCFF598WAL, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF611QZE, ENCFF612KDP, ENCFF613SEJ, ENCFF613YNK, ENCFF615ULR, ENCFF618SIR, ENCFF627XGF, ENCFF633QXI, ENCFF636SOT, ENCFF637CVI, ENCFF637GVH, ENCFF637PIP, ENCFF640RWH, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF647RUH, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF663SPA, ENCFF667RGF, ENCFF669PMR, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF673SLO, ENCFF680OWA, ENCFF683WFA, ENCFF687GPO, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF695XIY, ENCFF696TTO, ENCFF698WQO, ENCFF700IPC, ENCFF706BUS, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF753HNF, ENCFF754VQW, ENCFF755REI, ENCFF756QJD, ENCFF758BKM, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF772QLP, ENCFF775OZV, ENCFF780UQU, ENCFF782CNW, ENCFF789AOM, ENCFF790WIY, ENCFF794MMU, ENCFF801SNQ, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF814TTQ, ENCFF817HZQ, ENCFF817NCH, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF825JNK, ENCFF829HAB, ENCFF830CBI, ENCFF832FTK, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF858OFI, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF883APB, ENCFF885ZAO, ENCFF886UAF, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF901KUE, ENCFF903KDM, ENCFF906CJJ, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916JWW, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF932XKS, ENCFF934VFW, ENCFF935ZEM, ENCFF936LNA, ENCFF938XTE, ENCFF939QLN, ENCFF939UBM, ENCFF949QCF, ENCFF951GZB, ENCFF951PCM, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF119IHT, ENCFF178HDG, ENCFF477YHR, ENCFF499CDP, ENCFF932SOZ, SRR3178203, SRR3178205, SRR3178206, SRR6904684, SRR6904685 chr17 36353581 36353667 - Annotated LTR|ERVK|RLTR16C_MM ENSMUSG00000056116.19, H2-T22 ENSMUST00000058801.15, ENSMUST00000080015.12, ENSMUST00000077960.7, NM_001347382.1, NM_010397.5, NM_001359756.1, NM_001359754.1, NM_001359755.1 ENCFF001NCR, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTJ, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF082HKQ, ENCFF083BIG, ENCFF084PUC, ENCFF086ZMV, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF234MZC, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF327MSM, ENCFF331WKS, ENCFF332ZPO, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF363XWU, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF400XLQ, ENCFF401HCS, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF460NGS, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521UGJ, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533NLR, ENCFF540XSD, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF570GTP, ENCFF570KYE, ENCFF581WWO, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF654BXL, ENCFF667FDW, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775RSS, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF787LWL, ENCFF793CWJ, ENCFF793STU, ENCFF794FBC, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF868XLZ, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF907HVO, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF951UXE, ENCFF962LFN, ENCFF970JWC, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF143BIC, ENCFF170XMM, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF236TUH, ENCFF251WZA, ENCFF269WEZ, ENCFF274ESJ, ENCFF284AEN, ENCFF304DLW, ENCFF315OOH, ENCFF326UXM, ENCFF335ZSA, ENCFF339MSB, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF390NKP, ENCFF394BDJ, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF487DYP, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF804UQS, ENCFF808PVJ, ENCFF818BAS, ENCFF826RUZ, ENCFF834VIK, ENCFF838YLT, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF943XKB, ENCFF952BCB, ENCFF964WZW, ENCFF967NOO, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF009AON, ENCFF009AVK, ENCFF012KPC, ENCFF013SNI, ENCFF014CMK, ENCFF015JJB, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF028XDY, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF039DES, ENCFF041PJP, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF061WTN, ENCFF064VAD, ENCFF065ZIE, ENCFF066MTU, ENCFF066UDR, ENCFF067OYG, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077YZF, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087XKQ, ENCFF088PZI, ENCFF088SVK, ENCFF094RHV, ENCFF098AYQ, ENCFF103SQR, ENCFF106RLX, ENCFF107YGR, ENCFF116DGU, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF134VWD, ENCFF136TYP, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF151XBP, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF170KWW, ENCFF172DMS, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF185TRT, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197OUM, ENCFF197TJB, ENCFF198XFF, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF207RVA, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237HDL, ENCFF239RQP, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF257EYD, ENCFF258WLS, ENCFF260UQJ, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF275HRX, ENCFF275TCB, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF302MXO, ENCFF303BIV, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF310WDZ, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF347EUO, ENCFF348RRM, ENCFF350KYC, ENCFF350PHR, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF366IEQ, ENCFF369VAI, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF407JTK, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF411YXB, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF439HXQ, ENCFF440IAL, ENCFF443URE, ENCFF453MPR, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF464KYQ, ENCFF468RDR, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF479WHZ, ENCFF482VRF, ENCFF483KXD, ENCFF485GFE, ENCFF486BJT, ENCFF487OHM, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF512XKX, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF522KWW, ENCFF524FJG, ENCFF524PAV, ENCFF529LEZ, ENCFF530DUT, ENCFF531JWM, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF538ZTW, ENCFF541HSQ, ENCFF543GNI, ENCFF548HOL, ENCFF548JDU, ENCFF549KAB, ENCFF552KEA, ENCFF557JPW, ENCFF558UDY, ENCFF559QXN, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF566HCI, ENCFF569ELL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF584ZUK, ENCFF587HBC, ENCFF591WVP, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF597BNT, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF611QZE, ENCFF612KDP, ENCFF613SEJ, ENCFF615ULR, ENCFF618PVF, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF661UPO, ENCFF663SPA, ENCFF669PMR, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF678CRA, ENCFF680OWA, ENCFF680WIN, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF696VQM, ENCFF698WQO, ENCFF700IPC, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF753HNF, ENCFF755REI, ENCFF756QJD, ENCFF758IOS, ENCFF759HJA, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF779MMO, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF789AOM, ENCFF790WIY, ENCFF791ZDR, ENCFF794MMU, ENCFF796TQV, ENCFF801SNQ, ENCFF804EWD, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF819JGD, ENCFF820JMO, ENCFF825JNK, ENCFF829HAB, ENCFF830CBI, ENCFF832FTK, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF854LJN, ENCFF855UFX, ENCFF858OFI, ENCFF860SGX, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF883APB, ENCFF885ZAO, ENCFF886UAF, ENCFF896XAZ, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF901KUE, ENCFF903KDM, ENCFF907KCF, ENCFF908MGO, ENCFF917KUH, ENCFF921PGH, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF932XKS, ENCFF934VFW, ENCFF936DQW, ENCFF936LNA, ENCFF938XTE, ENCFF939QLN, ENCFF946LMX, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF951PCM, ENCFF952EQQ, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF974XWJ, ENCFF983GRF, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF014SLC, ENCFF075EMK, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF260KJY, ENCFF269AST, ENCFF319SDE, ENCFF342GAL, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF494ZWE, ENCFF499GDC, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF582WGH, ENCFF592WZB, ENCFF667KKO, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF720MPJ, ENCFF728WJB, ENCFF733LFV, ENCFF783KGQ, ENCFF827NYZ, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF970VKL, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr17 36429096 36429106 - Predicted DNA|hAT-Charlie|URR1A ENSMUSG00000079491.11, H2-T10 ENCFF001NDZ, ENCFF107XGE, ENCFF138TOM, ENCFF727WWV, ENCFF962LFN, ENCFF039DES, ENCFF064VAD, ENCFF068CQU, ENCFF082OML, ENCFF185TRT, ENCFF277JGD, ENCFF286GUQ, ENCFF549KAB, ENCFF565CON, ENCFF565DII, ENCFF597BNT, ENCFF711XWR, ENCFF926IDV, ENCFF996WVL chr17 36432226 36432227 - Predicted LTR|ERVK|RLTR16C_MM ENSMUSG00000079491.11, H2-T10 ENCFF002DNB, ENCFF002ERU, ENCFF002ERW, ENCFF022FSI, ENCFF043JGD, ENCFF106RGV, ENCFF107XGE, ENCFF116MYR, ENCFF120DEX, ENCFF210BCB, ENCFF227OTT, ENCFF262URV, ENCFF283XKV, ENCFF307VAF, ENCFF326TQL, ENCFF347HAB, ENCFF363CYZ, ENCFF372GOY, ENCFF376MQF, ENCFF426QFT, ENCFF450WAV, ENCFF514BEA, ENCFF522VLI, ENCFF533CLY, ENCFF533NLR, ENCFF554PUC, ENCFF590NVM, ENCFF639RWJ, ENCFF641QXI, ENCFF711WAC, ENCFF755FCM, ENCFF773VFS, ENCFF793CWJ, ENCFF793STU, ENCFF813ZJI, ENCFF874ELO, ENCFF886XAI, ENCFF888HEF, ENCFF933UPG, ENCFF951UXE, ENCFF962LFN, ENCFF993QUE, ENCFF013HYW, ENCFF017LOD, ENCFF101BDM, ENCFF134HVE, ENCFF173IVH, ENCFF236TUH, ENCFF247QZW, ENCFF270ERO, ENCFF274ESJ, ENCFF315OOH, ENCFF326UXM, ENCFF348FTH, ENCFF359GCY, ENCFF377UGQ, ENCFF394BDJ, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF484HRX, ENCFF510LAE, ENCFF510TTU, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF588DUN, ENCFF592GVA, ENCFF596QWT, ENCFF632LPV, ENCFF636NES, ENCFF643XFK, ENCFF651SDJ, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF728TXU, ENCFF737OUQ, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF804UQS, ENCFF818BAS, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF923VUD, ENCFF933KQV, ENCFF933MOZ, ENCFF945ICZ, ENCFF967NOO, ENCFF975NCY, ENCFF978EQI, ENCFF024CUG, ENCFF034WGV, ENCFF054EOL, ENCFF082BJV, ENCFF124SSE, ENCFF133KGZ, ENCFF143RTP, ENCFF149BQJ, ENCFF150HVU, ENCFF157IFW, ENCFF166UTY, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF203EWG, ENCFF210BVU, ENCFF268ZHE, ENCFF275HRX, ENCFF359DNK, ENCFF378TYU, ENCFF404HLB, ENCFF406NLL, ENCFF411KCB, ENCFF424GQM, ENCFF459TYQ, ENCFF482VRF, ENCFF483KXD, ENCFF536ZVF, ENCFF552KEA, ENCFF563FUC, ENCFF576EOD, ENCFF598LJF, ENCFF611OFH, ENCFF615ULR, ENCFF620FXM, ENCFF627XGF, ENCFF644GYU, ENCFF691DJE, ENCFF726YTS, ENCFF741PLM, ENCFF750IZJ, ENCFF753HNF, ENCFF801SNQ, ENCFF811ZQO, ENCFF834TQY, ENCFF840DKD, ENCFF863LMG, ENCFF877VSZ, ENCFF926IDV, ENCFF948YKH, ENCFF970WCD, ENCFF062GNP, ENCFF186VNL, ENCFF199IWW, ENCFF260KJY, ENCFF302TQH, ENCFF319SDE, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF481CFU, ENCFF494ZWE, ENCFF499GDC, ENCFF555BQD, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF653QJY, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF733LFV, ENCFF827NYZ, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF970VKL chr17 36432291 36432378 - Annotated LTR|ERVK|RLTR16C_MM ENSMUSG00000079491.11, H2-T10 ENSMUST00000174625.8, ENSMUST00000174382.8, NR_046286.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DNB, ENCFF002ERU, ENCFF002ERW, ENCFF022FSI, ENCFF043JGD, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF075MGH, ENCFF084PUC, ENCFF091WMS, ENCFF106RGV, ENCFF107XGE, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF125HRQ, ENCFF126HTW, ENCFF138QRF, ENCFF162UVS, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF196PBF, ENCFF205GJI, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221NAP, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF262URV, ENCFF264DCN, ENCFF283XKV, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF326TQL, ENCFF331WKS, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF352VWM, ENCFF363CYZ, ENCFF372GOY, ENCFF376MQF, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF450WAV, ENCFF478FDA, ENCFF480BVV, ENCFF514BEA, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF527VIY, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF552NWL, ENCFF554PUC, ENCFF564YPB, ENCFF570GTP, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF698LQF, ENCFF704GEB, ENCFF711WAC, ENCFF734FHF, ENCFF755FCM, ENCFF761RKP, ENCFF773VFS, ENCFF775BPV, ENCFF782JNB, ENCFF793CWJ, ENCFF793STU, ENCFF795DLS, ENCFF802GAN, ENCFF808XFI, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF865WQE, ENCFF874ELO, ENCFF880FYC, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF915FID, ENCFF922KQY, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF935XRF, ENCFF937GBW, ENCFF951MOU, ENCFF951UXE, ENCFF962LFN, ENCFF972IVS, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF084CWD, ENCFF101BDM, ENCFF134HVE, ENCFF143BIC, ENCFF173IVH, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF270ERO, ENCFF274ESJ, ENCFF315OOH, ENCFF326UXM, ENCFF339MSB, ENCFF348FTH, ENCFF359GCY, ENCFF377UGQ, ENCFF394BDJ, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF484HRX, ENCFF510LAE, ENCFF510TTU, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF588DUN, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF608LAL, ENCFF636NES, ENCFF643XFK, ENCFF651SDJ, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF712DGP, ENCFF728TXU, ENCFF737OUQ, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF804UQS, ENCFF818BAS, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854MWX, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF923VUD, ENCFF933KQV, ENCFF933MOZ, ENCFF943XKB, ENCFF945ICZ, ENCFF967NOO, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF006JHA, ENCFF024CUG, ENCFF033DWC, ENCFF034WGV, ENCFF049SEE, ENCFF054EOL, ENCFF061WTN, ENCFF065ZIE, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF082BJV, ENCFF083IRL, ENCFF087IUJ, ENCFF118YHP, ENCFF124SSE, ENCFF131VEF, ENCFF133KGZ, ENCFF136TYP, ENCFF140WZW, ENCFF143RTP, ENCFF149BQJ, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF166UTY, ENCFF170KWW, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF199AAD, ENCFF203EWG, ENCFF210BVU, ENCFF222MKT, ENCFF235HER, ENCFF249LSC, ENCFF258WLS, ENCFF260UQJ, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF277JGD, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF297PPT, ENCFF299ENO, ENCFF302MXO, ENCFF313IFI, ENCFF315HBU, ENCFF316EEH, ENCFF332IRR, ENCFF338LFG, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF357AGP, ENCFF359DNK, ENCFF369VAI, ENCFF378TYU, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF411KCB, ENCFF420RGI, ENCFF424GQM, ENCFF429TQT, ENCFF437QAE, ENCFF454DOT, ENCFF459TYQ, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF490ULA, ENCFF492HRC, ENCFF497KLL, ENCFF505PJK, ENCFF518TUP, ENCFF524PAV, ENCFF536ZVF, ENCFF538AIM, ENCFF548HOL, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF576EOD, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF637PIP, ENCFF644GYU, ENCFF647RUH, ENCFF655CUI, ENCFF656DRS, ENCFF680WIN, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF705CES, ENCFF707HQI, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF726YTS, ENCFF727JTZ, ENCFF737VKP, ENCFF741PLM, ENCFF743NNG, ENCFF747VYT, ENCFF750IZJ, ENCFF751QWY, ENCFF753HNF, ENCFF765AQX, ENCFF765UBL, ENCFF780UQU, ENCFF789AOM, ENCFF801SNQ, ENCFF806MTS, ENCFF809QBQ, ENCFF811ZQO, ENCFF834TQY, ENCFF840DKD, ENCFF847IGW, ENCFF858OFI, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF877SON, ENCFF877VSZ, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF932XKS, ENCFF948YKH, ENCFF956ZKG, ENCFF960QTC, ENCFF970WCD, ENCFF986DZE, ENCFF998BIQ, ENCFF999ZYF, ENCFF062GNP, ENCFF186VNL, ENCFF199IWW, ENCFF242SVY, ENCFF260KJY, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF442OKF, ENCFF481CFU, ENCFF494ZWE, ENCFF499GDC, ENCFF555BQD, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF653QJY, ENCFF667KKO, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF827NYZ, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF970VKL chr17 36454319 36454369 - Predicted LTR|ERVL|MLT2F ENSMUSG00000073980.6, ENSMUSG00000092243.9, ENSMUSG00000092366.3, ENSMUSG00000121510.1, Gm9574, Gm7030, Gm17782, ENSMUSG00000121510 ENCFF001NCP, ENCFF001NCR, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF033ZUH, ENCFF251WZA, ENCFF269WEZ, ENCFF274ESJ, ENCFF359GCY, ENCFF455DHP, ENCFF581KUX, ENCFF670FEL, ENCFF712DGP, ENCFF838YLT, ENCFF868WEJ, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF933KQV, ENCFF970VKB, ENCFF062GNP, ENCFF186VNL, ENCFF477YHR, ENCFF499GDC, ENCFF574YMK, ENCFF653QJY, ENCFF671TUD, ENCFF720MPJ, ENCFF854IBU chr17 36583138 36583139 - Annotated LTR|ERVL|MT2B2 ENSMUSG00000045409.17, Trim39 ENSMUST00000172832.2 ENCFF115LWP, DRR091690, SRR10697199, SRR11428467 chr17 36583840 36583879 - Predicted LTR|ERVK|RMER17C ENSMUSG00000045409.17, Trim39 ENCFF001RTD, ENCFF002FAG, ENCFF027IIP, ENCFF289WHW, ENCFF773VFS, ENCFF005GQR, ENCFF013CHH, ENCFF027RRZ, ENCFF033ZUH, ENCFF101BDM, ENCFF195JLT, ENCFF234LUQ, ENCFF251WZA, ENCFF269WEZ, ENCFF274ESJ, ENCFF335ZSA, ENCFF345BBC, ENCFF374YTS, ENCFF408NBX, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF487DYP, ENCFF500QZK, ENCFF510TTU, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF609ZVL, ENCFF636NES, ENCFF647TTU, ENCFF651SDJ, ENCFF657FNE, ENCFF694NRG, ENCFF712DGP, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF744OEI, ENCFF775SSI, ENCFF854MWX, ENCFF914YDJ, ENCFF923VUD, ENCFF935LAF, ENCFF964WZW, ENCFF970VKB, ENCFF194DAO, ENCFF222MKT, ENCFF008XVO, ENCFF062GNP, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF302TQH, ENCFF349AIG, ENCFF399XUL, ENCFF442OKF, ENCFF477YHR, ENCFF499GDC, ENCFF510AYI, ENCFF653QJY, ENCFF670VVN, ENCFF671TUD, ENCFF716YKR, ENCFF720MPJ, ENCFF847LGC, ENCFF854IBU, ENCFF904RJF, ENCFF970VKL, DRR091693, DRR091694, DRR091698, SRR10697195, SRR10697196, SRR10697201, SRR10697202, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198226, SRR15198228, SRR9080665, SRR9080666 chr17 37165177 37165178 + Predicted LINE|L2|L2a ENSMUSG00000024457.17, Trim26 ENCFF002EZY, ENCFF002FAA, ENCFF002FAE, ENCFF470MXU, ENCFF013CHH, ENCFF326UXM, ENCFF355AMN, ENCFF467LJD, ENCFF087IUJ, ENCFF186NDY, ENCFF619SKV, SRR2927112 chr17 37166181 37166211 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000024457.17, Trim26 ENCFF002EZW, ENCFF086ZMV, ENCFF151QHP, ENCFF207DLW, ENCFF262WAE, ENCFF264RIV, ENCFF313ERY, ENCFF330IYN, ENCFF348VIH, ENCFF460NGS, ENCFF589MBR, ENCFF645QUX, ENCFF647ICR, ENCFF667FDW, ENCFF906FNQ, ENCFF910ESY, ENCFF931HCN, ENCFF960LQP, ENCFF012HVN, ENCFF039PJR, ENCFF067OYG, ENCFF087OKI, ENCFF098TCZ, ENCFF255XDN, ENCFF256UWN, ENCFF261EQP, ENCFF305GPD, ENCFF335UNU, ENCFF343MZH, ENCFF366IEQ, ENCFF386HCR, ENCFF386XTQ, ENCFF439BEV, ENCFF505YPK, ENCFF513BRJ, ENCFF516QKR, ENCFF522KWW, ENCFF533ZIO, ENCFF549IDH, ENCFF549KAB, ENCFF557JPW, ENCFF584ZUK, ENCFF603QSQ, ENCFF618PVF, ENCFF632HDE, ENCFF673ZDG, ENCFF756QJD, ENCFF759WDO, ENCFF772QLP, ENCFF781XUM, ENCFF803ZUN, ENCFF825JNK, ENCFF829WND, ENCFF863ENS, ENCFF881YOK, ENCFF899EJT, ENCFF904KCQ, ENCFF930JCE, ENCFF935ZEM, ENCFF955WXI, ENCFF971DTR chr17 37314557 37314600 + Annotated LTR|LTR|LTR90A ENSMUSG00000036036.16, Zfp57 ENSMUST00000174672.2, NR_033137.1 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, DRR091691, DRR091692, DRR091695, SRR10697195, SRR10697196, SRR10697197, SRR10697201, SRR10697203, SRR11428467, SRR11428469, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198227, SRR3178204, SRR3178205, SRR6338004, SRR9080665, SRR9080666, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178988, SRR9178990 chr17 37880336 37880377 - Annotated LINE|L1|Lx5 ENSMUSG00000051611.10, Or14j9 ENSMUST00000208832.2, ENSMUST00000174798.3, NM_001013575.5 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 38890421 38890422 + Predicted LINE|L1|Lx8 ENSMUSG00000092244.4, ENSMUSG00000117214.2, Esp34, Gm49813 SRR2089616, SRR2089623, SRR2089629, SRR2089631 chr17 39303639 39303640 - Predicted LINE|L1|Lx3_Mus ENSMUSG00000096697.2, ENSMUSG00000117021.2, Esp23, Gm49826 SRR2089629, SRR2089637, SRR2089648 chr17 39347586 39347587 + Annotated LTR|ERVL|MT2_Mm ENSMUSG00000095625.3, Esp24 ENSMUST00000232955.2, NM_001256050.1 ENCFF001NDA, ENCFF001NDD chr17 39440594 39440610 - Predicted LTR|ERVK|IAPLTR3 ENSMUSG00000117240.2, Gm49827 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198225, SRR15198226, SRR2927111, SRR2927113, SRR9080665 chr17 40153883 40153889 + Predicted LTR|ERVL-MaLR|MTC-int ENSMUSG00000119584.1, Rn18s-rs5 ENCFF001NCP, ENCFF040EEJ, ENCFF147GLI, ENCFF403CRC, ENCFF951PCM, SRR15198224, SRR15198228, SRR9080665 chr17 42612945 42612946 + Predicted LINE|L1|L1Lx_III ENSMUSG00000042256.6, Ptchd4 SRR2089606, SRR2089607, SRR2089610, SRR2089621, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089650, SRR2089651 chr17 42613648 42613649 + Predicted LINE|L1|Lx8 ENSMUSG00000042256.6, Ptchd4 SRR2089605, SRR2089606, SRR2089607, SRR2089610, SRR2089621, SRR2089622, SRR2089635, SRR2089639 chr17 42774647 42774648 + Predicted SINE|B2|B3A ENSMUSG00000042256.6, Ptchd4 SRR2089615, SRR2089642, SRR2089645 chr17 43903960 43903961 + Predicted LTR|ERVK|MLTR31F_MM ENSMUSG00000023913.18, Pla2g7 SRR11428467, SRR13142119, SRR9178980, SRR9178989, SRR9178990, SRR9178991 chr17 44040256 44040257 - Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000121022.1, ENSMUSG00000121022 SRR2089615, SRR2089644, SRR2089647 chr17 44464544 44464545 - Predicted SINE|B4|RSINE1 ENSMUSG00000023961.17, Enpp4 SRR2089617, SRR2089638, SRR2089640, SRR2089650, SRR2089651 chr17 45136693 45136694 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000038954.15, Supt3 SRR2089620, SRR2089623, SRR2089629, SRR2089630, SRR2089632, SRR2089643 chr17 45458134 45458182 + Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000117044.2, Gm35097 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 46465052 46465053 - Predicted SINE|Alu|B1_Mm ENSMUSG00000034509.10, Mad2l1bp DRR091694, DRR091695, DRR091698, SRR10697195, SRR10697201, SRR10697202, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR15198217, SRR15198220, SRR15198223, SRR15198225, SRR9178989 chr17 46469224 46469225 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000023952.14, Gtpbp2 DRR091689, DRR091693, DRR091694, DRR091697, DRR091699, SRR10697197, SRR2040601 chr17 46556076 46556077 - Predicted LTR|ERVL|MT2B ENSMUSG00000067148.16, Polr1c ENCFF002DMZ, ENCFF002FAC, ENCFF575RUC, ENCFF993QUE, ENCFF334XFS chr17 4685267 4685294 + Predicted LINE|L2|L2c ENSMUSG00000116767.2, 4930517M08Rik DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697198, SRR10697199, SRR10697202, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178979, SRR9178985 chr17 47677018 47677019 + Predicted LTR|ERVL|MT2B ENSMUSG00000034729.17, Mrps10 SRR2089615, SRR2089622, SRR2089629, SRR2089634, SRR2089648, SRR2089650 chr17 49045773 49045774 - Annotated SINE|MIR|MIRb ENSMUSG00000110276.2, Gm45330 ENSMUST00000209681.2 DRR091688, DRR091693, SRR15198219, SRR15198221, SRR9178979 chr17 49101919 49101920 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000121229.1, ENSMUSG00000121229 ENSMUST00000247523.1 chr17 4939914 4939915 - Predicted Retroposon|L1-dep|RMER1B ENSMUSG00000116813.2, 4930579D07Rik SRR2089607, SRR2089618, SRR2089631, SRR2089632, SRR2089640, SRR2089641, SRR2089645, SRR2089649 chr17 49599770 49599771 + Annotated LINE|L1|Lx8 ENSMUSG00000064541.3, Gm22978 ENSMUST00000082607.3 chr17 49619385 49619386 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000117221.2, Gm17830 SRR2089606, SRR2089608, SRR2089612, SRR2089630, SRR2089641 chr17 49622067 49622068 - Predicted SINE|Alu|B1_Mm ENSMUSG00000117221.2, Gm17830 SRR2089603, SRR2089607, SRR2089614, SRR2089620, SRR2089622, SRR2089634, SRR2089635, SRR2089640, SRR2089644 chr17 49622856 49622877 - Predicted LTR|ERVL|MER21B ENSMUSG00000117198.2, ENSMUSG00000117221.2, Gm18067, Gm17830 SRR2089603, SRR2089606, SRR2089609, SRR2089611, SRR2089612, SRR2089614, SRR2089616, SRR2089618, SRR2089621, SRR2089623, SRR2089629, SRR2089631, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 50128832 50128872 - Annotated LTR|ERVK|RMER19B ENSMUSG00000090012.2, Gm16555 ENSMUST00000159971.2, NR_168028.1 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178989, SRR9178990, SRR9178992 chr17 50546189 50546237 + Annotated LTR|ERV1|RMER21B ENSMUSG00000067103.7, AY702103 ENSMUST00000180996.2, NR_131975.1 DRR091688, DRR091690, DRR091691, DRR091696, DRR091697, DRR091699, SRR10697198, SRR15198221, SRR15198222, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178991, SRR9178992 chr17 50546432 50546433 + Annotated LTR|ERV1|RMER21B ENSMUSG00000067103.7, AY702103 ENSMUST00000086914.6 chr17 50693053 50693054 + Predicted LINE|L1|L1MdV_I ENSMUSG00000038910.8, Plcl2 ENCFF234LUQ, ENCFF345BBC, ENCFF359GCY, ENCFF712DGP, ENCFF945ICZ, ENCFF014SLC, ENCFF062GNP, ENCFF260KJY, ENCFF302TQH, ENCFF499GDC, ENCFF574YMK, ENCFF854IBU chr17 56265718 56265719 + Predicted SINE|ID|ID4_v ENSMUSG00000003208.10, Yju2 ENCFF001RTN, ENCFF125HRQ, ENCFF345OIF, ENCFF443PSO, ENCFF472YPG, ENCFF495SQR, ENCFF623BKO, ENCFF841OXD, ENCFF912RLS, ENCFF970JWC, ENCFF222GPK, ENCFF335ZSA, ENCFF468AKL, ENCFF647TTU, ENCFF826RUZ, ENCFF854KNE, ENCFF943XKB, ENCFF028XDY, ENCFF046HWP, ENCFF073RJJ, ENCFF128CYW, ENCFF172DMS, ENCFF296UDD, ENCFF341YZB, ENCFF357QTB, ENCFF422ZNC, ENCFF482VRF, ENCFF584ZUK, ENCFF644EGG, ENCFF711XWR, ENCFF766UJI, ENCFF834TQY, ENCFF838BEV, ENCFF886UAF, ENCFF953WBM, ENCFF959CWA, ENCFF970LRH, ENCFF996WVL, ENCFF062GNP, ENCFF670VVN, DRR091699, SRR13142120, SRR15198222, SRR2040601, SRR2927112, SRR2927113 chr17 56265775 56265790 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000003208.10, Yju2 ENCFF001RTN, ENCFF002EZW, ENCFF076CCZ, ENCFF125HRQ, ENCFF345OIF, ENCFF443PSO, ENCFF472YPG, ENCFF478FDA, ENCFF623BKO, ENCFF670CXH, ENCFF841OXD, ENCFF912RLS, ENCFF065LOT, ENCFF173IVH, ENCFF222GPK, ENCFF335ZSA, ENCFF468AKL, ENCFF487DYP, ENCFF573UIH, ENCFF632LPV, ENCFF647TTU, ENCFF733MXU, ENCFF775SSI, ENCFF826RUZ, ENCFF854KNE, ENCFF943XKB, ENCFF046HWP, ENCFF073RJJ, ENCFF128CYW, ENCFF172DMS, ENCFF177SGB, ENCFF258WLS, ENCFF296UDD, ENCFF306FQJ, ENCFF315HBU, ENCFF341YZB, ENCFF357QTB, ENCFF422ZNC, ENCFF482VRF, ENCFF644EGG, ENCFF766UJI, ENCFF769FVU, ENCFF834TQY, ENCFF838BEV, ENCFF886UAF, ENCFF953WBM, ENCFF959CWA, ENCFF970LRH, ENCFF062GNP, ENCFF197NCG, ENCFF306ADU, ENCFF319SDE, ENCFF517DCU, DRR091697, DRR091699, SRR10697203, SRR11428470, SRR13142120, SRR15198222, SRR2040601, SRR2927112, SRR2927113 chr17 56866951 56866952 + Predicted LINE|L1|Lx7 ENSMUSG00000071054.13, Safb ENCFF195JLT, ENCFF345BBC, ENCFF712DGP, ENCFF970VKB, ENCFF720MPJ, SRR15198217 chr17 57100882 57100883 + Annotated LTR|ERVK|RLTR20A3_MM ENSMUSG00000121209.1, ENSMUSG00000121209 ENSMUST00000247457.1 chr17 58087072 58087089 + Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000038048.9, Cntnap5c SRR2089606, SRR2089609, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 5849765 5849767 + Annotated DNA|hAT-Tip100|MER63B ENSMUSG00000096965.9, 3300005D01Rik ENSMUST00000181484.2, NR_045080.1, NR_045079.1 chr17 63611162 63611169 - Predicted LTR|ERVK|RMER19B ENSMUSG00000023965.14, Fbxl17 ENCFF074HTO, ENCFF094CCP, ENCFF159OVE, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF514BEA, ENCFF796NHQ, ENCFF841OXD, ENCFF878SQO, ENCFF205CDI, ENCFF426ETE, ENCFF541HSQ, ENCFF673GRZ, ENCFF869DVY, ENCFF877VSZ, ENCFF952LUC, ENCFF994PPZ chr17 63619962 63619992 - Annotated LINE|L1|Lx9 ENSMUSG00000090565.8, 4930405O22Rik ENSMUST00000164605.8, ENSMUST00000171379.2, NR_130176.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198221, SRR15198223, SRR15198224, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 64357666 64357667 - Annotated LTR|ERVL-MaLR|ORR1D1 NR_130982.1 chr17 65624168 65624184 - Predicted LINE|L1|Lx9 ENSMUSG00000045036.16, Tmem232 ENCFF052WUB, ENCFF060JCS, ENCFF151YNV, ENCFF245ZOR, ENCFF261ZZF, ENCFF369YLA, ENCFF377LAC, ENCFF391UFN, ENCFF429BQZ, ENCFF516BTG, ENCFF519YGA, ENCFF590LNP, ENCFF596QWT, ENCFF642YTY, ENCFF643XFK, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF768ZCF, ENCFF782NPY, ENCFF803VZZ, ENCFF829RHM, ENCFF978EQI, ENCFF254YNR, ENCFF277QHC, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF705HQV, ENCFF716YKR, ENCFF728WJB, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF888IIL chr17 65947364 65947365 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000050612.7, Txndc2 SRR3178204, SRR5643192, SRR6904683, SRR6904684, SRR6904685 chr17 65949142 65949218 - Annotated LINE|L1|Lx8 ENSMUSG00000050612.7, Txndc2 ENSMUST00000050236.7, NM_001146002.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 65982064 65982117 - Predicted LINE|RTE-X|L4_B_Mam ENSMUSG00000056515.10, Rab31 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 66110856 66110857 + Predicted LINE|CR1|X6B_LINE ENSMUSG00000061950.18, Ppp4r1 ENCFF002DNB, ENCFF002FAC, ENCFF002FAI chr17 66220301 66220302 - Predicted SINE|B4|B4 ENSMUSG00000024096.18, Ralbp1 DRR091698, SRR10697199, SRR11428469, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR2040601, SRR9080662 chr17 66791041 66791042 - Annotated LTR|ERVK|RLTR9A3 ENSMUSG00000121174.1, ENSMUSG00000121174 ENSMUST00000247384.1 chr17 6717033 6717034 - Predicted LTR|ERVK|RLTR13B3 ENSMUSG00000121395.1, ENSMUSG00000121395 ENCFF001NEC, ENCFF002DNB, ENCFF002FAA, ENCFF074HTO, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF852ZDB, ENCFF041PJP, ENCFF609WDV, ENCFF707HQI, ENCFF712BKP, ENCFF867FTP, SRR11428470, SRR9178980, SRR9178991 chr17 70230983 70231025 - Annotated DNA|TcMar-Tigger|Tigger19b ENSMUSG00000117233.2, Gm36594 ENSMUST00000232745.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR9080663, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr17 71112991 71112995 - Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000117231.2, Gm41609 ENSMUST00000233559.2, NR_168098.1 ENCFF001NDD, DRR091690, SRR15198217, SRR15198219, SRR15198220, SRR15198223, SRR15198228, SRR2040601 chr17 71162025 71162026 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000047407.18, Tgif1 ENCFF075MGH, ENCFF262URV, ENCFF330LWU, ENCFF381JXP, ENCFF528CBF, ENCFF755FCM, ENCFF896IIZ, ENCFF951MOU, ENCFF004AEL, ENCFF009AON, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF108JLQ, ENCFF128CYW, ENCFF136DUH, ENCFF163GEC, ENCFF243TPB, ENCFF247VEN, ENCFF273CBP, ENCFF311MZV, ENCFF341YZB, ENCFF376PQU, ENCFF430ERW, ENCFF482VRF, ENCFF512XKX, ENCFF606XHA, ENCFF637CVI, ENCFF661UPO, ENCFF814TTQ, ENCFF886UAF, ENCFF926IDV chr17 71329844 71329845 + Predicted LTR|Gypsy|MamGypsy2-LTR ENSMUSG00000024049.16, Myom1 ENCFF002FAI, ENCFF170XMM, ENCFF270ERO, ENCFF304DLW, ENCFF484HRX, ENCFF588DUN, ENCFF604SXL, ENCFF642YTY, ENCFF643XFK, ENCFF686KMX, ENCFF756QCA, ENCFF840XYZ, ENCFF855FCX, ENCFF939IUH, ENCFF962FIU, ENCFF964WZW, ENCFF319SDE, ENCFF361MLD, ENCFF423TSB, ENCFF446LMP, ENCFF517DCU, ENCFF723MAR, ENCFF733LFV, SRR15198226, SRR15198227 chr17 71622424 71622466 + Annotated LINE|L1|Lx8 ENSMUSG00000117137.2, 4930471L23Rik ENSMUST00000233188.2, NR_045460.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643192, SRR6338004, SRR6904683, SRR6904685, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 71628503 71628504 + Predicted LTR|ERV1|RLTR1B-int ENSMUSG00000117137.2, 4930471L23Rik SRR11428468, SRR5643199, SRR6904683, SRR6904685 chr17 7307541 7307554 + Predicted LINE|L1|L1M4 ENSMUSG00000094083.3, Gm1604b SRR2089607, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr17 7307686 7307688 + Predicted LINE|L1|L1M4 ENSMUSG00000094083.3, Gm1604b SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089613, SRR2089643 chr17 7309616 7309617 + Predicted LINE|L1|Lx8 ENSMUSG00000094083.3, Gm1604b SRR2089603, SRR2089604, SRR2089605, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089613, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089637, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089646, SRR2089647 chr17 74193969 74193970 - Predicted LTR|ERVK|RLTR10 ENSMUSG00000024066.10, Xdh ENCFF064PBF, ENCFF076CCZ, ENCFF082HKQ, ENCFF117BGT, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF147GLI, ENCFF198NQV, ENCFF221JNS, ENCFF265LKR, ENCFF304MIZ, ENCFF313ERY, ENCFF322VJD, ENCFF330LWU, ENCFF348VIH, ENCFF403ORF, ENCFF432ZLQ, ENCFF460NGS, ENCFF521UGJ, ENCFF522VLI, ENCFF533CLY, ENCFF565YHF, ENCFF670YKO, ENCFF671ERF, ENCFF686EWL, ENCFF743RQJ, ENCFF745HSV, ENCFF755IDE, ENCFF764TGO, ENCFF787LWL, ENCFF823PZU, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF917RNE, ENCFF942WIP, ENCFF946AGD, ENCFF960LQP, ENCFF994BOT, ENCFF035BBA, ENCFF037LEJ, ENCFF047LTH, ENCFF052RNG, ENCFF068CQU, ENCFF077CYB, ENCFF089SWU, ENCFF108JLQ, ENCFF118PQI, ENCFF127KHN, ENCFF134PXJ, ENCFF136DUH, ENCFF143RTP, ENCFF163GEC, ENCFF166UTY, ENCFF167GWU, ENCFF194DAO, ENCFF209LBA, ENCFF223SMG, ENCFF228CMT, ENCFF240OIM, ENCFF254TFB, ENCFF256UWN, ENCFF268YSJ, ENCFF271RFU, ENCFF272WGJ, ENCFF306FQJ, ENCFF307OHZ, ENCFF346NGU, ENCFF374VAZ, ENCFF423GTP, ENCFF433QNW, ENCFF437ZSM, ENCFF443URE, ENCFF456GLS, ENCFF464KYQ, ENCFF466RIS, ENCFF470RDW, ENCFF484PQK, ENCFF507VMW, ENCFF531JWM, ENCFF533ZIO, ENCFF537DSI, ENCFF538ZTW, ENCFF548HOL, ENCFF549KAB, ENCFF559QXN, ENCFF562MVN, ENCFF572JDP, ENCFF591WVP, ENCFF613SEJ, ENCFF632HDE, ENCFF636SOT, ENCFF646GBS, ENCFF651HEM, ENCFF655CUI, ENCFF663SPA, ENCFF667RGF, ENCFF673BPE, ENCFF673SLO, ENCFF680OWA, ENCFF683WFA, ENCFF685FUZ, ENCFF694EPZ, ENCFF711XWR, ENCFF746ZCS, ENCFF749XRU, ENCFF750IZJ, ENCFF758JNE, ENCFF764AQK, ENCFF765AQX, ENCFF791ZDR, ENCFF798TFC, ENCFF814TTQ, ENCFF845NUY, ENCFF853PNO, ENCFF894COY, ENCFF901KUE, ENCFF903KDM, ENCFF908MGO, ENCFF916JWW, ENCFF927LFD, ENCFF934QGX, ENCFF938CNS, ENCFF948BDY, ENCFF955WXI, ENCFF958LRX, ENCFF974KKD, ENCFF974XWJ, ENCFF996WVL chr17 74194070 74194120 - Predicted LTR|ERVK|RLTR10 ENSMUSG00000024066.10, Xdh ENCFF027IIP, ENCFF056GXQ, ENCFF064PBF, ENCFF076CCZ, ENCFF082HKQ, ENCFF086ZMV, ENCFF117BGT, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF147GLI, ENCFF198NQV, ENCFF212JFB, ENCFF221JNS, ENCFF264RIV, ENCFF265LKR, ENCFF273CJD, ENCFF304MIZ, ENCFF313ERY, ENCFF322VJD, ENCFF330LWU, ENCFF348VIH, ENCFF401HCS, ENCFF403ORF, ENCFF432ZLQ, ENCFF453XOG, ENCFF460NGS, ENCFF489VZI, ENCFF521UGJ, ENCFF522VLI, ENCFF533CLY, ENCFF552NWL, ENCFF565YHF, ENCFF622NXP, ENCFF643VPC, ENCFF645QUX, ENCFF670YKO, ENCFF671ERF, ENCFF686EWL, ENCFF705JRV, ENCFF743RQJ, ENCFF745HSV, ENCFF755IDE, ENCFF764TGO, ENCFF764ZUI, ENCFF787LWL, ENCFF823PZU, ENCFF844KCR, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF917RNE, ENCFF931DDH, ENCFF931HCN, ENCFF942WIP, ENCFF946AGD, ENCFF960LQP, ENCFF993QUE, ENCFF994BOT, ENCFF034WGV, ENCFF035BBA, ENCFF037LEJ, ENCFF047LTH, ENCFF052RNG, ENCFF060FGD, ENCFF067OYG, ENCFF068CQU, ENCFF077CYB, ENCFF080DNG, ENCFF089SWU, ENCFF108JLQ, ENCFF117ZMM, ENCFF118PQI, ENCFF118YHP, ENCFF124SSE, ENCFF127KHN, ENCFF133PKQ, ENCFF134PXJ, ENCFF136DUH, ENCFF136TYP, ENCFF143RTP, ENCFF149JXW, ENCFF163GEC, ENCFF166UTY, ENCFF167GWU, ENCFF194DAO, ENCFF198XFF, ENCFF207HZS, ENCFF209LBA, ENCFF210BVU, ENCFF223SMG, ENCFF228CMT, ENCFF233RGQ, ENCFF237JCE, ENCFF240OIM, ENCFF254TFB, ENCFF256UWN, ENCFF260UQJ, ENCFF268YSJ, ENCFF271RFU, ENCFF272WGJ, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF307OHZ, ENCFF346NGU, ENCFF353SEU, ENCFF366CSN, ENCFF374VAZ, ENCFF378TYU, ENCFF394AUR, ENCFF397ZQU, ENCFF399YLV, ENCFF421DHQ, ENCFF423GTP, ENCFF426ZCK, ENCFF433QNW, ENCFF437ZSM, ENCFF443URE, ENCFF453MPR, ENCFF456GLS, ENCFF464KYQ, ENCFF466RIS, ENCFF470RDW, ENCFF484PQK, ENCFF497NJW, ENCFF504PGI, ENCFF507VMW, ENCFF507WIK, ENCFF524PAV, ENCFF529YFS, ENCFF531JWM, ENCFF533ZIO, ENCFF537DSI, ENCFF538ZTW, ENCFF543GNI, ENCFF548HOL, ENCFF549KAB, ENCFF558UDY, ENCFF559QXN, ENCFF562MVN, ENCFF572JDP, ENCFF572SQL, ENCFF578YPJ, ENCFF584ZUK, ENCFF591WVP, ENCFF596PMK, ENCFF597BNT, ENCFF613SEJ, ENCFF632HDE, ENCFF635XED, ENCFF636SOT, ENCFF640RWH, ENCFF646GBS, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF658NHH, ENCFF663SPA, ENCFF667RGF, ENCFF673BPE, ENCFF673SLO, ENCFF680OWA, ENCFF681EEO, ENCFF683WFA, ENCFF685FUZ, ENCFF694EPZ, ENCFF696QTS, ENCFF706BUS, ENCFF711XWR, ENCFF740WXS, ENCFF746ZCS, ENCFF749XRU, ENCFF750IZJ, ENCFF758JNE, ENCFF764AQK, ENCFF765AQX, ENCFF772QLP, ENCFF789AOM, ENCFF791ZDR, ENCFF798TFC, ENCFF804EWD, ENCFF814TTQ, ENCFF818ZJQ, ENCFF821HAZ, ENCFF829WND, ENCFF845NUY, ENCFF853PNO, ENCFF854LJN, ENCFF856UMI, ENCFF866IHG, ENCFF894COY, ENCFF901KUE, ENCFF903KDM, ENCFF908MGO, ENCFF916JWW, ENCFF926IDV, ENCFF927LFD, ENCFF934QGX, ENCFF937KFC, ENCFF938CNS, ENCFF948BDY, ENCFF955WXI, ENCFF958LRX, ENCFF970PLY, ENCFF971DTR, ENCFF974KKD, ENCFF974XWJ, ENCFF996WVL chr17 74924165 74924168 - Predicted LINE|L1|Lx3C ENSMUSG00000097546.2, Gm26749 DRR091689, DRR091692, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697197, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR15198222, SRR15198224, SRR15198226, SRR15198227, SRR2040601, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178985 chr17 75126855 75126935 - Annotated LTR|ERVK|RMER19C ENSMUSG00000117444.3, Gm50020 ENSMUST00000247160.1, ENSMUST00000234963.3 ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF051JSS, ENCFF051PTY, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF075MGH, ENCFF091WMS, ENCFF094CCP, ENCFF104LLO, ENCFF115KZV, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF138QRF, ENCFF139MHN, ENCFF142CUS, ENCFF163LPQ, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF274WSX, ENCFF279BVM, ENCFF284OMO, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347UAC, ENCFF352VWM, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF470MXU, ENCFF478FDA, ENCFF482MUH, ENCFF504ULZ, ENCFF514BEA, ENCFF533JUU, ENCFF534DID, ENCFF552NWL, ENCFF564YPB, ENCFF581WWO, ENCFF585YYC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF621PKT, ENCFF643VPC, ENCFF670CXH, ENCFF670YKO, ENCFF711WAC, ENCFF723KAG, ENCFF755FCM, ENCFF761RKP, ENCFF764EJV, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793STU, ENCFF802GAN, ENCFF808XFI, ENCFF841OXD, ENCFF852ZDB, ENCFF865WQE, ENCFF878SQO, ENCFF880FYC, ENCFF883UYA, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF931PFF, ENCFF933UPG, ENCFF937GBW, ENCFF942WIP, ENCFF951MOU, ENCFF989HJD, ENCFF991TPB, ENCFF002SZY, ENCFF004AEL, ENCFF014CMK, ENCFF015JJB, ENCFF023TPS, ENCFF033DWC, ENCFF034WGV, ENCFF037IZV, ENCFF049SEE, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF065ZIE, ENCFF070YMI, ENCFF073RJJ, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF116QKZ, ENCFF118YHP, ENCFF126WDH, ENCFF128CYW, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF194DAO, ENCFF197TJB, ENCFF235HER, ENCFF237JCE, ENCFF255ESE, ENCFF258WLS, ENCFF260UQJ, ENCFF264PYB, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF279EVY, ENCFF291SCS, ENCFF299ENO, ENCFF302MXO, ENCFF313IFI, ENCFF315OFF, ENCFF316EEH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF378TYU, ENCFF380LXU, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397ZQU, ENCFF406LFV, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF426ETE, ENCFF429TQT, ENCFF430ERW, ENCFF458EUS, ENCFF476JSK, ENCFF482VRF, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF505PJK, ENCFF505WKA, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF581RIR, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF637PIP, ENCFF640RWH, ENCFF644GYU, ENCFF672WYO, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF698WQO, ENCFF707HQI, ENCFF712BKP, ENCFF716NXU, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF743NNG, ENCFF747VYT, ENCFF751QWY, ENCFF765UBL, ENCFF766UJI, ENCFF801SNQ, ENCFF809QBQ, ENCFF811ZQO, ENCFF819JGD, ENCFF834TQY, ENCFF838BEV, ENCFF845NUY, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF926FRX, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF956ZKG, ENCFF970LRH, ENCFF983GRF, ENCFF994PPZ, ENCFF999ZYF chr17 75257278 75257297 - Annotated Retroposon|L1-dep|RMER1A ENSMUSG00000117560.2, Gm31759 ENSMUST00000234897.2, NR_168504.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR5643190, SRR6338004, SRR6904683, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr17 75257701 75257702 - Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000117560.2, Gm31759 SRR10697195, SRR10697202, SRR15198217, SRR15198219, SRR15198220, SRR15198223 chr17 75568773 75568774 + Predicted SINE|Alu|B1F ENSMUSG00000001870.17, Ltbp1 SRR2089604, SRR2089637, SRR2089638, SRR2089639, SRR2089640 chr17 79200160 79200161 - Predicted LTR|ERVL|RMER15 ENSMUSG00000024079.5, Eif2ak2 ENCFF114PSQ, ENCFF415KCJ, ENCFF621PKT, ENCFF667FDW, ENCFF773VFS, ENCFF896IIZ, ENCFF505YPK, ENCFF765AQX, ENCFF849PKR chr17 79922065 79922066 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000036368.9, Rmdn2 ENCFF199IRM, ENCFF251WZA, ENCFF271OHB, ENCFF355AMN, ENCFF374YTS, ENCFF510TTU, ENCFF521NCL, ENCFF533DWD, ENCFF595WXV, ENCFF609KQB, ENCFF721BNO, ENCFF725ATS, ENCFF775SSI, ENCFF698WQO, ENCFF986DZE, ENCFF510AYI, ENCFF847LGC, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR2927112 chr17 80119142 80119177 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000117394.2, 1700106O07Rik ENSMUST00000234236.2 DRR091690, DRR091694, DRR091695, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR15198217, SRR15198218, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR9178976, SRR9178979, SRR9178981, SRR9178982 chr17 80421230 80421231 + Predicted SINE|Alu|B1_Mur4 ENSMUSG00000035473.11, Galm DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR9080666, SRR9178983, SRR9178984, SRR9178985, SRR9178992 chr17 84085416 84085417 - Annotated LTR|ERVK|RLTR31C_MM NR_168497.1 ENCFF001NDA, ENCFF002ERU, ENCFF450WAV, ENCFF993QUE, ENCFF565YJQ, DRR091697, SRR10697200, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2927111, SRR2927112, SRR2927113 chr17 84155312 84155313 - Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000000673.10, Haao ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF102BWR, ENCFF437AJW, ENCFF450WAV, ENCFF017LOD, ENCFF195JLT, ENCFF234LUQ, ENCFF712DGP, ENCFF935LAF, ENCFF945ICZ, ENCFF970VKB, ENCFF062GNP, ENCFF186VNL, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF442OKF, ENCFF499GDC, ENCFF574YMK, ENCFF720MPJ, ENCFF854IBU chr17 84161821 84161847 - Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000097254.3, C430042M11Rik ENSMUST00000180515.2, ENSMUST00000234697.2, NR_155490.1, NR_155491.1 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, ENCFF102BWR, ENCFF437AJW, ENCFF450WAV, ENCFF993QUE, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR6338004 chr17 84771929 84771930 - Predicted DNA|hAT-Charlie|MER20 ENSMUSG00000024251.11, Thada ENCFF001RTF, ENCFF001RTJ, ENCFF002DNB, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF143PHU, ENCFF489IGD, ENCFF350PHR, ENCFF358UHV chr17 8480318 8480319 - Predicted LINE|L2|L2c ENSMUSG00000120679.1, ENSMUSG00000120679 SRR2089611, SRR2089614, SRR2089620, SRR2089622, SRR2089623, SRR2089641, SRR2089643, SRR2089645 chr17 87223047 87223054 + Predicted SINE|B4|B4A ENSMUSG00000037689.7, Tmem247 DRR091688, DRR091689, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR11428468, SRR13142119, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR2040601, SRR2927112, SRR2927113, SRR9080666, SRR9178980, SRR9178983, SRR9178984, SRR9178991, SRR9178992 chr17 88934792 88934793 + Annotated SINE|MIR|MIRb ENSMUSG00000033855.16, Ston1 ENSMUST00000112216.2 chr17 92179553 92179579 - Annotated LTR|ERVK|RMER19A ENSMUSG00000117433.2, Gm41654 ENSMUST00000234442.2, ENSMUST00000234041.2, ENSMUST00000234556.2 DRR091693, SRR11428468, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198226, SRR15198227, SRR2040601, SRR9080662, SRR9178985 chr18 10610710 10610711 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000024293.17, Esco1 ENCFF001NCP, ENCFF001NCR, ENCFF001NEC, ENCFF027BYX, ENCFF205GJI, ENCFF210BCB, ENCFF225MMR, ENCFF514BEA, ENCFF527VIY, ENCFF593RAV, ENCFF623BKO, ENCFF670CXH, ENCFF782JNB, ENCFF796NHQ, ENCFF865WQE, ENCFF878SQO, ENCFF912RLS, ENCFF284AEN, ENCFF455DHP, ENCFF728TXU, ENCFF085RPW, ENCFF150HVU, ENCFF163DKN, ENCFF189BIW, ENCFF243TPB, ENCFF296UDD, ENCFF313IFI, ENCFF387BVS, ENCFF530DUT, ENCFF543PXT, ENCFF578PSU, ENCFF627XGF, ENCFF656DRS, ENCFF689RQK, ENCFF691DJE, ENCFF693POR, ENCFF727EPG, ENCFF838BEV, ENCFF872SFD, ENCFF956ZKG, ENCFF999ZYF, ENCFF477YHR, SRR11428469, SRR15198220, SRR15198226, SRR6338004 chr18 10610805 10610869 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000024293.17, Esco1 ENCFF001NEC, ENCFF001RTD, ENCFF001RTN, ENCFF059IQN, ENCFF090USB, ENCFF091WMS, ENCFF116MYR, ENCFF121BYS, ENCFF163LPQ, ENCFF225MMR, ENCFF261OTH, ENCFF326TQL, ENCFF345OIF, ENCFF470MXU, ENCFF495YGN, ENCFF528CBF, ENCFF593RAV, ENCFF670CXH, ENCFF775BPV, ENCFF878SQO, ENCFF991TPB, ENCFF013HYW, ENCFF284AEN, ENCFF345BBC, ENCFF455DHP, ENCFF609ZVL, ENCFF694NRG, ENCFF712DGP, ENCFF912MUD, ENCFF923VUD, ENCFF945ICZ, ENCFF053NFR, ENCFF061WTN, ENCFF073RJJ, ENCFF085RPW, ENCFF133KGZ, ENCFF267KZS, ENCFF296UDD, ENCFF321NRW, ENCFF338LFG, ENCFF387BVS, ENCFF390AUP, ENCFF430ERW, ENCFF476JSK, ENCFF482VRF, ENCFF543PXT, ENCFF598WAL, ENCFF627XGF, ENCFF637PIP, ENCFF673GRZ, ENCFF727EPG, ENCFF751QWY, ENCFF769FVU, ENCFF900AIQ, ENCFF062GNP, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF499GDC, ENCFF574YMK, ENCFF671TUD, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091695, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178981, SRR9178984, SRR9178986, SRR9178987, SRR9178989, SRR9178991, SRR9178992 chr18 12776242 12776243 + Predicted DNA|hAT-Tip100|Zaphod ENSMUSG00000024424.16, Ttc39c ENCFF178ZVU, ENCFF264DCN, ENCFF363CYZ, ENCFF421SNO, ENCFF005GQR, ENCFF335ZSA, ENCFF587VDB, ENCFF632LPV, ENCFF657FNE, ENCFF914YDJ, ENCFF923VUD, ENCFF023TPS, ENCFF149BQJ, ENCFF163BDT, ENCFF237JCE, ENCFF578MOR, ENCFF698WQO, ENCFF859MTL, ENCFF869DVY, ENCFF075EMK chr18 12859254 12859255 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000083332.2, Gm7599 SRR2089603, SRR2089604, SRR2089605, SRR2089607, SRR2089608, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr18 13103125 13103235 + Predicted LINE|L1|L1Lx_IV ENSMUSG00000024423.7, Impact ENCFF005NBP, ENCFF022FSI, ENCFF075MGH, ENCFF083BIG, ENCFF117BGT, ENCFF273CJD, ENCFF284OMO, ENCFF289WHW, ENCFF330IYN, ENCFF348VIH, ENCFF358UFZ, ENCFF366BBB, ENCFF376MQF, ENCFF432ZLQ, ENCFF472YPG, ENCFF491XRO, ENCFF494YXM, ENCFF552NWL, ENCFF622NXP, ENCFF672HUA, ENCFF723KAG, ENCFF723QIC, ENCFF745HSV, ENCFF844KCR, ENCFF844QDN, ENCFF849GVQ, ENCFF863RVB, ENCFF884DLS, ENCFF941QCZ, ENCFF982BLT, ENCFF912MUD, ENCFF065UBR, ENCFF124SSE, ENCFF133PKQ, ENCFF169JOQ, ENCFF264PYB, ENCFF272WGJ, ENCFF301VMF, ENCFF306FQJ, ENCFF335UNU, ENCFF357AGP, ENCFF358UHV, ENCFF371ZDG, ENCFF438ROC, ENCFF454DOT, ENCFF484PQK, ENCFF485GFE, ENCFF486GBM, ENCFF516QKR, ENCFF519AKK, ENCFF581ZWM, ENCFF598BFX, ENCFF612KDP, ENCFF646GBS, ENCFF668SQN, ENCFF694EPZ, ENCFF696TTO, ENCFF699SBZ, ENCFF724VJN, ENCFF726YTS, ENCFF757JMT, ENCFF764AQK, ENCFF770WIT, ENCFF779MMO, ENCFF781MKK, ENCFF791AUB, ENCFF829WND, ENCFF849PKR, ENCFF853PNO, ENCFF866IHG, ENCFF869MFM, ENCFF881YOK, ENCFF917KUH, ENCFF931NMQ, ENCFF934QGX, ENCFF937KFC, ENCFF958LRX, ENCFF970PLY, ENCFF976SMI, ENCFF119IHT chr18 15340847 15340848 - Annotated SINE|B4|ID_B1 ENSMUSG00000117404.2, Gm50035 ENSMUST00000234417.2 chr18 15479255 15479256 - Annotated LTR|ERV1|RLTR41 ENSMUSG00000119962.1, ENSMUSG00000119962 ENSMUST00000243167.1, ENSMUST00000240832.1 ENCFF181RDS chr18 15543985 15543986 - Annotated DNA|hAT-Charlie|RCHARR1 ENSMUSG00000024411.12, Aqp4 ENSMUST00000234533.2 ENCFF001RTD chr18 15544038 15544039 - Annotated DNA|hAT-Charlie|RCHARR1 ENSMUSG00000024411.12, Aqp4 ENSMUST00000235044.2, ENSMUST00000234518.2, ENSMUST00000234391.2, ENSMUST00000234473.2, ENSMUST00000234053.2, NM_001308646.1, NM_001308645.1, NM_001308643.1, NM_001308644.1, NM_001308642.1, NM_001308641.1 ENCFF001RTD chr18 17168786 17168787 + Predicted Retroposon|L1-dep|RMER1B ENSMUSG00000087170.8, 1700001G01Rik DRR091694, SRR13142119, SRR13142120, SRR15198222, SRR15198225 chr18 17452786 17452796 - Annotated LTR|ERVK|RLTR51A_Mm ENSMUSG00000117460.2, 4921533I20Rik ENSMUST00000234727.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697198, SRR10697199, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991 chr18 19266274 19266304 + Annotated LTR|ERVK|RLTR31A_Mm ENSMUSG00000117378.2, Gm31086 ENSMUST00000234128.2 DRR091689, DRR091691, DRR091693, DRR091694, DRR091695, DRR091698, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198225, SRR15198226, SRR2040601, SRR2927112, SRR2927113, SRR9178979, SRR9178982, SRR9178985, SRR9178986 chr18 21039562 21039567 - Predicted LTR|ERVK|MMERVK10C-int ENSMUSG00000033382.16, Trappc8 SRR2089603, SRR2089604, SRR2089607, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089634, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr18 24125426 24125427 + Predicted LTR|ERVL-MaLR|MTC-int ENSMUSG00000063281.10, Zfp35 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr18 24248001 24248004 - Predicted LINE|L1|L1ME2 ENSMUSG00000047989.12, Ino80c DRR091689, DRR091690, DRR091692, DRR091693, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR2040601, SRR9080662, SRR9080663, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178990 chr18 25367345 25367372 + Predicted LTR|ERVL-MaLR|MLT1A ENSMUSG00000033632.17, AW554918 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 33067755 33067756 - Predicted LTR|ERVL-MaLR|MLT1F ENSMUSG00000097710.3, 2310026I22Rik SRR10697197, SRR10697203, SRR15198225, SRR9080665, SRR9178978, SRR9178988 chr18 33067858 33067911 - Predicted LTR|ERVL-MaLR|MLT1F ENSMUSG00000097710.3, 2310026I22Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR3178205, SRR6338004, SRR6904685, SRR9080662, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 3327591 3327592 - Predicted DNA|DNA|UCON78 ENSMUSG00000063889.17, Crem ENSMUST00000151311.8, NM_001110859.2, NM_001271506.1, NM_001110856.2, NM_001271504.1, NM_001271503.1, NM_001271505.1, NM_013498.3, NM_001110857.2, NM_001110850.2, NM_001110858.2, NR_073193.1 ENCFF002EZU, ENCFF437AJW, ENCFF575RUC, SRR11428468, SRR13142121, SRR13142123, SRR3178204 chr18 34541542 34541543 + Annotated LTR|ERVL|MT2B1 ENSMUSG00000014503.16, Pkd2l2 ENSMUST00000236131.2, ENSMUST00000235732.2 chr18 35841434 35841471 - Annotated SINE|tRNA-RTE|MamSINE1 ENSMUSG00000024350.7, Dnajc18 ENSMUST00000237995.2, ENSMUST00000236738.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 36238704 36238705 + Annotated SINE|B4|B4A ENSMUSG00000117852.2, 4930471G03Rik ENSMUST00000237992.2, ENSMUST00000235617.2 SRR9178979, SRR9178986, SRR9178992 chr18 36920067 36920068 + Annotated DNA|hAT-Charlie|URR1A ENSMUSG00000019143.16, Hars2 ENSMUST00000131952.2 ENCFF332ZPO, ENCFF671ERF, ENCFF934QGX, ENCFF955WXI chr18 37053358 37053359 + Annotated LTR|ERVK|MYSERV-int NR_076393.1 chr18 37069336 37069366 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000103442.6, Pcdha1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr18 37751959 37751960 + Annotated LTR|ERVK|RLTR31M ENSMUSG00000104225.2, 4930517L18Rik ENSMUST00000191880.2 DRR091694, DRR091698, SRR11428467, SRR11428468, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198226, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr18 40854557 40854584 + Annotated LINE|L1|Lx9 ENSMUSG00000117847.2, Gm31205 ENSMUST00000237626.2, NR_166700.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643199, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 42274949 42274982 + Annotated LINE|CR1|L3 ENSMUSG00000057719.12, Sh3rf2 ENSMUST00000132681.8 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR6338004, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 47054848 47054900 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000073568.3, Arl14epl ENSMUST00000234910.2, NM_001033446.2 ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178205, SRR3178206, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 47585735 47585736 + Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000117602.2, 9130209A04Rik ENSMUST00000235070.2, NR_033453.1 chr18 49985314 49985315 + Predicted LINE|CR1|L3b ENSMUSG00000037416.14, Dmxl1 ENCFF002FAC, ENCFF143PHU, ENCFF198RBJ, ENCFF221NAP, ENCFF502ANK, ENCFF885AJK, ENCFF383AJS chr18 50152750 50152752 + Predicted DNA|hAT-Charlie|MER20 ENSMUSG00000062210.14, Tnfaip8 ENCFF067UCQ, ENCFF134HVE, ENCFF170XMM, ENCFF236TUH, ENCFF304DLW, ENCFF390NKP, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF657UWH, ENCFF686KMX, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF939IUH, ENCFF160TQC, ENCFF199IWW, ENCFF344OJQ, ENCFF423TSB, ENCFF641WPY, ENCFF723MAR chr18 51740739 51740740 - Annotated LINE|L1|L1MdF_I ENSMUSG00000077317.3, Gm25785 ENSMUST00000104129.3 chr18 52060567 52060611 - Predicted LINE|L1|Lx3A ENSMUSG00000118334.2, Gm50446 ENSMUST00000238114.2 DRR091688, DRR091689, DRR091691, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR15198217, SRR15198219, SRR15198220, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178979, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178990, SRR9178991, SRR9178992 chr18 54629642 54629674 - Annotated LTR|ERVK|RMER13B ENSMUSG00000118103.2, 4933434P08Rik ENSMUST00000237202.2, NR_166904.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643192, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 57506926 57506965 + Annotated LTR|ERVK|RLTR17 ENSMUSG00000024594.10, Prrc1 ENSMUST00000236755.2, ENSMUST00000238057.2 ENCFF001NDA, ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr18 59152534 59152535 + Predicted LINE|L1|Lx2 ENSMUSG00000053441.6, Adamts19 SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089648, SRR2089649, SRR2089650 chr18 59976809 59976833 - Predicted LTR|ERVK|RLTR51B_Mm ENSMUSG00000117701.2, Gm38695 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697197, SRR10697200, SRR11428468, SRR11428469, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178979, SRR9178989 chr18 60703854 60703855 + Predicted LTR|ERVK|RLTR20A4 ENSMUSG00000024604.8, Rbm22 ENCFF002DNB, ENCFF002FAC, ENCFF198RBJ, ENCFF208BJY, ENCFF319YFJ, SRR5643192 chr18 61533840 61533841 - Predicted SINE|MIR|MIRb ENSMUSG00000033871.15, Ppargc1b ENCFF121OLG, ENCFF295SYY, ENCFF449MIK, ENCFF005GQR, ENCFF156YWS, ENCFF199ZDO, ENCFF245ZOR, ENCFF296VFB, ENCFF374YTS, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF500QZK, ENCFF587VDB, ENCFF595WXV, ENCFF636NES, ENCFF647TTU, ENCFF657FNE, ENCFF686KMX, ENCFF725ATS, ENCFF747XPP, ENCFF834TQY, ENCFF399XUL, ENCFF499CDP, ENCFF525QIM chr18 61617837 61617847 + Annotated SINE|MIR|MIR ENSMUSG00000117713.2, Gm46637 ENSMUST00000237683.2, NR_168274.1 ENCFF084CWD, ENCFF173IVH, ENCFF199ZDO, ENCFF444YCN, ENCFF446FOZ, ENCFF737OUQ, ENCFF834VIK, ENCFF868WEJ, ENCFF975NCY, ENCFF306ADU, ENCFF342GAL, ENCFF454JTI, ENCFF667KKO, ENCFF715CAJ chr18 61779749 61779750 - Annotated SINE|B4|B4A ENSMUSG00000120623.1, ENSMUSG00000120623 ENSMUST00000244667.1 chr18 61852292 61852293 - Annotated LINE|CR1|L3 ENSMUSG00000024580.9, Grpel2 ENSMUST00000237466.2 chr18 61853627 61853628 - Predicted LINE|L1|L1MB8 ENSMUSG00000024580.9, Grpel2 ENCFF160HKC, ENCFF426QFT, ENCFF896MQK, ENCFF942WIP, ENCFF003GJV, ENCFF423GTP, ENCFF646GBS, ENCFF700IPC, ENCFF814PHK, ENCFF939UBM chr18 62070426 62070433 + Predicted LINE|L1|L1MA6 ENSMUSG00000045629.9, Sh3tc2 DRR091692, DRR091696, DRR091698, SRR10697195, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR11428468, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 62287352 62287353 + Predicted LTR|ERVL|LTR33A ENSMUSG00000118370.2, Gm41750 SRR2089636, SRR2089637, SRR2089639, SRR2089647 chr18 64387430 64387497 + Annotated SINE|Alu|B1_Mur2 ENSMUSG00000056812.15, St8sia3 ENSMUST00000025477.15, NM_009182.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr18 6491956 6491994 - Predicted SINE|Alu|B1_Mm ENSMUSG00000024240.14, Epc1 ENCFF027RRZ, ENCFF134HVE, ENCFF170XMM, ENCFF199ZDO, ENCFF222GPK, ENCFF245ZOR, ENCFF247QZW, ENCFF261ZZF, ENCFF269WEZ, ENCFF304DLW, ENCFF330FNX, ENCFF369YLA, ENCFF391UFN, ENCFF446FOZ, ENCFF467LJD, ENCFF468AKL, ENCFF510TTU, ENCFF516BTG, ENCFF521NCL, ENCFF533DWD, ENCFF572TOH, ENCFF590LNP, ENCFF595WXV, ENCFF642YTY, ENCFF657UWH, ENCFF667SYQ, ENCFF686KMX, ENCFF694NRG, ENCFF704WWK, ENCFF721ASG, ENCFF721BNO, ENCFF728TXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF766LGO, ENCFF785TEQ, ENCFF803VZZ, ENCFF808PVJ, ENCFF829RHM, ENCFF912MUD, ENCFF914YDJ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF975NCY, ENCFF978EQI, ENCFF315HBU, ENCFF075EMK, ENCFF160TQC, ENCFF199IWW, ENCFF254YNR, ENCFF269AST, ENCFF306ADU, ENCFF319SDE, ENCFF344OJQ, ENCFF366CUG, ENCFF517DCU, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF705HQV, ENCFF723MAR, ENCFF827NYZ, SRR2927112 chr18 65173776 65173777 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000120534.1, ENSMUSG00000120534 ENSMUST00000244042.1 chr18 65934050 65934051 + Annotated LINE|CR1|L3 ENSMUSG00000024516.14, Sec11c ENSMUST00000235411.2 ENCFF953WBM chr18 67461040 67461041 - Annotated LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000046415.12, B430212C06Rik ENSMUST00000144078.8 chr18 67771982 67771983 - Annotated SINE|B2|B2_Mm2 ENSMUSG00000073542.4, Cep76 ENSMUST00000236857.2 chr18 6785418 6785461 + Predicted DNA|hAT-Charlie|MER58B ENSMUSG00000073639.7, Rab18 ENCFF040EEJ, ENCFF107XGE, ENCFF108UNS, ENCFF262WAE, ENCFF307VAF, ENCFF319INV, ENCFF330LWU, ENCFF415KCJ, ENCFF453XOG, ENCFF552NWL, ENCFF570GTP, ENCFF605IFN, ENCFF641QXI, ENCFF671ERF, ENCFF764EJV, ENCFF780TUN, ENCFF913CFN, ENCFF006JHA, ENCFF055PZZ, ENCFF107YGR, ENCFF136DUH, ENCFF328TJH, ENCFF427YDU, ENCFF470RDW, ENCFF483SQS, ENCFF507VMW, ENCFF519AKK, ENCFF548HOL, ENCFF561CZI, ENCFF585CYT, ENCFF655KBW, ENCFF685FUZ, ENCFF700IPC, ENCFF772QLP, ENCFF779MMO, ENCFF858OFI, ENCFF866IHG, ENCFF875BUD, ENCFF950FFF, ENCFF952EQQ, ENCFF964HGL, ENCFF974KKD, ENCFF996AOW chr18 6785680 6785681 + Predicted SINE|B2|B3A ENSMUSG00000073639.7, Rab18 ENCFF196PBF, ENCFF279BVM, ENCFF544BEF, ENCFF771LLL, ENCFF823PZU, ENCFF858CTQ, ENCFF942WIP, ENCFF979WZO, ENCFF030IFE, ENCFF043DTH, ENCFF077CYB, ENCFF088PZI, ENCFF148BPZ, ENCFF149JXW, ENCFF272WGJ, ENCFF477MBL, ENCFF538ZTW, ENCFF618PVF, ENCFF750IZJ, ENCFF755REI, ENCFF758JNE, ENCFF843WRN, ENCFF859MTL, ENCFF985NHB chr18 6785740 6785741 + Predicted SINE|B2|B3A ENSMUSG00000073639.7, Rab18 ENCFF196PBF, ENCFF279BVM, ENCFF544BEF, ENCFF771LLL, ENCFF858CTQ, ENCFF942WIP, ENCFF979WZO, ENCFF030IFE, ENCFF043DTH, ENCFF077CYB, ENCFF088PZI, ENCFF142PTA, ENCFF148BPZ, ENCFF149JXW, ENCFF272WGJ, ENCFF378TYU, ENCFF477MBL, ENCFF538ZTW, ENCFF618PVF, ENCFF750IZJ, ENCFF755REI, ENCFF758JNE, ENCFF843WRN, ENCFF859MTL, ENCFF985NHB chr18 67905272 67905273 + Predicted LINE|L1|Lx8 ENSMUSG00000024542.10, ENSMUSG00000079614.5, Cep192, Seh1l ENCFF465BBM, ENCFF487DYP, ENCFF500QZK, ENCFF595WXV, ENCFF654AEJ, SRR15198224, SRR15198227 chr18 68531175 68531176 + Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000117811.3, Gm29677 ENSMUST00000242576.1 ENCFF001NDZ, ENCFF001NEC, ENCFF002DNB chr18 69726247 69726285 + Predicted LTR|ERVK|RLTR31D_MM ENSMUSG00000053477.19, Tcf4 ENCFF001NDA, ENCFF001NDD, ENCFF002EZY, ENCFF002FAC, ENCFF091WMS, ENCFF125HRQ, ENCFF229AIZ, ENCFF251TMY, ENCFF283XKV, ENCFF363CYZ, ENCFF393UZV, ENCFF426QFT, ENCFF647ICR, ENCFF755FCM, ENCFF907HVO, ENCFF005GQR, ENCFF013CHH, ENCFF115LWP, ENCFF151YNV, ENCFF156YWS, ENCFF223BXU, ENCFF233IFH, ENCFF247QZW, ENCFF261ZZF, ENCFF269SRJ, ENCFF308FEA, ENCFF355AMN, ENCFF377LAC, ENCFF379TZT, ENCFF442FJC, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF519YGA, ENCFF573UIH, ENCFF609ZVL, ENCFF744OEI, ENCFF754TOT, ENCFF766LGO, ENCFF809FPA, ENCFF826RUZ, ENCFF834VIK, ENCFF854KNE, ENCFF886BRO, ENCFF952BCB, ENCFF969WLB, ENCFF006JHA, ENCFF080BTV, ENCFF103SQR, ENCFF111MWQ, ENCFF203EWG, ENCFF222MKT, ENCFF229TCX, ENCFF268YSJ, ENCFF271RFU, ENCFF311MZV, ENCFF319YFJ, ENCFF324ITL, ENCFF350PHR, ENCFF358UHV, ENCFF397ZQU, ENCFF411YXB, ENCFF483KXD, ENCFF498OHV, ENCFF505WKA, ENCFF507WIK, ENCFF596PMK, ENCFF646GBS, ENCFF680OWA, ENCFF695XIY, ENCFF764AQK, ENCFF770WIT, ENCFF790WIY, ENCFF796TQV, ENCFF855UFX, ENCFF903KDM, ENCFF926IDV, ENCFF937KFC, ENCFF955WXI, ENCFF996AOW, ENCFF075EMK, ENCFF160TQC, ENCFF197NCG, ENCFF277QHC, ENCFF510IAG, ENCFF555BQD, ENCFF667KKO, ENCFF670VVN, ENCFF705HQV, ENCFF733LFV, ENCFF783KGQ, ENCFF803OIY, ENCFF932SOZ, ENCFF970VKL, SRR10697203, SRR15198217, SRR15198218, SRR15198222, SRR15198224, SRR15198225, SRR15198227 chr18 70663690 70663691 - Annotated SINE|B2|B3A ENSMUSG00000038425.19, Poli ENSMUST00000121674.9 SRR15198224, SRR15198225, SRR6338004, SRR9178980, SRR9178986, SRR9178987, SRR9178988, SRR9178990 chr18 73666620 73666621 - Annotated LTR|ERVK|LTR10_RN ENSMUSG00002075795.1, Gm54867 ENSMUST00020182528.1 chr18 73812243 73812248 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000024515.14, Smad4 ENCFF120DEX, ENCFF304MIZ, ENCFF443PSO, ENCFF491XRO, ENCFF581WWO, ENCFF608NVM, ENCFF671ERF, ENCFF727WWV, ENCFF823PZU, ENCFF962LFN, ENCFF972IVS, ENCFF024CUG, ENCFF047LTH, ENCFF088PZI, ENCFF134PXJ, ENCFF136DUH, ENCFF136TYP, ENCFF209RRO, ENCFF272WGJ, ENCFF292KWK, ENCFF302KQL, ENCFF305GPD, ENCFF310BWG, ENCFF328TJH, ENCFF376PQU, ENCFF383AJS, ENCFF386XTQ, ENCFF399YLV, ENCFF427YDU, ENCFF466RIS, ENCFF486GBM, ENCFF513BRJ, ENCFF524PAV, ENCFF536ZFC, ENCFF618PVF, ENCFF685GDB, ENCFF700IPC, ENCFF711XWR, ENCFF754VQW, ENCFF758IOS, ENCFF794GVC, ENCFF869MFM, ENCFF883APB, ENCFF903ULI, ENCFF996WVL chr18 73880387 73880445 - Predicted SINE|B4|ID_B1 ENSMUSG00000036941.3, Elac1 ENCFF002EZY, ENCFF002FAC, ENCFF056GXQ, ENCFF426QFT, ENCFF764EJV, ENCFF005GQR, ENCFF013CHH, ENCFF027RRZ, ENCFF156YWS, ENCFF195JLT, ENCFF199ZDO, ENCFF245ZOR, ENCFF271OHB, ENCFF274ESJ, ENCFF308FEA, ENCFF345BBC, ENCFF364LFJ, ENCFF374YTS, ENCFF379TZT, ENCFF391UFN, ENCFF444YCN, ENCFF455DHP, ENCFF487DYP, ENCFF596QWT, ENCFF608LAL, ENCFF632LPV, ENCFF654AEJ, ENCFF686KMX, ENCFF712DGP, ENCFF714CKE, ENCFF756QCA, ENCFF822PGJ, ENCFF854KNE, ENCFF862FYE, ENCFF868WEJ, ENCFF914YDJ, ENCFF943XKB, ENCFF967NOO, ENCFF254VIN, ENCFF275HRX, ENCFF357QTB, ENCFF484PQK, ENCFF490ULA, ENCFF904KCQ, ENCFF248ELC, ENCFF260KJY, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF349AIG, ENCFF366CUG, ENCFF510IAG, ENCFF525QIM, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF653QJY, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF970VKL, DRR091690, DRR091693, DRR091695, SRR11428470 chr18 74353429 74353430 + Predicted LINE|CR1|X6B_LINE ENSMUSG00000024560.8, Cxxc1 ENCFF002DMZ, ENCFF082HKQ, ENCFF106GQS, ENCFF181RDS, ENCFF033DWC, ENCFF157IFW, ENCFF299ENO chr18 74400676 74400677 + Annotated LTR|ERV1|RLTR6B_Mm ENSMUSG00000024561.12, Mbd1 ENSMUST00000224907.2 ENCFF001RTD, ENCFF134HVE, ENCFF173IVH, ENCFF251WZA, ENCFF269WEZ, ENCFF315OOH, ENCFF446FOZ, ENCFF609KQB, ENCFF651SDJ, ENCFF670FEL, ENCFF766LGO, ENCFF785TEQ, ENCFF845NXM, ENCFF855FCX, ENCFF868WEJ, ENCFF923VUD, ENCFF943XKB, ENCFF952BCB, ENCFF160TQC, ENCFF319SDE, ENCFF454JTI, ENCFF555BQD, ENCFF827NYZ, SRR13142121 chr18 74400816 74400817 + Predicted LTR|ERV1|RLTR6B_Mm ENSMUSG00000024561.12, Mbd1 ENCFF134HVE, ENCFF143BIC, ENCFF173IVH, ENCFF269WEZ, ENCFF270ERO, ENCFF315OOH, ENCFF330FNX, ENCFF364LFJ, ENCFF444YCN, ENCFF446FOZ, ENCFF516BTG, ENCFF588DUN, ENCFF609KQB, ENCFF651SDJ, ENCFF657OJR, ENCFF686KMX, ENCFF697AST, ENCFF756QCA, ENCFF785TEQ, ENCFF804UQS, ENCFF840XYZ, ENCFF868WEJ, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF160TQC, ENCFF199IWW, ENCFF242SVY, ENCFF319SDE, ENCFF423TSB, ENCFF454JTI, ENCFF481CFU, ENCFF555BQD, ENCFF723MAR, ENCFF827NYZ chr18 76432855 76432856 + Predicted LINE|L2|L2 ENSMUSG00000024563.17, Smad2 ENCFF048FGD, ENCFF051JGE, ENCFF143PHU, ENCFF885AJK, ENCFF052RNG, ENCFF127KHN, ENCFF538AIM, ENCFF694EPZ chr18 77126226 77126227 + Predicted LTR|ERVK|RLTR25B ENSMUSG00000025423.17, Pias2 ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr18 77877614 77877615 + Annotated LTR|ERVK|RLTR31B_Mm ENSMUSG00000025429.10, Pstpip2 ENSMUST00000238172.2 ENCFF089PFT, ENCFF521IDK, ENCFF632LPV chr18 80229454 80229455 + Annotated LTR|ERVK|MLTR25A ENSMUSG00000118061.3, Rbfaos ENSMUST00000243491.1, ENSMUST00000236423.2, NR_131039.1 ENCFF001NDA, ENCFF001NDD chr18 80296507 80296508 + Annotated LTR|ERVL|RLTR35B_MM ENSMUSG00000034006.18, Slc66a2 ENSMUST00000131780.8 ENCFF001RTD, SRR10697197, SRR11428469, SRR15198217, SRR15198219 chr18 81815274 81815289 + Annotated LTR|ERVK|RLTR31D_MM ENSMUSG00000118254.2, Gm46614 ENSMUST00000236148.2 ENCFF001NCR, DRR091695, SRR10697197, SRR10697201, SRR10697203, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178983 chr18 84609117 84609118 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000048410.18, Zfp407 ENCFF001NCP, ENCFF001NCR, ENCFF002EZW, ENCFF002FAI, ENCFF102AMK, ENCFF114PSQ, ENCFF133PEB, ENCFF251TMY, ENCFF277XPM, ENCFF289WHW, ENCFF432ZLQ, ENCFF552NWL, ENCFF941QCZ, ENCFF052RNG, ENCFF066MTU, ENCFF144EDQ, ENCFF254TFB, ENCFF255ESE, ENCFF267KZS, ENCFF421DHQ, ENCFF477MBL, ENCFF578YPJ, ENCFF637CVI, ENCFF926IDV, ENCFF186VNL, ENCFF749STK, SRR13142120, SRR9080664 chr18 84953150 84953154 + Annotated LTR|ERVL|MT2B2 ENSMUSG00000034391.13, Fbxo15 ENSMUST00000225445.2, NM_015798.5 ENCFF001NDD chr18 88905189 88905190 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000056153.16, Socs6 ENCFF002EZY, ENCFF002FAI, ENCFF089PFT, ENCFF489IGD, ENCFF521IDK, ENCFF696TCH, ENCFF084CWD, ENCFF385UBP, ENCFF924LPZ chr18 89224225 89224226 + Annotated LINE|L2|L2a ENSMUSG00000034028.17, Cd226 ENSMUST00000236835.2 ENCFF001RTN, ENCFF102BWR, ENCFF993QUE chr18 9475666 9475668 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000117503.2, Gm7527 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr18 9914203 9914253 + Predicted LINE|L1|L1MdA_III ENSMUSG00000092039.3, Gm5501 SRR2089603, SRR2089609, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr18 9931811 9931812 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000092039.3, Gm5501 SRR2089603, SRR2089604, SRR2089607, SRR2089609, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089638, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089646, SRR2089647, SRR2089651 chr19 10048550 10048551 - Annotated LTR|ERV1|MLTR14 ENSMUSG00000024665.9, Fads2 ENSMUST00000238023.2 chr19 10468818 10468839 - Predicted SINE|B4|B4 ENSMUSG00000024668.9, ENSMUSG00000035179.5, Sdhaf2, Ppp1r32 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR6338004, SRR9080666, SRR9178982, SRR9178985, SRR9178988 chr19 10552046 10552047 + Predicted SINE|B4|RSINE1 ENSMUSG00000117955.2, Gm50205 SRR2089620, SRR2089621, SRR2089622, SRR2089629, SRR2089631, SRR2089634 chr19 10585158 10585159 + Predicted LINE|CR1|L3 ENSMUSG00000024740.11, Ddb1 ENCFF048FGD, ENCFF089WMB, ENCFF198RBJ, ENCFF452AXW, ENCFF502ANK, ENCFF570KYE, ENCFF885AJK, ENCFF888LGA, ENCFF302KQL, ENCFF334XFS chr19 10665375 10665386 + Predicted LTR|ERV1|RMER5 ENSMUSG00000048832.10, Vps37c ENCFF606XHA, DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091695, DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR9080663, SRR9178976, SRR9178978, SRR9178980, SRR9178981, SRR9178983, SRR9178989, SRR9178990, SRR9178991 chr19 10916697 10916698 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000034117.4, Ptgdr2 SRR2089623, SRR2089629, SRR2089638, SRR2089651 chr19 11269793 11269794 + Annotated LTR|ERVK|RLTR9E ENSMUSG00000097091.3, 4930526L06Rik ENSMUST00000241509.1 chr19 11365136 11365137 - Annotated LTR|ERVK|RMER19B2 ENSMUSG00000120733.1, ENSMUSG00000120733 ENSMUST00000245463.1 chr19 11463297 11463303 + Annotated LTR|ERVK|RMER19C ENSMUSG00000058470.11, Gm8369 ENSMUST00000189635.7 ENCFF001NCP, ENCFF001RTF, ENCFF450WAV, ENCFF013HYW, ENCFF017LOD, ENCFF274ESJ, ENCFF359GCY, ENCFF712DGP, ENCFF933KQV, ENCFF935LAF, ENCFF945ICZ, ENCFF062GNP, ENCFF248ELC, ENCFF260KJY, ENCFF349AIG, ENCFF442OKF, ENCFF574YMK, ENCFF653QJY, ENCFF671TUD, ENCFF720MPJ, ENCFF854IBU, ENCFF904RJF chr19 11463473 11463474 + Annotated LTR|ERVK|RMER19C ENSMUSG00000058470.11, Gm8369 ENSMUST00000185867.2 ENCFF001RTN, ENCFF793IYH, ENCFF359GCY, ENCFF945ICZ, ENCFF499GDC chr19 11514158 11514208 + Annotated LTR|ERVK|RMER13B ENSMUSG00000024678.7, Ms4a4d ENSMUST00000025581.7, NM_025658.5 ENCFF001NDD, ENCFF001RTD, ENCFF001RTN, ENCFF067UCQ, ENCFF134HVE, ENCFF151YNV, ENCFF170XMM, ENCFF236TUH, ENCFF245ZOR, ENCFF251WZA, ENCFF261ZZF, ENCFF369YLA, ENCFF390NKP, ENCFF391UFN, ENCFF429BQZ, ENCFF467LJD, ENCFF484HRX, ENCFF510LAE, ENCFF516BTG, ENCFF588DUN, ENCFF596QWT, ENCFF604SXL, ENCFF657UWH, ENCFF686KMX, ENCFF697AST, ENCFF721ASG, ENCFF768ZCF, ENCFF775SSI, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF829RHM, ENCFF840XYZ, ENCFF855FCX, ENCFF923VUD, ENCFF160TQC, ENCFF277QHC, ENCFF344OJQ, ENCFF423TSB, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF705HQV, ENCFF723MAR, ENCFF782WDV, ENCFF783KGQ, DRR091693, DRR091696, SRR10697198, SRR10697202, SRR11428469, SRR13142119, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665 chr19 11721142 11721152 + Predicted Retroposon|L1-dep|RMER1A ENSMUSG00000024682.4, Cblif DRR091694, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178979, SRR9178982 chr19 13025018 13025023 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000094986.4, Or5b102 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr19 14060797 14060798 - Predicted LTR|ERVK|RLTR10C ENSMUSG00000098074.2, Gm26993 DRR091691, DRR091693, SRR11428468, SRR11428469, SRR15198217, SRR15198222, SRR15198228, SRR2927113 chr19 18533347 18533348 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000024725.14, Ostf1 SRR2089605, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089636, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr19 19253835 19253836 + Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000118109.2, Gm41815 ENSMUST00000236214.2, ENSMUST00000237424.2 DRR091694, DRR091696, SRR11428468, SRR15198217, SRR15198220, SRR15198223, SRR15198227 chr19 21185778 21185826 - Annotated LINE|L1|Lx8 ENSMUSG00000118086.2, Gm52981 ENSMUST00000235897.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr19 21691179 21691219 + Annotated LTR|ERVK|RLTR20D ENSMUSG00000121016.1, ENSMUSG00000121016 ENSMUST00000246872.1 ENCFF001NCP, ENCFF001RTF, ENCFF262URV, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697198, SRR10697203, SRR13142119, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178981, SRR9178982, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990 chr19 23053216 23053217 - Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000097930.4, C330002G04Rik ENSMUST00000181623.3 chr19 23053287 23053288 - Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000097930.4, C330002G04Rik ENSMUST00000236056.2 ENCFF001NDA chr19 23193977 23194022 - Predicted SINE|Alu|B1_Mm ENSMUSG00000024943.10, Smc5 ENCFF023RRS, ENCFF083CUR, ENCFF130KZZ, ENCFF147GLI, ENCFF160HKC, ENCFF198NQV, ENCFF207DLW, ENCFF273CJD, ENCFF385GUJ, ENCFF393UZV, ENCFF525POD, ENCFF535YBP, ENCFF570GTP, ENCFF622NXP, ENCFF639RWJ, ENCFF645QUX, ENCFF723KAG, ENCFF723QIC, ENCFF745HSV, ENCFF794FBC, ENCFF913CFN, ENCFF012KPC, ENCFF045YRV, ENCFF077YZF, ENCFF080BTV, ENCFF118PQI, ENCFF127KHN, ENCFF137OYQ, ENCFF148BPZ, ENCFF149JXW, ENCFF198XFF, ENCFF260BJB, ENCFF272WGJ, ENCFF310HAL, ENCFF346UBA, ENCFF386HCR, ENCFF403CRC, ENCFF453MPR, ENCFF464KYQ, ENCFF513BRJ, ENCFF543GNI, ENCFF549KAB, ENCFF565FFU, ENCFF585CYT, ENCFF613SEJ, ENCFF669PMR, ENCFF687STH, ENCFF706BUS, ENCFF757JMT, ENCFF804EWD, ENCFF818ZJQ, ENCFF825JNK, ENCFF829HAB, ENCFF869MFM, ENCFF885ZAO, ENCFF956RCJ, ENCFF971DTR chr19 23984706 23984724 - Predicted LTR|ERV1|LTR78 ENSMUSG00000071604.6, Entrep1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643199, SRR9080662, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr19 26023810 26023871 - Annotated SINE|ID|ID4 ENSMUSG00000118016.2, 1700048O14Rik ENSMUST00000237184.2, NR_166756.1, NR_166754.2, NR_166755.2 DRR091690, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697203, SRR11428469, SRR2927111, SRR2927112, SRR5643190, SRR6904685, SRR9080663, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr19 27324678 27324679 + Predicted LTR|ERVL-MaLR|MLT1C ENSMUSG00000117752.2, Gm35554 SRR6904683, SRR6904684, SRR6904685 chr19 29044636 29044702 + Annotated LINE|L2|L2 ENSMUSG00000118038.3, Gm9895 ENSMUST00000235636.3, ENSMUST00000240789.1, ENSMUST00000242995.1, ENSMUST00000241410.1, ENSMUST00000241932.1, ENSMUST00000241060.1, ENSMUST00000241593.1, ENSMUST00000242072.1, ENSMUST00000242440.1, ENSMUST00000241290.1, NR_045687.1 ENCFF001NDA, ENCFF001RTD, ENCFF001RTN, ENCFF002ERU, ENCFF002FAA, ENCFF002FAC, ENCFF181RDS, ENCFF198RBJ, ENCFF452AXW, ENCFF575RUC, ENCFF793IYH, ENCFF151YNV, ENCFF721ASG, ENCFF407JTK, ENCFF565YJQ, SRR15198227, SRR2927111, SRR2927113 chr19 29238774 29238775 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000024789.14, Jak2 ENCFF083CUR, ENCFF264RIV, ENCFF672HUA, ENCFF946AGD, ENCFF972IVS, ENCFF141YUD, ENCFF453MPR, ENCFF759WDO, ENCFF817HZQ chr19 29344632 29344812 - Annotated LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000016495.13, Plgrkt ENSMUST00000138051.2, ENSMUST00000139176.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002ERU, ENCFF002ERW, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF082HKQ, ENCFF083BIG, ENCFF083CUR, ENCFF084PUC, ENCFF086ZMV, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF143PHU, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF168WHQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207DLW, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF234MZC, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF264RIV, ENCFF265LKR, ENCFF269UZL, ENCFF273CJD, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF295SYY, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330IYN, ENCFF330LWU, ENCFF331WKS, ENCFF332ZPO, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF358UFZ, ENCFF363CYZ, ENCFF363XWU, ENCFF366BBB, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF400XLQ, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF422ATU, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF453XOG, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF472YPG, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF535YBP, ENCFF540XSD, ENCFF544BEF, ENCFF548SLN, ENCFF552DRF, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570GTP, ENCFF581WWO, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF608NVM, ENCFF621PKT, ENCFF622NXP, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764TGO, ENCFF764ZUI, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF787LWL, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793STU, ENCFF794FBC, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844KCR, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF863RVB, ENCFF865WQE, ENCFF868XLZ, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF906FNQ, ENCFF907HVO, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931DDH, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF994BOT, ENCFF996STG, ENCFF013HYW, ENCFF017LOD, ENCFF027RRZ, ENCFF101BDM, ENCFF115LWP, ENCFF234LUQ, ENCFF251WZA, ENCFF270ERO, ENCFF274ESJ, ENCFF330FNX, ENCFF345BBC, ENCFF359GCY, ENCFF442FJC, ENCFF467LJD, ENCFF510LAE, ENCFF521NCL, ENCFF532UKS, ENCFF573UIH, ENCFF608LAL, ENCFF609ZVL, ENCFF651SDJ, ENCFF667SYQ, ENCFF683CWD, ENCFF694NRG, ENCFF712DGP, ENCFF728TXU, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF838YLT, ENCFF862FYE, ENCFF912MUD, ENCFF923VUD, ENCFF933KQV, ENCFF935LAF, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF967NOO, ENCFF970VKB, ENCFF975NCY, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF008YSM, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF019PWU, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF027GCQ, ENCFF027QGO, ENCFF030IFE, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF039DES, ENCFF039PJR, ENCFF041PJP, ENCFF043DTH, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF060FGD, ENCFF061WTN, ENCFF064VAD, ENCFF065UBR, ENCFF065ZIE, ENCFF066MTU, ENCFF066UDR, ENCFF067OYG, ENCFF068CQU, ENCFF068KDU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF077YZF, ENCFF078CCF, ENCFF080BTV, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF087XKQ, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF090EUZ, ENCFF094RHV, ENCFF095NMU, ENCFF098AYQ, ENCFF098TCZ, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF117ZMM, ENCFF118PQI, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF127DCC, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF134VWD, ENCFF136DUH, ENCFF136TYP, ENCFF137OYQ, ENCFF139JTM, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF149DFF, ENCFF149JXW, ENCFF150HVU, ENCFF151XBP, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF167GWU, ENCFF169JOQ, ENCFF170KWW, ENCFF172DMS, ENCFF174EGP, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF185TRT, ENCFF186NDY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF197TJB, ENCFF199AAD, ENCFF201IQS, ENCFF203EWG, ENCFF205CDI, ENCFF207HZS, ENCFF207RVA, ENCFF208BJY, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF242MZE, ENCFF243TPB, ENCFF247VEN, ENCFF248XZC, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF257EYD, ENCFF258WLS, ENCFF260BJB, ENCFF260UQJ, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268YSJ, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF292KWK, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF310BWG, ENCFF310HAL, ENCFF310WDZ, ENCFF311MZV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF319YFJ, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332IRR, ENCFF332RWQ, ENCFF335UNU, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346NGU, ENCFF346UBA, ENCFF347EUO, ENCFF348RRM, ENCFF350KYC, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF366CSN, ENCFF366IEQ, ENCFF369VAI, ENCFF370VOV, ENCFF371ZDG, ENCFF374VAZ, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF386CRY, ENCFF386HCR, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF394AUR, ENCFF397MUI, ENCFF397ZQU, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF411YXB, ENCFF414IHO, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422CQE, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF427YDU, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF438ROC, ENCFF439BEV, ENCFF439HXQ, ENCFF440IAL, ENCFF443URE, ENCFF450CUC, ENCFF453MPR, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478MHH, ENCFF478YRJ, ENCFF479WHZ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF486GBM, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF497NJW, ENCFF498OHV, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF515GXB, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF529YFS, ENCFF530DUT, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZFC, ENCFF536ZVF, ENCFF537DSI, ENCFF538ZTW, ENCFF541HSQ, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF557JPW, ENCFF558UDY, ENCFF559QXN, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF565FFU, ENCFF566HCI, ENCFF569ELL, ENCFF572JDP, ENCFF572SQL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF580KHN, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF584ZUK, ENCFF585CYT, ENCFF587HBC, ENCFF588JAU, ENCFF591WVP, ENCFF593TQB, ENCFF594GIP, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF612KDP, ENCFF613SEJ, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637CVI, ENCFF637GVH, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF661TOM, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF668SQN, ENCFF669PMR, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF673SLO, ENCFF673ZDG, ENCFF678CRA, ENCFF680OWA, ENCFF680WIN, ENCFF681EEO, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF687STH, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF694EPZ, ENCFF695XIY, ENCFF696QTS, ENCFF696TTO, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF717GIT, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740TFX, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF753HNF, ENCFF754VQW, ENCFF755REI, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF759WDO, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF779MMO, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF782CNW, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF798TFC, ENCFF801SNQ, ENCFF803ZUN, ENCFF804EWD, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF825JNK, ENCFF829HAB, ENCFF829WND, ENCFF830CBI, ENCFF832FTK, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF861RRQ, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF885ZAO, ENCFF886UAF, ENCFF894COY, ENCFF896XAZ, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF900LFN, ENCFF901KUE, ENCFF903KDM, ENCFF903ULI, ENCFF904KCQ, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF930JCE, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF934VFW, ENCFF935ZEM, ENCFF936DQW, ENCFF936LNA, ENCFF937KFC, ENCFF938CNS, ENCFF938XTE, ENCFF939QLN, ENCFF939UBM, ENCFF944RHJ, ENCFF946LMX, ENCFF948BDY, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF951PCM, ENCFF952EQQ, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955WXI, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958BIE, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF971DTR, ENCFF974KKD, ENCFF974XWJ, ENCFF976SMI, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF014SLC, ENCFF062GNP, ENCFF178HDG, ENCFF186VNL, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF306ADU, ENCFF349AIG, ENCFF366CUG, ENCFF442OKF, ENCFF454JTI, ENCFF477YHR, ENCFF494ZWE, ENCFF499GDC, ENCFF574YMK, ENCFF582WGH, ENCFF671TUD, ENCFF720MPJ, ENCFF854IBU, ENCFF904RJF, SRR15198217, SRR15198222, SRR15198224, SRR2040601, SRR2927112 chr19 29929216 29929217 + Annotated LTR|ERVL-MaLR|MTEa ENSMUSG00000024810.17, Il33 ENSMUST00000136850.2 chr19 30562702 30562704 - Predicted LINE|CR1|L3 ENSMUSG00000052920.17, Prkg1 ENCFF002FAC, ENCFF392TDB, ENCFF933UPG, ENCFF326UXM, ENCFF385UBP, ENCFF394BDJ, ENCFF818BAS, ENCFF822PGJ, ENCFF943XKB, ENCFF243TPB, ENCFF458EUS, SRR13142121, SRR6904683, SRR6904685 chr19 30575045 30575046 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000052920.17, Prkg1 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr19 32182836 32182837 - Predicted LTR|ERVL|MERVL_2A-int ENSMUSG00000040451.19, Sgms1 ENCFF120DEX, ENCFF262URV, ENCFF022ACG, ENCFF034WGV, ENCFF049WBL, ENCFF116DGU, ENCFF149DFF, ENCFF470RDW, ENCFF578YPJ, ENCFF782CNW, ENCFF829HAB, ENCFF910CTW, ENCFF996AOW chr19 32237342 32237343 - Predicted LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000040451.19, Sgms1 ENCFF023MKT, ENCFF234LUQ, ENCFF345BBC, ENCFF455DHP, ENCFF609ZVL, ENCFF970VKB, ENCFF538AIM chr19 32300628 32300629 - Annotated DNA|hAT?|MER99 ENSMUSG00000040451.19, Sgms1 ENSMUST00000141655.8 ENCFF001RTN chr19 3383725 3383726 + Annotated SINE|Alu|PB1D9 ENSMUSG00000024900.6, Cpt1a ENSMUST00000237562.2 chr19 34044929 34044930 + Annotated SINE|MIR|MIRc ENSMUSG00000024770.15, Lipn ENSMUST00000148821.2 chr19 34132390 34132391 - Predicted LTR|ERVL|MT2_Mm ENSMUSG00000024774.17, Ankrd22 DRR091695, DRR091698, DRR091699, SRR15198223, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178983, SRR9178989 chr19 34458788 34458815 + Predicted SINE|B2|B3 ENSMUSG00000097558.2, Gm26902 SRR2089604, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089615, SRR2089617, SRR2089623, SRR2089629, SRR2089630, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr19 35901968 35901978 - Annotated LTR|ERVL-MaLR|MLT1G ENSMUSG00000094707.4, A830019P07Rik ENSMUST00000236698.2, ENSMUST00000237777.2, ENSMUST00000178904.2, ENSMUST00000238067.2, NR_152130.1 chr19 36560441 36560465 + Predicted LINE|L1|HAL1M8 ENSMUSG00000041180.14, Hectd2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR11428467, SRR11428469, SRR11428470, SRR13142120, SRR15198222, SRR2040601, SRR2927112, SRR2927113, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr19 36603410 36603458 - Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000087579.9, Hectd2os ENSMUST00000244111.1, ENSMUST00000242531.1, ENSMUST00000241489.1, ENSMUST00000244245.1, ENSMUST00000244495.1, ENSMUST00000243833.1, ENSMUST00000245516.1, ENSMUST00000147754.9 ENCFF001RTD, ENCFF001RTN, ENCFF838YLT chr19 36939040 36939041 + Predicted LINE|CR1|L3 ENSMUSG00000040565.9, Btaf1 ENCFF048FGD, ENCFF106GQS, ENCFF836JVX, ENCFF334XFS, SRR5643191 chr19 37175491 37175574 - Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000039652.17, Cpeb3 ENSMUST00000123727.8, NM_001290829.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR9080664, SRR9080666, SRR9178977, SRR9178979, SRR9178981, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178992 chr19 38045859 38045860 + Predicted SINE|Alu|B1F ENSMUSG00000024989.16, Cep55 ENCFF002DND, ENCFF198RBJ, ENCFF221NAP, ENCFF502ANK, ENCFF302KQL, ENCFF334XFS, ENCFF369VAI, ENCFF689ZLL, ENCFF830CBI, ENCFF952LUC, DRR091688, DRR091689, DRR091699, SRR6904683, SRR6904684, SRR6904685 chr19 38368317 38368318 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000120254.1, ENSMUSG00000120254 ENCFF017LOD, ENCFF359GCY, ENCFF933KQV, ENCFF935LAF, ENCFF945ICZ, ENCFF062GNP, ENCFF302TQH, ENCFF349AIG, ENCFF720MPJ, ENCFF854IBU, ENCFF904RJF chr19 38626026 38626030 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000024998.18, Plce1 SRR2089616, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089642, SRR2089643, SRR2089646 chr19 38729275 38729276 + Predicted SINE|B2|B3 ENSMUSG00000024998.18, Plce1 SRR2089610, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089642, SRR2089643, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr19 39388865 39388866 - Predicted LINE|L1|L1MdF_III ENSMUSG00000032808.3, Cyp2c38 SRR2089603, SRR2089610, SRR2089614, SRR2089630, SRR2089631, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr19 39390888 39390889 - Predicted LTR|ERVK|RMER12B ENSMUSG00000032808.3, Cyp2c38 SRR2089647, SRR2089648, SRR2089650, SRR2089651 chr19 39836668 39836669 - Predicted SINE|B2|B3A ENSMUSG00000092008.3, Cyp2c69 SRR2089603, SRR2089613, SRR2089642 chr19 39980287 39980288 + Predicted LINE|L1|Lx9 ENSMUSG00000042248.5, Cyp2c37 SRR2089603, SRR2089606, SRR2089609, SRR2089610, SRR2089613, SRR2089615, SRR2089616, SRR2089621, SRR2089623, SRR2089635, SRR2089637, SRR2089639, SRR2089646, SRR2089649 chr19 40255269 40255270 - Predicted SINE|Alu|B1_Mm ENSMUSG00000055044.13, Pdlim1 SRR2089607, SRR2089630, SRR2089641, SRR2089648 chr19 40578300 40578301 + Predicted LINE|L2|L2c ENSMUSG00000097792.3, Gm27042 DRR091693, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198227 chr19 41254624 41254626 - Predicted LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000025016.12, Tm9sf3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR15198218, SRR15198219, SRR15198224, SRR2040601, SRR2927112, SRR2927113 chr19 41463420 41463421 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000120900.1, ENSMUSG00000120900 ENSMUST00000246374.1 ENCFF001RTD, ENCFF001RTN chr19 4319575 4319576 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000034616.18, Ssh3 ENCFF001NDA, ENCFF001NDD, ENCFF002FAG, ENCFF108UNS, ENCFF265LKR, ENCFF279BVM, ENCFF330IYN, ENCFF606EDP, ENCFF622NXP, ENCFF705JRV, ENCFF745HSV, ENCFF755IDE, ENCFF823PZU, ENCFF844KCR, ENCFF881UBL, ENCFF917RNE, ENCFF951UXE, ENCFF982BLT, ENCFF101BDM, ENCFF233IFH, ENCFF962OCF, ENCFF035BBA, ENCFF142PTA, ENCFF167GWU, ENCFF256UWN, ENCFF399TOF, ENCFF450CUC, ENCFF517BAY, ENCFF557JPW, ENCFF595NMM, ENCFF611QZE, ENCFF696TTO, ENCFF848LWJ, ENCFF883APB, ENCFF934QGX, ENCFF953FGT, ENCFF197NCG chr19 44235008 44235009 - Annotated LINE|L1|L1MB5 ENSMUSG00000117900.2, Gm50323 ENSMUST00000236516.2 SRR9178982 chr19 45433905 45433948 + Annotated LINE|L2|X13_LINE ENSMUSG00000025217.16, Btrc ENSMUST00000224439.2, ENSMUST00000224053.2, ENSMUST00000224478.2 ENCFF002ERW, ENCFF181RDS, ENCFF198RBJ, ENCFF426QFT, ENCFF450WAV, ENCFF452AXW, ENCFF489IGD, ENCFF575RUC, ENCFF234LUQ, ENCFF389ZWR, ENCFF565YJQ chr19 46169754 46169755 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000093525.2, Gm8974 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr19 46290154 46290155 + Predicted LTR|ERVK|MYSERV6-int ENSMUSG00000025225.16, Nfkb2 ENCFF064PBF, ENCFF106RGV, ENCFF289WHW, ENCFF432ZLQ, ENCFF896MQK, ENCFF095NMU, ENCFF124SSE, ENCFF237JCE, ENCFF421DHQ, ENCFF483KXD, ENCFF601JTS, ENCFF643SBQ, ENCFF741PLM, ENCFF875BUD, ENCFF927LFD, ENCFF936DQW, ENCFF949QCF, ENCFF984QED, ENCFF986DZE chr19 46290472 46290473 + Predicted LTR|ERVK|MYSERV6-int ENSMUSG00000025225.16, Nfkb2 ENCFF262URV, ENCFF439OFV, ENCFF670YKO, ENCFF771YNG, ENCFF925ONP, ENCFF985BLV, ENCFF003GJV, ENCFF134PXJ, ENCFF137OYQ, ENCFF149BQJ, ENCFF179HJV, ENCFF315HBU, ENCFF414IHO, ENCFF422CQE, ENCFF498OHV, ENCFF517BAY, ENCFF527XBQ, ENCFF685FUZ, ENCFF696QTS, ENCFF742DJH, ENCFF812QQI, ENCFF910CTW, ENCFF951PCM chr19 46290628 46290662 + Predicted LTR|ERVK|MYSERV6-int ENSMUSG00000025225.16, Nfkb2 ENCFF277XPM, ENCFF376MQF, ENCFF439OFV, ENCFF521UGJ, ENCFF570GTP, ENCFF585YYC, ENCFF670YKO, ENCFF710DAI, ENCFF792XYG, ENCFF858CRT, ENCFF881UBL, ENCFF956WVJ, ENCFF012KPC, ENCFF055PZZ, ENCFF057MDU, ENCFF090EUZ, ENCFF098TCZ, ENCFF137OYQ, ENCFF155GUC, ENCFF208BJY, ENCFF228CMT, ENCFF308WGP, ENCFF350PHR, ENCFF371ZDG, ENCFF404HLB, ENCFF406NLL, ENCFF420RGI, ENCFF529LEZ, ENCFF538ZTW, ENCFF548HOL, ENCFF558UDY, ENCFF635XED, ENCFF711OYQ, ENCFF711XWR, ENCFF735BVR, ENCFF750IZJ, ENCFF781XUM, ENCFF804EWD, ENCFF849PKR, ENCFF851JLX, ENCFF910CTW, ENCFF951PCM chr19 46291019 46291020 + Predicted LTR|ERVK|RLTR12C ENSMUSG00000025225.16, Nfkb2 ENCFF056GXQ, ENCFF116MYR, ENCFF138TOM, ENCFF147GLI, ENCFF308LTO, ENCFF641QXI, ENCFF686EWL, ENCFF783MLO, ENCFF793CWJ, ENCFF795DLS, ENCFF931DDH, ENCFF962LFN, ENCFF016CHX, ENCFF039DES, ENCFF106RLX, ENCFF107YGR, ENCFF331YYO, ENCFF363PDR, ENCFF513BRJ, ENCFF565DII, ENCFF699SBZ, ENCFF758BKM, ENCFF781MKK, ENCFF796TQV, ENCFF814PHK, ENCFF821HAZ, ENCFF906CJJ, ENCFF976SMI chr19 46390052 46390053 + Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000025231.18, Sufu SRR2089616, SRR2089620, SRR2089623, SRR2089631 chr19 46958006 46958007 - Annotated SINE|B2|B3A ENSMUSG00000025041.18, Nt5c2 ENSMUST00000235234.2, NM_001164365.2 chr19 47497211 47497212 - Annotated DNA|hAT-Ac|OldhAT1 ENSMUSG00000042694.18, Stn1 ENSMUST00000182873.2 chr19 49832309 49832310 + Predicted LTR|ERVK|RMER6A ENSMUSG00000117697.2, Siah1-ps1 SRR2089623, SRR2089635, SRR2089637, SRR2089639, SRR2089640, SRR2089647, SRR2089649 chr19 53022079 53022080 + Annotated LINE|L1|L1MB8 ENSMUSG00000099988.8, 1700054A03Rik ENSMUST00000235589.2 chr19 53028457 53028459 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000099988.8, 1700054A03Rik DRR091689, DRR091694, DRR091697, DRR091698, DRR091699, SRR10697201, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198220, SRR15198223, SRR15198227, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178990, SRR9178992 chr19 53649425 53649426 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000120152.1, ENSMUSG00000120152 ENSMUST00000241623.1, ENSMUST00000243616.1 ENCFF236TUH, ENCFF920FVY chr19 53989878 53989879 - Predicted LINE|L1|L1MB4 ENSMUSG00000117981.2, 4930484I04Rik DRR091692, DRR091695, DRR091697, SRR11428468, SRR15198218, SRR15198222, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178980, SRR9178985, SRR9178992 chr19 5464905 5464961 + Annotated LINE|L2|L2a ENSMUSG00000086938.11, 4930481A15Rik ENSMUST00000241938.1, ENSMUST00000243959.1, ENSMUST00000241868.1 ENCFF002EZY, ENCFF067UCQ, ENCFF134HVE, ENCFF390NKP, ENCFF467LJD, ENCFF657UWH, ENCFF686KMX, ENCFF714CKE, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF855FCX, ENCFF868WEJ, ENCFF320CXH, ENCFF723MAR, SRR11428470, SRR9178985 chr19 55255049 55255069 + Predicted DNA|hAT-Charlie|Charlie8 ENSMUSG00000024981.7, Acsl5 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178989, SRR9178992 chr19 56415630 56415631 + Annotated SINE|B4|B4A ENSMUSG00000025076.13, Casp7 ENSMUST00000237055.3 chr19 57262370 57262393 + Annotated SINE|Alu|PB1 ENSMUSG00000117684.2, 4930449E18Rik ENSMUST00000237596.2, NR_045319.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr19 5739476 5739477 - Predicted LINE|CR1|L3 ENSMUSG00000054874.13, Pcnx3 ENCFF002FAC, ENCFF114PSQ, ENCFF133PEB, ENCFF147GLI, ENCFF305IXM, ENCFF319INV, ENCFF331WKS, ENCFF367BBB, ENCFF375EMG, ENCFF390QUP, ENCFF528CBF, ENCFF544BEF, ENCFF755IDE, ENCFF793STU, ENCFF865WQE, ENCFF907HVO, ENCFF956WVJ, ENCFF960LQP, ENCFF013CHH, ENCFF444YCN, ENCFF608LAL, ENCFF632LPV, ENCFF657FNE, ENCFF657UWH, ENCFF686KMX, ENCFF714CKE, ENCFF782NPY, ENCFF886BRO, ENCFF912MUD, ENCFF935LAF, ENCFF952BCB, ENCFF030IFE, ENCFF087IUJ, ENCFF094RHV, ENCFF197TJB, ENCFF205CDI, ENCFF320CXH, ENCFF377OQI, ENCFF380LXU, ENCFF390AUP, ENCFF409ABB, ENCFF411KCB, ENCFF543PXT, ENCFF548JDU, ENCFF598PMW, ENCFF713JXV, ENCFF819JGD, ENCFF864DTX, ENCFF955YCX, ENCFF983GRF, ENCFF186VNL, ENCFF319SDE, ENCFF344OJQ, ENCFF582WGH, DRR091694, DRR091696, DRR091697, DRR091699, SRR11428469, SRR13142121, SRR13142122, SRR13142123, SRR15198223, SRR15198224, SRR6338004 chr19 58219516 58219554 + Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000087002.2, Gm16277 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr19 58594761 58594762 + Annotated LTR|ERVK|RLTR9A ENSMUSG00000100001.2, 1810007D17Rik ENSMUST00000187629.2, NR_038136.1 chr19 58718334 58718335 + Annotated LINE|L1|Lx7 ENSMUSG00000042179.7, Pnliprp1 ENSMUST00000235738.2 chr19 61105810 61105811 - Annotated LTR|ERVK|RLTR25A ENSMUSG00000074733.15, Zfp950 ENSMUST00000181469.2 chr19 61109183 61109184 - Predicted LINE|L1|L1MdA_IV ENSMUSG00000074733.15, Zfp950 ENCFF074HUJ, ENCFF313ERY, ENCFF460NGS, ENCFF491XRO, ENCFF519IZA, ENCFF525POD, ENCFF643VPC, ENCFF734FHF, ENCFF931DDH, ENCFF931HCN, ENCFF012HVN, ENCFF013SNI, ENCFF089SWU, ENCFF121IDD, ENCFF124SSE, ENCFF194DAO, ENCFF286GUQ, ENCFF366IEQ, ENCFF403CRC, ENCFF404HLB, ENCFF486GBM, ENCFF791ZDR, ENCFF894COY chr19 61110720 61110721 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000074733.15, Zfp950 ENCFF540XSD, ENCFF581WWO, ENCFF639RWJ, ENCFF794FBC, ENCFF012KPC, ENCFF022ACG, ENCFF043DTH, ENCFF087XKQ, ENCFF531JWM, ENCFF549IDH, ENCFF559QXN, ENCFF750IZJ, ENCFF817NCH chr19 6168825 6168873 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000024790.9, Sac3d1 DRR091688, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091697, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR2040601, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178992 chr19 6171671 6171672 - Annotated SINE|MIR|MIRc ENSMUSG00000024787.15, Snx15 ENSMUST00000124171.8 chr19 6997046 6997047 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000024965.10, Fermt3 ENCFF151QHP, ENCFF221JIC, ENCFF393UZV, ENCFF450WAV, ENCFF524EDD, ENCFF639RWJ, ENCFF691URX, ENCFF874ELO, ENCFF013CHH, ENCFF117ZMM, ENCFF137OYQ, ENCFF169JOQ, ENCFF197JAP, ENCFF219PCN, ENCFF248XZC, ENCFF260BJB, ENCFF276OPJ, ENCFF292KWK, ENCFF394AUR, ENCFF420REU, ENCFF565FFU, ENCFF578YPJ, ENCFF613SEJ, ENCFF681EEO, ENCFF687STH, ENCFF779MMO, ENCFF794MMU, ENCFF817HZQ, ENCFF848LWJ, ENCFF939UBM, ENCFF946LMX, ENCFF976SMI, SRR2927113 chr19 7019111 7019168 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000024966.10, Stip1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697201, SRR10697202, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR6338004, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr19 7274150 7274151 - Predicted LTR|ERVK|RMER4B ENSMUSG00000024969.16, Mark2 ENCFF453XOG, ENCFF497YRP, ENCFF519IZA, ENCFF771YNG, ENCFF012HVN, ENCFF118PQI, ENCFF277JGD, ENCFF417INY, ENCFF450CUC, ENCFF464KYQ, ENCFF562MVN, ENCFF565CON, ENCFF584ZUK, ENCFF597BNT, ENCFF640RWH, ENCFF699SBZ, ENCFF859MTL, ENCFF939QLN, ENCFF951PCM chr19 7274374 7274375 - Predicted LTR|ERVK|RMER4B ENSMUSG00000024969.16, Mark2 SRR15198217, SRR15198218, SRR15198224, SRR15198226, SRR9178982 chr19 7355680 7355681 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000024970.6, Spindoc ENCFF454ZUS, ENCFF654AEJ, ENCFF962OCF, ENCFF008XVO, ENCFF119IHT, ENCFF186VNL, ENCFF302TQH, ENCFF361MLD, ENCFF494ZWE, ENCFF510AYI, ENCFF525QIM, ENCFF847LGC, ENCFF911OIZ chr19 8703147 8703148 + Predicted DNA|hAT-Tag1|hAT-1_Mam ENSMUSG00000108414.3, Snhg1 ENCFF048FGD, ENCFF114PSQ, ENCFF143PHU, ENCFF221NAP, ENCFF327MSM, ENCFF344LNZ, ENCFF452AXW, ENCFF502ANK, ENCFF552NWL, ENCFF836JVX, ENCFF818BAS, ENCFF920FVY, ENCFF085RPW, ENCFF197OUM, ENCFF302KQL, ENCFF334XFS, ENCFF387BVS, ENCFF566HCI, ENCFF829HAB, ENCFF723MAR chr19 8902490 8902491 + Predicted LINE|L1|L1MdF_II ENSMUSG00000071649.7, B3gat3 ENCFF279BVM, ENCFF385MVU, ENCFF403ORF, ENCFF544BEF, ENCFF787LWL, ENCFF794FBC, ENCFF906FNQ, ENCFF144EDQ, ENCFF229CPV, ENCFF239RQP, ENCFF641CYW, ENCFF764AQK, ENCFF883APB, ENCFF997QQG chr19 8954950 8954951 + Predicted LINE|L1|X9_LINE ENSMUSG00000071644.11, Eef1g ENCFF048FGD, ENCFF051JGE, ENCFF089WMB, ENCFF143PHU, ENCFF221NAP, ENCFF452AXW, ENCFF502ANK, ENCFF570KYE, ENCFF575RUC, ENCFF836JVX, ENCFF885AJK, ENCFF888LGA, ENCFF229TCX, ENCFF255XDN, ENCFF302KQL, ENCFF334XFS, ENCFF407JTK, ENCFF538AIM, ENCFF673ZDG, ENCFF894SHM, SRR6904683, SRR6904684, SRR6904685 chr1 100017677 100017678 + Predicted SINE|B4|B4A ENSMUSG00000067028.12, Cntnap5b SRR2089612, SRR2089617, SRR2089619, SRR2089621, SRR2089623, SRR2089632 chr1 101096357 101096358 + Predicted LTR|ERVK|RLTR50B ENSMUSG00000100684.2, Gm20268 SRR2927113, SRR6904683, SRR6904684, SRR6904685 chr1 107614686 107614739 + Annotated LTR|ERVK|RLTR10B2 ENSMUSG00000086161.2, Gm15389 ENSMUST00000153774.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 107900040 107900066 + Predicted LTR|ERVK|RLTR12BD_Mm ENSMUSG00000100457.8, D830032E09Rik DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428470, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 107905307 107905308 + Predicted LTR|ERVK|RLTR42 ENSMUSG00000100457.8, D830032E09Rik DRR091689, SRR15198219, SRR15198221 chr1 108696278 108696279 + Predicted LINE|L1|Lx ENSMUSG00000101097.2, Gm6679 SRR2089636, SRR2089640, SRR2089647, SRR2089651 chr1 113891863 113891864 - Annotated LTR|ERVK|RLTR9E ENSMUSG00000097648.2, 9330185C12Rik ENSMUST00000180837.2 chr1 115758699 115758700 + Predicted SINE|MIR|MIR3 ENSMUSG00000070695.5, Cntnap5a SRR11428468, SRR11428469, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR9178991 chr1 11893170 11893213 + Predicted LTR|ERVK|RLTR10B ENSMUSG00000057715.14, A830018L16Rik DRR091690, DRR091691, DRR091697, DRR091699, SRR11428470, SRR15198217, SRR15198218, SRR15198221, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643192, SRR9080663 chr1 119723377 119723378 + Predicted LTR|ERVK|LTR10_RN ENSMUSG00000100436.2, Gm29657 SRR2089623, SRR2089629, SRR2089631, SRR2089632, SRR2089634 chr1 119925878 119925879 - Predicted LINE|L1|Lx8 ENSMUSG00000036962.13, Cfap221 SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR11428469, SRR11428470, SRR9178982, SRR9178985 chr1 12042271 12042272 + Predicted LTR|LTR|LTR91A ENSMUSG00000057715.14, A830018L16Rik ENCFF269SRJ, ENCFF308FEA, ENCFF721BNO, SRR2927112 chr1 121414679 121414706 + Predicted SINE|B2|B3A ENSMUSG00000026339.19, Ccdc93 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR6338004, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 125372304 125372305 + Annotated LTR|ERVL-MaLR|MLT1J ENSMUSG00000102063.2, Gm28706 ENSMUST00000186830.2 chr1 127198305 127198313 + Predicted LTR|ERV1|RMER5 ENSMUSG00000036155.14, Mgat5 ENCFF163LPQ, ENCFF321BMO, ENCFF326TQL, ENCFF552NWL, ENCFF565YHF, ENCFF595GFM, ENCFF813GGJ, ENCFF996STG, ENCFF023TPS, ENCFF027GBM, ENCFF127KHN, ENCFF177SGB, ENCFF205CDI, ENCFF220GKL, ENCFF267KZS, ENCFF286GUQ, ENCFF315OFF, ENCFF357QTB, ENCFF369VAI, ENCFF426ETE, ENCFF430ERW, ENCFF490ULA, ENCFF517EJZ, ENCFF606XHA, ENCFF749XRU, ENCFF751QWY, ENCFF817HZQ, ENCFF863LMG, ENCFF903ULI chr1 12741648 12741668 - Predicted DNA|DNA|UCON78 ENSMUSG00000101314.2, Gm29663 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091695, DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 127660299 127660300 - Annotated DNA|hAT-Charlie|RCHARR1 ENSMUSG00000121232.1, ENSMUSG00000121232 ENSMUST00000247534.1 ENCFF001RTN chr1 130657340 130657383 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000026409.15, ENSMUSG00000101904.2, Pfkfb2, Gm29427 DRR091688, DRR091689, DRR091691, DRR091694, DRR091697, DRR091699, SRR10697198, SRR10697203, SRR13142118, SRR13142121, SRR13142122, SRR15198218, SRR15198220, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR6338004, SRR9080662, SRR9178981, SRR9178982, SRR9178985 chr1 130657465 130657466 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000026409.15, Pfkfb2 DRR091688, DRR091689, DRR091691, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697198, SRR10697203, SRR13142118, SRR13142121, SRR13142122, SRR15198220, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR6338004, SRR9080662, SRR9080666, SRR9178981 chr1 131204449 131204450 - Annotated SINE|MIR|MIRb ENSMUSG00000042349.14, Ikbke ENSMUST00000159195.2 chr1 131757750 131757751 + Predicted LTR|ERVK|RLTR12BD_Mm ENSMUSG00000013275.10, Slc41a1 ENCFF002EZY, ENCFF002FAC, ENCFF450WAV, SRR9080664 chr1 132154022 132154093 + Annotated DNA|DNA|UCON78 ENSMUSG00000079330.11, Lemd1 ENSMUST00000185436.7, ENSMUST00000187339.7, ENSMUST00000189086.3, NM_001311103.1, NM_001311102.1, NR_132336.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 132958298 132958325 - Annotated LTR|ERVK|RMER4A ENSMUSG00000054387.14, Mdm4 ENSMUST00000190807.2, NM_001302802.1 chr1 133595752 133595753 + Annotated LTR|ERVK|RLTR12D ENSMUSG00000120455.1, ENSMUSG00000120455 ENSMUST00000243419.1 chr1 133905262 133905263 + Annotated LTR|Gypsy|LTR85c ENSMUSG00000120798.1, ENSMUSG00000120798 ENSMUST00000245856.1 chr1 134038980 134038981 + Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000026450.15, Chit1 ENSMUST00000159963.8, ENSMUST00000160060.8, NM_001284524.1, NM_027979.2, NM_001284525.1 chr1 134333025 134333036 + Predicted LTR|ERVK|RLTRETN_Mm ENSMUSG00000026456.19, Cyb5r1 ENCFF027IIP, ENCFF162UVS, ENCFF206EGD, ENCFF308LTO, ENCFF319INV, ENCFF348VIH, ENCFF489VZI, ENCFF522VLI, ENCFF554PUC, ENCFF621PKT, ENCFF670YKO, ENCFF691URX, ENCFF771LLL, ENCFF906FNQ, ENCFF234LUQ, ENCFF222MKT, ENCFF255ESE, ENCFF275TCB, ENCFF306FQJ, ENCFF378TYU, ENCFF397ZQU, ENCFF409ABB, ENCFF422CQE, ENCFF437QAE, ENCFF460FON, ENCFF598PMW, ENCFF698WQO, ENCFF820JMO, ENCFF916JWW, ENCFF946LMX, ENCFF477YHR, DRR091698, SRR15198224, SRR15198225, SRR2927111 chr1 135561772 135561773 - Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000009418.17, Nav1 ENCFF104LLO, ENCFF345OIF, ENCFF504ULZ, ENCFF514BEA, ENCFF082BJV, ENCFF267KZS, ENCFF338LFG, ENCFF611OFH, ENCFF723QWN, ENCFF751QWY, ENCFF781MKK, ENCFF830CBI, ENCFF877VSZ, ENCFF886UAF chr1 135656086 135656087 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000026421.15, Csrp1 ENCFF027IIP, ENCFF106RGV, ENCFF133PEB, ENCFF552NWL, ENCFF621PKT, ENCFF643VPC, ENCFF941QCZ, ENCFF985BLV, ENCFF019PVP, ENCFF052RNG, ENCFF222MKT, ENCFF255ESE, ENCFF378TYU, ENCFF397ZQU, ENCFF421DHQ, ENCFF661TOM, ENCFF932XKS chr1 135935957 135935958 + Annotated LINE|L2|L2c NM_001160145.1 chr1 135943079 135943081 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000026411.18, Tmem9 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR9080664, SRR9080666, SRR9178976, SRR9178985, SRR9178986 chr1 136044994 136044995 + Annotated DNA|hAT-Charlie|MER5B ENSMUSG00000026407.18, Cacna1s ENSMUST00000159106.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF945ICZ chr1 13659975 13660165 - Annotated LTR|Gypsy|LTR88c ENSMUSG00000025935.11, Tram1 ENSMUST00000027068.11, ENSMUST00000188377.2, NM_028173.5 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DMZ, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048FGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF075MGH, ENCFF083BIG, ENCFF084PUC, ENCFF089PFT, ENCFF089WMB, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF106GQS, ENCFF106RGV, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF133PEB, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF143PHU, ENCFF159OVE, ENCFF163LPQ, ENCFF168WHQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF198RBJ, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF269UZL, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF283XKV, ENCFF289WHW, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF321BMO, ENCFF326TQL, ENCFF327MSM, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF443PSO, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF452AXW, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489IGD, ENCFF489VZI, ENCFF495YGN, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521IDK, ENCFF521UGJ, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF544BEF, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF564OKH, ENCFF564YPB, ENCFF570KYE, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF605IFN, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF654BXL, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF686EWL, ENCFF696TCH, ENCFF704GEB, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF764EJV, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF793CWJ, ENCFF793IYH, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF828WIK, ENCFF836JVX, ENCFF841OXD, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF868XLZ, ENCFF874ELO, ENCFF878SQO, ENCFF880FYC, ENCFF884TJE, ENCFF885AJK, ENCFF886XAI, ENCFF888HEF, ENCFF888LGA, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF907HVO, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF956WVJ, ENCFF970JWC, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF233IFH, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF014CMK, ENCFF015JJB, ENCFF019PVP, ENCFF023TPS, ENCFF027GBM, ENCFF027GCQ, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF061WTN, ENCFF065ZIE, ENCFF066MTU, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077YZF, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF095NMU, ENCFF103SQR, ENCFF116DGU, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF127DCC, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197OUM, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF222MKT, ENCFF228CMT, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF243LBQ, ENCFF243TPB, ENCFF249LSC, ENCFF255ESE, ENCFF258WLS, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302KQL, ENCFF302MXO, ENCFF303BIV, ENCFF306OWL, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF334XFS, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF347EUO, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF371ZDG, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF383AJS, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399YLV, ENCFF406LFV, ENCFF406NLL, ENCFF407JTK, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF414IHO, ENCFF417OEG, ENCFF421DHQ, ENCFF422CQE, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF538AIM, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF552LXG, ENCFF558UDY, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF598BFX, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF647KBV, ENCFF647RUH, ENCFF655CUI, ENCFF656DRS, ENCFF661TOM, ENCFF672WYO, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF689ZLL, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF698WQO, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF780UQU, ENCFF781MKK, ENCFF782CNW, ENCFF789AOM, ENCFF790WIY, ENCFF796TQV, ENCFF801SNQ, ENCFF804EWD, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF817HZQ, ENCFF819JGD, ENCFF821HAZ, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF849PKR, ENCFF855UFX, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF906CJJ, ENCFF921PGH, ENCFF926FRX, ENCFF927LFD, ENCFF928YDQ, ENCFF932XKS, ENCFF934VFW, ENCFF937KFC, ENCFF938XTE, ENCFF946LMX, ENCFF949QCF, ENCFF952EQQ, ENCFF952FJN, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF994PPZ, ENCFF998BIQ, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF667KKO, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR2040601, SRR2927111, SRR2927112, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 13663819 13663820 + Annotated LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000120948.1, ENSMUSG00000120948 ENSMUST00000246625.1 ENCFF001NCR chr1 137253579 137253580 - Annotated LTR|ERVL-MaLR|ORR1G ENSMUSG00000102738.2, 1700006P03Rik ENSMUST00000191810.2 chr1 139307053 139307054 - Predicted Retroposon|L1-dep|RMER1A ENSMUSG00000063681.15, Crb1 DRR091690, DRR091692, DRR091694, DRR091697, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR15198217, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927113, SRR9178976 chr1 139411264 139411265 + Annotated LTR|ERVL-MaLR|MTB ENSMUSG00000033952.15, Aspm ENSMUST00000196272.2 chr1 150267478 150267479 - Predicted SINE|MIR|MIR ENSMUSG00000006010.15, Odr4 SRR2089618, SRR2089620, SRR2089623, SRR2089629, SRR2089634, SRR2089645 chr1 150578411 150578416 - Predicted SINE|B4|B4 ENSMUSG00000066842.19, Hmcn1 SRR2089604, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641 chr1 150663763 150663764 - Predicted LINE|L1|L1MA4 ENSMUSG00000066842.19, Hmcn1 SRR2089636, SRR2089647, SRR2089649, SRR2089651 chr1 150839654 150839655 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000066842.19, Hmcn1 SRR2089605, SRR2089617, SRR2089619, SRR2089649, SRR2089651 chr1 151377584 151377598 - Predicted LTR|ERVL|MT2B1 ENSMUSG00000026484.14, Rnf2 ENCFF051JSS, ENCFF094CCP, ENCFF125HRQ, ENCFF262URV, ENCFF287KDR, ENCFF296ASE, ENCFF297BEX, ENCFF514BEA, ENCFF521UGJ, ENCFF527VIY, ENCFF589MBR, ENCFF933UPG, ENCFF951MOU, ENCFF022ACG, ENCFF027GBM, ENCFF120SMK, ENCFF148BPZ, ENCFF174EGP, ENCFF178ZXW, ENCFF243TPB, ENCFF315OFF, ENCFF382VCK, ENCFF394AUR, ENCFF426ETE, ENCFF440IAL, ENCFF458EUS, ENCFF464KYQ, ENCFF513BRJ, ENCFF627XGF, ENCFF647KBV, ENCFF668SQN, ENCFF680WIN, ENCFF779MMO, ENCFF830CBI, ENCFF834TQY, ENCFF872SFD, ENCFF900AIQ, SRR9178988 chr1 151384775 151384787 - Predicted SINE|Alu|B1_Mur2 ENSMUSG00000026484.14, Rnf2 ENCFF027IIP, ENCFF083CUR, ENCFF265LKR, ENCFF273TLO, ENCFF400XLQ, ENCFF525POD, ENCFF647ICR, ENCFF654BXL, ENCFF823PZU, ENCFF956WVJ, ENCFF960LQP, ENCFF008YSM, ENCFF098TCZ, ENCFF169JOQ, ENCFF208BJY, ENCFF220GKL, ENCFF221ZQB, ENCFF255ESE, ENCFF255XDN, ENCFF271RFU, ENCFF303BIV, ENCFF378TYU, ENCFF426ZCK, ENCFF462HZM, ENCFF483SQS, ENCFF536ZFC, ENCFF672WYO, ENCFF781XUM, ENCFF812LAI, ENCFF816CPX, ENCFF853PNO, ENCFF859MTL, ENCFF916BSM chr1 151384875 151384876 - Predicted SINE|Alu|B1_Mm ENSMUSG00000026484.14, Rnf2 ENCFF027IIP, ENCFF265LKR, ENCFF273TLO, ENCFF400XLQ, ENCFF525POD, ENCFF647ICR, ENCFF823PZU, ENCFF956WVJ, ENCFF960LQP, ENCFF008YSM, ENCFF098TCZ, ENCFF169JOQ, ENCFF208BJY, ENCFF220GKL, ENCFF221ZQB, ENCFF255ESE, ENCFF255XDN, ENCFF271RFU, ENCFF303BIV, ENCFF310HAL, ENCFF378TYU, ENCFF426ZCK, ENCFF462HZM, ENCFF483SQS, ENCFF536ZFC, ENCFF661TOM, ENCFF672WYO, ENCFF781XUM, ENCFF812LAI, ENCFF853PNO, ENCFF859MTL, ENCFF916BSM chr1 151426693 151426701 - Annotated DNA|DNA|MER126 ENSMUSG00000100357.2, Gm28181 ENSMUST00000191460.2 DRR091690, DRR091691, DRR091693, DRR091695, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR11428467, SRR15198220, SRR15198224, SRR6338004, SRR9178976, SRR9178979, SRR9178982, SRR9178987, SRR9178992 chr1 151931040 151931056 - Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000032666.17, 1700025G04Rik ENSMUST00000121533.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR6904684, SRR6904685, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 151931136 151931137 - Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000032666.17, 1700025G04Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR6904684, SRR6904685, SRR9080663, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 152675904 152675946 + Annotated LTR|ERVL|RMER10A ENSMUSG00000026480.13, Ncf2 ENSMUST00000186568.7, NM_010877.5 ENCFF198RBJ chr1 153283535 153283536 - Annotated LTR|ERVK|RLTR10A ENSMUSG00000073538.12, E330020D12Rik ENSMUST00000186785.7 ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF712DGP, ENCFF935LAF, ENCFF945ICZ, ENCFF248ELC, ENCFF349AIG, SRR2040601 chr1 153289978 153289981 - Annotated LTR|ERVK|RLTR27 ENSMUSG00000073538.12, E330020D12Rik ENSMUST00000188717.2, ENSMUST00000241781.1, NR_033736.1 ENCFF001NCP, ENCFF001NCR, ENCFF874ELO, ENCFF234LUQ, ENCFF671TUD chr1 153625172 153625173 + Annotated LTR|ERV1|MER90 ENSMUSG00000066800.12, Rnasel ENSMUST00000086209.10, NM_011882.2 ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF059IQN, ENCFF426QFT, ENCFF199IRM, ENCFF270ERO, ENCFF962FIU, ENCFF964WZW, ENCFF052RNG, ENCFF429ZEH, ENCFF591WVP, ENCFF008XVO, ENCFF269AST, ENCFF361MLD, ENCFF510AYI, SRR15198228, SRR2927111, SRR6338004 chr1 153625250 153625251 + Annotated LTR|ERV1|MER90 ENSMUSG00000066800.12, Rnasel ENSMUST00000182722.8 ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF059IQN, ENCFF426QFT, ENCFF962FIU, ENCFF964WZW, ENCFF052RNG, ENCFF429ZEH, ENCFF591WVP, ENCFF008XVO, ENCFF269AST, ENCFF361MLD, ENCFF510AYI, SRR15198228, SRR6338004 chr1 153627206 153627207 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000066800.12, Rnasel ENCFF001NDZ, ENCFF002DMZ, ENCFF002FAC, ENCFF284OMO, ENCFF491XRO, ENCFF544BEF, ENCFF683RFI, ENCFF844QDN, ENCFF941QCZ, ENCFF195JLT, ENCFF012KPC, ENCFF177LXI, ENCFF194DAO, ENCFF347EUO, ENCFF357AGP, ENCFF376PQU, ENCFF647KBV, ENCFF881DTW, ENCFF900AIQ, ENCFF921PGH, ENCFF958LRX chr1 153663276 153663277 - Predicted LTR|ERVL-MaLR|MTE-int ENSMUSG00000042641.20, Rgsl1 SRR2089610, SRR2089616, SRR2089621, SRR2089636, SRR2089638, SRR2089643 chr1 153764945 153764946 + Predicted LTR|ERVK|RMER12 ENSMUSG00000047053.6, Teddm1a SRR2089611, SRR2089614, SRR2089635, SRR2089636, SRR2089637, SRR2089640, SRR2089650 chr1 153881924 153881965 - Predicted LINE|L1|L1MC3 ENSMUSG00000101903.2, Gm29291 ENSMUST00000188927.2 ENCFF048IBL, ENCFF059IQN, ENCFF074HTO, ENCFF116MYR, ENCFF274WSX, ENCFF297BEX, ENCFF310HPH, ENCFF344ILW, ENCFF345OIF, ENCFF504ULZ, ENCFF514JOV, ENCFF528CBF, ENCFF796NHQ, ENCFF841OXD, ENCFF933UPG, ENCFF004AEL, ENCFF027GBM, ENCFF053NFR, ENCFF056UGH, ENCFF080REY, ENCFF088SVK, ENCFF120SMK, ENCFF126WDH, ENCFF187BHR, ENCFF197TJB, ENCFF243TPB, ENCFF267KZS, ENCFF315OFF, ENCFF321NRW, ENCFF338LFG, ENCFF341YZB, ENCFF357QTB, ENCFF390ZZH, ENCFF397MUI, ENCFF408FFP, ENCFF426ETE, ENCFF430ERW, ENCFF482VRF, ENCFF517EJZ, ENCFF598WAL, ENCFF609WDV, ENCFF637CVI, ENCFF673GRZ, ENCFF689RQK, ENCFF705CES, ENCFF723QWN, ENCFF749XRU, ENCFF751QWY, ENCFF772QLP, ENCFF838BEV, ENCFF869DVY, ENCFF871CMC, ENCFF886UAF, ENCFF921PGH, ENCFF953WBM, ENCFF955YCX, ENCFF960QTC, ENCFF970LRH chr1 154692686 154692687 - Annotated SINE|MIR|MIR ENSMUSG00000004110.18, Cacna1e ENSMUST00000188965.7, ENSMUST00000238369.2 chr1 155258909 155258910 - Predicted LINE|L1|L1MC3 ENSMUSG00000026469.15, Xpr1 SRR2089605, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr1 155265954 155265955 - Predicted LINE|L1|Lx8b ENSMUSG00000026469.15, Xpr1 SRR2089606, SRR2089623, SRR2089648, SRR2089650 chr1 155914482 155914671 - Predicted SINE|B4|ID_B1 ENSMUSG00000026466.17, Tor1aip1 ENCFF005NBP, ENCFF107XGE, ENCFF126RJS, ENCFF130KZZ, ENCFF136POG, ENCFF160HKC, ENCFF192NVI, ENCFF198NQV, ENCFF221JIC, ENCFF234MZC, ENCFF265LKR, ENCFF334RGJ, ENCFF349LIW, ENCFF363XWU, ENCFF385GUJ, ENCFF422ATU, ENCFF453XOG, ENCFF460NGS, ENCFF497YRP, ENCFF519IZA, ENCFF540XSD, ENCFF544BEF, ENCFF589MBR, ENCFF606EDP, ENCFF608NVM, ENCFF622NXP, ENCFF639RWJ, ENCFF667FDW, ENCFF672HUA, ENCFF705JRV, ENCFF743RQJ, ENCFF780TUN, ENCFF783MLO, ENCFF794FBC, ENCFF823PZU, ENCFF844QDN, ENCFF858CTQ, ENCFF863RVB, ENCFF902GVX, ENCFF913CFN, ENCFF917RNE, ENCFF934ULS, ENCFF942WIP, ENCFF960LQP, ENCFF013HYW, ENCFF935LAF, ENCFF967NOO, ENCFF003GJV, ENCFF006JHA, ENCFF012HVN, ENCFF013SNI, ENCFF019PWU, ENCFF027QGO, ENCFF028XDY, ENCFF030IFE, ENCFF043DTH, ENCFF065UBR, ENCFF066MTU, ENCFF066UDR, ENCFF067OYG, ENCFF068CQU, ENCFF077YZF, ENCFF078CCF, ENCFF080DNG, ENCFF087OKI, ENCFF087XKQ, ENCFF090EUZ, ENCFF098AYQ, ENCFF111MWQ, ENCFF118PQI, ENCFF124SSE, ENCFF127KHN, ENCFF134VWD, ENCFF136TYP, ENCFF142PTA, ENCFF143RTP, ENCFF151XBP, ENCFF192XJA, ENCFF197JAP, ENCFF198XFF, ENCFF201IQS, ENCFF207HZS, ENCFF209LBA, ENCFF233RGQ, ENCFF261EQP, ENCFF271RFU, ENCFF276OPJ, ENCFF286GUQ, ENCFF286RSE, ENCFF303BIV, ENCFF308WGP, ENCFF311MZV, ENCFF319YFJ, ENCFF328TJH, ENCFF343MZH, ENCFF347EUO, ENCFF353SEU, ENCFF366IEQ, ENCFF370VOV, ENCFF376PQU, ENCFF386HCR, ENCFF394AUR, ENCFF397ZQU, ENCFF403CRC, ENCFF406NLL, ENCFF409ABB, ENCFF414IHO, ENCFF420REU, ENCFF420RGI, ENCFF423GTP, ENCFF427YDU, ENCFF429ZEH, ENCFF437QAE, ENCFF439HXQ, ENCFF440IAL, ENCFF453MPR, ENCFF456GLS, ENCFF464KYQ, ENCFF468RDR, ENCFF477MBL, ENCFF478MHH, ENCFF498OHV, ENCFF505YPK, ENCFF515GXB, ENCFF516QKR, ENCFF519AKK, ENCFF524FJG, ENCFF536ZFC, ENCFF537DSI, ENCFF538AIM, ENCFF538ZTW, ENCFF543GNI, ENCFF549IDH, ENCFF549KAB, ENCFF572SQL, ENCFF587HBC, ENCFF593TQB, ENCFF595NMM, ENCFF603QSQ, ENCFF611QZE, ENCFF612KDP, ENCFF613SEJ, ENCFF618PVF, ENCFF632HDE, ENCFF635XED, ENCFF644EGG, ENCFF655CUI, ENCFF655KBW, ENCFF658NHH, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF673BPE, ENCFF673SLO, ENCFF706BUS, ENCFF711XWR, ENCFF756QJD, ENCFF772QLP, ENCFF781XUM, ENCFF786BUI, ENCFF794MMU, ENCFF825JNK, ENCFF829HAB, ENCFF829WND, ENCFF840EFC, ENCFF861RRQ, ENCFF863ENS, ENCFF869MFM, ENCFF875BUD, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF894COY, ENCFF900LFN, ENCFF904KCQ, ENCFF908MGO, ENCFF916BSM, ENCFF934QGX, ENCFF936LNA, ENCFF939UBM, ENCFF953FGT, ENCFF956RCJ, ENCFF962ZCT, ENCFF970PLY, ENCFF971DTR, ENCFF974XWJ, ENCFF984QED, ENCFF996WVL, ENCFF720MPJ, SRR9080664, SRR9080665 chr1 156132525 156132535 - Predicted LTR|ERVL-MaLR|MTE2a ENSMUSG00000060985.16, Tdrd5 DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr1 156227559 156227560 - Annotated LTR|ERVK|RLTR51A_Mm ENSMUSG00000026601.16, Axdnd1 ENSMUST00000027895.8 chr1 156282860 156282861 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000103199.2, Gm37648 ENSMUST00000192072.2 SRR2040601 chr1 15874583 15874601 + Predicted LTR|ERVK|RLTR11A2 ENSMUSG00000025925.15, Terf1 DRR091689, DRR091690, DRR091691, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr1 158961836 158961864 + Annotated LINE|L1|Lx8b ENSMUSG00000104014.2, 4930562F17Rik ENSMUST00000195279.2 DRR091691, DRR091692, DRR091693, DRR091696, DRR091698, DRR091699, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6904684, SRR9080664, SRR9080666, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986 chr1 159898271 159898272 + Predicted LINE|L1|Lx9 ENSMUSG00000090394.9, 4930523C07Rik ENCFF002DMZ, ENCFF002ERU, ENCFF089WMB, ENCFF437AJW, ENCFF502ANK, ENCFF885AJK, ENCFF510LAE, ENCFF596QWT, ENCFF768ZCF, ENCFF334XFS, ENCFF346HDC, ENCFF689ZLL, ENCFF894SHM, SRR6904684, SRR6904685 chr1 160041842 160041843 - Predicted LTR|ERV1|RLTR23 ENSMUSG00000014226.11, Cacybp DRR091689, DRR091691, DRR091692, DRR091693, DRR091695, SRR10697198, SRR10697202, SRR11428470, SRR2040601, SRR9178984, SRR9178985, SRR9178988, SRR9178989, SRR9178990 chr1 160292161 160292163 - Predicted SINE|Alu|B1F ENSMUSG00000026721.17, Rabgap1l SRR2089603, SRR2089616, SRR2089620, SRR2089622, SRR2089629, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089647, SRR2089651 chr1 160323536 160323537 - Predicted SINE|B4|RSINE1 ENSMUSG00000026721.17, Rabgap1l SRR2089635, SRR2089636, SRR2089648 chr1 160814657 160814658 + Annotated SINE|B4|ID_B1 ENSMUSG00000026715.13, Serpinc1 ENSMUST00000194777.2 chr1 161705387 161705388 + Annotated LTR|ERVL|RMER10A ENSMUSG00000120750.1, ENSMUSG00000120750 ENSMUST00000245551.1 ENCFF001NDD, SRR9080663 chr1 163906931 163906966 + Predicted SINE|B2|B3A ENSMUSG00000026581.15, Sell DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 16673143 16673144 - Predicted SINE|B2|B3 ENSMUSG00000025939.20, Ube2w ENCFF308FEA, ENCFF657FNE, ENCFF725ATS, ENCFF945ICZ, ENCFF967NOO, ENCFF209LBA, ENCFF014SLC, ENCFF119IHT, ENCFF399XUL, ENCFF499GDC, ENCFF970VKL chr1 167443901 167443903 + Predicted LTR|ERVL|MLT2D ENSMUSG00000015843.11, Rxrg DRR091691, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR9178979, SRR9178982, SRR9178985 chr1 170753212 170753213 - Annotated LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000089838.2, Gm2962 ENSMUST00000159266.2 chr1 170807332 170807337 + Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000104340.3, Gm10522 ENSMUST00000244575.1, ENSMUST00000247291.1, ENSMUST00000246919.1 chr1 171131723 171131724 - Predicted LTR|ERVL|MT2C_Mm ENSMUSG00000062963.11, Ufc1 DRR091690, DRR091691, DRR091693, DRR091697, DRR091699, SRR10697196, SRR10697197, SRR10697199, SRR10697203, SRR11428470, SRR15198221, SRR9080662, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 171687919 171687987 + Predicted LINE|L1|L1MdA_I ENSMUSG00000038147.15, Cd84 ENCFF074HUJ, ENCFF107XGE, ENCFF130KZZ, ENCFF162UVS, ENCFF168WHQ, ENCFF196PBF, ENCFF264RIV, ENCFF265LKR, ENCFF269UZL, ENCFF283XKV, ENCFF284OMO, ENCFF312CZB, ENCFF313ERY, ENCFF321BMO, ENCFF322VJD, ENCFF330LWU, ENCFF348VIH, ENCFF385MVU, ENCFF400XLQ, ENCFF439OFV, ENCFF489VZI, ENCFF525POD, ENCFF554PUC, ENCFF605IFN, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF698LQF, ENCFF745HSV, ENCFF787LWL, ENCFF789LUC, ENCFF812CUD, ENCFF823PZU, ENCFF881UBL, ENCFF902GVX, ENCFF941QCZ, ENCFF942WIP, ENCFF970JWC, ENCFF970XZM, ENCFF012KPC, ENCFF024CUG, ENCFF035BBA, ENCFF055PZZ, ENCFF060FGD, ENCFF065UBR, ENCFF066MTU, ENCFF088PZI, ENCFF089SWU, ENCFF090EUZ, ENCFF111MWQ, ENCFF121IDD, ENCFF124SSE, ENCFF133PKQ, ENCFF134PXJ, ENCFF151XBP, ENCFF163GEC, ENCFF167GWU, ENCFF174EGP, ENCFF184ALY, ENCFF220GKL, ENCFF221ZQB, ENCFF229CPV, ENCFF237HDL, ENCFF237JCE, ENCFF247VEN, ENCFF255XDN, ENCFF256UWN, ENCFF260BJB, ENCFF260UQJ, ENCFF275TCB, ENCFF276OPJ, ENCFF286GUQ, ENCFF292KWK, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF310HAL, ENCFF315HBU, ENCFF331YYO, ENCFF347EUO, ENCFF370VOV, ENCFF374VAZ, ENCFF386CRY, ENCFF386HCR, ENCFF399TOF, ENCFF404HLB, ENCFF427YDU, ENCFF456GLS, ENCFF483SQS, ENCFF485GFE, ENCFF486BJT, ENCFF486GBM, ENCFF505YPK, ENCFF522KWW, ENCFF537DSI, ENCFF585CYT, ENCFF598PMW, ENCFF613YNK, ENCFF643SBQ, ENCFF669PMR, ENCFF673BPE, ENCFF711OYQ, ENCFF724VJN, ENCFF726YTS, ENCFF753HNF, ENCFF758BKM, ENCFF770WIT, ENCFF786BUI, ENCFF804EWD, ENCFF812QQI, ENCFF817HZQ, ENCFF854LJN, ENCFF883APB, ENCFF894COY, ENCFF896XAZ, ENCFF899EJT, ENCFF903ULI, ENCFF916JWW, ENCFF917KUH, ENCFF926IDV, ENCFF931NMQ, ENCFF938CNS, ENCFF970PLY, ENCFF974XWJ, ENCFF976SMI, ENCFF985NHB, ENCFF986DZE, ENCFF996AOW, ENCFF997QQG chr1 171719221 171719222 - Predicted LTR|ERVK|RLTR45-int ENSMUSG00000104413.3, Gm37065 SRR2089603, SRR2089622, SRR2089630, SRR2089641 chr1 171759124 171759125 + Annotated SINE|Alu|PB1D10 ENSMUSG00000015314.11, Slamf6 ENSMUST00000193311.2 chr1 172218555 172218556 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000102278.2, Gm37145 ENSMUST00000193540.2 ENCFF001NCP, ENCFF001RTF, ENCFF001RTJ chr1 172262862 172262882 + Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000103357.2, Gm7804 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR13142118, SRR13142119, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178988 chr1 172757611 172757612 + Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000120753.1, ENSMUSG00000120753 ENSMUST00000245598.1 chr1 173248072 173248182 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000037860.16, Aim2 ENSMUST00000173023.2, NM_001013779.2 ENCFF001NCP, ENCFF001NDA, ENCFF001NDD, ENCFF001RTD, ENCFF001RTF, ENCFF002ERU, ENCFF002ERW, ENCFF051JGE, ENCFF089PFT, ENCFF090USB, ENCFF094CCP, ENCFF102BWR, ENCFF104LLO, ENCFF115KZV, ENCFF159OVE, ENCFF163LPQ, ENCFF189WYV, ENCFF214IUN, ENCFF221NAP, ENCFF261OTH, ENCFF262URV, ENCFF274WSX, ENCFF296ASE, ENCFF305IXM, ENCFF310HPH, ENCFF326TQL, ENCFF327MSM, ENCFF344ILW, ENCFF345OIF, ENCFF381JXP, ENCFF390QUP, ENCFF437AJW, ENCFF470MXU, ENCFF495YGN, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF521IDK, ENCFF564OKH, ENCFF725RXU, ENCFF796NHQ, ENCFF813GGJ, ENCFF851ESH, ENCFF878SQO, ENCFF931PFF, ENCFF989HJD, ENCFF996STG, ENCFF013HYW, ENCFF017LOD, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF359GCY, ENCFF712DGP, ENCFF933KQV, ENCFF935LAF, ENCFF945ICZ, ENCFF970VKB, ENCFF002SZY, ENCFF009AON, ENCFF027GBM, ENCFF037GFB, ENCFF050CMF, ENCFF056UGH, ENCFF057FFG, ENCFF073RJJ, ENCFF083IRL, ENCFF088SVK, ENCFF094RHV, ENCFF126WDH, ENCFF128CYW, ENCFF163DKN, ENCFF172DMS, ENCFF178ZXW, ENCFF187BHR, ENCFF205CDI, ENCFF235HER, ENCFF267KZS, ENCFF278JAU, ENCFF280LCC, ENCFF296UDD, ENCFF302MXO, ENCFF306OWL, ENCFF321NRW, ENCFF338LFG, ENCFF359DNK, ENCFF380LXU, ENCFF390AUP, ENCFF390ZZH, ENCFF407JTK, ENCFF411KCB, ENCFF430ERW, ENCFF458EUS, ENCFF459TYQ, ENCFF482VRF, ENCFF487OHM, ENCFF490ULA, ENCFF505WKA, ENCFF530DUT, ENCFF536ZVF, ENCFF538AIM, ENCFF543PXT, ENCFF565YJQ, ENCFF581RIR, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF615ULR, ENCFF656DRS, ENCFF689RQK, ENCFF693POR, ENCFF696XZL, ENCFF712BKP, ENCFF716NXU, ENCFF727EPG, ENCFF737VKP, ENCFF743NNG, ENCFF749XRU, ENCFF751QWY, ENCFF811ZQO, ENCFF830CBI, ENCFF855UFX, ENCFF863LMG, ENCFF871CMC, ENCFF872SFD, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF938XTE, ENCFF952LUC, ENCFF953POL, ENCFF956ZKG, ENCFF959CWA, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF983GRF, ENCFF014SLC, ENCFF062GNP, ENCFF178HDG, ENCFF186VNL, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF349AIG, ENCFF442OKF, ENCFF477YHR, ENCFF574YMK, ENCFF582WGH, ENCFF653QJY, ENCFF671TUD, ENCFF720MPJ, ENCFF854IBU chr1 173397677 173397678 - Predicted LTR|ERVK|ERVB2_1-I_MM ENSMUSG00000073491.12, Ifi213 ENCFF212JFB, ENCFF403ORF, ENCFF876MJS, ENCFF008YSM, ENCFF087OKI, ENCFF346NGU, ENCFF407JTK, ENCFF423GTP, ENCFF646GBS, ENCFF663SPA, ENCFF673SLO, ENCFF746ZCS chr1 173401168 173401169 - Predicted LTR|ERVK|IAPEy-int ENSMUSG00000073491.12, Ifi213 ENCFF105KSL, ENCFF192NVI, ENCFF262WAE, ENCFF269UZL, ENCFF273TLO, ENCFF367BBB, ENCFF443PSO, ENCFF453XOG, ENCFF472YPG, ENCFF525POD, ENCFF544BEF, ENCFF723QIC, ENCFF931HCN, ENCFF016CHX, ENCFF043DTH, ENCFF064VAD, ENCFF167GWU, ENCFF179HJV, ENCFF219PCN, ENCFF328TJH, ENCFF335UNU, ENCFF346UBA, ENCFF438ROC, ENCFF443URE, ENCFF565FFU, ENCFF613YNK, ENCFF696QTS, ENCFF810SCH, ENCFF866IHG, ENCFF904KCQ, ENCFF946LMX, ENCFF956RCJ, ENCFF985NHB chr1 173401239 173401240 - Predicted LTR|ERVK|IAPEy-int ENSMUSG00000073491.12, Ifi213 ENCFF105KSL, ENCFF192NVI, ENCFF262WAE, ENCFF269UZL, ENCFF273TLO, ENCFF367BBB, ENCFF443PSO, ENCFF453XOG, ENCFF472YPG, ENCFF525POD, ENCFF544BEF, ENCFF723QIC, ENCFF931HCN, ENCFF994BOT, ENCFF016CHX, ENCFF043DTH, ENCFF064VAD, ENCFF167GWU, ENCFF179HJV, ENCFF219PCN, ENCFF310HAL, ENCFF328TJH, ENCFF335UNU, ENCFF346UBA, ENCFF438ROC, ENCFF443URE, ENCFF565FFU, ENCFF613YNK, ENCFF696QTS, ENCFF810SCH, ENCFF866IHG, ENCFF904KCQ, ENCFF946LMX, ENCFF956RCJ, ENCFF985NHB chr1 173518234 173518235 + Predicted LTR|ERVK|ERVB2_1-I_MM ENSMUSG00000066677.13, Ifi208 ENCFF040EEJ, ENCFF497GLK, ENCFF538TFM, ENCFF538ZTW, ENCFF611OFH, ENCFF644EGG, ENCFF806XNV, ENCFF477YHR chr1 173570274 173570297 - Predicted LINE|L1|Lx3A ENSMUSG00000073490.12, Ifi207 ENCFF040EEJ, ENCFF075MGH, ENCFF082HKQ, ENCFF086ZMV, ENCFF092YWY, ENCFF107XGE, ENCFF126RJS, ENCFF147GLI, ENCFF279BVM, ENCFF307VAF, ENCFF379JPQ, ENCFF495SQR, ENCFF521UGJ, ENCFF540XSD, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF600AGS, ENCFF605IFN, ENCFF639RWJ, ENCFF672HUA, ENCFF723KAG, ENCFF734FHF, ENCFF773VFS, ENCFF780TUN, ENCFF784LWT, ENCFF858CRT, ENCFF868XLZ, ENCFF910ESY, ENCFF913CFN, ENCFF931DDH, ENCFF951UXE, ENCFF960LQP, ENCFF970JWC, ENCFF972IVS, ENCFF009AVK, ENCFF067OYG, ENCFF098AYQ, ENCFF116DGU, ENCFF124SSE, ENCFF163GEC, ENCFF177LXI, ENCFF221ZQB, ENCFF223SMG, ENCFF237HDL, ENCFF254TFB, ENCFF286GUQ, ENCFF343MZH, ENCFF358UHV, ENCFF399TOF, ENCFF417INY, ENCFF420REU, ENCFF456GLS, ENCFF468RDR, ENCFF524FJG, ENCFF529LEZ, ENCFF531JWM, ENCFF572SQL, ENCFF587HBC, ENCFF618PVF, ENCFF632HDE, ENCFF651HEM, ENCFF661UPO, ENCFF695XIY, ENCFF750IZJ, ENCFF814TTQ, ENCFF825JNK, ENCFF847IGW, ENCFF952FJN, ENCFF955WXI, ENCFF964DLW, ENCFF994JUO, ENCFF996AOW chr1 173614897 173614918 - Predicted LINE|L1|L1MdTf_III ENSMUSG00000090222.3, Ifi203-ps ENCFF560YXX, ENCFF925ONP, ENCFF931DDH, ENCFF370VOV, ENCFF394AUR, ENCFF478MHH, ENCFF529LEZ, ENCFF565FFU, ENCFF601JTS, ENCFF618PVF, ENCFF640RWH, ENCFF741PLM, ENCFF821HAZ, ENCFF896XAZ chr1 173761492 173761493 - Predicted LTR|ERVK|RLTR10E ENSMUSG00000039997.17, Ifi203 ENCFF181RDS, ENCFF167EHX, ENCFF237JCE, ENCFF588JAU, ENCFF597BNT, ENCFF756QJD, ENCFF904KCQ chr1 178276219 178276222 + Predicted LINE|L2|L2a ENSMUSG00000026495.9, Efcab2 ENCFF002FAA, ENCFF067UCQ, ENCFF134HVE, ENCFF170XMM, ENCFF236TUH, ENCFF304DLW, ENCFF390NKP, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF657UWH, ENCFF686KMX, ENCFF756QCA, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF939IUH, ENCFF160TQC, ENCFF199IWW, ENCFF319SDE, ENCFF344OJQ, ENCFF423TSB, ENCFF446LMP, ENCFF517DCU, ENCFF641WPY, ENCFF723MAR chr1 179420933 179420962 + Annotated SINE|B2|B3 ENSMUSG00000038949.9, Cnst ENSMUST00000143270.2 ENCFF720MPJ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR5643201, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 179432338 179432339 + Predicted SINE|ID|ID2 ENSMUSG00000038949.9, Cnst ENCFF432ZLQ, ENCFF537DSI, SRR10697195, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR15198217, SRR15198225, SRR15198227, SRR2927112, SRR2927113 chr1 179803464 179803465 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000026490.19, Cdc42bpa ENSMUST00000143350.8 chr1 179948098 179948099 + Predicted LINE|L1|L1MdV_II ENSMUSG00000026490.19, Cdc42bpa ENCFF001RTD, ENCFF001RTN, ENCFF060JCS, ENCFF101BDM, ENCFF269SRJ, ENCFF271OHB, ENCFF377LAC, ENCFF465BBM, ENCFF510TTU, ENCFF595WXV, ENCFF636NES, ENCFF721BNO, ENCFF924LPZ, ENCFF962FIU, ENCFF119IHT, ENCFF446LMP, ENCFF510AYI, ENCFF670VVN, ENCFF847LGC, ENCFF911OIZ, SRR15198218, SRR15198219 chr1 179975715 179975716 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000103636.2, Gm38331 ENSMUST00000195719.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ chr1 180455518 180455540 + Predicted SINE|Alu|PB1D7 ENSMUSG00000058729.14, Lin9 DRR091689, DRR091693, SRR10697200, SRR10697203, SRR11428468, SRR13142118, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9178977, SRR9178980, SRR9178987 chr1 182128509 182128536 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000100147.4, 1700047M11Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr1 183745466 183745500 + Annotated SINE|MIR|MIRb ENSMUSG00000039384.9, Dusp10 ENSMUST00000139839.2 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697203, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178976, SRR9178977, SRR9178978, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 184114263 184114264 + Predicted LINE|L1|Lx8 ENSMUSG00000102682.6, Gm37223 DRR091694, DRR091698, SRR10697203, SRR11428468, SRR11428469, SRR13142119, SRR13142120, SRR15198218, SRR15198225, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR5643201, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178986, SRR9178987, SRR9178988, SRR9178992 chr1 184818252 184818311 + Annotated LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000103478.2, 4930433J02Rik ENSMUST00000194719.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904684, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 185087553 185087554 + Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000026617.17, Bpnt1 SRR2089603, SRR2089604, SRR2089606, SRR2089610, SRR2089614, SRR2089615, SRR2089617, SRR2089629, SRR2089630, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr1 186857308 186857359 + Annotated LINE|L1|L1MCa ENSMUSG00000089730.3, 1700007P06Rik ENSMUST00000160380.3, NR_040554.1 ENCFF468AKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 192523960 192524014 + Annotated SINE|B4|B4A ENSMUSG00000100872.3, 1700065J18Rik ENSMUST00000190576.3, ENSMUST00000188648.2, NR_040468.1 DRR091689, DRR091691, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR5643190, SRR5643192, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 192885346 192885347 + Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000089683.3, 4930570N18Rik ENSMUST00000159273.3 DRR091688, DRR091689, DRR091690, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428468, SRR11428470, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR3178205, SRR3178206, SRR6338004, SRR6904685, SRR9178977, SRR9178979, SRR9178980, SRR9178982, SRR9178984, SRR9178987, SRR9178989, SRR9178990 chr1 192890007 192890059 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000026639.19, Lamb3 ENSMUST00000194407.2, ENSMUST00000194677.6, ENSMUST00000192322.6, ENSMUST00000162977.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, ENCFF002DND, ENCFF051JGE, ENCFF102BWR, ENCFF437AJW, ENCFF450WAV, ENCFF993QUE, ENCFF013HYW, ENCFF345BBC, ENCFF532UKS, ENCFF609ZVL, ENCFF712DGP, ENCFF935LAF, ENCFF945ICZ, ENCFF014SLC, ENCFF062GNP, ENCFF186VNL, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF349AIG, ENCFF442OKF, ENCFF494ZWE, ENCFF499GDC, ENCFF574YMK, ENCFF582WGH, ENCFF653QJY, ENCFF671TUD, ENCFF720MPJ, ENCFF854IBU, ENCFF904RJF chr1 19385626 19385627 - Predicted LINE|L1|L1MdMus_II ENSMUSG00000101117.2, Gm28341 SRR2089604, SRR2089615, SRR2089616, SRR2089619, SRR2089620, SRR2089621, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089647, SRR2089648 chr1 19419750 19419751 - Predicted LINE|L1|L1MC4a ENSMUSG00000101117.2, Gm28341 SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089648, SRR2089649, SRR2089650 chr1 194814056 194814057 - Predicted LTR|ERV1|RMER5 ENSMUSG00000016481.16, Cr1l ENCFF002EZU, ENCFF221JNS, ENCFF351JWR, ENCFF564OKH, ENCFF005GQR, ENCFF060JCS, ENCFF173IVH, ENCFF245ZOR, ENCFF247QZW, ENCFF270ERO, ENCFF308FEA, ENCFF408NBX, ENCFF448TTG, ENCFF519YGA, ENCFF573UIH, ENCFF596QWT, ENCFF642YTY, ENCFF721ASG, ENCFF737OUQ, ENCFF754TOT, ENCFF775SSI, ENCFF854MWX, ENCFF860XMD, ENCFF923VUD, ENCFF952BCB, ENCFF962OCF, ENCFF027GBM, ENCFF077CYB, ENCFF267VBU, ENCFF275TCB, ENCFF334XFS, ENCFF371ZDG, ENCFF119IHT, ENCFF254YNR, ENCFF269AST, ENCFF277QHC, ENCFF510AYI, ENCFF723MAR, ENCFF728WJB, ENCFF911OIZ, SRR15198221, SRR15198225, SRR15198228, SRR2040601, SRR9080662, SRR9080665, SRR9080666 chr1 20426651 20426688 + Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000089914.3, 4930486I03Rik ENSMUST00000161509.3, NR_045734.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR6338004, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 20865262 20865263 - Predicted SINE|B4|RSINE1 ENSMUSG00000041859.11, Mcm3 SRR2089636, SRR2089638, SRR2089640, SRR2089651 chr1 21395962 21395963 - Annotated LTR|ERVK|LTR10_RN ENSMUSG00000121505.1, Gm4956 ENSMUST00000246206.1, ENSMUST00000246446.1, ENSMUST00000246937.1, ENSMUST00000241047.1 chr1 21453780 21453781 + Annotated SINE|Alu|B1_Mur2 ENSMUSG00000085079.4, Khdc1b ENSMUST00000147615.2, NM_001113187.1 chr1 21728721 21728722 - Predicted LINE|L1|Lx9 ENSMUSG00000028033.17, Kcnq5 SRR2089621, SRR2089629, SRR2089630, SRR2089632, SRR2089634, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr1 25066089 25066090 - Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000099392.2, Gm29414 DRR091699, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR15198217, SRR15198219, SRR15198222, SRR15198223, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904685, SRR9080665, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178988, SRR9178989 chr1 25066179 25066180 - Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000099392.2, Gm29414 DRR091688, DRR091690, DRR091693, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR13142120, SRR15198217, SRR15198219, SRR15198222, SRR15198223, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904685, SRR9080665, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178988, SRR9178989, SRR9178992 chr1 25066279 25066353 - Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000099392.2, Gm29414 ENSMUST00000185379.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198218, SRR15198220, SRR15198221, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR6904683, SRR6904684, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178991, SRR9178992 chr1 26727525 26727540 - Predicted LINE|L1|Lx2B ENSMUSG00000073722.4, 4931408C20Rik SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080663 chr1 31007102 31007103 - Predicted LINE|L1|L1MdF_IV ENSMUSG00000086727.10, ENSMUSG00000117310.3, 4931428L18Rik, Ptp4a1 SRR2089604, SRR2089622, SRR2089629, SRR2089643 chr1 31319110 31319111 + Predicted LINE|L1|L1MdF_I ENSMUSG00000094215.4, Gm6489 SRR2089603, SRR2089604, SRR2089611, SRR2089615, SRR2089616, SRR2089620, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089637, SRR2089641, SRR2089643, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr1 33772356 33772358 + Predicted LINE|L1|Lx8 ENSMUSG00000004768.15, Rab23 DRR091694, DRR091695, DRR091699, SRR10697195, SRR11428467, SRR11428468, SRR2040601, SRR2927113, SRR9080666, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178985 chr1 36050153 36050163 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000104201.2, 4930535G08Rik ENSMUST00000192017.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080665, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 36371748 36371790 + Annotated LINE|L1|L1MDa ENSMUSG00000102762.2, 4930403P22Rik ENSMUST00000192234.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697198, SRR10697199, SRR10697200, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9178976, SRR9178977, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 37575557 37575558 - Predicted LINE|I-Jockey|X12_LINE ENSMUSG00000026110.16, Mgat4a ENCFF001RTF, ENCFF007RPT, ENCFF133PEB, ENCFF159OVE, ENCFF437AJW, ENCFF480BVV, ENCFF489IGD, ENCFF552NWL, ENCFF654BXL, ENCFF683RFI, ENCFF696TCH, ENCFF771LLL, ENCFF865WQE, ENCFF880FYC, ENCFF907HVO, ENCFF931DDH, ENCFF013CHH, ENCFF033ZUH, ENCFF060JCS, ENCFF065LOT, ENCFF067UCQ, ENCFF134HVE, ENCFF156YWS, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF234LUQ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF326UXM, ENCFF339MSB, ENCFF345BBC, ENCFF369YLA, ENCFF379TZT, ENCFF390NKP, ENCFF394BDJ, ENCFF408NBX, ENCFF444YCN, ENCFF446FOZ, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF572TOH, ENCFF588DUN, ENCFF592GVA, ENCFF595WXV, ENCFF604SXL, ENCFF647TTU, ENCFF657UWH, ENCFF694NRG, ENCFF721ASG, ENCFF725ATS, ENCFF744OEI, ENCFF747XPP, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF818BAS, ENCFF840XYZ, ENCFF855FCX, ENCFF860XMD, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF962FIU, ENCFF962OCF, ENCFF967NOO, ENCFF970VKB, ENCFF002SZY, ENCFF009AON, ENCFF015JJB, ENCFF095NMU, ENCFF149BQJ, ENCFF178ZXW, ENCFF203EWG, ENCFF235HER, ENCFF255XDN, ENCFF268YSJ, ENCFF268ZHE, ENCFF279EVY, ENCFF369VAI, ENCFF390AUP, ENCFF427YDU, ENCFF497KLL, ENCFF548JDU, ENCFF578MOR, ENCFF609WDV, ENCFF635XED, ENCFF637CVI, ENCFF727EPG, ENCFF872SFD, ENCFF886UAF, ENCFF921PGH, ENCFF949QCF, ENCFF953POL, ENCFF958BIE, ENCFF983GRF, ENCFF008XVO, ENCFF160TQC, ENCFF199IWW, ENCFF248ELC, ENCFF260KJY, ENCFF269AST, ENCFF302TQH, ENCFF319SDE, ENCFF342GAL, ENCFF349AIG, ENCFF361MLD, ENCFF399XUL, ENCFF442OKF, ENCFF446LMP, ENCFF494ZWE, ENCFF517DCU, ENCFF555BQD, ENCFF569XGG, ENCFF626KIV, ENCFF716YKR, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF854IBU, ENCFF904RJF, ENCFF932SOZ, SRR9178976 chr1 37699803 37699842 + Annotated LINE|L1|L1M4c ENSMUSG00000104365.2, 4930470B04Rik ENSMUST00000192005.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 37984260 37984261 - Predicted LTR|ERVL|RMER10A ENSMUSG00000026085.12, Lyg1 SRR2089616, SRR2089618, SRR2089643 chr1 39667933 39667953 - Predicted LTR|ERVL-MaLR|ORR1G ENSMUSG00000050967.6, Creg2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 40289800 40289801 + Predicted LTR|ERVK|RLTR11A ENSMUSG00000026072.13, Il1r1 SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004 chr1 40554522 40554609 + Annotated DNA|TcMar-Tigger|Tigger19b ENSMUSG00000026068.12, Il18rap ENSMUST00000027237.12, ENSMUST00000163057.8, ENSMUST00000159724.2, NM_010553.4 ENCFF001NCP, ENCFF001RTJ, ENCFF002DND, ENCFF051JGE, ENCFF102BWR, ENCFF143PHU, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF874ELO, ENCFF993QUE, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF455DHP, ENCFF609ZVL, ENCFF970VKB, ENCFF705CES chr1 40738837 40738846 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000026062.13, Slc9a2 SRR2089609, SRR2089614, SRR2089616, SRR2089617, SRR2089619, SRR2089637, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr1 42693491 42693492 + Predicted LINE|L1|Lx8 ENSMUSG00000104199.2, 4930420N18Rik SRR2089604, SRR2089605, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr1 42767495 42767509 + Predicted SINE|B2|B3 ENSMUSG00000093436.7, Gm20646 SRR2089614, SRR2089616, SRR2089617, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089642, SRR2089643, SRR2089644, SRR2089646, SRR2089649 chr1 44248038 44248039 - Predicted LINE|L1|L1MdV_II ENSMUSG00000046828.4, Mettl21e SRR2089606, SRR2089611, SRR2089616, SRR2089642, SRR2089643, SRR2089644 chr1 44431938 44431982 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000100769.2, Gm28893 ENSMUST00000190951.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 50949092 50949122 + Annotated LINE|L1|Lx2B2 ENSMUSG00000026109.15, Tmeff2 ENSMUST00000114565.8 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR10697200, SRR10697203, SRR11428469, SRR11428470, SRR15198217, SRR15198221, SRR15198224, SRR15198225, SRR2040601, SRR2927111, SRR2927113, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178982, SRR9178983, SRR9178989, SRR9178990, SRR9178992 chr1 52130224 52130225 - Annotated LINE|L1|L1MdV_I ENSMUSG00000078291.2, Gm3940 ENSMUST00000105087.2 chr1 52241814 52241856 - Predicted DNA|hAT-Charlie|Charlie2b ENSMUSG00000026103.15, Gls ENCFF151QHP, ENCFF212JFB, ENCFF304MIZ, ENCFF321BMO, ENCFF330IYN, ENCFF366BBB, ENCFF453XOG, ENCFF497YRP, ENCFF691URX, ENCFF884DLS, ENCFF970XZM, ENCFF979WZO, ENCFF994BOT, ENCFF080BTV, ENCFF087XKQ, ENCFF098TCZ, ENCFF201IQS, ENCFF261EQP, ENCFF277JGD, ENCFF311MZV, ENCFF346UBA, ENCFF350KYC, ENCFF353SEU, ENCFF370VOV, ENCFF386XTQ, ENCFF440IAL, ENCFF460VXC, ENCFF507VMW, ENCFF572JDP, ENCFF613YNK, ENCFF696QTS, ENCFF712EKU, ENCFF740TFX, ENCFF756QJD, ENCFF757JMT, ENCFF772QLP, ENCFF829HAB, ENCFF829WND, ENCFF856UMI, ENCFF899EJT, ENCFF904KCQ, ENCFF907KCF, ENCFF934QGX, ENCFF955WXI, ENCFF956RCJ, ENCFF994JUO chr1 52607691 52607699 + Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000043015.16, Nemp2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6338004, SRR6904683, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 52839529 52839530 - Annotated LTR|ERVL|MT2B ENSMUSG00000026102.10, Inpp1 ENSMUST00000159725.2 ENCFF017LOD, ENCFF023MKT, ENCFF345BBC, ENCFF308WGP, ENCFF904RJF chr1 53529910 53529911 - Predicted LINE|L1|L1MdF_I ENSMUSG00000096141.3, Dnah7a SRR2089607, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr1 54495921 54495945 - Annotated LTR|ERVK|MLTR11B ENSMUSG00000109809.2, Gm34066 ENSMUST00000210156.2, NM_001378419.1 DRR091688, DRR091689, DRR091692, DRR091694, DRR091695, DRR091698, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986 chr1 54837362 54837363 - Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000052331.15, Ankrd44 ENCFF140VGY, ENCFF422ATU, ENCFF625JLB, ENCFF167GWU, ENCFF581ZWM, ENCFF803ZUN, ENCFF869DVY, ENCFF984QED, ENCFF994PPZ chr1 57615856 57615857 + Annotated LTR|ERVL-MaLR|ORR1A3 ENSMUSG00000121279.1, ENSMUSG00000121279 ENSMUST00000247727.1 ENCFF993QUE, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF455DHP, ENCFF609ZVL, ENCFF970VKB, ENCFF178HDG chr1 58536226 58536227 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000026037.15, Orc2 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr1 58841383 58841384 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000026029.15, Casp8 ENCFF002DND, ENCFF048IBL, ENCFF074HTO, ENCFF090USB, ENCFF102BWR, ENCFF186RYS, ENCFF775RSS, ENCFF933UPG, ENCFF996STG, ENCFF935LAF, ENCFF073RJJ, ENCFF205CDI, ENCFF348RRM, ENCFF357AGP, ENCFF378TYU, ENCFF387BVS, ENCFF530DUT, ENCFF637PIP, ENCFF647RUH, ENCFF673GRZ, ENCFF766UJI, ENCFF898CAY, ENCFF997QQG chr1 58841465 58841466 + Predicted LINE|L1|L1MA4A ENSMUSG00000026029.15, Casp8 ENCFF048IBL, ENCFF074HTO, ENCFF090USB, ENCFF186RYS, ENCFF595GFM, ENCFF683RFI, ENCFF775RSS, ENCFF808XFI, ENCFF813GGJ, ENCFF933UPG, ENCFF937GBW, ENCFF996STG, ENCFF073RJJ, ENCFF313IFI, ENCFF343MIX, ENCFF378TYU, ENCFF387BVS, ENCFF512XKX, ENCFF530DUT, ENCFF611OFH, ENCFF637PIP, ENCFF647RUH, ENCFF673GRZ, ENCFF689UNV, ENCFF766UJI, ENCFF997QQG chr1 59053238 59053296 - Predicted DNA|hAT-Charlie|Charlie30b ENSMUSG00000072295.8, C2cd6 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697199, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 59160603 59160604 - Predicted LINE|CR1|L3 ENSMUSG00000038079.15, Tmem237 DRR091688, DRR091689, DRR091690, DRR091691, SRR10697197, SRR10697198, SRR11428470, SRR9178980 chr1 59798485 59798486 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000119961.1, ENSMUSG00000119961 ENCFF001NDA, ENCFF001NDZ, ENCFF521IDK, ENCFF696TCH chr1 61890620 61890689 - Annotated LTR|ERVL-MaLR|MLT1A ENSMUSG00000085842.8, Pard3bos1 ENSMUST00000138535.8 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198222, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904683, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr1 62871373 62871374 - Annotated LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000100426.3, Gm4208 ENSMUST00000246970.1 chr1 64967231 64967300 - Annotated LTR|ERVL|LTR79 ENSMUSG00000051344.14, Plekhm3 ENSMUST00000140857.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002FAI, ENCFF005NBP, ENCFF022FSI, ENCFF043JGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF076CCZ, ENCFF084PUC, ENCFF091WMS, ENCFF094CCP, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF125HRQ, ENCFF136POG, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF163LPQ, ENCFF189WYV, ENCFF207DLW, ENCFF210BCB, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF297CWJ, ENCFF308LTO, ENCFF322VJD, ENCFF326TQL, ENCFF332ZPO, ENCFF344ILW, ENCFF344LNZ, ENCFF351JWR, ENCFF390QUP, ENCFF401HCS, ENCFF421SNO, ENCFF445BBH, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF478FDA, ENCFF533JUU, ENCFF548SLN, ENCFF560YXX, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF667FDW, ENCFF705JRV, ENCFF761RKP, ENCFF773VFS, ENCFF775BPV, ENCFF782JNB, ENCFF784LWT, ENCFF793STU, ENCFF802GAN, ENCFF808XFI, ENCFF888HEF, ENCFF910ESY, ENCFF917RNE, ENCFF924VRI, ENCFF931PFF, ENCFF937GBW, ENCFF993QUE, ENCFF023MKT, ENCFF970VKB, ENCFF002SZY, ENCFF004AEL, ENCFF027GBM, ENCFF061WTN, ENCFF067OYG, ENCFF083IRL, ENCFF088SVK, ENCFF116QKZ, ENCFF133KGZ, ENCFF143RTP, ENCFF156XMZ, ENCFF158HQO, ENCFF178ZXW, ENCFF205CDI, ENCFF210BVU, ENCFF235HER, ENCFF242MZE, ENCFF258WLS, ENCFF260UQJ, ENCFF268ZHE, ENCFF275HRX, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF305GPD, ENCFF313IFI, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF369VAI, ENCFF380LXU, ENCFF387BVS, ENCFF390AUP, ENCFF406LFV, ENCFF426ETE, ENCFF429TQT, ENCFF437ZSM, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF486GBM, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF517EJZ, ENCFF536ZVF, ENCFF548JDU, ENCFF552KEA, ENCFF573WSG, ENCFF576EOD, ENCFF596INO, ENCFF596PMK, ENCFF611OFH, ENCFF611QZE, ENCFF613SEJ, ENCFF614WCH, ENCFF615ULR, ENCFF633QXI, ENCFF636SOT, ENCFF637CVI, ENCFF656DRS, ENCFF667RGF, ENCFF683WFA, ENCFF689RQK, ENCFF693POR, ENCFF707HQI, ENCFF712BKP, ENCFF737VKP, ENCFF743NNG, ENCFF747VYT, ENCFF780UQU, ENCFF801SNQ, ENCFF817HZQ, ENCFF834TQY, ENCFF860SGX, ENCFF864DTX, ENCFF883APB, ENCFF938CNS, ENCFF952LUC, ENCFF955YCX, ENCFF956ZKG, ENCFF960QTC, ENCFF983GRF, ENCFF999ZYF, ENCFF186VNL, ENCFF260KJY, ENCFF302TQH, ENCFF349AIG, ENCFF477YHR, ENCFF574YMK chr1 64967990 64968070 - Predicted Retroposon|L1-dep|RMER1B ENSMUSG00000051344.14, Plekhm3 ENCFF059IQN, ENCFF064PBF, ENCFF083CUR, ENCFF092YWY, ENCFF114PSQ, ENCFF117BGT, ENCFF133PEB, ENCFF162UVS, ENCFF196PBF, ENCFF198NQV, ENCFF207OVG, ENCFF229AIZ, ENCFF262URV, ENCFF265LKR, ENCFF277XPM, ENCFF279BVM, ENCFF287KDR, ENCFF304MIZ, ENCFF312CZB, ENCFF321BMO, ENCFF330LWU, ENCFF331WKS, ENCFF345OIF, ENCFF348VIH, ENCFF363XWU, ENCFF385MVU, ENCFF393UZV, ENCFF403ORF, ENCFF420RFN, ENCFF453XOG, ENCFF519IZA, ENCFF525POD, ENCFF564OKH, ENCFF565YHF, ENCFF589MBR, ENCFF600AGS, ENCFF647ICR, ENCFF654BXL, ENCFF670CXH, ENCFF671ERF, ENCFF672HUA, ENCFF745HSV, ENCFF783MLO, ENCFF787LWL, ENCFF793CWJ, ENCFF812CUD, ENCFF823PZU, ENCFF844KCR, ENCFF844QDN, ENCFF849GVQ, ENCFF868XLZ, ENCFF880FYC, ENCFF884DLS, ENCFF896IIZ, ENCFF906FNQ, ENCFF935XRF, ENCFF942WIP, ENCFF946AGD, ENCFF956WVJ, ENCFF982BLT, ENCFF989HJD, ENCFF002ZAX, ENCFF012HVN, ENCFF012KPC, ENCFF016CHX, ENCFF022ACG, ENCFF037LEJ, ENCFF039DES, ENCFF052RNG, ENCFF065UBR, ENCFF066MTU, ENCFF089SWU, ENCFF095NMU, ENCFF098AYQ, ENCFF098TCZ, ENCFF111MWQ, ENCFF120SMK, ENCFF124SSE, ENCFF136DUH, ENCFF137OYQ, ENCFF141YUD, ENCFF151XBP, ENCFF162FTA, ENCFF163GEC, ENCFF166UTY, ENCFF187BHR, ENCFF197JAP, ENCFF198XFF, ENCFF208BJY, ENCFF209LBA, ENCFF239RQP, ENCFF240OIM, ENCFF254TFB, ENCFF256UWN, ENCFF275TCB, ENCFF286GUQ, ENCFF286RSE, ENCFF306FQJ, ENCFF310HAL, ENCFF310WDZ, ENCFF335UNU, ENCFF338LFG, ENCFF346UBA, ENCFF350KYC, ENCFF353SEU, ENCFF376PQU, ENCFF403CRC, ENCFF406NLL, ENCFF411YXB, ENCFF417INY, ENCFF422CQE, ENCFF423GTP, ENCFF429ZEH, ENCFF433QNW, ENCFF439BEV, ENCFF450CUC, ENCFF454DOT, ENCFF462HZM, ENCFF468RDR, ENCFF470RDW, ENCFF507WIK, ENCFF517BAY, ENCFF518TUP, ENCFF524PAV, ENCFF531JWM, ENCFF533ZIO, ENCFF538ZTW, ENCFF543GNI, ENCFF549IDH, ENCFF549KAB, ENCFF584ZUK, ENCFF588JAU, ENCFF593TQB, ENCFF603QSQ, ENCFF613YNK, ENCFF635XED, ENCFF640RWH, ENCFF657NUT, ENCFF658NHH, ENCFF661UPO, ENCFF672WYO, ENCFF673SLO, ENCFF680OWA, ENCFF685GDB, ENCFF695XIY, ENCFF698WQO, ENCFF698XCB, ENCFF711OYQ, ENCFF724VJN, ENCFF746ZCS, ENCFF751QWY, ENCFF754VQW, ENCFF755REI, ENCFF757JMT, ENCFF759WDO, ENCFF764AQK, ENCFF765AQX, ENCFF772QLP, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF803ZUN, ENCFF816CPX, ENCFF829WND, ENCFF840DKD, ENCFF847HFJ, ENCFF848LWJ, ENCFF856UMI, ENCFF858OFI, ENCFF863LMG, ENCFF869MFM, ENCFF875BUD, ENCFF881DTW, ENCFF896XAZ, ENCFF908MGO, ENCFF916BSM, ENCFF917KUH, ENCFF931NMQ, ENCFF949QCF, ENCFF951GZB, ENCFF956RCJ, ENCFF974KKD, ENCFF996WVL, ENCFF997QQG chr1 65071882 65071940 - Annotated LTR|ERVK|MRLTR33 ENSMUSG00000025955.14, Akr1cl ENSMUST00000162800.8, ENSMUST00000069142.12, ENSMUST00000161313.2, ENSMUST00000160283.2, NM_027582.4, NM_001310617.1 ENCFF001NDD, ENCFF001RTD, ENCFF027RRZ, ENCFF033ZUH, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF143BIC, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF251WZA, ENCFF269WEZ, ENCFF284AEN, ENCFF315OOH, ENCFF330FNX, ENCFF339MSB, ENCFF364LFJ, ENCFF442FJC, ENCFF446FOZ, ENCFF510LAE, ENCFF521NCL, ENCFF567AFB, ENCFF573UIH, ENCFF581KUX, ENCFF608LAL, ENCFF609KQB, ENCFF651SDJ, ENCFF657OJR, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF826RUZ, ENCFF834VIK, ENCFF838YLT, ENCFF845NXM, ENCFF854KNE, ENCFF862FYE, ENCFF912MUD, ENCFF923VUD, ENCFF933MOZ, ENCFF943XKB, ENCFF952BCB, ENCFF969WLB, ENCFF975NCY, ENCFF197NCG, ENCFF242SVY, ENCFF306ADU, ENCFF342GAL, ENCFF366CUG, ENCFF454JTI, ENCFF481CFU, ENCFF555BQD, ENCFF667KKO, ENCFF715CAJ, ENCFF827NYZ, ENCFF906OAF, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178980, SRR9178986, SRR9178989 chr1 6515682 6515688 - Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000103845.2, Gm19026 ENCFF056GXQ, ENCFF064PBF, ENCFF262URV, ENCFF289WHW, ENCFF415KCJ, ENCFF432ZLQ, ENCFF552NWL, ENCFF670YKO, ENCFF734FHF, ENCFF828WIK, ENCFF868XLZ, ENCFF931DDH, ENCFF003GJV, ENCFF049WBL, ENCFF068CQU, ENCFF124SSE, ENCFF134PXJ, ENCFF149BQJ, ENCFF175LCC, ENCFF203EWG, ENCFF222MKT, ENCFF249LSC, ENCFF307OHZ, ENCFF315HBU, ENCFF378TYU, ENCFF420REU, ENCFF454DOT, ENCFF464KYQ, ENCFF483KXD, ENCFF497KLL, ENCFF578MOR, ENCFF596INO, ENCFF647RUH, ENCFF672WYO, ENCFF698WQO, ENCFF711OYQ, ENCFF735BVR, ENCFF812LAI, ENCFF910CTW, ENCFF926IDV, ENCFF932XKS, ENCFF949QCF chr1 65321222 65321234 + Predicted LTR|ERVL-MaLR|MLT1A1 ENSMUSG00000025946.14, Pth2r DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697201, SRR10697202, SRR13142118, SRR13142119, SRR13142122, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9080666, SRR9178976, SRR9178979 chr1 70228423 70228424 + Predicted LINE|L1|Lx5c ENSMUSG00000053153.15, Spag16 SRR2089605, SRR2089607, SRR2089611, SRR2089613, SRR2089615, SRR2089616, SRR2089633, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089646 chr1 70313792 70313793 - Predicted LINE|L1|Lx7 ENSMUSG00000103052.2, Gm38272 SRR2089618, SRR2089635, SRR2089636, SRR2089637, SRR2089639, SRR2089651 chr1 74272191 74272216 + Predicted LTR|ERVK|RLTR33 ENSMUSG00000006304.15, Arpc2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr1 74343755 74343821 - Predicted SINE|Alu|PB1D10 ENSMUSG00000006301.18, Tmbim1 ENCFF064PBF, ENCFF297BEX, ENCFF345OIF, ENCFF878SQO, ENCFF896MQK, ENCFF033ZUH, ENCFF060JCS, ENCFF199ZDO, ENCFF223BXU, ENCFF271OHB, ENCFF330FNX, ENCFF335ZSA, ENCFF446FOZ, ENCFF519YGA, ENCFF521NCL, ENCFF533DWD, ENCFF609KQB, ENCFF632LPV, ENCFF657OJR, ENCFF737OUQ, ENCFF744OEI, ENCFF838YLT, ENCFF840XYZ, ENCFF914YDJ, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF964WZW, ENCFF208BJY, ENCFF237JCE, ENCFF456GLS, ENCFF591WVP, ENCFF601JTS, ENCFF637PIP, ENCFF727EPG, ENCFF927LFD, ENCFF986DZE, ENCFF160TQC, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF454JTI, ENCFF517DCU, ENCFF555BQD, ENCFF667KKO, ENCFF715CAJ, ENCFF723MAR, ENCFF906OAF, SRR15198222, SRR15198224 chr1 74344780 74344781 - Annotated LTR|ERVL-MaLR|ORR1A3 ENSMUSG00000006301.18, Tmbim1 ENSMUST00000130763.8 ENCFF027IIP chr1 74430196 74430286 + Predicted SINE|B2|B3 ENSMUSG00000026176.14, Ctdsp1 ENCFF001NCP, ENCFF027IIP, ENCFF056GXQ, ENCFF064PBF, ENCFF102AMK, ENCFF138QRF, ENCFF138TOM, ENCFF206EGD, ENCFF210BCB, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF264DCN, ENCFF283XKV, ENCFF289WHW, ENCFF308LTO, ENCFF330LWU, ENCFF334RGJ, ENCFF347UAC, ENCFF352VWM, ENCFF415KCJ, ENCFF432ZLQ, ENCFF489VZI, ENCFF533CLY, ENCFF534DID, ENCFF554PUC, ENCFF641QXI, ENCFF686EWL, ENCFF704GEB, ENCFF710DAI, ENCFF773VFS, ENCFF782JNB, ENCFF787LWL, ENCFF793CWJ, ENCFF795DLS, ENCFF796NHQ, ENCFF813ZJI, ENCFF849GVQ, ENCFF884TJE, ENCFF896IIZ, ENCFF925ONP, ENCFF985BLV, ENCFF989HJD, ENCFF027RRZ, ENCFF052WUB, ENCFF115LWP, ENCFF236TUH, ENCFF330FNX, ENCFF355AMN, ENCFF369YLA, ENCFF377LAC, ENCFF444YCN, ENCFF581KUX, ENCFF590LNP, ENCFF595WXV, ENCFF609KQB, ENCFF609ZVL, ENCFF657OJR, ENCFF728TXU, ENCFF756QCA, ENCFF766LGO, ENCFF826RUZ, ENCFF912MUD, ENCFF923VUD, ENCFF935LAF, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF004AEL, ENCFF068CQU, ENCFF094RHV, ENCFF163BDT, ENCFF163DKN, ENCFF170KWW, ENCFF177LXI, ENCFF187BHR, ENCFF194DAO, ENCFF208BJY, ENCFF222MKT, ENCFF255ESE, ENCFF303BIV, ENCFF347EUO, ENCFF348RRM, ENCFF357AGP, ENCFF378TYU, ENCFF399YLV, ENCFF409ABB, ENCFF643SBQ, ENCFF689RQK, ENCFF698WQO, ENCFF743NNG, ENCFF812LAI, ENCFF898CAY, ENCFF951PCM, ENCFF959CWA, ENCFF960QTC, ENCFF986DZE, ENCFF998BIQ, ENCFF062GNP, ENCFF197NCG, ENCFF260KJY, ENCFF342GAL, ENCFF499GDC, ENCFF517DCU, ENCFF574YMK, ENCFF854IBU, SRR10697202, SRR10697203, SRR11428469, SRR11428470, SRR2927112, SRR2927113, SRR6338004 chr1 74430342 74430834 + Annotated SINE|B2|B3 ENSMUSG00000026176.14, Ctdsp1 ENSMUST00000027367.14, NM_153088.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NEC, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF075MGH, ENCFF083BIG, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF104LLO, ENCFF106RGV, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF273TLO, ENCFF274WSX, ENCFF283XKV, ENCFF284OMO, ENCFF289WHW, ENCFF295SYY, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF308LTO, ENCFF310HPH, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF439OFV, ENCFF445BBH, ENCFF449MIK, ENCFF453XOG, ENCFF462ABU, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF491XRO, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF575RUC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF605IFN, ENCFF623BKO, ENCFF625JLB, ENCFF643VPC, ENCFF654BXL, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF683RFI, ENCFF686EWL, ENCFF705JRV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF771LLL, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793IYH, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF841OXD, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF865WQE, ENCFF868XLZ, ENCFF874ELO, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881UBL, ENCFF883UYA, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF907HVO, ENCFF912RLS, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970JWC, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF023MKT, ENCFF027RRZ, ENCFF052WUB, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF170XMM, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF234LUQ, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF359GCY, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377UGQ, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF609ZVL, ENCFF636NES, ENCFF642YTY, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF818BAS, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF933KQV, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF027GCQ, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF061WTN, ENCFF065ZIE, ENCFF066MTU, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077YZF, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF095NMU, ENCFF103SQR, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF134VWD, ENCFF141YUD, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF208BJY, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF235HER, ENCFF243LBQ, ENCFF243TPB, ENCFF258WLS, ENCFF260UQJ, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286RSE, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF306FQJ, ENCFF306OWL, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF332RWQ, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF347EUO, ENCFF348RRM, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF369VAI, ENCFF371ZDG, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF406LFV, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF414IHO, ENCFF417OEG, ENCFF421DHQ, ENCFF422CQE, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF647KBV, ENCFF651HEM, ENCFF655CUI, ENCFF656DRS, ENCFF661TOM, ENCFF672WYO, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF696VQM, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF758BKM, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF772QLP, ENCFF775OZV, ENCFF780UQU, ENCFF781MKK, ENCFF786BUI, ENCFF790WIY, ENCFF794MMU, ENCFF801SNQ, ENCFF804EWD, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF819JGD, ENCFF821HAZ, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF843WRN, ENCFF855UFX, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF903KDM, ENCFF906CJJ, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF934VFW, ENCFF938XTE, ENCFF948YKH, ENCFF949QCF, ENCFF951PCM, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF986DZE, ENCFF994PPZ, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF667KKO, ENCFF671TUD, ENCFF715CAJ, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF932SOZ, ENCFF970VKL, DRR091690, DRR091697, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142121, SRR15198217, SRR15198219, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080665 chr1 74719891 74719892 + Predicted DNA|hAT-Charlie|Cheshire ENSMUSG00000033257.15, Ttll4 ENCFF313ERY, ENCFF367BBB, ENCFF453XOG, ENCFF472YPG, ENCFF868XLZ, ENCFF913CFN, ENCFF326UXM, ENCFF609ZVL, ENCFF111MWQ, ENCFF386HCR, ENCFF775OZV, ENCFF853PNO, ENCFF896XAZ, ENCFF917KUH, ENCFF955WXI chr1 75166799 75166800 - Predicted LINE|L2|AmnL2-1 ENSMUSG00000026200.14, ENSMUSG00000033124.17, Glb1l, Atg9a ENCFF002ERW, ENCFF064PBF, ENCFF179WPT, ENCFF198RBJ, ENCFF420RFN, ENCFF005GQR, ENCFF060JCS, ENCFF134HVE, ENCFF170XMM, ENCFF222GPK, ENCFF236TUH, ENCFF247QZW, ENCFF269SRJ, ENCFF270ERO, ENCFF296VFB, ENCFF304DLW, ENCFF385UBP, ENCFF444YCN, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF533DWD, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF632LPV, ENCFF642YTY, ENCFF657UWH, ENCFF694NRG, ENCFF744OEI, ENCFF785TEQ, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF886BRO, ENCFF924LPZ, ENCFF962FIU, ENCFF964WZW, ENCFF003GJV, ENCFF237HDL, ENCFF279EVY, ENCFF505PJK, ENCFF598PMW, ENCFF615ULR, ENCFF689UNV, ENCFF959CWA, ENCFF160TQC, ENCFF277QHC, ENCFF344OJQ, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF499GDC, ENCFF517DCU, ENCFF641WPY, ENCFF733LFV, SRR9080662, SRR9080663, SRR9080665, SRR9080666 chr1 7568192 7568193 + Annotated LTR|ERV1|LTRIS2 ENSMUSG00000103067.2, Gm30414 ENSMUST00000194886.2 chr1 76465770 76465771 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000100553.7, Gm17751 ENSMUST00000190362.7, ENSMUST00000189132.2, NR_038013.1, NR_038012.1 chr1 78487797 78487807 + Annotated SINE|B4|B4 ENSMUSG00000012187.14, Mogat1 ENSMUST00000149732.8, ENSMUST00000113524.8 chr1 79739763 79739764 - Annotated DNA|TcMar-Tc2|Kanga1b ENSMUSG00000073643.12, Wdfy1 ENSMUST00000125641.2 ENCFF524EDD, ENCFF533CLY, ENCFF222MKT, ENCFF672WYO chr1 80162436 80162437 + Annotated LTR|ERVL-MaLR|ORR1A3 ENSMUSG00000099552.2, 9830004L10Rik ENSMUST00000191325.2 SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601 chr1 80647256 80647261 - Predicted LINE|L1|L1MdF_IV ENSMUSG00000038608.16, Dock10 ENCFF347UAC, ENCFF422ATU, ENCFF443PSO, ENCFF450WAV, ENCFF470MXU, ENCFF570GTP, ENCFF595GFM, ENCFF643VPC, ENCFF654BXL, ENCFF783MLO, ENCFF792XYG, ENCFF907HVO, ENCFF956WVJ, ENCFF985BLV, ENCFF933KQV, ENCFF082OML, ENCFF106GHS, ENCFF149DFF, ENCFF155GUC, ENCFF167GWU, ENCFF237HDL, ENCFF255ESE, ENCFF308WGP, ENCFF377OQI, ENCFF397ZQU, ENCFF426ZCK, ENCFF429ZEH, ENCFF453MPR, ENCFF497KLL, ENCFF515GXB, ENCFF581ZWM, ENCFF597BNT, ENCFF755REI, ENCFF804EWD, ENCFF840EFC, ENCFF843WRN, ENCFF866IHG, ENCFF928YDQ, ENCFF997QQG, ENCFF998BIQ, ENCFF494ZWE, ENCFF582WGH chr1 80665533 80665596 - Predicted LINE|L1|L1MdA_I ENSMUSG00000038608.16, Dock10 ENCFF082HKQ, ENCFF295SYY, ENCFF321BMO, ENCFF489VZI, ENCFF495SQR, ENCFF521UGJ, ENCFF707QJV, ENCFF710DAI, ENCFF771YNG, ENCFF896MQK, ENCFF914BRK, ENCFF962LFN, ENCFF022ACG, ENCFF024CUG, ENCFF049WBL, ENCFF065UBR, ENCFF068CQU, ENCFF077YZF, ENCFF078CCF, ENCFF088PZI, ENCFF106RLX, ENCFF118YHP, ENCFF121IDD, ENCFF142PTA, ENCFF151XBP, ENCFF162FTA, ENCFF167EHX, ENCFF169JOQ, ENCFF174EGP, ENCFF175LCC, ENCFF179HJV, ENCFF184ALY, ENCFF185TRT, ENCFF192XJA, ENCFF194DAO, ENCFF201IQS, ENCFF209RRO, ENCFF221ZQB, ENCFF229CPV, ENCFF255XDN, ENCFF272VMY, ENCFF275TCB, ENCFF286RSE, ENCFF301VMF, ENCFF310BWG, ENCFF310WDZ, ENCFF328TJH, ENCFF331YYO, ENCFF338DAA, ENCFF346UBA, ENCFF363PDR, ENCFF371ZDG, ENCFF374VAZ, ENCFF378TYU, ENCFF382VCK, ENCFF386CRY, ENCFF403RPK, ENCFF404HLB, ENCFF420REU, ENCFF421DHQ, ENCFF422ZNC, ENCFF443URE, ENCFF450CUC, ENCFF479WHZ, ENCFF483SQS, ENCFF485GFE, ENCFF486BJT, ENCFF497NJW, ENCFF504PGI, ENCFF524PAV, ENCFF529YFS, ENCFF536ZFC, ENCFF538ZTW, ENCFF552LXG, ENCFF562MVN, ENCFF578YPJ, ENCFF584ZUK, ENCFF588JAU, ENCFF591WVP, ENCFF620FXM, ENCFF637GVH, ENCFF647RUH, ENCFF655KBW, ENCFF658NHH, ENCFF668SQN, ENCFF678CRA, ENCFF681EEO, ENCFF685FUZ, ENCFF694EPZ, ENCFF698XCB, ENCFF717GIT, ENCFF724VJN, ENCFF726YTS, ENCFF740TFX, ENCFF740WXS, ENCFF757JMT, ENCFF758IOS, ENCFF790WIY, ENCFF791AUB, ENCFF794GVC, ENCFF798TFC, ENCFF814PHK, ENCFF821HAZ, ENCFF829HAB, ENCFF849PKR, ENCFF859MTL, ENCFF875BUD, ENCFF917KUH, ENCFF936LNA, ENCFF939UBM, ENCFF948BDY, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF964HGL, ENCFF970PLY, ENCFF971DTR, ENCFF976SMI, ENCFF985NHB, ENCFF986DZE, ENCFF996AOW chr1 85238751 85238899 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000052477.16, C130026I21Rik ENCFF001NCP, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF040EEJ, ENCFF119KNP, ENCFF179WPT, ENCFF198RBJ, ENCFF214IUN, ENCFF262WAE, ENCFF265LKR, ENCFF312CZB, ENCFF319INV, ENCFF326TQL, ENCFF375EMG, ENCFF415KCJ, ENCFF420RFN, ENCFF472YPG, ENCFF482MUH, ENCFF524EDD, ENCFF525POD, ENCFF593RAV, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF725RXU, ENCFF761RKP, ENCFF764ZUI, ENCFF881TID, ENCFF931HCN, ENCFF982BLT, ENCFF991TPB, ENCFF993QUE, ENCFF017LOD, ENCFF359GCY, ENCFF609ZVL, ENCFF008YSM, ENCFF033DWC, ENCFF041PJP, ENCFF068CQU, ENCFF070YMI, ENCFF106GHS, ENCFF148BPZ, ENCFF157IFW, ENCFF162FTA, ENCFF184ALY, ENCFF187BHR, ENCFF254VIN, ENCFF255ESE, ENCFF260BJB, ENCFF272WGJ, ENCFF277JGD, ENCFF286GUQ, ENCFF299ENO, ENCFF310HAL, ENCFF316EEH, ENCFF320CXH, ENCFF332IRR, ENCFF341YZB, ENCFF343MIX, ENCFF369VAI, ENCFF460FON, ENCFF469JWF, ENCFF505PJK, ENCFF507WIK, ENCFF513BRJ, ENCFF527XBQ, ENCFF538TFM, ENCFF581ZWM, ENCFF596INO, ENCFF596PMK, ENCFF606XHA, ENCFF632HDE, ENCFF637CVI, ENCFF643SBQ, ENCFF644EGG, ENCFF663SPA, ENCFF673GRZ, ENCFF673SLO, ENCFF764AQK, ENCFF798TFC, ENCFF809QBQ, ENCFF814PHK, ENCFF814TTQ, ENCFF820JMO, ENCFF829WND, ENCFF834TQY, ENCFF855UFX, ENCFF863LMG, ENCFF872SFD, ENCFF877VSZ, ENCFF916BSM, ENCFF916JWW, ENCFF944RHJ, ENCFF948BDY, ENCFF953POL, ENCFF062GNP, ENCFF248ELC, ENCFF302TQH, ENCFF349AIG, ENCFF442OKF, ENCFF653QJY, ENCFF854IBU chr1 85424995 85425006 + Predicted SINE|B4|B4A ENSMUSG00000070031.12, ENSMUSG00000101751.2, Sp140, Gm2427 ENCFF001RTF, ENCFF064PBF, ENCFF106RGV, ENCFF460NGS, ENCFF494YXM, ENCFF560YXX, ENCFF639RWJ, ENCFF727WWV, ENCFF896IIZ, ENCFF712DGP, ENCFF080DNG, ENCFF087XKQ, ENCFF136TYP, ENCFF144EDQ, ENCFF228CMT, ENCFF242MZE, ENCFF277JGD, ENCFF549IDH, ENCFF572SQL, ENCFF573WSG, ENCFF680OWA, ENCFF840DKD, ENCFF858OFI, ENCFF936LNA, ENCFF948YKH, ENCFF062GNP, ENCFF186VNL, ENCFF442OKF, ENCFF499GDC, ENCFF854IBU chr1 85531580 85531581 - Predicted LTR|ERVL|MT2_Mm ENSMUSG00000070034.14, Sp110 ENCFF001NCP, ENCFF001NDA, ENCFF359GCY, ENCFF935LAF, ENCFF945ICZ, ENCFF062GNP, ENCFF186VNL, ENCFF248ELC, ENCFF302TQH, ENCFF349AIG, ENCFF499GDC, ENCFF854IBU chr1 85706363 85706364 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000052760.17, A630001G21Rik ENSMUST00000159122.8 chr1 85707759 85707795 + Predicted LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000036707.17, ENSMUSG00000100217.2, Cab39, 9930111H07Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178992 chr1 85856448 85856449 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000026224.12, 4933407L21Rik ENSMUST00000129392.2 ENCFF002EZY, ENCFF013CHH, ENCFF377UGQ, ENCFF468AKL, ENCFF636NES, ENCFF854MWX, ENCFF962OCF, ENCFF399XUL, SRR15198219 chr1 85856607 85856608 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000026224.12, 4933407L21Rik ENSMUST00000188949.2 chr1 86734603 86734604 + Predicted LINE|L1|L1Lx_I ENSMUSG00000053333.16, Dis3l2 SRR2089608, SRR2089610, SRR2089611, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089633, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089643, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr1 89383151 89383201 + Predicted Retroposon|L1-dep|RMER1B ENSMUSG00000055013.17, Agap1 ENCFF001NDA, ENCFF001NDD, ENCFF002ERU, ENCFF002EZU, ENCFF007RPT, ENCFF027IIP, ENCFF059IQN, ENCFF083CUR, ENCFF106GQS, ENCFF207DLW, ENCFF310HPH, ENCFF348VIH, ENCFF450WAV, ENCFF453XOG, ENCFF519IZA, ENCFF711WAC, ENCFF883UYA, ENCFF942WIP, ENCFF993QUE, ENCFF516BTG, ENCFF567AFB, ENCFF012HVN, ENCFF037LEJ, ENCFF056UGH, ENCFF090EUZ, ENCFF106GHS, ENCFF118YHP, ENCFF136TYP, ENCFF162FTA, ENCFF163BDT, ENCFF267KZS, ENCFF310HAL, ENCFF338LFG, ENCFF357QTB, ENCFF369VAI, ENCFF399TOF, ENCFF466RIS, ENCFF505WKA, ENCFF561CZI, ENCFF585CYT, ENCFF591WVP, ENCFF615ULR, ENCFF640RWH, ENCFF643SBQ, ENCFF705CES, ENCFF727EPG, ENCFF751QWY, ENCFF772QLP, ENCFF794MMU, ENCFF801SNQ, ENCFF904KCQ, ENCFF931NMQ, ENCFF970WCD, ENCFF974KKD, DRR091695, SRR5643192, SRR5643200, SRR6338004 chr1 92644923 92644924 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000100546.3, Gm29483 ENSMUST00000188188.2 chr1 93499469 93499470 + Predicted LTR|ERVK|RMER4B ENSMUSG00000034066.14, Farp2 SRR2089635, SRR2089637, SRR2089639, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr1 93530756 93530757 + Predicted SINE|B2|B3A ENSMUSG00000034066.14, Farp2 SRR2089636, SRR2089638, SRR2089647, SRR2089649, SRR2089650 chr1 93532923 93532924 + Predicted SINE|Alu|PB1D10 ENSMUSG00000034066.14, Farp2 SRR2089612, SRR2089636, SRR2089640, SRR2089647, SRR2089648 chr1 93565599 93565600 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000026277.15, Stk25 DRR091688, DRR091695, SRR15198228, SRR9178979 chr1 93592393 93592394 - Predicted LTR|ERVK|RMER4A ENSMUSG00000026279.15, Thap4 SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr1 93679222 93679223 + Annotated LTR|ERVK|RLTR12D ENSMUSG00000026280.18, Atg4b ENSMUST00000149436.8 chr1 95644232 95644243 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000100777.2, 4930598F16Rik ENSMUST00000187352.2, NR_040479.1 DRR091691, DRR091693, DRR091695, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178985 chr1 97683696 97683697 - Predicted LTR|ERVL-MaLR|MTE2a ENSMUSG00000040648.16, Ppip5k2 ENCFF002FAC, ENCFF048FGD, ENCFF221NAP, ENCFF287KDR, ENCFF836JVX, ENCFF197JAP, ENCFF411KCB, ENCFF636SOT chr1 98101373 98101374 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000100711.2, Gm29461 ENSMUST00000189232.2, NR_151613.1 chr1 9839228 9839229 + Predicted LTR|ERVK|RMER17B ENSMUSG00000097893.10, 1700034P13Rik DRR091690, DRR091695, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178984, SRR9178989, SRR9178991 chr2 103640955 103640956 - Predicted LTR|ERVK|RLTR16 ENSMUSG00000086687.2, 4930547E08Rik SRR11428468, SRR15198218, SRR15198219, SRR15198222 chr2 104389495 104389541 + Annotated LTR|ERVK|RLTR16B_MM ENSMUSG00000086454.9, Platr14 ENSMUST00000247421.1, ENSMUST00000247600.1, ENSMUST00000127237.3, ENSMUST00000246299.1, ENSMUST00000243587.1, ENSMUST00000127350.3, ENSMUST00000246999.1, ENSMUST00000241022.1, ENSMUST00000125854.8, NR_040322.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF002FAI, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643199, SRR5643201, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 104439217 104439218 + Predicted LINE|L1|HAL1ME ENSMUSG00000027176.9, Cstf3 ENCFF002EZY, ENCFF106GQS, ENCFF793IYH, ENCFF885AJK, ENCFF912RLS, ENCFF234LUQ, ENCFF565YJQ, SRR13142121, SRR13142122, SRR6904683, SRR6904684, SRR6904685, SRR9080664, SRR9080665 chr2 105306814 105306858 + Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000086764.2, 4930527A07Rik ENSMUST00000130677.2 DRR091688, DRR091689, DRR091690, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, SRR10697199, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR5643199, SRR9080662, SRR9080666, SRR9178982, SRR9178985, SRR9178988 chr2 10745704 10745705 - Predicted LTR|ERVK|RLTR11B ENSMUSG00000086748.2, Gm13261 ENCFF089PFT, ENCFF521IDK, SRR2927112, SRR9178978, SRR9178979, SRR9178983 chr2 11092723 11092724 - Annotated LINE|L1|L1_Rod ENSMUSG00000084560.3, Gm26478 ENSMUST00000122611.3 chr2 112218099 112218100 + Predicted SINE|ID|ID4 ENSMUSG00000027132.4, Katnbl1 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr2 113538876 113538908 - Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000084798.2, 4930533B01Rik ENSMUST00000123377.2, NR_040614.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR5643192, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9178977, SRR9178982, SRR9178983, SRR9178985 chr2 117078752 117078753 + Annotated LTR|ERVL|MT2C_Mm ENSMUSG00000065845.3, Gm25189 ENSMUST00000083911.3 chr2 117652409 117652410 + Annotated LTR|ERVL|MLT2B1 ENSMUSG00000086221.2, 4930412B13Rik ENSMUST00000149239.2, NR_040631.1 chr2 118288308 118288309 + Predicted DNA|hAT-Charlie|Charlie6 ENSMUSG00000005102.14, Eif2ak4 ENCFF002DNB, ENCFF002FAC, ENCFF775RSS, ENCFF084CWD, ENCFF151YNV, ENCFF195JLT, ENCFF271OHB, ENCFF390NKP, ENCFF394BDJ, ENCFF455DHP, ENCFF465BBM, ENCFF500QZK, ENCFF657FNE, ENCFF704WWK, ENCFF721BNO, ENCFF747XPP, ENCFF818BAS, ENCFF822PGJ, ENCFF068KDU, ENCFF383AJS, ENCFF518TUP, ENCFF727JTZ, ENCFF958LRX, ENCFF254YNR, ENCFF277QHC, ENCFF574YMK, ENCFF715CAJ, ENCFF733LFV, ENCFF888IIL, SRR10697202, SRR15198227 chr2 119289314 119289315 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000034154.16, Ino80 ENCFF086ZMV, ENCFF114PSQ, ENCFF151QHP, ENCFF207DLW, ENCFF307VAF, ENCFF366BBB, ENCFF639RWJ, ENCFF723KAG, ENCFF844QDN, ENCFF045YRV, ENCFF088PZI, ENCFF162FTA, ENCFF207RVA, ENCFF209LBA, ENCFF257EYD, ENCFF268YSJ, ENCFF346NGU, ENCFF549KAB, ENCFF572JDP, ENCFF595NMM, ENCFF618PVF, ENCFF663TDQ, ENCFF740TFX, ENCFF772QLP, ENCFF829HAB, ENCFF900LFN, ENCFF955WXI, SRR9080666 chr2 119309291 119309292 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000034154.16, Ino80 ENCFF138QRF, ENCFF641QXI, ENCFF359GCY, ENCFF374YTS, ENCFF448TTG, ENCFF721BNO, ENCFF747XPP, ENCFF912MUD, ENCFF967NOO, ENCFF598WAL, ENCFF119IHT, ENCFF399XUL, ENCFF911OIZ, SRR2927112, SRR2927113 chr2 119586245 119586246 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000027297.16, Ltk ENCFF002EZW, ENCFF222GPK, ENCFF269SRJ, ENCFF377UGQ, ENCFF385UBP, ENCFF468AKL, ENCFF500QZK, ENCFF632LPV, ENCFF818BAS, ENCFF854MWX, ENCFF860XMD, ENCFF886BRO, ENCFF967NOO, ENCFF075EMK, ENCFF911OIZ, ENCFF932SOZ, SRR2040601 chr2 120076078 120076079 - Annotated SINE|B2|B3A ENSMUSG00000087555.2, Gm13997 ENSMUST00000155641.2 ENCFF002EZU, ENCFF002EZW, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF448TTG, ENCFF860XMD, ENCFF269AST, ENCFF510AYI, ENCFF510IAG, ENCFF525QIM chr2 122256124 122256125 + Predicted LTR|ERVL|MERVL_2A-int ENSMUSG00000027219.14, ENSMUSG00000079071.3, Slc28a2, Slc28a2b ENCFF017LOD, ENCFF274ESJ, ENCFF933KQV, ENCFF014SLC, ENCFF062GNP, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF494ZWE, ENCFF499GDC, ENCFF574YMK, ENCFF582WGH, ENCFF641WPY, ENCFF653QJY, ENCFF671TUD, ENCFF854IBU, ENCFF904RJF chr2 122256826 122256959 + Annotated LTR|ERVL|MT2A ENSMUSG00000027219.14, Slc28a2 ENSMUST00000110525.8, NM_001379460.1, NM_001379459.1, NM_001356532.3, NM_172980.4 ENCFF001NCP, ENCFF001RTF, ENCFF001RTJ, ENCFF005NBP, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF056GXQ, ENCFF064PBF, ENCFF074HUJ, ENCFF075MGH, ENCFF084PUC, ENCFF086ZMV, ENCFF091WMS, ENCFF092YWY, ENCFF102AMK, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF147GLI, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF196PBF, ENCFF205GJI, ENCFF206EGD, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF234MZC, ENCFF251TMY, ENCFF262URV, ENCFF264DCN, ENCFF277XPM, ENCFF283XKV, ENCFF284OMO, ENCFF289WHW, ENCFF291LRG, ENCFF308LTO, ENCFF312CZB, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF344LNZ, ENCFF345OIF, ENCFF349LIW, ENCFF352VWM, ENCFF371VGE, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF450WAV, ENCFF460NGS, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF494YXM, ENCFF514JOV, ENCFF521UGJ, ENCFF524EDD, ENCFF533CLY, ENCFF533JUU, ENCFF534DID, ENCFF552NWL, ENCFF554PUC, ENCFF560YXX, ENCFF581WWO, ENCFF585YYC, ENCFF589REP, ENCFF590NVM, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF672HUA, ENCFF686EWL, ENCFF698LQF, ENCFF711WAC, ENCFF723QIC, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF745HSV, ENCFF761RKP, ENCFF773VFS, ENCFF783MLO, ENCFF784LWT, ENCFF793CWJ, ENCFF793STU, ENCFF794FBC, ENCFF802GAN, ENCFF808XFI, ENCFF813ZJI, ENCFF844QDN, ENCFF849GVQ, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF868XLZ, ENCFF876MJS, ENCFF881UBL, ENCFF884TJE, ENCFF896IIZ, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF931DDH, ENCFF931PFF, ENCFF934ULS, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF017LOD, ENCFF270ERO, ENCFF444YCN, ENCFF532UKS, ENCFF592GVA, ENCFF604SXL, ENCFF686KMX, ENCFF712DGP, ENCFF756QCA, ENCFF803VZZ, ENCFF804UQS, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF933KQV, ENCFF935LAF, ENCFF945ICZ, ENCFF964WZW, ENCFF002SZY, ENCFF003GJV, ENCFF006JHA, ENCFF009AVK, ENCFF012KPC, ENCFF013SNI, ENCFF014CMK, ENCFF019PWU, ENCFF022ACG, ENCFF024CUG, ENCFF028XDY, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF039DES, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF054EOL, ENCFF057MDU, ENCFF061WTN, ENCFF065UBR, ENCFF067OYG, ENCFF068CQU, ENCFF077CYB, ENCFF082OML, ENCFF085RPW, ENCFF087IUJ, ENCFF087XKQ, ENCFF090EUZ, ENCFF106RLX, ENCFF107YGR, ENCFF116DGU, ENCFF116QKZ, ENCFF118YHP, ENCFF124SSE, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF136TYP, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF149BQJ, ENCFF149DFF, ENCFF151XBP, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF158HQO, ENCFF163GEC, ENCFF175LCC, ENCFF177LXI, ENCFF178ZXW, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF199AAD, ENCFF203EWG, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF222MKT, ENCFF223SMG, ENCFF229TCX, ENCFF235HER, ENCFF237JCE, ENCFF239RQP, ENCFF242MZE, ENCFF247VEN, ENCFF249LSC, ENCFF254TFB, ENCFF257EYD, ENCFF258WLS, ENCFF260UQJ, ENCFF264PYB, ENCFF267VBU, ENCFF275TCB, ENCFF277JGD, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296ITI, ENCFF297PPT, ENCFF299ENO, ENCFF303BIV, ENCFF307OHZ, ENCFF308WGP, ENCFF310WDZ, ENCFF315HBU, ENCFF316EEH, ENCFF332IRR, ENCFF338LFG, ENCFF346HDC, ENCFF352KGC, ENCFF357AGP, ENCFF358UHV, ENCFF359DNK, ENCFF366IEQ, ENCFF370VOV, ENCFF377OQI, ENCFF378TYU, ENCFF386CRY, ENCFF390AUP, ENCFF394AUR, ENCFF399YLV, ENCFF403CRC, ENCFF404HLB, ENCFF417INY, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF424GQM, ENCFF429TQT, ENCFF429ZEH, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF439HXQ, ENCFF453MPR, ENCFF454DOT, ENCFF456GLS, ENCFF459TYQ, ENCFF470RDW, ENCFF478BEL, ENCFF478YRJ, ENCFF479WHZ, ENCFF483KXD, ENCFF486BJT, ENCFF490ULA, ENCFF497KLL, ENCFF498OHV, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF516QKR, ENCFF517BAY, ENCFF522KWW, ENCFF524FJG, ENCFF527XBQ, ENCFF529LEZ, ENCFF531JWM, ENCFF537DSI, ENCFF543GNI, ENCFF548JDU, ENCFF549IDH, ENCFF549KAB, ENCFF558UDY, ENCFF559QXN, ENCFF561CZI, ENCFF563FUC, ENCFF565CON, ENCFF576EOD, ENCFF584ZUK, ENCFF593TQB, ENCFF596INO, ENCFF609WDV, ENCFF611OFH, ENCFF611QZE, ENCFF613SEJ, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF635XED, ENCFF636SOT, ENCFF637GVH, ENCFF644GYU, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF657NUT, ENCFF658NHH, ENCFF669PMR, ENCFF672WYO, ENCFF678CRA, ENCFF680OWA, ENCFF680WIN, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF693POR, ENCFF695XIY, ENCFF696TTO, ENCFF696VQM, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF747VYT, ENCFF750IZJ, ENCFF753HNF, ENCFF755REI, ENCFF758IOS, ENCFF765AQX, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF789AOM, ENCFF790WIY, ENCFF791ZDR, ENCFF794MMU, ENCFF806MTS, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF817HZQ, ENCFF817NCH, ENCFF820JMO, ENCFF825JNK, ENCFF829HAB, ENCFF830CBI, ENCFF832FTK, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847IGW, ENCFF848LWJ, ENCFF849PKR, ENCFF851JLX, ENCFF858OFI, ENCFF860SGX, ENCFF885ZAO, ENCFF899EJT, ENCFF901KUE, ENCFF903KDM, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF917KUH, ENCFF926FRX, ENCFF926IDV, ENCFF928YDQ, ENCFF932XKS, ENCFF936DQW, ENCFF938CNS, ENCFF939QLN, ENCFF939UBM, ENCFF949QCF, ENCFF951PCM, ENCFF953FGT, ENCFF956ZKG, ENCFF958FDX, ENCFF962ZCT, ENCFF974XWJ, ENCFF996AOW, ENCFF996WVL, ENCFF998BIQ, ENCFF999ZYF, ENCFF014SLC, ENCFF186VNL, ENCFF197NCG, ENCFF260KJY, ENCFF319SDE, ENCFF361MLD, ENCFF442OKF, ENCFF494ZWE, ENCFF499GDC, ENCFF517DCU, ENCFF574YMK, ENCFF582WGH, ENCFF705HQV, ENCFF720MPJ, ENCFF904RJF chr2 122270336 122270337 + Predicted LTR|ERVL|ERVL-B4-int ENSMUSG00000027219.14, Slc28a2 ENCFF001NCP, ENCFF002ERW, ENCFF059IQN, ENCFF121BYS, ENCFF225MMR, ENCFF437AJW, ENCFF489VZI, ENCFF593RAV, ENCFF813ZJI, ENCFF885AJK, ENCFF922KQY, ENCFF935XRF, ENCFF254VIN, ENCFF443URE, ENCFF633QXI, ENCFF713JXV, ENCFF810SCH, ENCFF832FTK, ENCFF856UMI, ENCFF951GZB chr2 122271209 122271340 + Predicted LTR|ERVL|MT2A ENSMUSG00000027219.14, Slc28a2 ENSMUST00000110524.2 ENCFF001NDZ, ENCFF001RTN, ENCFF002DND, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF048FGD, ENCFF051JGE, ENCFF090USB, ENCFF091WMS, ENCFF102BWR, ENCFF104LLO, ENCFF115KZV, ENCFF119KNP, ENCFF139MHN, ENCFF142CUS, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF198RBJ, ENCFF214IUN, ENCFF221JNS, ENCFF261OTH, ENCFF262URV, ENCFF296ASE, ENCFF297CWJ, ENCFF305IXM, ENCFF308LTO, ENCFF310HPH, ENCFF326TQL, ENCFF345OIF, ENCFF347HAB, ENCFF371VGE, ENCFF381JXP, ENCFF390QUP, ENCFF393UZV, ENCFF404PYQ, ENCFF421SNO, ENCFF449MIK, ENCFF482MUH, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF533JUU, ENCFF534DID, ENCFF552DRF, ENCFF570GTP, ENCFF589REP, ENCFF590NVM, ENCFF595GFM, ENCFF600AGS, ENCFF622NXP, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF670CXH, ENCFF670YKO, ENCFF725RXU, ENCFF743QXJ, ENCFF761RKP, ENCFF771LLL, ENCFF773VFS, ENCFF775RSS, ENCFF782JNB, ENCFF787LWL, ENCFF795DLS, ENCFF808XFI, ENCFF813GGJ, ENCFF823PZU, ENCFF836JVX, ENCFF876MJS, ENCFF878SQO, ENCFF888HEF, ENCFF925ONP, ENCFF931PFF, ENCFF942WIP, ENCFF982BLT, ENCFF991TPB, ENCFF993QUE, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF261ZZF, ENCFF345BBC, ENCFF369YLA, ENCFF390NKP, ENCFF455DHP, ENCFF516BTG, ENCFF588DUN, ENCFF609ZVL, ENCFF643XFK, ENCFF768ZCF, ENCFF970VKB, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF024CUG, ENCFF027GBM, ENCFF030IFE, ENCFF037LEJ, ENCFF041PJP, ENCFF047LTH, ENCFF049SEE, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF065ZIE, ENCFF068CQU, ENCFF080BTV, ENCFF080REY, ENCFF083IRL, ENCFF087IUJ, ENCFF111MWQ, ENCFF117ZMM, ENCFF118PQI, ENCFF121IDD, ENCFF124SSE, ENCFF133KGZ, ENCFF136DUH, ENCFF137OYQ, ENCFF139JTM, ENCFF150HVU, ENCFF156XMZ, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF167GWU, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF199AAD, ENCFF201IQS, ENCFF205CDI, ENCFF207HZS, ENCFF235HER, ENCFF243LBQ, ENCFF243TPB, ENCFF255XDN, ENCFF286GUQ, ENCFF299ENO, ENCFF301VMF, ENCFF313IFI, ENCFF315OFF, ENCFF320CXH, ENCFF332IRR, ENCFF334XFS, ENCFF338DAA, ENCFF341YZB, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF359DNK, ENCFF369VAI, ENCFF380BYT, ENCFF387BVS, ENCFF390AUP, ENCFF397MUI, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF430ERW, ENCFF439BEV, ENCFF440IAL, ENCFF469JWF, ENCFF476JSK, ENCFF477MBL, ENCFF478YRJ, ENCFF490ULA, ENCFF497NJW, ENCFF504PGI, ENCFF505PJK, ENCFF507WIK, ENCFF512LAN, ENCFF513BRJ, ENCFF533ZIO, ENCFF538ZTW, ENCFF543PXT, ENCFF552KEA, ENCFF557JPW, ENCFF565FFU, ENCFF572SQL, ENCFF578YPJ, ENCFF587HBC, ENCFF596INO, ENCFF597BNT, ENCFF598LJF, ENCFF601JTS, ENCFF606XHA, ENCFF609WRW, ENCFF611OFH, ENCFF612KDP, ENCFF614WCH, ENCFF618PVF, ENCFF619SKV, ENCFF627XGF, ENCFF637CVI, ENCFF644EGG, ENCFF644GYU, ENCFF661UPO, ENCFF663TDQ, ENCFF680WIN, ENCFF681EEO, ENCFF687STH, ENCFF689RQK, ENCFF689UNV, ENCFF693POR, ENCFF694EPZ, ENCFF707HQI, ENCFF712BKP, ENCFF726YTS, ENCFF727EPG, ENCFF737VKP, ENCFF740TFX, ENCFF758JNE, ENCFF769FVU, ENCFF780UQU, ENCFF804EWD, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF816CPX, ENCFF834TQY, ENCFF840DKD, ENCFF855UFX, ENCFF859MTL, ENCFF860SGX, ENCFF867FTP, ENCFF869DVY, ENCFF877SON, ENCFF881YOK, ENCFF896XAZ, ENCFF906CJJ, ENCFF934VFW, ENCFF938XTE, ENCFF953WBM, ENCFF955WXI, ENCFF958LRX, ENCFF966VVA, ENCFF976SMI, ENCFF985NHB, ENCFF994PPZ, ENCFF997QQG, ENCFF999ZYF, ENCFF178HDG, ENCFF260KJY, ENCFF277QHC, ENCFF423TSB, ENCFF499GDC, ENCFF626KIV, ENCFF641WPY, ENCFF733LFV, ENCFF888IIL, SRR2040601 chr2 122546150 122546157 + Annotated LTR|ERVL-MaLR|MLT1F ENSMUSG00000087017.8, 4930417H01Rik ENSMUST00000153728.8, ENSMUST00000155018.2 DRR091688, DRR091689, DRR091696, DRR091698, DRR091699, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2927113, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 122549043 122549044 + Predicted SINE|Alu|PB1D7 ENSMUSG00000087017.8, 4930417H01Rik SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228 chr2 123114139 123114152 + Predicted LTR|ERVK|RLTR10B ENSMUSG00000084372.2, Gm13988 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697198, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR9080662, SRR9080663, SRR9080666, SRR9178978, SRR9178983, SRR9178986, SRR9178988, SRR9178989 chr2 123114248 123114249 + Predicted LTR|ERVK|RLTR10B ENSMUSG00000084372.2, Gm13988 DRR091690, DRR091696, SRR11428467, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198223, SRR15198228, SRR2040601, SRR2927111, SRR9080663, SRR9178986 chr2 125059431 125059432 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000086416.2, Gm14002 ENSMUST00000123574.2 ENCFF001NCP, ENCFF001NCR chr2 126334273 126334274 - Predicted LINE|L1|Lx8 ENSMUSG00000060131.12, Atp8b4 ENCFF321BMO, ENCFF376MQF, ENCFF393UZV, ENCFF533CLY, ENCFF812CUD, ENCFF956WVJ, ENCFF994BOT, ENCFF970VKB, ENCFF350PHR, ENCFF409ABB, ENCFF422CQE, ENCFF580KHN, ENCFF997QQG chr2 126518240 126518241 - Predicted SINE|Alu|B1_Mm ENSMUSG00000027361.16, Gabpb1 ENCFF207OVG, ENCFF880FYC, ENCFF170XMM, ENCFF199IRM, ENCFF521NCL, ENCFF756QCA, DRR091689, DRR091691, DRR091692, DRR091693, DRR091696, DRR091698, SRR11428469, SRR11428470, SRR9178978, SRR9178979, SRR9178981, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178991, SRR9178992 chr2 127132140 127132141 + Predicted SINE|B2|B3 ENSMUSG00000027367.17, Stard7 ENCFF622NXP, ENCFF876MJS, ENCFF255ESE, ENCFF706BUS, ENCFF759WDO chr2 127322253 127322254 - Predicted SINE|MIR|MIRc ENSMUSG00000079056.13, Kcnip3 SRR2089605, SRR2089606, SRR2089613, SRR2089615, SRR2089649 chr2 127533755 127533820 + Annotated SINE|Alu|B1F ENSMUSG00000087162.2, Gm14244 ENSMUST00000155688.2, NR_166172.1, NR_166171.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR5643191, SRR5643192, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178978, SRR9178979, SRR9178981, SRR9178984, SRR9178987, SRR9178988, SRR9178989, SRR9178991 chr2 127653801 127653816 - Predicted LINE|L1|L1MD3 ENSMUSG00000027379.15, Bub1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 129306177 129306178 - Predicted LTR|ERVK|RLTR20A4 ENSMUSG00000027399.2, Il1a ENCFF755IDE, ENCFF095NMU, ENCFF272WGJ, ENCFF310HAL, ENCFF640RWH, ENCFF696XZL chr2 129348674 129348675 - Predicted LTR|ERVK|MLTR18_MM ENSMUSG00000043727.6, ENSMUSG00000086637.2, F830045P16Rik, Gm14040 ENCFF084PUC, ENCFF338LFG, ENCFF871CMC chr2 130506865 130506866 + Predicted SINE|B2|B3 ENSMUSG00000074797.12, Itpa ENCFF002FAG, ENCFF212ZXS, ENCFF394BDJ, ENCFF510TTU, ENCFF647TTU, ENCFF525QIM, DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198224, SRR15198225 chr2 131170907 131170908 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000048911.16, Rnf24 ENSMUST00000110194.8 chr2 131701666 131701667 - Annotated LTR|ERV1|RLTR14_RN ENSMUSG00000037482.3, Erv3 ENSMUST00000040941.3, NM_001166206.1 ENCFF001NEC, ENCFF489IGD, ENCFF874ELO, ENCFF383AJS chr2 132127812 132127813 + Predicted LTR|ERVK|RLTR16B_MM ENSMUSG00000058793.15, Cds2 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr2 132440115 132440117 + Annotated SINE|ID|ID4 ENSMUSG00000074783.11, AU019990 ENSMUST00000143964.8, ENSMUST00000153028.8, NR_033469.1, NR_033468.1 chr2 135058012 135058013 + Predicted SINE|B2|B3 ENSMUSG00000051177.17, Plcb1 SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr2 135920600 135920601 - Predicted LTR|ERVK|RMER20A ENSMUSG00000039913.13, Pak5 SRR2089620, SRR2089621, SRR2089622, SRR2089629, SRR2089634, SRR2089636, SRR2089650 chr2 135961498 135961499 - Predicted LINE|L1|L1MC3 ENSMUSG00000039913.13, Pak5 SRR2089629, SRR2089631, SRR2089634, SRR2089650 chr2 135979366 135979370 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000039913.13, Pak5 SRR2089609, SRR2089622, SRR2089635, SRR2089647, SRR2089648, SRR2089649, SRR2089650 chr2 136366558 136366559 + Predicted LTR|ERVL|MT2A ENSMUSG00000074771.11, Ankef1 DRR091689, DRR091693, DRR091694, DRR091695, DRR091698, DRR091699, SRR13142118, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR9178982 chr2 136394824 136394855 + Annotated LTR|ERVK|RMER17B2 ENSMUSG00000074771.11, Ankef1 ENSMUST00000131970.2, ENSMUST00000138967.2 DRR091688, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428470, SRR13142120, SRR15198218, SRR15198219, SRR15198224, SRR2040601, SRR2927112, SRR2927113, SRR5643190, SRR6904684, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 143855462 143855463 - Predicted DNA|TcMar-Tigger|MER2 ENSMUSG00000027422.16, Rrbp1 DRR091689, DRR091692, SRR10697197, SRR10697200, SRR11428469, SRR15198219, SRR2040601 chr2 143855665 143855666 - Predicted DNA|TcMar-Tigger|MER2 ENSMUSG00000027422.16, Rrbp1 DRR091695, SRR15198217, SRR15198220, SRR15198223, SRR15198225, SRR15198228, SRR2927112, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178989, SRR9178992 chr2 143952076 143952077 - Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000074758.11, Gm5535 SRR2089607, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089648, SRR2089649, SRR2089650 chr2 144179364 144179365 + Annotated LTR|ERVL-MaLR|MLT1C2 NR_166523.1, NR_166524.1 chr2 145396854 145396902 - Annotated LTR|ERVL-MaLR|MLT1H ENSMUSG00000074753.6, Gm14092 ENSMUST00000136794.2, NM_001037929.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091698, DRR091699, SRR13142120, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6904683, SRR9178976, SRR9178977, SRR9178979, SRR9178984, SRR9178989 chr2 150039689 150039690 - Predicted LTR|ERVK|IAPEz-int ENSMUSG00000068134.14, ENSMUSG00000074837.4, Zfp120, Gm10770 DRR091689, DRR091698, SRR10697195, SRR10697197, SRR10697198, SRR11428467, SRR13142118, SRR13142119, SRR15198218, SRR15198219, SRR15198221, SRR15198225, SRR2040601, SRR9178976, SRR9178977, SRR9178978, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 151586105 151586127 - Annotated LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000032869.16, Psmf1 ENSMUST00000109869.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR5643190, SRR5643191, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178991 chr2 151593365 151593388 - Annotated LTR|ERVL|RMER15 NR_138568.1, NR_138569.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 152278410 152278411 + Annotated SINE|MIR|MIR NM_001379452.1, NR_166674.1 ENCFF002EZY, ENCFF236TUH chr2 152857527 152857569 - Predicted LINE|L2|L2a ENSMUSG00000027472.15, Pdrg1 DRR091694, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198224, SRR15198227, SRR15198228, SRR6338004, SRR6904683, SRR6904685, SRR9080662, SRR9080663, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178983, SRR9178986, SRR9178988, SRR9178990 chr2 153002770 153002771 + Predicted LTR|ERVL|MT2B ENSMUSG00000068040.11, Tm9sf4 ENCFF082HKQ, ENCFF083BIG, ENCFF107XGE, ENCFF206EGD, ENCFF221JNS, ENCFF273TLO, ENCFF289WHW, ENCFF295SYY, ENCFF319INV, ENCFF415KCJ, ENCFF432ZLQ, ENCFF585YYC, ENCFF623BKO, ENCFF723QIC, ENCFF813GGJ, ENCFF924VRI, ENCFF970JWC, ENCFF234LUQ, ENCFF024CUG, ENCFF166UTY, ENCFF197TJB, ENCFF221ZQB, ENCFF237HDL, ENCFF267VBU, ENCFF324ITL, ENCFF357QTB, ENCFF371ZDG, ENCFF409ABB, ENCFF417OEG, ENCFF483SQS, ENCFF485GFE, ENCFF598PMW, ENCFF668SQN, ENCFF758IOS, ENCFF782CNW, ENCFF847IGW, SRR11428467 chr2 153002852 153002888 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000068040.11, Tm9sf4 ENCFF074HUJ, ENCFF082HKQ, ENCFF107XGE, ENCFF133PEB, ENCFF206EGD, ENCFF221JNS, ENCFF273TLO, ENCFF289WHW, ENCFF295SYY, ENCFF319INV, ENCFF415KCJ, ENCFF432ZLQ, ENCFF450WAV, ENCFF570GTP, ENCFF585YYC, ENCFF621PKT, ENCFF623BKO, ENCFF683RFI, ENCFF723QIC, ENCFF727WWV, ENCFF734FHF, ENCFF813GGJ, ENCFF924VRI, ENCFF941QCZ, ENCFF019PVP, ENCFF022ACG, ENCFF024CUG, ENCFF049WBL, ENCFF155GUC, ENCFF166UTY, ENCFF197TJB, ENCFF237HDL, ENCFF237JCE, ENCFF260UQJ, ENCFF267VBU, ENCFF315HBU, ENCFF324ITL, ENCFF357QTB, ENCFF371ZDG, ENCFF378TYU, ENCFF404HLB, ENCFF414IHO, ENCFF417OEG, ENCFF421DHQ, ENCFF483SQS, ENCFF485GFE, ENCFF497NJW, ENCFF584ZUK, ENCFF597BNT, ENCFF598PMW, ENCFF641CYW, ENCFF657NUT, ENCFF668SQN, ENCFF685FUZ, ENCFF742DJH, ENCFF782CNW, ENCFF821HAZ, ENCFF847IGW, ENCFF848UMJ, ENCFF926IDV, SRR10697196, SRR10697199, SRR10697202, SRR11428467, SRR13142118 chr2 154492787 154492802 + Predicted LTR|ERVK|RMER17C ENSMUSG00000038467.16, Chmp4b DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697200, SRR10697201, SRR10697202, SRR11428467, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198224, SRR15198225, SRR15198228, SRR2040601, SRR3178204, SRR3178205, SRR3178206, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr2 154782776 154782777 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000027596.11, a ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr2 154859786 154859787 + Predicted LTR|ERVK|ERVB4_1B-LTR_MM ENSMUSG00000027596.11, a DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198227, SRR2040601, SRR9080662, SRR9080664 chr2 154860200 154860201 + Predicted LTR|ERVK|ERVB4_1B-LTR_MM ENSMUSG00000027596.11, ENSMUSG00000084897.2, a, Gm14226 ENCFF573UIH, ENCFF912MUD, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR15198226, SRR2927111, SRR2927113, SRR5643190, SRR5643201, SRR6338004 chr2 154975049 154975050 + Predicted DNA|hAT-Charlie|MER5A ENSMUSG00000027598.17, Itch DRR091691, DRR091693, DRR091695, DRR091696, DRR091698, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR15198224, SRR9178977, SRR9178980 chr2 155433051 155433052 + Annotated SINE|Alu|PB1D10 ENSMUSG00000085317.2, Gssos2 ENSMUST00000130859.2 chr2 157413193 157413224 - Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000067787.11, Blcap ENSMUST00000173378.8, ENSMUST00000174336.2 DRR091688, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697197, SRR10697203, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198228, SRR2040601, SRR2927113, SRR9178980, SRR9178981, SRR9178982, SRR9178985 chr2 157439235 157439246 - Annotated LTR|ERVK|RLTR17 ENSMUSG00000087547.3, Platr27 ENSMUST00000247393.1, ENSMUST00000131365.3, NR_166472.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF002DND, ENCFF089PFT, ENCFF437AJW, ENCFF521IDK, ENCFF696TCH chr2 157674235 157674236 + Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000027649.16, Ctnnbl1 DRR091689, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697197, SRR10697198, SRR10697202, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR2040601, SRR9080664, SRR9080665, SRR9080666, SRR9178985 chr2 160461890 160461987 - Annotated LTR|ERVL-MaLR|MLT1I ENSMUSG00000078956.5, Gm14221 ENSMUST00000109473.2, ENSMUST00000209603.2, NR_168354.1 ENCFF007RPT, ENCFF027IIP, ENCFF074HTO, ENCFF090USB, ENCFF305IXM, ENCFF310HPH, ENCFF345OIF, ENCFF351JWR, ENCFF445BBH, ENCFF470MXU, ENCFF495YGN, ENCFF595GFM, ENCFF623BKO, ENCFF683RFI, ENCFF841OXD, ENCFF878SQO, ENCFF896MQK, ENCFF933UPG, ENCFF996STG, ENCFF060JCS, ENCFF019PVP, ENCFF237JCE, ENCFF275TCB, ENCFF280LCC, ENCFF296UDD, ENCFF369VAI, ENCFF371ZDG, ENCFF380BYT, ENCFF390ZZH, ENCFF426ETE, ENCFF541HSQ, ENCFF591WVP, ENCFF640RWH, ENCFF780UQU, ENCFF863LMG, ENCFF869DVY, ENCFF877VSZ, ENCFF938XTE, ENCFF952EQQ, SRR15198222, SRR15198226 chr2 160821418 160821419 - Predicted LINE|CR1|L3 ENSMUSG00000057133.15, Chd6 ENCFF002FAA, ENCFF002FAC, ENCFF106GQS, ENCFF192NVI, ENCFF672HUA, ENCFF691URX, ENCFF037GFB, ENCFF239RQP, ENCFF275HRX, ENCFF352KGC, ENCFF411YXB, ENCFF440IAL, ENCFF516QKR, ENCFF750IZJ, ENCFF926FRX chr2 162931520 162931521 - Annotated LTR|ERVK|RLTR11B NM_026630.2 ENCFF001NDA, ENCFF001NDD, ENCFF089PFT, ENCFF437AJW, ENCFF521IDK, ENCFF696TCH, DRR091688, SRR15198218, SRR15198222, SRR15198223, SRR15198227 chr2 163504825 163504855 + Predicted SINE|B2|B3 ENSMUSG00000035268.15, Pkig ENCFF051PTY, ENCFF059IQN, ENCFF091WMS, ENCFF121BYS, ENCFF214IUN, ENCFF262URV, ENCFF326TQL, ENCFF381JXP, ENCFF421SNO, ENCFF449MIK, ENCFF593RAV, ENCFF670CXH, ENCFF725RXU, ENCFF851ESH, ENCFF880FYC, ENCFF931PFF, ENCFF033DWC, ENCFF156XMZ, ENCFF157IFW, ENCFF275HRX, ENCFF279EVY, ENCFF299ENO, ENCFF338LFG, ENCFF482VRF, ENCFF490ULA, ENCFF505WKA, ENCFF596INO, ENCFF598WAL, ENCFF619SKV, ENCFF707HQI, ENCFF727JTZ, ENCFF751QWY, ENCFF780UQU, ENCFF860SGX, ENCFF864DTX, ENCFF869DVY, ENCFF872SFD, ENCFF956ZKG, ENCFF983GRF, ENCFF994PPZ chr2 164302413 164302414 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000045503.17, ENSMUSG00000090996.2, Sys1, Gm20458 ENCFF641QXI, ENCFF985BLV, ENCFF359GCY, ENCFF408NBX, ENCFF468AKL, ENCFF510TTU, ENCFF587VDB, ENCFF632LPV, ENCFF712DGP, ENCFF725ATS, ENCFF831ISX, ENCFF923VUD, ENCFF378TYU, ENCFF497KLL, ENCFF578MOR, ENCFF591WVP, ENCFF655CUI, ENCFF698WQO, ENCFF260KJY, ENCFF269AST, ENCFF670VVN, ENCFF803OIY, ENCFF904RJF, DRR091691, SRR10697195, SRR10697196, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR15198228, SRR9178977, SRR9178979, SRR9178984, SRR9178992 chr2 164304502 164304503 + Predicted SINE|MIR|MIR1_Amn ENSMUSG00000045503.17, ENSMUSG00000090996.2, Sys1, Gm20458 DRR091689, DRR091691, DRR091696, DRR091698, DRR091699, SRR9178976, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 164365599 164365600 + Annotated LTR|ERVK|RLTR44B ENSMUSG00000121248.1, ENSMUSG00000121248 ENSMUST00000247593.1 ENCFF001NDZ, ENCFF001NEC chr2 164427366 164427367 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000074595.10, Wfdc6a ENSMUST00000109342.2, NM_001033240.4 SRR10697202, SRR6338004, SRR9080664 chr2 164455442 164455443 + Annotated SINE|B4|ID_B1 ENSMUSG00000070531.5, Wfdc6b ENSMUST00000094346.3 DRR091688, DRR091689, DRR091695, SRR15198217, SRR15198220, SRR15198222, SRR15198227, SRR2040601, SRR2927112 chr2 164588258 164588296 + Predicted SINE|MIR|MIRb ENSMUSG00000017299.14, Dnttip1 ENCFF048FGD, ENCFF327MSM, ENCFF502ANK, ENCFF793IYH, ENCFF047LTH, ENCFF106RLX, ENCFF166UTY, ENCFF334XFS, ENCFF389ZWR, ENCFF423GTP, ENCFF565YJQ, ENCFF804EWD, ENCFF894SHM, DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, SRR10697199, SRR11428468, SRR13142123, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198225, SRR15198227, SRR2927112, SRR6338004, SRR9080662, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr2 164665781 164665782 + Predicted SINE|Alu|PB1D11 ENSMUSG00000017760.17, Ctsa ENCFF348VIH, ENCFF519IZA, ENCFF028XDY, ENCFF030IFE, ENCFF080BTV, ENCFF477MBL, ENCFF565CON chr2 164673508 164673707 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000017760.17, Ctsa ENCFF023RRS, ENCFF040EEJ, ENCFF076CCZ, ENCFF083CUR, ENCFF092YWY, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF138TOM, ENCFF147GLI, ENCFF162UVS, ENCFF168WHQ, ENCFF205GJI, ENCFF212JFB, ENCFF221JIC, ENCFF221JNS, ENCFF251TMY, ENCFF264RIV, ENCFF265LKR, ENCFF269UZL, ENCFF277XPM, ENCFF279BVM, ENCFF289WHW, ENCFF304MIZ, ENCFF321BMO, ENCFF330IYN, ENCFF334RGJ, ENCFF347UAC, ENCFF352VWM, ENCFF366BBB, ENCFF367BBB, ENCFF376MQF, ENCFF400XLQ, ENCFF439OFV, ENCFF462ABU, ENCFF552DRF, ENCFF554PUC, ENCFF570GTP, ENCFF581WWO, ENCFF608NVM, ENCFF622NXP, ENCFF641QXI, ENCFF670YKO, ENCFF686EWL, ENCFF691URX, ENCFF707QJV, ENCFF710DAI, ENCFF723QIC, ENCFF764EJV, ENCFF764ZUI, ENCFF780TUN, ENCFF795DLS, ENCFF812CUD, ENCFF849GVQ, ENCFF863RVB, ENCFF868XLZ, ENCFF881UBL, ENCFF884TJE, ENCFF896MQK, ENCFF902GVX, ENCFF907HVO, ENCFF910ESY, ENCFF917RNE, ENCFF931HCN, ENCFF951UXE, ENCFF956WVJ, ENCFF970JWC, ENCFF979WZO, ENCFF985BLV, ENCFF408NBX, ENCFF008YSM, ENCFF012KPC, ENCFF014CMK, ENCFF016CHX, ENCFF024CUG, ENCFF035BBA, ENCFF039DES, ENCFF045YRV, ENCFF052RNG, ENCFF064VAD, ENCFF065UBR, ENCFF066UDR, ENCFF098AYQ, ENCFF107YGR, ENCFF108JLQ, ENCFF117ZMM, ENCFF127DCC, ENCFF127KHN, ENCFF133PKQ, ENCFF134VWD, ENCFF136DUH, ENCFF136TYP, ENCFF143RTP, ENCFF151XBP, ENCFF163GEC, ENCFF198XFF, ENCFF207HZS, ENCFF208BJY, ENCFF221ZQB, ENCFF222MKT, ENCFF242MZE, ENCFF261EQP, ENCFF268YSJ, ENCFF272WGJ, ENCFF285NFL, ENCFF303BIV, ENCFF306FQJ, ENCFF307OHZ, ENCFF310WDZ, ENCFF324ITL, ENCFF331YYO, ENCFF332RWQ, ENCFF338DAA, ENCFF346NGU, ENCFF347EUO, ENCFF350PHR, ENCFF363PDR, ENCFF366IEQ, ENCFF376PQU, ENCFF377OQI, ENCFF386HCR, ENCFF399TOF, ENCFF403RPK, ENCFF404HLB, ENCFF406NLL, ENCFF414IHO, ENCFF421DHQ, ENCFF422CQE, ENCFF423GTP, ENCFF426ZCK, ENCFF437QAE, ENCFF439BEV, ENCFF454DOT, ENCFF456GLS, ENCFF462HZM, ENCFF468RDR, ENCFF486GBM, ENCFF505YPK, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF515GXB, ENCFF519AKK, ENCFF524FJG, ENCFF529LEZ, ENCFF538ZTW, ENCFF549IDH, ENCFF561CZI, ENCFF565FFU, ENCFF573WSG, ENCFF578YPJ, ENCFF584ZUK, ENCFF601JTS, ENCFF611QZE, ENCFF613SEJ, ENCFF613YNK, ENCFF620FXM, ENCFF646GBS, ENCFF647KBV, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF667RGF, ENCFF673SLO, ENCFF696QTS, ENCFF696VQM, ENCFF711OYQ, ENCFF746ZCS, ENCFF750IZJ, ENCFF772QLP, ENCFF775OZV, ENCFF781XUM, ENCFF786BUI, ENCFF794MMU, ENCFF796TQV, ENCFF803ZUN, ENCFF814PHK, ENCFF816CPX, ENCFF817HZQ, ENCFF818ZJQ, ENCFF820JMO, ENCFF821HAZ, ENCFF825JNK, ENCFF840DKD, ENCFF847IGW, ENCFF854LJN, ENCFF899EJT, ENCFF907KCF, ENCFF910CTW, ENCFF926IDV, ENCFF927LFD, ENCFF930JCE, ENCFF936LNA, ENCFF939QLN, ENCFF946LMX, ENCFF951GZB, ENCFF952FJN, ENCFF953FGT, ENCFF955WXI, ENCFF956RCJ, ENCFF994JUO, ENCFF996AOW, ENCFF997QQG chr2 164674286 164674379 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000017760.17, Ctsa ENCFF048IBL, ENCFF074HUJ, ENCFF084PUC, ENCFF126RJS, ENCFF136POG, ENCFF151QHP, ENCFF160HKC, ENCFF163LPQ, ENCFF207DLW, ENCFF229AIZ, ENCFF234MZC, ENCFF264DCN, ENCFF283XKV, ENCFF291LRG, ENCFF295SYY, ENCFF308LTO, ENCFF330LWU, ENCFF332ZPO, ENCFF349LIW, ENCFF393UZV, ENCFF460NGS, ENCFF494YXM, ENCFF495SQR, ENCFF525POD, ENCFF544BEF, ENCFF600AGS, ENCFF647ICR, ENCFF672HUA, ENCFF745HSV, ENCFF793CWJ, ENCFF794FBC, ENCFF844QDN, ENCFF880FYC, ENCFF914BRK, ENCFF915FID, ENCFF925ONP, ENCFF935XRF, ENCFF448TTG, ENCFF521NCL, ENCFF657FNE, ENCFF039PJR, ENCFF043DTH, ENCFF055PZZ, ENCFF057MDU, ENCFF067OYG, ENCFF087OKI, ENCFF149DFF, ENCFF174EGP, ENCFF177LXI, ENCFF184ALY, ENCFF197JAP, ENCFF233RGQ, ENCFF237HDL, ENCFF248XZC, ENCFF254TFB, ENCFF260BJB, ENCFF292KWK, ENCFF301VMF, ENCFF305GPD, ENCFF328TJH, ENCFF350KYC, ENCFF353SEU, ENCFF357AGP, ENCFF378TYU, ENCFF403CRC, ENCFF420REU, ENCFF422ZNC, ENCFF438ROC, ENCFF439HXQ, ENCFF464KYQ, ENCFF478MHH, ENCFF516QKR, ENCFF531JWM, ENCFF537DSI, ENCFF549KAB, ENCFF557JPW, ENCFF559QXN, ENCFF562MVN, ENCFF565DII, ENCFF597BNT, ENCFF612KDP, ENCFF641CYW, ENCFF644GYU, ENCFF663TDQ, ENCFF668SQN, ENCFF669PMR, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687STH, ENCFF699SBZ, ENCFF724VJN, ENCFF740TFX, ENCFF753HNF, ENCFF789AOM, ENCFF794GVC, ENCFF840EFC, ENCFF848LWJ, ENCFF866IHG, ENCFF875BUD, ENCFF904KCQ, ENCFF908MGO, ENCFF932XKS, ENCFF938CNS, ENCFF950FFF, ENCFF964DLW, ENCFF984QED, ENCFF996WVL, ENCFF178HDG chr2 164720215 164720216 + Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000039849.7, Pcif1 ENCFF002EZY, ENCFF043JGD, ENCFF091WMS, ENCFF178ZVU, ENCFF775BPV, ENCFF858CRT, ENCFF067UCQ, ENCFF222GPK, ENCFF339MSB, ENCFF429BQZ, ENCFF609KQB, ENCFF933MOZ, ENCFF023TPS, ENCFF024CUG, ENCFF053NFR, ENCFF055PZZ, ENCFF085RPW, ENCFF087IUJ, ENCFF116QKZ, ENCFF197TJB, ENCFF258WLS, ENCFF268ZHE, ENCFF341YZB, ENCFF346HDC, ENCFF387BVS, ENCFF390AUP, ENCFF406LFV, ENCFF482VRF, ENCFF619SKV, ENCFF637PIP, ENCFF673GRZ, ENCFF695XIY, ENCFF712BKP, ENCFF713JXV, ENCFF749XRU, ENCFF753HNF, ENCFF766UJI, ENCFF838BEV, ENCFF867FTP, ENCFF733LFV, DRR091698, SRR10697199, SRR11428469, SRR13142123, SRR15198223, SRR9178976, SRR9178977, SRR9178980, SRR9178981, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr2 164720272 164720322 + Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000039849.7, Pcif1 ENCFF002EZY, ENCFF043JGD, ENCFF086ZMV, ENCFF091WMS, ENCFF163LPQ, ENCFF178ZVU, ENCFF533JUU, ENCFF808XFI, ENCFF931PFF, ENCFF937GBW, ENCFF989HJD, ENCFF234LUQ, ENCFF339MSB, ENCFF385UBP, ENCFF886BRO, ENCFF933MOZ, ENCFF023TPS, ENCFF037IZV, ENCFF053NFR, ENCFF055PZZ, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF116QKZ, ENCFF258WLS, ENCFF275HRX, ENCFF341YZB, ENCFF344VGL, ENCFF346HDC, ENCFF387BVS, ENCFF390AUP, ENCFF426ETE, ENCFF482VRF, ENCFF512XKX, ENCFF530DUT, ENCFF619SKV, ENCFF637CVI, ENCFF637PIP, ENCFF696XZL, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF747VYT, ENCFF749XRU, ENCFF766UJI, ENCFF834TQY, ENCFF864DTX, ENCFF867FTP, ENCFF904RJF, SRR11428469, SRR9178976, SRR9178977, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr2 166370929 166370930 - Annotated LTR|ERVL-MaLR|MTEa NR_168917.1 chr2 167504029 167504066 + Annotated LINE|L2|L2b ENSMUSG00000085914.2, Gm14320 ENSMUST00000137275.2 DRR091689, DRR091693, DRR091694, DRR091695, DRR091696, DRR091699, SRR11428468, SRR13142120, SRR13142122, SRR13142123, SRR15198219, SRR15198221, SRR15198224, SRR15198226, SRR15198228, SRR2927113, SRR9080663, SRR9080664, SRR9178976, SRR9178979, SRR9178982 chr2 167506485 167506486 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000085914.2, Gm14320 DRR091688, DRR091689, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697197, SRR13142119, SRR13142120, SRR15198220, SRR15198226, SRR2040601, SRR2927111, SRR9080664, SRR9080665, SRR9178982, SRR9178985 chr2 169303843 169303853 + Annotated DNA|hAT-Tip100|Arthur1B NR_166520.1 DRR091689, DRR091690, DRR091692, DRR091698, DRR091699, SRR10697196, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 170454471 170454473 - Predicted LTR|ERVK|RLTR10B ENSMUSG00000043583.2, 4930470P17Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080664, SRR9080666, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr2 170515752 170515783 - Annotated LTR|ERVK|RLTR34B_MM ENSMUSG00000120109.1, Gm40003 ENSMUST00000242846.1, ENSMUST00000241453.1, ENSMUST00000243893.1, ENSMUST00000241417.1 ENCFF001NDA, ENCFF001NDD, ENCFF089PFT, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904683, SRR6904685, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 171789701 171789726 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000086823.8, 1700028P15Rik DRR091689, DRR091691, DRR091692, DRR091693, DRR091697, DRR091698, SRR10697200, SRR10697202, SRR11428468, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR9178977 chr2 171965339 171965340 + Predicted LTR|ERVK|RMER19B ENSMUSG00000083793.2, Gm14274 SRR2089614, SRR2089615, SRR2089616, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089646, SRR2089647, SRR2089648, SRR2089651 chr2 173133048 173133049 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000121269.1, ENSMUSG00000121269 ENSMUST00000247672.1 SRR2927113 chr2 174025710 174025711 - Annotated SINE|Alu|PB1D7 ENSMUSG00000074555.6, Gm10714 ENSMUST00000131346.2, NR_040530.1 chr2 174223162 174223163 - Predicted LINE|L1|Lx8b ENSMUSG00000090625.2, Gm20721 SRR2089608, SRR2089610, SRR2089611, SRR2089613, SRR2089614, SRR2089615, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634 chr2 175181396 175181398 - Predicted LTR|ERV1|LTR72_RN ENSMUSG00000078899.10, Gm4631 ENCFF251WZA, SRR2089606, SRR2089609, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089623, SRR2089631, SRR2089634, SRR2089635, SRR2089636, SRR2089640, SRR2089643, SRR2089646, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr2 175993314 175993315 + Predicted LTR|ERVK|RLTR45 ENSMUSG00000078894.10, ENSMUSG00000094108.2, 2210418O10Rik, Gm17258 ENCFF002EZU, ENCFF002FAI, ENCFF269SRJ, ENCFF721BNO, ENCFF886BRO chr2 177137015 177137016 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000083619.4, Gm14414 DRR091694, DRR091696, DRR091698, SRR11428468, SRR11428469, SRR11428470, SRR15198218, SRR15198221, SRR15198227, SRR2927112, SRR2927113 chr2 177521268 177521269 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000082901.2, Rps8-ps5 SRR2089609, SRR2089610, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 180930347 180930348 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000038705.14, Gmeb2 ENCFF067UCQ, ENCFF468AKL, ENCFF595WXV, ENCFF935LAF, ENCFF962OCF, ENCFF655CUI, ENCFF917KUH, ENCFF062GNP, ENCFF075EMK, ENCFF349AIG chr2 20260466 20260467 - Predicted LTR|ERVK|IAPEz-int ENSMUSG00000091457.2, Gm17171 SRR2089618, SRR2089620, SRR2089621, SRR2089631 chr2 20290790 20290791 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000091457.2, Gm17171 SRR2089607, SRR2089610, SRR2089612, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 20308584 20308585 - Predicted LINE|L1|L1Lx_I ENSMUSG00000091457.2, Gm17171 SRR2089604, SRR2089607, SRR2089608, SRR2089609, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089634, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089651 chr2 20311663 20311664 - Predicted LINE|L1|L1Lx_I ENSMUSG00000091457.2, Gm17171 SRR2089636, SRR2089637, SRR2089649, SRR2089650 chr2 20312423 20312424 - Predicted LINE|L1|L1Lx_I ENSMUSG00000091457.2, Gm17171 SRR2089618, SRR2089639, SRR2089640, SRR2089649 chr2 20350647 20350648 - Predicted LINE|L1|Lx9 ENSMUSG00000091457.2, Gm17171 SRR2089639, SRR2089640, SRR2089648, SRR2089651 chr2 20930715 20930716 - Predicted LINE|L1|L1Lx_II ENSMUSG00000036591.17, Arhgap21 ENCFF001NDZ, ENCFF001NEC, ENCFF002DMZ, ENCFF002DNB, ENCFF002ERW, ENCFF489IGD, ENCFF874ELO chr2 22645976 22645997 + Annotated Retroposon|L1-dep|RMER1A ENSMUSG00000085353.3, 1700092C17Rik ENSMUST00000135792.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 22754674 22754675 + Predicted LINE|L1|L1MdA_VI ENSMUSG00000026786.15, Apbb1ip ENCFF883UYA, ENCFF057MDU, ENCFF082OML, ENCFF422CQE, ENCFF611QZE, ENCFF781MKK, ENCFF946LMX chr2 23697311 23697312 + Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00002075040.1, Gm56256 SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228 chr2 25105588 25105589 + Predicted LINE|CR1|L3 ENSMUSG00000026969.4, Fam166a SRR11428467, SRR11428470, SRR15198218, SRR15198221, SRR15198224, SRR3178203, SRR3178204, SRR6904685, SRR9080666 chr2 25580829 25580830 - Predicted LTR|ERVK|MMERVK9E_I ENSMUSG00000015087.15, Rabl6 SRR2089617, SRR2089618, SRR2089622, SRR2089629, SRR2089634 chr2 27433255 27433256 + Predicted SINE|B4|B4A ENSMUSG00000085929.3, Gm13421 SRR2089603, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089641, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 27433411 27433412 + Predicted SINE|B4|B4A ENSMUSG00000085929.3, Gm13421 SRR2089605, SRR2089612, SRR2089619 chr2 27434472 27434473 + Predicted LTR|ERVK|RMER19B ENSMUSG00000085929.3, Gm13421 SRR2089605, SRR2089606, SRR2089609, SRR2089610, SRR2089616, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089636, SRR2089639, SRR2089648, SRR2089650, SRR2089651 chr2 27434723 27434724 + Predicted LTR|ERVK|RMER19B ENSMUSG00000085929.3, Gm13421 SRR2089603, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089643, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 27435134 27435135 + Predicted LTR|ERVK|RMER19B ENSMUSG00000085929.3, Gm13421 SRR2089604, SRR2089606, SRR2089607, SRR2089608, SRR2089610, SRR2089612, SRR2089614, SRR2089615, SRR2089619, SRR2089621, SRR2089633, SRR2089635, SRR2089637, SRR2089638, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646 chr2 27985481 27985496 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000086425.9, F730016J06Rik ENSMUST00000245895.1, ENSMUST00000245966.1, ENSMUST00000126140.8, ENSMUST00000156508.2 ENCFF102BWR, ENCFF993QUE, ENCFF023MKT, ENCFF970VKB chr2 28241324 28241325 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000026833.19, ENSMUSG00000035829.14, Olfm1, Ppp1r26 SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089646, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr2 28298339 28298340 + Predicted SINE|B2|B3 ENSMUSG00000026833.19, ENSMUSG00000035829.14, Olfm1, Ppp1r26 SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089649, SRR2089650, SRR2089651 chr2 29778977 29779100 + Annotated SINE|Alu|PB1D9 NM_001355137.1 ENCFF002FAG, ENCFF022FSI, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF130KZZ, ENCFF140VGY, ENCFF178PMH, ENCFF178ZVU, ENCFF196PBF, ENCFF198NQV, ENCFF297BEX, ENCFF460NGS, ENCFF527VIY, ENCFF533JUU, ENCFF565YHF, ENCFF667FDW, ENCFF671ERF, ENCFF745HSV, ENCFF775BPV, ENCFF808XFI, ENCFF881TID, ENCFF931PFF, ENCFF222GPK, ENCFF296VFB, ENCFF374YTS, ENCFF572TOH, ENCFF632LPV, ENCFF654AEJ, ENCFF914YDJ, ENCFF962OCF, ENCFF027GCQ, ENCFF052RNG, ENCFF150HVU, ENCFF151XBP, ENCFF157IFW, ENCFF166UTY, ENCFF235HER, ENCFF260UQJ, ENCFF275HRX, ENCFF276OPJ, ENCFF279EVY, ENCFF310WDZ, ENCFF338LFG, ENCFF433QNW, ENCFF490ULA, ENCFF505WKA, ENCFF505YPK, ENCFF572SQL, ENCFF594GIP, ENCFF632HDE, ENCFF644EGG, ENCFF655KBW, ENCFF696VQM, ENCFF696XZL, ENCFF775OZV, ENCFF804EWD, ENCFF817NCH, ENCFF898CAY, ENCFF903KDM, ENCFF916JWW, ENCFF956ZKG, ENCFF974KKD, ENCFF119IHT, ENCFF525QIM, ENCFF847LGC, SRR13142119, SRR5643192 chr2 30697190 30697191 - Predicted SINE|Alu|B1_Mm ENSMUSG00000044320.15, 1700001O22Rik DRR091689, DRR091691, DRR091693, DRR091694, DRR091695, SRR10697197, SRR10697198, SRR10697199, SRR13142118, SRR13142119, SRR13142122, SRR15198217, SRR15198218, SRR15198221, SRR2927111, SRR2927112, SRR6338004, SRR9080662, SRR9178976, SRR9178978, SRR9178979, SRR9178989, SRR9178990, SRR9178991 chr2 30935440 30935455 - Predicted SINE|Alu|PB1D9 ENSMUSG00000075415.14, Fnbp1 ENCFF698LQF, ENCFF960LQP, ENCFF118PQI, ENCFF134PXJ, ENCFF184ALY, ENCFF409ABB, ENCFF420REU, ENCFF668SQN, ENCFF694EPZ, ENCFF696TTO, ENCFF724VJN, ENCFF796TQV, ENCFF883APB, ENCFF984QED chr2 30950464 30950465 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000121206.1, ENSMUSG00000121206 ENSMUST00000247452.1 chr2 31364719 31364721 + Predicted LINE|CR1|L3 ENSMUSG00000076441.10, Ass1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTN, ENCFF002DMZ, ENCFF002DNB, ENCFF002ERW, ENCFF048FGD, ENCFF051JSS, ENCFF102BWR, ENCFF205GJI, ENCFF212ZXS, ENCFF218HNK, ENCFF305IXM, ENCFF345OIF, ENCFF381JXP, ENCFF450WAV, ENCFF502ANK, ENCFF670CXH, ENCFF775BPV, ENCFF836JVX, ENCFF935XRF, ENCFF993QUE, ENCFF013CHH, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF115LWP, ENCFF148XRK, ENCFF156YWS, ENCFF173IVH, ENCFF195JLT, ENCFF199ZDO, ENCFF223BXU, ENCFF233IFH, ENCFF251WZA, ENCFF274ESJ, ENCFF315OOH, ENCFF335ZSA, ENCFF345BBC, ENCFF385UBP, ENCFF455DHP, ENCFF467LJD, ENCFF532UKS, ENCFF572TOH, ENCFF581KUX, ENCFF604SXL, ENCFF608LAL, ENCFF609ZVL, ENCFF657UWH, ENCFF683CWD, ENCFF725ATS, ENCFF728TXU, ENCFF737OUQ, ENCFF766LGO, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF838YLT, ENCFF845NXM, ENCFF868WEJ, ENCFF912MUD, ENCFF933KQV, ENCFF962OCF, ENCFF970VKB, ENCFF053NFR, ENCFF083IRL, ENCFF085RPW, ENCFF116QKZ, ENCFF126WDH, ENCFF194DAO, ENCFF197OUM, ENCFF199AAD, ENCFF235HER, ENCFF275HRX, ENCFF280LCC, ENCFF291SCS, ENCFF299ENO, ENCFF313IFI, ENCFF334XFS, ENCFF359DNK, ENCFF390AUP, ENCFF426FAF, ENCFF429TQT, ENCFF490ULA, ENCFF596INO, ENCFF615ULR, ENCFF619SKV, ENCFF655CUI, ENCFF689ZLL, ENCFF716NXU, ENCFF766UJI, ENCFF820JMO, ENCFF869DVY, ENCFF949QCF, ENCFF956ZKG, ENCFF306ADU, ENCFF342GAL, ENCFF454JTI, ENCFF667KKO, ENCFF671TUD, ENCFF716YKR, ENCFF803OIY, ENCFF827NYZ, ENCFF911OIZ, DRR091688, DRR091690, DRR091691, DRR091693, DRR091698, DRR091699, SRR11428467, SRR11428469, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004 chr2 33803750 33803752 - Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000121186.1, ENSMUSG00000121186 ENSMUST00000247437.1, ENSMUST00000247487.1, ENSMUST00000247409.1, ENSMUST00000247509.1 ENCFF102BWR, ENCFF450WAV, ENCFF993QUE, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF455DHP, ENCFF609ZVL, ENCFF970VKB chr2 34645218 34645281 - Annotated LINE|CR1|L3 ENSMUSG00000026867.20, Gapvd1 ENSMUST00000102800.9, NM_001356441.1, NM_025709.3, NR_151469.1 ENCFF001NCP, ENCFF001NDZ, ENCFF002DMZ, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005NBP, ENCFF022FSI, ENCFF040EEJ, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF091WMS, ENCFF092YWY, ENCFF102BWR, ENCFF114PSQ, ENCFF115KZV, ENCFF121BYS, ENCFF130KZZ, ENCFF133PEB, ENCFF139MHN, ENCFF178ZVU, ENCFF181RDS, ENCFF186RYS, ENCFF214IUN, ENCFF221JNS, ENCFF225MMR, ENCFF262URV, ENCFF264DCN, ENCFF279BVM, ENCFF297CWJ, ENCFF319INV, ENCFF326TQL, ENCFF344LNZ, ENCFF345OIF, ENCFF379JPQ, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF403ORF, ENCFF420RFN, ENCFF421SNO, ENCFF450WAV, ENCFF453XOG, ENCFF527VIY, ENCFF552NWL, ENCFF581WWO, ENCFF585YYC, ENCFF590NVM, ENCFF593RAV, ENCFF641QXI, ENCFF670CXH, ENCFF670YKO, ENCFF705JRV, ENCFF727WWV, ENCFF743RQJ, ENCFF745HSV, ENCFF761RKP, ENCFF775RSS, ENCFF784LWT, ENCFF787LWL, ENCFF793STU, ENCFF802GAN, ENCFF828WIK, ENCFF849GVQ, ENCFF865WQE, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF951MOU, ENCFF989HJD, ENCFF991TPB, ENCFF013CHH, ENCFF923VUD, ENCFF002SZY, ENCFF014CMK, ENCFF022ACG, ENCFF047LTH, ENCFF085RPW, ENCFF087IUJ, ENCFF116QKZ, ENCFF118YHP, ENCFF124SSE, ENCFF128CYW, ENCFF136TYP, ENCFF141YUD, ENCFF143RTP, ENCFF163BDT, ENCFF166UTY, ENCFF222MKT, ENCFF260UQJ, ENCFF268ZHE, ENCFF277JGD, ENCFF286GUQ, ENCFF297PPT, ENCFF308WGP, ENCFF338LFG, ENCFF387BVS, ENCFF411YXB, ENCFF422ZNC, ENCFF429ZEH, ENCFF437QAE, ENCFF437ZSM, ENCFF454DOT, ENCFF466RIS, ENCFF478BEL, ENCFF483KXD, ENCFF484PQK, ENCFF490ULA, ENCFF505PJK, ENCFF505WKA, ENCFF524PAV, ENCFF529LEZ, ENCFF552KEA, ENCFF561CZI, ENCFF565YJQ, ENCFF576EOD, ENCFF581ZWM, ENCFF591WVP, ENCFF598WAL, ENCFF614WCH, ENCFF619SKV, ENCFF620FXM, ENCFF644EGG, ENCFF644GYU, ENCFF661UPO, ENCFF680WIN, ENCFF698WQO, ENCFF705CES, ENCFF707HQI, ENCFF716NXU, ENCFF727EPG, ENCFF757JMT, ENCFF765AQX, ENCFF801SNQ, ENCFF806MTS, ENCFF812QQI, ENCFF817HZQ, ENCFF817NCH, ENCFF840DKD, ENCFF864DTX, ENCFF896XAZ, ENCFF903KDM, ENCFF926FRX, ENCFF932XKS, ENCFF938XTE, ENCFF962ZCT, ENCFF996WVL, ENCFF510AYI, SRR5643192 chr2 3469600 3469651 + Annotated LINE|L2|L2 ENSMUSG00000085043.2, Gm13184 ENSMUST00000149932.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198221, SRR15198223, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080665, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178985 chr2 34991554 34991556 - Annotated LTR|ERVK|RMER4A ENSMUSG00000035875.16, AI182371 ENSMUST00000154817.2, NR_166659.1 chr2 34998894 34998895 + Predicted SINE|B2|B3 ENSMUSG00000057110.16, Cntrl ENCFF001NDA, ENCFF206EGD, ENCFF367BBB, ENCFF177LXI, ENCFF406NLL, ENCFF429ZEH, ENCFF858OFI, SRR11428469, SRR9178990 chr2 35114364 35114378 + Predicted LTR|ERVK|MLTR18D_MM ENSMUSG00000026879.15, ENSMUSG00000084768.3, Gsn, Gm13605 DRR091689, DRR091690, DRR091691, DRR091698, DRR091699, SRR10697195, SRR10697198, SRR10697199, SRR10697203, SRR11428468, SRR11428470, SRR13142121, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927113, SRR3178204, SRR9080665, SRR9178976, SRR9178982, SRR9178983, SRR9178984, SRR9178987, SRR9178991 chr2 35114545 35114546 + Annotated LTR|ERVK|MLTR18D_MM ENSMUSG00000084768.3, Gm13605 ENSMUST00000124489.3 DRR091688, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, SRR10697196, SRR10697200, SRR10697201, SRR10697202, SRR11428467, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR3178205, SRR3178206, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991 chr2 35156756 35156757 + Annotated LINE|CR1|L3 NM_001206369.1 ENCFF102BWR, ENCFF192NVI, ENCFF489IGD, ENCFF585YYC, ENCFF858CRT, ENCFF733MXU, ENCFF772QLP, ENCFF779MMO, ENCFF866IHG, ENCFF399XUL, ENCFF499CDP, ENCFF653QJY chr2 35870223 35870276 - Predicted SINE|B2|B3 ENSMUSG00000026885.14, Ttll11 ENCFF002EZU, ENCFF002EZY, ENCFF271OHB, ENCFF747XPP, ENCFF119IHT, ENCFF803OIY, ENCFF847LGC, ENCFF970VKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 38569334 38569335 - Predicted LINE|L1|L1_Mur3 ENSMUSG00000026751.15, Nr5a1 SRR2089603, SRR2089610, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089634 chr2 38582168 38582169 - Predicted LINE|L1|Lx8 ENSMUSG00000026751.15, Nr5a1 SRR2089603, SRR2089611, SRR2089613, SRR2089620, SRR2089621, SRR2089630, SRR2089632, SRR2089637, SRR2089639, SRR2089640, SRR2089651 chr2 38746747 38746748 - Predicted DNA|hAT-Charlie|URR1A ENSMUSG00000063972.14, Nr6a1 SRR2089603, SRR2089604, SRR2089635, SRR2089645, SRR2089646 chr2 40090032 40090033 - Predicted LINE|L1|L1MdF_III ENSMUSG00000084285.2, Gm13451 ENCFF086ZMV, ENCFF162UVS, ENCFF024CUG, ENCFF142PTA, ENCFF524FJG, ENCFF601JTS, ENCFF640RWH, ENCFF696VQM, ENCFF814TTQ, ENCFF818ZJQ, ENCFF996AOW chr2 40090107 40090108 - Predicted LINE|L1|L1MdF_III ENSMUSG00000084285.2, Gm13451 ENCFF086ZMV, ENCFF162UVS, ENCFF883UYA, ENCFF024CUG, ENCFF142PTA, ENCFF143RTP, ENCFF420REU, ENCFF464KYQ, ENCFF524FJG, ENCFF538ZTW, ENCFF601JTS, ENCFF640RWH, ENCFF696VQM, ENCFF711XWR, ENCFF814TTQ, ENCFF817HZQ, ENCFF818ZJQ, ENCFF858OFI, ENCFF910CTW, ENCFF996AOW chr2 40090183 40090184 - Predicted LINE|L1|L1MdF_III ENSMUSG00000084285.2, Gm13451 ENCFF086ZMV, ENCFF883UYA, ENCFF024CUG, ENCFF143RTP, ENCFF420REU, ENCFF464KYQ, ENCFF538ZTW, ENCFF640RWH, ENCFF696VQM, ENCFF711XWR, ENCFF814TTQ, ENCFF817HZQ, ENCFF818ZJQ, ENCFF858OFI, ENCFF910CTW, ENCFF996AOW chr2 43018752 43018753 + Annotated Retroposon|L1-dep|RMER1A NR_166451.1 chr2 43085690 43085719 + Annotated LINE|L1|Lx5 ENSMUSG00000121171.1, ENSMUSG00000121171 ENSMUST00000247374.1, ENSMUST00000247448.1 ENCFF001NCR, ENCFF001NEC, ENCFF001RTD, ENCFF001RTJ, ENCFF001RTN, ENCFF002FAE, ENCFF002FAG, ENCFF089PFT, ENCFF116MYR, ENCFF121OLG, ENCFF178ZVU, ENCFF297BEX, ENCFF326TQL, ENCFF420RFN, ENCFF421SNO, ENCFF489IGD, ENCFF521IDK, ENCFF527VIY, ENCFF670CXH, ENCFF696TCH, ENCFF761RKP, ENCFF915FID, ENCFF993QUE, ENCFF516BTG, ENCFF083IRL, ENCFF133KGZ, ENCFF291SCS, ENCFF490ULA, ENCFF505PJK, ENCFF869DVY, ENCFF956ZKG, ENCFF994PPZ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904684, SRR6904685, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 44704284 44704285 + Predicted LINE|L1|Lx7 ENSMUSG00000083849.2, Gm13477 SRR2089635, SRR2089647, SRR2089650 chr2 44706288 44706289 + Predicted LINE|L1|Lx7 ENSMUSG00000083849.2, Gm13477 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 45586588 45586618 + Annotated LTR|ERVK|RLTR17 ENSMUSG00000086202.2, 1700019E08Rik ENSMUST00000153567.2, NR_040497.1 ENCFF696TCH, DRR091693, SRR10697196, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178991, SRR9178992 chr2 4942201 4942202 + Predicted SINE|Alu|B1_Mur4 ENSMUSG00000026664.8, Phyh ENCFF040EEJ, ENCFF727WWV, ENCFF794FBC, ENCFF876MJS, ENCFF902GVX, ENCFF934ULS, ENCFF039DES, ENCFF522KWW, ENCFF806MTS, ENCFF896XAZ, ENCFF907KCF, ENCFF951PCM chr2 4998067 4998068 - Annotated SINE|Alu|PB1D7 ENSMUSG00000026669.15, Mcm10 ENSMUST00000139882.8 ENCFF106GQS chr2 52268606 52268607 + Annotated LTR|ERVL-MaLR|MTC NR_166117.1 ENCFF001RTD, ENCFF001RTN chr2 53586881 53586882 - Annotated LINE|L1|L1_Mur2 NR_169308.1 chr2 5959390 5959434 + Predicted SINE|MIR|MIRb ENSMUSG00000043241.15, Upf2 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091696, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198220, SRR15198224, SRR15198225, SRR2040601, SRR2927113, SRR9178976, SRR9178977, SRR9178979, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 59783208 59783232 - Predicted SINE|MIR|MIR3 ENSMUSG00000026987.17, Baz2b DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178992 chr2 59991879 59991880 - Predicted LINE|L1|L1MEf ENSMUSG00000026987.17, Baz2b ENCFF002ERW, ENCFF002EZU, ENCFF450WAV, ENCFF296VFB, ENCFF500QZK, ENCFF604SXL, ENCFF728TXU, ENCFF845NXM, DRR091689, SRR10697195, SRR13142121, SRR6338004 chr2 60114471 60114711 - Predicted LINE|L1|L1MC4a ENSMUSG00000060703.13, Cd302 ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTN, ENCFF002EZU, ENCFF002EZW, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF083BIG, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF225MMR, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF289WHW, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF445BBH, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521IDK, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF552NWL, ENCFF564OKH, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF605IFN, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF643VPC, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF686EWL, ENCFF696TCH, ENCFF707QJV, ENCFF711WAC, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793CWJ, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF865WQE, ENCFF868XLZ, ENCFF878SQO, ENCFF880FYC, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF970JWC, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065TCZ, ENCFF101BDM, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199ZDO, ENCFF223BXU, ENCFF234LUQ, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF315OOH, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF355AMN, ENCFF364LFJ, ENCFF369YLA, ENCFF377LAC, ENCFF394BDJ, ENCFF408NBX, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF454ZUS, ENCFF455DHP, ENCFF467LJD, ENCFF468AKL, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF521NCL, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF587VDB, ENCFF588DUN, ENCFF595WXV, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF643XFK, ENCFF651SDJ, ENCFF657FNE, ENCFF657OJR, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF818BAS, ENCFF829RHM, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854MWX, ENCFF855FCX, ENCFF862FYE, ENCFF912MUD, ENCFF923VUD, ENCFF924LPZ, ENCFF933MOZ, ENCFF943XKB, ENCFF952BCB, ENCFF962OCF, ENCFF970VKB, ENCFF975NCY, ENCFF002SZY, ENCFF003GJV, ENCFF004AEL, ENCFF009AON, ENCFF014CMK, ENCFF015JJB, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF061WTN, ENCFF065UBR, ENCFF065ZIE, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF080REY, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF103SQR, ENCFF106RLX, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF142PTA, ENCFF149BQJ, ENCFF150HVU, ENCFF151XBP, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF222MKT, ENCFF235HER, ENCFF237JCE, ENCFF239RQP, ENCFF243LBQ, ENCFF243TPB, ENCFF249LSC, ENCFF258WLS, ENCFF260UQJ, ENCFF267KZS, ENCFF268ZHE, ENCFF272VMY, ENCFF275HRX, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF303BIV, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF371ZDG, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF403CRC, ENCFF404HLB, ENCFF406LFV, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF420REU, ENCFF421DHQ, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF430ERW, ENCFF437ZSM, ENCFF454DOT, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF591WVP, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF644GYU, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF656DRS, ENCFF657NUT, ENCFF661UPO, ENCFF672WYO, ENCFF673GRZ, ENCFF680WIN, ENCFF685FUZ, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF698WQO, ENCFF698XCB, ENCFF700IPC, ENCFF705CES, ENCFF707HQI, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF755REI, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF790WIY, ENCFF796TQV, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF816CPX, ENCFF819JGD, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF843WRN, ENCFF845NUY, ENCFF854LJN, ENCFF855UFX, ENCFF858OFI, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF910CTW, ENCFF916JWW, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF932XKS, ENCFF934VFW, ENCFF936LNA, ENCFF938XTE, ENCFF949QCF, ENCFF953POL, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF974XWJ, ENCFF983GRF, ENCFF994PPZ, ENCFF996WVL, ENCFF998BIQ, ENCFF999ZYF, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF306ADU, ENCFF342GAL, ENCFF366CUG, ENCFF399XUL, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF499CDP, ENCFF555BQD, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF667KKO, ENCFF670VVN, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF782WDV, ENCFF803OIY, ENCFF827NYZ, ENCFF888IIL, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666 chr2 61363828 61363831 + Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000121191.1, ENSMUSG00000121191 ENSMUST00000247419.1, ENSMUST00000247562.1 ENCFF002EZU chr2 6476795 6476878 + Annotated LTR|ERVL-MaLR|MLT1C ENSMUSG00000086109.4, Gm13391 ENSMUST00000147685.2, ENSMUST00000247321.1, ENSMUST00000246933.1 ENCFF022FSI, ENCFF023RRS, ENCFF027IIP, ENCFF048IBL, ENCFF051JSS, ENCFF059IQN, ENCFF090USB, ENCFF091WMS, ENCFF104LLO, ENCFF115KZV, ENCFF121OLG, ENCFF125HRQ, ENCFF133PEB, ENCFF138QRF, ENCFF139MHN, ENCFF142CUS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF184EAT, ENCFF207OVG, ENCFF221JIC, ENCFF262URV, ENCFF264DCN, ENCFF269UZL, ENCFF274WSX, ENCFF296ASE, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF319INV, ENCFF326TQL, ENCFF330IYN, ENCFF330LWU, ENCFF345OIF, ENCFF348VIH, ENCFF351JWR, ENCFF367BBB, ENCFF375EMG, ENCFF385MVU, ENCFF390QUP, ENCFF393YET, ENCFF403ORF, ENCFF421SNO, ENCFF422ATU, ENCFF462ABU, ENCFF470MXU, ENCFF480BVV, ENCFF491XRO, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF522VLI, ENCFF524EDD, ENCFF535YBP, ENCFF548SLN, ENCFF564OKH, ENCFF564YPB, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF621PKT, ENCFF623BKO, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF711WAC, ENCFF725RXU, ENCFF761RKP, ENCFF780TUN, ENCFF787LWL, ENCFF789LUC, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF841OXD, ENCFF851ESH, ENCFF865WQE, ENCFF878SQO, ENCFF880FYC, ENCFF886XAI, ENCFF907HVO, ENCFF917RNE, ENCFF922KQY, ENCFF931HCN, ENCFF933UPG, ENCFF937GBW, ENCFF946AGD, ENCFF951MOU, ENCFF956WVJ, ENCFF989HJD, ENCFF991TPB, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF012HVN, ENCFF012KPC, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF027GCQ, ENCFF033DWC, ENCFF037IZV, ENCFF043DTH, ENCFF049SEE, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF066MTU, ENCFF070YMI, ENCFF073RJJ, ENCFF083IRL, ENCFF085RPW, ENCFF087OKI, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF095NMU, ENCFF108JLQ, ENCFF111MWQ, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF140WZW, ENCFF150HVU, ENCFF158HQO, ENCFF162FTA, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF197TJB, ENCFF205CDI, ENCFF207HZS, ENCFF235HER, ENCFF237JCE, ENCFF243LBQ, ENCFF243TPB, ENCFF255ESE, ENCFF255XDN, ENCFF267KZS, ENCFF268ZHE, ENCFF276OPJ, ENCFF278JAU, ENCFF279EVY, ENCFF296UDD, ENCFF302MXO, ENCFF306FQJ, ENCFF315OFF, ENCFF320CXH, ENCFF321NRW, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF350PHR, ENCFF353SEU, ENCFF357QTB, ENCFF363PDR, ENCFF369VAI, ENCFF374VAZ, ENCFF380BYT, ENCFF380LXU, ENCFF386HCR, ENCFF390ZZH, ENCFF399TOF, ENCFF399YLV, ENCFF403RPK, ENCFF409ABB, ENCFF411KCB, ENCFF423GTP, ENCFF426ETE, ENCFF426ZCK, ENCFF430ERW, ENCFF456GLS, ENCFF458EUS, ENCFF469JWF, ENCFF476JSK, ENCFF482VRF, ENCFF483SQS, ENCFF490ULA, ENCFF504PGI, ENCFF505WKA, ENCFF507VMW, ENCFF512XKX, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF538TFM, ENCFF541HSQ, ENCFF548JDU, ENCFF552KEA, ENCFF578PSU, ENCFF581ZWM, ENCFF584OOK, ENCFF596INO, ENCFF598BFX, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF618PVF, ENCFF619SKV, ENCFF632HDE, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF644EGG, ENCFF647KBV, ENCFF661TOM, ENCFF667RGF, ENCFF689RQK, ENCFF691DJE, ENCFF699SBZ, ENCFF705CES, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF742DJH, ENCFF743NNG, ENCFF749XRU, ENCFF751QWY, ENCFF758BKM, ENCFF775OZV, ENCFF781MKK, ENCFF786BUI, ENCFF796TQV, ENCFF801SNQ, ENCFF804EWD, ENCFF806XNV, ENCFF817NCH, ENCFF834TQY, ENCFF838BEV, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF877VSZ, ENCFF886UAF, ENCFF894COY, ENCFF898CAY, ENCFF904KCQ, ENCFF921PGH, ENCFF927LFD, ENCFF952EQQ, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958LRX, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF974KKD, ENCFF976SMI, ENCFF984QED, ENCFF994PPZ, ENCFF997QQG, ENCFF999ZYF chr2 65567723 65567746 + Predicted LINE|L1|L1MdF_III ENSMUSG00000075318.14, Scn2a DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091695, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198223, SRR15198225, SRR15198226, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904685, SRR9080665, SRR9178978, SRR9178984, SRR9178985, SRR9178991, SRR9178992 chr2 68488207 68488267 + Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000079324.12, 4932414N04Rik ENSMUST00000128259.9, ENSMUST00000112332.8, NM_183113.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 69552797 69552798 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000042133.17, Ppig ENCFF056GXQ, ENCFF116MYR, ENCFF415KCJ, ENCFF787LWL, ENCFF828WIK, ENCFF907HVO, ENCFF913CFN, ENCFF951MOU, ENCFF236TUH, ENCFF284AEN, ENCFF355AMN, ENCFF446FOZ, ENCFF478KOR, ENCFF487DYP, ENCFF573UIH, ENCFF694NRG, ENCFF808PVJ, ENCFF845NXM, ENCFF037IZV, ENCFF047LTH, ENCFF089SWU, ENCFF143RTP, ENCFF222MKT, ENCFF303BIV, ENCFF640RWH, ENCFF678CRA, ENCFF769FVU, ENCFF869MFM, ENCFF952EQQ, ENCFF366CUG, ENCFF477YHR, ENCFF667KKO, SRR9080665 chr2 69561836 69561837 + Predicted SINE|Alu|B1F1 ENSMUSG00000042133.17, Ppig ENCFF002ERU, ENCFF048FGD, ENCFF327MSM, ENCFF813ZJI, ENCFF728TXU, ENCFF818BAS, ENCFF673SLO, ENCFF934QGX, DRR091696, SRR15198218, SRR15198221, SRR15198225, SRR15198226, SRR15198228, SRR2927111, SRR2927112, SRR2927113 chr2 70363096 70363097 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000087264.2, Gad1os DRR091689, DRR091692, DRR091693, DRR091698, SRR10697196, SRR10697203, SRR11428468, SRR13142118, SRR15198228, SRR9178979, SRR9178981, SRR9178990, SRR9178992 chr2 71178306 71178307 + Annotated LTR|ERVK|RLTR16C_MM ENSMUSG00000121199.1, ENSMUSG00000121199 ENSMUST00000247431.1 chr2 71218665 71218666 + Predicted LTR|ERVL|MT2A ENSMUSG00000027018.12, Hat1 ENCFF014CMK, ENCFF194DAO, ENCFF685GDB, DRR091694, DRR091697, SRR11428469, SRR15198225, SRR2927112 chr2 72797845 72797861 - Predicted LINE|L1|L1MdA_IV ENSMUSG00000027109.17, Sp3 ENCFF136POG, ENCFF147GLI, ENCFF755IDE, ENCFF906FNQ, ENCFF960LQP, ENCFF972IVS, ENCFF012HVN, ENCFF013SNI, ENCFF037LEJ, ENCFF106RLX, ENCFF151XBP, ENCFF260UQJ, ENCFF310WDZ, ENCFF331YYO, ENCFF399TOF, ENCFF559QXN, ENCFF561CZI, ENCFF661UPO, ENCFF695XIY, ENCFF759HJA, ENCFF869MFM, ENCFF906CJJ, ENCFF974KKD chr2 72798074 72798075 - Predicted LINE|L1|L1MdA_IV ENSMUSG00000027109.17, Sp3 ENCFF262WAE, ENCFF455DHP, ENCFF970VKB, ENCFF039DES, ENCFF198XFF, ENCFF242MZE, ENCFF247VEN, ENCFF276OPJ, ENCFF507VMW, ENCFF883APB, ENCFF896XAZ, ENCFF917KUH, ENCFF178HDG, ENCFF477YHR, ENCFF582WGH chr2 73248990 73248991 + Predicted SINE|B2|B3 ENSMUSG00000087176.2, D230022J07Rik SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089623, SRR2089629, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 73701029 73701030 - Predicted LINE|L1|L1M5 ENSMUSG00000027104.19, Atf2 ENCFF002DNB, ENCFF106GQS, ENCFF885AJK, ENCFF254TFB, SRR6904683 chr2 73741971 73741972 - Predicted SINE|B4|ID_B1 ENSMUSG00000018770.10, Atp5g3 ENCFF644EGG, ENCFF743NNG, ENCFF817HZQ, ENCFF186VNL, ENCFF277QHC, ENCFF302TQH, ENCFF349AIG, ENCFF510IAG, ENCFF720MPJ, DRR091690, DRR091691, SRR9080666, SRR9178976, SRR9178978, SRR9178982, SRR9178985, SRR9178988, SRR9178989 chr2 73742768 73742804 - Predicted LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000018770.10, Atp5g3 ENCFF001NCP, ENCFF001RTF, ENCFF178ZVU, ENCFF385MVU, ENCFF450WAV, ENCFF489IGD, ENCFF874ELO, ENCFF084CWD, ENCFF115LWP, ENCFF143BIC, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF315OOH, ENCFF330FNX, ENCFF339MSB, ENCFF364LFJ, ENCFF442FJC, ENCFF446FOZ, ENCFF510LAE, ENCFF521NCL, ENCFF581KUX, ENCFF608LAL, ENCFF609KQB, ENCFF651SDJ, ENCFF657OJR, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF697AST, ENCFF737OUQ, ENCFF754TOT, ENCFF826RUZ, ENCFF834VIK, ENCFF838YLT, ENCFF854KNE, ENCFF943XKB, ENCFF952BCB, ENCFF975NCY, ENCFF334XFS, ENCFF197NCG, ENCFF242SVY, ENCFF260KJY, ENCFF306ADU, ENCFF342GAL, ENCFF366CUG, ENCFF454JTI, ENCFF481CFU, ENCFF555BQD, ENCFF667KKO, ENCFF715CAJ, ENCFF827NYZ, ENCFF906OAF chr2 74137598 74137599 - Predicted SINE|B4|RSINE1 ENSMUSG00000085405.2, 4930441J16Rik SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR3178205, SRR5643192, SRR6904684, SRR6904685 chr2 74138053 74138074 - Annotated SINE|ID|ID4 ENSMUSG00000085405.2, 4930441J16Rik ENSMUST00000153743.2, NR_040501.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 74422252 74422253 - Annotated SINE|B2|B2_Mm2 ENSMUSG00000075279.6, Mrpl23-ps1 ENSMUST00000173086.2 chr2 75464373 75464380 + Annotated LTR|ERVK|RMER20B ENSMUSG00000121212.1, ENSMUSG00000121212 ENSMUST00000247606.1, ENSMUST00000247464.1 ENCFF001NDA, ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr2 75495373 75495403 + Predicted LTR|ERVK|RLTR19-int ENSMUSG00000059005.14, Hnrnpa3 ENCFF002ERU, ENCFF048FGD, ENCFF051JGE, ENCFF059IQN, ENCFF084DCW, ENCFF089WMB, ENCFF102BWR, ENCFF115KZV, ENCFF116MYR, ENCFF140VGY, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF189WYV, ENCFF214IUN, ENCFF261OTH, ENCFF262URV, ENCFF274WSX, ENCFF305IXM, ENCFF326TQL, ENCFF345OIF, ENCFF358UFZ, ENCFF371VGE, ENCFF375EMG, ENCFF420RFN, ENCFF437AJW, ENCFF450WAV, ENCFF470MXU, ENCFF482MUH, ENCFF514BEA, ENCFF564OKH, ENCFF575RUC, ENCFF593RAV, ENCFF625JLB, ENCFF670CXH, ENCFF782JNB, ENCFF802GAN, ENCFF808XFI, ENCFF836JVX, ENCFF880FYC, ENCFF885AJK, ENCFF931DDH, ENCFF934ZAP, ENCFF982BLT, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF060JCS, ENCFF067UCQ, ENCFF148XRK, ENCFF170XMM, ENCFF173IVH, ENCFF199IRM, ENCFF222GPK, ENCFF233IFH, ENCFF245ZOR, ENCFF247QZW, ENCFF269SRJ, ENCFF270ERO, ENCFF271OHB, ENCFF304DLW, ENCFF308FEA, ENCFF335ZSA, ENCFF374YTS, ENCFF408NBX, ENCFF448TTG, ENCFF487DYP, ENCFF654AEJ, ENCFF704WWK, ENCFF714CKE, ENCFF721BNO, ENCFF725ATS, ENCFF733MXU, ENCFF768ZCF, ENCFF854MWX, ENCFF855FCX, ENCFF886BRO, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF002SZY, ENCFF015JJB, ENCFF033DWC, ENCFF039DES, ENCFF041PJP, ENCFF049SEE, ENCFF065ZIE, ENCFF070YMI, ENCFF073RJJ, ENCFF083IRL, ENCFF126WDH, ENCFF131VEF, ENCFF133KGZ, ENCFF197OUM, ENCFF235HER, ENCFF243TPB, ENCFF267KZS, ENCFF278JAU, ENCFF280LCC, ENCFF299ENO, ENCFF302MXO, ENCFF338LFG, ENCFF343MIX, ENCFF346HDC, ENCFF352KGC, ENCFF357QTB, ENCFF369VAI, ENCFF378TYU, ENCFF390ZZH, ENCFF407JTK, ENCFF411KCB, ENCFF430ERW, ENCFF458EUS, ENCFF469JWF, ENCFF482VRF, ENCFF505PJK, ENCFF505WKA, ENCFF517EJZ, ENCFF563FUC, ENCFF565YJQ, ENCFF578PSU, ENCFF584OOK, ENCFF619SKV, ENCFF637CVI, ENCFF637PIP, ENCFF673GRZ, ENCFF680WIN, ENCFF689UNV, ENCFF707HQI, ENCFF713JXV, ENCFF751QWY, ENCFF801SNQ, ENCFF838BEV, ENCFF877VSZ, ENCFF921PGH, ENCFF934VFW, ENCFF938XTE, ENCFF946LMX, ENCFF955YCX, ENCFF959CWA, ENCFF970WCD, ENCFF994PPZ, ENCFF008XVO, ENCFF075EMK, ENCFF277QHC, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF399XUL, ENCFF446LMP, ENCFF499CDP, ENCFF510IAG, ENCFF569XGG, ENCFF626KIV, ENCFF670VVN, ENCFF716YKR, ENCFF728WJB, ENCFF782WDV, ENCFF932SOZ, ENCFF970VKL, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR6904683, SRR6904684, SRR6904685 chr2 75495579 75495580 + Predicted LTR|ERVK|RLTR19-int ENSMUSG00000059005.14, Hnrnpa3 ENCFF048FGD, ENCFF051JGE, ENCFF089WMB, ENCFF143PHU, ENCFF221NAP, ENCFF327MSM, ENCFF502ANK, ENCFF836JVX, ENCFF885AJK, ENCFF197OUM, ENCFF383AJS, ENCFF389ZWR, ENCFF407JTK, ENCFF565YJQ, ENCFF689ZLL, ENCFF894SHM, SRR3178205 chr2 75535886 75535893 - Predicted DNA|hAT-Charlie|URR1A ENSMUSG00000015839.7, Nfe2l2 ENCFF453XOG, ENCFF710DAI, ENCFF956WVJ, ENCFF970JWC, ENCFF377LAC, ENCFF532UKS, ENCFF016CHX, ENCFF082OML, ENCFF162FTA, ENCFF399TOF, ENCFF414IHO, ENCFF422ZNC, ENCFF456GLS, ENCFF881YOK, ENCFF970PLY, ENCFF260KJY, DRR091695, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR11428467, SRR13142118, SRR13142120, SRR15198218, SRR15198219, SRR15198224, SRR15198228, SRR9178984, SRR9178991 chr2 76495586 76495652 - Annotated SINE|ID|ID4_v ENSMUSG00000002732.15, Fkbp7 ENSMUST00000154097.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR13142120, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR6904683, SRR6904685, SRR9080664, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178992 chr2 77551043 77551046 - Predicted DNA|TcMar-Tigger|Tigger16a ENSMUSG00000027016.18, Zfp385b ENCFF002EZY, ENCFF013CHH, ENCFF468AKL, ENCFF510TTU, ENCFF657UWH, ENCFF804UQS, ENCFF818BAS, ENCFF829RHM, DRR091689, DRR091693, DRR091697, DRR091698, SRR13142122, SRR13142123, SRR5643199, SRR6338004, SRR9178979 chr2 78096554 78096579 + Annotated LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000054510.7, Gm14461 ENSMUST00000240622.1, ENSMUST00000240623.1, ENSMUST00000240624.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080665, SRR9080666, SRR9178977, SRR9178981, SRR9178982, SRR9178985 chr2 78123526 78123616 + Predicted LTR|ERVK|RMER19C ENSMUSG00000054510.7, Gm14461 ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF082HKQ, ENCFF083CUR, ENCFF084PUC, ENCFF086ZMV, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF104LLO, ENCFF105KSL, ENCFF106RGV, ENCFF107XGE, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF147GLI, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF205GJI, ENCFF207DLW, ENCFF207OVG, ENCFF210BCB, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF229AIZ, ENCFF234MZC, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF264RIV, ENCFF265LKR, ENCFF269UZL, ENCFF273CJD, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF284OMO, ENCFF287KDR, ENCFF289WHW, ENCFF295SYY, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330IYN, ENCFF330LWU, ENCFF331WKS, ENCFF332ZPO, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF358UFZ, ENCFF363CYZ, ENCFF366BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF400XLQ, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF422ATU, ENCFF432ZLQ, ENCFF439OFV, ENCFF443PSO, ENCFF449MIK, ENCFF453XOG, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF472YPG, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF486NGU, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521UGJ, ENCFF522VLI, ENCFF524EDD, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF535YBP, ENCFF544BEF, ENCFF548SLN, ENCFF552DRF, ENCFF552NWL, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570GTP, ENCFF581WWO, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF605IFN, ENCFF608NVM, ENCFF621PKT, ENCFF622NXP, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF643VPC, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764TGO, ENCFF764ZUI, ENCFF771LLL, ENCFF771YNG, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF787LWL, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793STU, ENCFF794FBC, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844KCR, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CTQ, ENCFF863RVB, ENCFF865WQE, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF906FNQ, ENCFF907HVO, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF925ONP, ENCFF931DDH, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF970JWC, ENCFF970XZM, ENCFF972IVS, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF994BOT, ENCFF996STG, ENCFF002SZY, ENCFF004AEL, ENCFF008YSM, ENCFF009AON, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF027GCQ, ENCFF027QGO, ENCFF030IFE, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF039DES, ENCFF039PJR, ENCFF041PJP, ENCFF043DTH, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF060FGD, ENCFF061WTN, ENCFF065UBR, ENCFF065ZIE, ENCFF066MTU, ENCFF066UDR, ENCFF068CQU, ENCFF068KDU, ENCFF070YMI, ENCFF073RJJ, ENCFF077YZF, ENCFF078CCF, ENCFF080BTV, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF087XKQ, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF095NMU, ENCFF098AYQ, ENCFF098TCZ, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF116QKZ, ENCFF118PQI, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF127DCC, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134VWD, ENCFF136DUH, ENCFF136TYP, ENCFF137OYQ, ENCFF141YUD, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF167GWU, ENCFF169JOQ, ENCFF170KWW, ENCFF172DMS, ENCFF174EGP, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF187BHR, ENCFF189BIW, ENCFF192XJA, ENCFF194DAO, ENCFF197TJB, ENCFF198XFF, ENCFF199AAD, ENCFF201IQS, ENCFF203EWG, ENCFF205CDI, ENCFF207HZS, ENCFF207RVA, ENCFF208BJY, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF222MKT, ENCFF228CMT, ENCFF229CPV, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF240OIM, ENCFF242MZE, ENCFF243LBQ, ENCFF248XZC, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF257EYD, ENCFF258WLS, ENCFF260BJB, ENCFF260UQJ, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF268YSJ, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF292KWK, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF306OWL, ENCFF310BWG, ENCFF310HAL, ENCFF310WDZ, ENCFF311MZV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332IRR, ENCFF332RWQ, ENCFF335UNU, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF346NGU, ENCFF346UBA, ENCFF347EUO, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF366CSN, ENCFF369VAI, ENCFF371ZDG, ENCFF374VAZ, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF386HCR, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF414IHO, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF421DHQ, ENCFF422CQE, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF427YDU, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF438ROC, ENCFF439BEV, ENCFF440IAL, ENCFF450CUC, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF466RIS, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF486GBM, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF515GXB, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF519AKK, ENCFF524FJG, ENCFF529LEZ, ENCFF530DUT, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZFC, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF538ZTW, ENCFF541HSQ, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF565FFU, ENCFF566HCI, ENCFF569ELL, ENCFF572JDP, ENCFF572SQL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF580KHN, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF585CYT, ENCFF588JAU, ENCFF591WVP, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF613SEJ, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647KBV, ENCFF647RUH, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF661TOM, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF668SQN, ENCFF669PMR, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF673SLO, ENCFF673ZDG, ENCFF680OWA, ENCFF680WIN, ENCFF681EEO, ENCFF685FUZ, ENCFF687STH, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF694EPZ, ENCFF695XIY, ENCFF696QTS, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF717GIT, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF740TFX, ENCFF740WXS, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF754VQW, ENCFF755REI, ENCFF756QJD, ENCFF758BKM, ENCFF758JNE, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF779MMO, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF798TFC, ENCFF801SNQ, ENCFF803ZUN, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF825JNK, ENCFF829WND, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF845NUY, ENCFF847IGW, ENCFF853PNO, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF861RRQ, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF886UAF, ENCFF894COY, ENCFF896XAZ, ENCFF898CAY, ENCFF900AIQ, ENCFF903KDM, ENCFF903ULI, ENCFF904KCQ, ENCFF906CJJ, ENCFF916BSM, ENCFF916JWW, ENCFF921PGH, ENCFF926FRX, ENCFF927LFD, ENCFF930JCE, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF934VFW, ENCFF937KFC, ENCFF938CNS, ENCFF938XTE, ENCFF939QLN, ENCFF944RHJ, ENCFF946LMX, ENCFF948BDY, ENCFF949QCF, ENCFF950FFF, ENCFF952EQQ, ENCFF952FJN, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955WXI, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF971DTR, ENCFF974KKD, ENCFF976SMI, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, SRR13142122 chr2 80026831 80026832 - Predicted LTR|ERVL-MaLR|MLT1G ENSMUSG00000059173.20, Pde1a DRR091691, DRR091695, DRR091696, SRR10697195, SRR10697197, SRR10697199, SRR10697200, SRR10697202, SRR15198225, SRR9178984, SRR9178986, SRR9178987, SRR9178990, SRR9178991 chr2 80467184 80467185 + Predicted LTR|ERVL-MaLR|MLT1D ENSMUSG00000026999.15, Nup35 DRR091692, DRR091697, SRR10697197, SRR11428468, SRR15198218, SRR15198219, SRR15198220, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR9178982 chr2 80530003 80530018 + Predicted LINE|L1|Lx9 ENSMUSG00000077404.3, Gm25420 DRR091688, DRR091689, DRR091691, DRR091693, DRR091695, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198221, SRR15198223, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 84307091 84307137 - Annotated LTR|ERVK|RLTR42 ENSMUSG00000027082.16, Tfpi ENSMUST00000111711.8, ENSMUST00000111714.8, ENSMUST00000090732.10, NM_001355273.1, NM_001355271.1, NM_001177319.1, NM_001177320.1 ENCFF001NDA, ENCFF001NDD, ENCFF001RTD, ENCFF001RTN, ENCFF002DND, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF027BYX, ENCFF043JGD, ENCFF048FGD, ENCFF048IBL, ENCFF059IQN, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF139MHN, ENCFF140VGY, ENCFF179WPT, ENCFF186RYS, ENCFF189WYV, ENCFF214IUN, ENCFF262URV, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF326TQL, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF351JWR, ENCFF363CYZ, ENCFF381JXP, ENCFF390QUP, ENCFF421SNO, ENCFF437AJW, ENCFF470MXU, ENCFF489IGD, ENCFF495YGN, ENCFF514BEA, ENCFF514JOV, ENCFF521IDK, ENCFF548SLN, ENCFF564OKH, ENCFF564YPB, ENCFF595GFM, ENCFF625JLB, ENCFF670CXH, ENCFF683RFI, ENCFF696TCH, ENCFF711WAC, ENCFF725RXU, ENCFF775BPV, ENCFF802GAN, ENCFF813GGJ, ENCFF841OXD, ENCFF851ESH, ENCFF865WQE, ENCFF874ELO, ENCFF878SQO, ENCFF880FYC, ENCFF933UPG, ENCFF937GBW, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF027RRZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF170XMM, ENCFF236TUH, ENCFF251WZA, ENCFF269WEZ, ENCFF270ERO, ENCFF284AEN, ENCFF304DLW, ENCFF339MSB, ENCFF390NKP, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF467LJD, ENCFF484HRX, ENCFF510LAE, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF608LAL, ENCFF651SDJ, ENCFF657UWH, ENCFF667SYQ, ENCFF686KMX, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF826RUZ, ENCFF840XYZ, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF920FVY, ENCFF923VUD, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF964WZW, ENCFF002SZY, ENCFF041PJP, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF073RJJ, ENCFF082BJV, ENCFF083IRL, ENCFF088SVK, ENCFF094RHV, ENCFF156XMZ, ENCFF187BHR, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF278JAU, ENCFF291SCS, ENCFF299ENO, ENCFF302KQL, ENCFF302MXO, ENCFF313IFI, ENCFF315OFF, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF357QTB, ENCFF369VAI, ENCFF380BYT, ENCFF390ZZH, ENCFF426ETE, ENCFF426FAF, ENCFF430ERW, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF490ULA, ENCFF530DUT, ENCFF536ZVF, ENCFF541HSQ, ENCFF591WVP, ENCFF596INO, ENCFF598WAL, ENCFF609WDV, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF644GYU, ENCFF673GRZ, ENCFF689UNV, ENCFF693POR, ENCFF723QWN, ENCFF743NNG, ENCFF751QWY, ENCFF769FVU, ENCFF801SNQ, ENCFF811ZQO, ENCFF830CBI, ENCFF834TQY, ENCFF855UFX, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF872SFD, ENCFF877VSZ, ENCFF900AIQ, ENCFF921PGH, ENCFF966VVA, ENCFF983GRF, ENCFF994PPZ, ENCFF999ZYF, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF306ADU, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF423TSB, ENCFF446LMP, ENCFF517DCU, ENCFF641WPY, ENCFF723MAR, DRR091689, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004 chr2 84361681 84361813 - Annotated LTR|ERVL-MaLR|MTEa ENSMUSG00000087362.9, Gm13710 ENSMUST00000139492.3 ENCFF005NBP, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HUJ, ENCFF075MGH, ENCFF083BIG, ENCFF084PUC, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF104LLO, ENCFF106RGV, ENCFF107XGE, ENCFF114PSQ, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF133PEB, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF147GLI, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF261OTH, ENCFF264DCN, ENCFF269UZL, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF283XKV, ENCFF284OMO, ENCFF289WHW, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF310HPH, ENCFF321BMO, ENCFF326TQL, ENCFF331WKS, ENCFF334RGJ, ENCFF344ILW, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF400XLQ, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF422ATU, ENCFF432ZLQ, ENCFF437AJW, ENCFF439OFV, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF494YXM, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF548SLN, ENCFF552NWL, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF575RUC, ENCFF585YYC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF643VPC, ENCFF654BXL, ENCFF670CXH, ENCFF683RFI, ENCFF686EWL, ENCFF704GEB, ENCFF710DAI, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF789LUC, ENCFF793CWJ, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF865WQE, ENCFF868XLZ, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896MQK, ENCFF902GVX, ENCFF907HVO, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF970JWC, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF014CMK, ENCFF015JJB, ENCFF023TPS, ENCFF027GCQ, ENCFF033DWC, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF053NFR, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF061WTN, ENCFF064VAD, ENCFF065ZIE, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF095NMU, ENCFF098TCZ, ENCFF116DGU, ENCFF116QKZ, ENCFF117ZMM, ENCFF118YHP, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF134VWD, ENCFF150HVU, ENCFF151XBP, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF170KWW, ENCFF172DMS, ENCFF175LCC, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF207HZS, ENCFF208BJY, ENCFF209RRO, ENCFF210BVU, ENCFF222MKT, ENCFF228CMT, ENCFF235HER, ENCFF237JCE, ENCFF239RQP, ENCFF243TPB, ENCFF254TFB, ENCFF255ESE, ENCFF258WLS, ENCFF260UQJ, ENCFF264PYB, ENCFF267KZS, ENCFF268ZHE, ENCFF273CBP, ENCFF275HRX, ENCFF277JGD, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF306FQJ, ENCFF306OWL, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF369VAI, ENCFF371ZDG, ENCFF378TYU, ENCFF380BYT, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF421DHQ, ENCFF422CQE, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF437QAE, ENCFF437ZSM, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF512XKX, ENCFF517EJZ, ENCFF524FJG, ENCFF530DUT, ENCFF531JWM, ENCFF536ZVF, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF558UDY, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584ZUK, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF644GYU, ENCFF646GBS, ENCFF647RUH, ENCFF655CUI, ENCFF656DRS, ENCFF657NUT, ENCFF661TOM, ENCFF673GRZ, ENCFF680OWA, ENCFF680WIN, ENCFF685FUZ, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF698WQO, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF758BKM, ENCFF765AQX, ENCFF765UBL, ENCFF769FVU, ENCFF780UQU, ENCFF781MKK, ENCFF789AOM, ENCFF791ZDR, ENCFF796TQV, ENCFF801SNQ, ENCFF804EWD, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF847IGW, ENCFF851JLX, ENCFF854LJN, ENCFF855UFX, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF900AIQ, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF932XKS, ENCFF934VFW, ENCFF938CNS, ENCFF938XTE, ENCFF949QCF, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958FDX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF994PPZ, ENCFF996AOW, ENCFF998BIQ, ENCFF999ZYF chr2 84916804 84916844 - Annotated LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000086969.2, 4930443O20Rik ENSMUST00000135659.2, NR_040504.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198220, SRR15198228, SRR2040601, SRR2927112, SRR5643190, SRR5643191, SRR6338004, SRR6904683, SRR6904684, SRR9080662, SRR9080663, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178981, SRR9178983, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990 chr2 85035017 85035018 + Predicted SINE|B4|ID_B1 ENSMUSG00000085135.8, ENSMUSG00000086905.2, Lrrc55os, Gm13716 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 85046105 85046106 + Predicted DNA|hAT-Charlie|Charlie12_Rodent ENSMUSG00000085135.8, Lrrc55os SRR2089609, SRR2089611, SRR2089617, SRR2089641 chr2 85304450 85304451 + Predicted LTR|ERVK|ERVB4_1B-I_MM ENSMUSG00000043226.6, Or5g9 ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF359GCY, ENCFF455DHP, ENCFF609ZVL, ENCFF935LAF, ENCFF970VKB, ENCFF260KJY, ENCFF302TQH, ENCFF442OKF, ENCFF653QJY, ENCFF720MPJ chr2 85850977 85850985 + Annotated LTR|ERV1|MMVL30-int ENSMUSG00000045392.9, Or5m3b ENSMUST00000213774.2, ENSMUST00000214546.2, ENSMUST00000215682.2, NM_146578.3 chr2 90568784 90568785 + Predicted SINE|B4|B4 ENSMUSG00000008200.16, ENSMUSG00000040812.15, Fnbp4, Agbl2 DRR091690, DRR091693, DRR091694, DRR091695, DRR091696, DRR091699, SRR11428469, SRR11428470, SRR13142121, SRR13142122, SRR15198227, SRR6338004, SRR9080662, SRR9080663, SRR9080665, SRR9178976, SRR9178982, SRR9178991 chr2 90748711 90748783 - Predicted SINE|Alu|B1_Mur2 ENSMUSG00000063235.19, Ptpmt1 ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF002FAG, ENCFF022FSI, ENCFF075MGH, ENCFF091WMS, ENCFF119KNP, ENCFF121BYS, ENCFF125HRQ, ENCFF139MHN, ENCFF140VGY, ENCFF184EAT, ENCFF264DCN, ENCFF297CWJ, ENCFF326TQL, ENCFF381JXP, ENCFF404PYQ, ENCFF527VIY, ENCFF552NWL, ENCFF590NVM, ENCFF593RAV, ENCFF625JLB, ENCFF641QXI, ENCFF711WAC, ENCFF796NHQ, ENCFF813GGJ, ENCFF912RLS, ENCFF931PFF, ENCFF934ZAP, ENCFF989HJD, ENCFF027RRZ, ENCFF199IRM, ENCFF269SRJ, ENCFF315OOH, ENCFF364LFJ, ENCFF442FJC, ENCFF446FOZ, ENCFF510TTU, ENCFF532UKS, ENCFF572TOH, ENCFF683CWD, ENCFF697AST, ENCFF766LGO, ENCFF854KNE, ENCFF860XMD, ENCFF862FYE, ENCFF886BRO, ENCFF914YDJ, ENCFF037IZV, ENCFF172DMS, ENCFF178ZXW, ENCFF275HRX, ENCFF279EVY, ENCFF306OWL, ENCFF320CXH, ENCFF454DOT, ENCFF512XKX, ENCFF517EJZ, ENCFF543PXT, ENCFF596INO, ENCFF606XHA, ENCFF611OFH, ENCFF673GRZ, ENCFF689RQK, ENCFF689UNV, ENCFF698WQO, ENCFF705CES, ENCFF749XRU, ENCFF751QWY, ENCFF766UJI, ENCFF809QBQ, ENCFF819JGD, ENCFF860SGX, ENCFF886UAF, ENCFF934VFW, ENCFF953POL, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF342GAL, ENCFF517DCU, ENCFF715CAJ, ENCFF911OIZ chr2 90748917 90748918 - Predicted SINE|B2|B3 ENSMUSG00000063235.19, Ptpmt1 ENCFF297BEX, ENCFF305IXM, ENCFF363CYZ, ENCFF392TDB, ENCFF796NHQ, ENCFF027RRZ, ENCFF446FOZ, ENCFF572TOH, ENCFF052RNG, ENCFF057FFG, ENCFF321NRW, ENCFF667KKO, ENCFF715CAJ, ENCFF906OAF chr2 90750472 90750473 - Predicted LINE|L1|L1MB7 ENSMUSG00000063235.19, Ptpmt1 ENCFF001RTN, ENCFF002EZU, ENCFF002FAI, ENCFF064PBF, ENCFF005GQR, ENCFF156YWS, ENCFF245ZOR, ENCFF247QZW, ENCFF296VFB, ENCFF335ZSA, ENCFF355AMN, ENCFF377UGQ, ENCFF510LAE, ENCFF533DWD, ENCFF595WXV, ENCFF733MXU, ENCFF775SSI, ENCFF854MWX, ENCFF967NOO, ENCFF499CDP, ENCFF510IAG, ENCFF705HQV, ENCFF970VKL, SRR13142122, SRR9080666 chr2 91092710 91092726 + Predicted LTR|Gypsy|MamGypLTR2c ENSMUSG00000027255.15, Arfgap2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091697, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR13142118, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR9080665, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 91611592 91611593 + Predicted SINE|B4|RSINE1 ENSMUSG00000040506.17, Ambra1 DRR091688, DRR091689, DRR091692, DRR091695, DRR091696, SRR10697203, SRR9178983, SRR9178984, SRR9178988, SRR9178992 chr2 9194323 9194362 + Annotated DNA|hAT-Charlie|MER20 ENSMUSG00000085580.2, 1700061F12Rik ENSMUST00000132414.2, NR_038180.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr2 92045794 92045811 + Predicted DNA|hAT-Charlie|MER103C ENSMUSG00000058318.16, Phf21a ENCFF048FGD, ENCFF051JGE, ENCFF143PHU, ENCFF198RBJ, ENCFF005GQR, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF065LOT, ENCFF101BDM, ENCFF143BIC, ENCFF222GPK, ENCFF236TUH, ENCFF247QZW, ENCFF269SRJ, ENCFF296VFB, ENCFF308FEA, ENCFF326UXM, ENCFF355AMN, ENCFF374YTS, ENCFF377UGQ, ENCFF394BDJ, ENCFF444YCN, ENCFF465BBM, ENCFF478KOR, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF521NCL, ENCFF532UKS, ENCFF587VDB, ENCFF595WXV, ENCFF632LPV, ENCFF694NRG, ENCFF728TXU, ENCFF733MXU, ENCFF747XPP, ENCFF756QCA, ENCFF768ZCF, ENCFF804UQS, ENCFF809FPA, ENCFF818BAS, ENCFF854MWX, ENCFF886BRO, ENCFF945ICZ, ENCFF967NOO, ENCFF970VKB, ENCFF975NCY, ENCFF139JTM, ENCFF518TUP, ENCFF075EMK, ENCFF186VNL, ENCFF269AST, ENCFF302TQH, ENCFF499CDP, ENCFF499GDC, ENCFF592WZB, ENCFF705HQV, ENCFF723MAR, ENCFF728WJB, ENCFF803OIY, ENCFF970VKL, SRR15198223, SRR15198226, SRR3178203, SRR3178204, SRR3178205, SRR3178206 chr2 9441903 9441905 + Predicted SINE|B4|B4A ENSMUSG00000079604.10, Gm13219 SRR2089615, SRR2089616, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089636, SRR2089640, SRR2089642, SRR2089645, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr2 96267321 96267323 + Predicted LINE|L1|L1MdTf_III ENSMUSG00000050587.15, Lrrc4c SRR2089611, SRR2089612, SRR2089614, SRR2089619, SRR2089620, SRR2089622, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 96267377 96267378 + Predicted LINE|L1|L1MdTf_III ENSMUSG00000050587.15, Lrrc4c SRR2089611, SRR2089612, SRR2089614, SRR2089619, SRR2089620, SRR2089622, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr2 96913877 96913878 - Predicted LINE|L1|Lx3A ENSMUSG00000091061.2, 4930445B16Rik DRR091689, DRR091698, DRR091699, SRR11428468, SRR11428469, SRR13142120, SRR15198217, SRR15198220, SRR15198221, SRR15198223, SRR15198226, SRR15198227, SRR2927111, SRR2927112, SRR2927113 chr3 100369135 100369136 - Predicted SINE|B4|RSINE1 ENSMUSG00000044468.15, Tent5c SRR2089608, SRR2089614, SRR2089615, SRR2089621, SRR2089632, SRR2089633, SRR2089647 chr3 102041931 102041932 + Annotated SINE|B4|ID_B1 ENSMUSG00000106296.2, 4632404M16Rik ENSMUST00000197326.2 chr3 10273594 10273656 - Annotated LTR|ERVK|RLTR16 ENSMUSG00000062515.4, Fabp4 ENSMUST00000029041.6, ENSMUST00000191757.2 ENCFF001RTD, ENCFF001RTN, ENCFF002FAA, ENCFF002FAC, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048IBL, ENCFF051JGE, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF075MGH, ENCFF084PUC, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF104LLO, ENCFF105KSL, ENCFF108UNS, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF143PHU, ENCFF147GLI, ENCFF159OVE, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF207DLW, ENCFF207OVG, ENCFF210BCB, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF277XPM, ENCFF283XKV, ENCFF287KDR, ENCFF289WHW, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF310HPH, ENCFF313ERY, ENCFF321BMO, ENCFF326TQL, ENCFF331WKS, ENCFF332ZPO, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF358UFZ, ENCFF363CYZ, ENCFF363XWU, ENCFF366BBB, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF432ZLQ, ENCFF445BBH, ENCFF449MIK, ENCFF453XOG, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521UGJ, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF548SLN, ENCFF552NWL, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570GTP, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF608NVM, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF670CXH, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF704GEB, ENCFF710DAI, ENCFF711WAC, ENCFF725RXU, ENCFF743QXJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764ZUI, ENCFF771YNG, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF789LUC, ENCFF793CWJ, ENCFF793IYH, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF841OXD, ENCFF844KCR, ENCFF851ESH, ENCFF852ZDB, ENCFF863RVB, ENCFF865WQE, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF883UYA, ENCFF884DLS, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF906FNQ, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF925ONP, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF946AGD, ENCFF951UXE, ENCFF970JWC, ENCFF979WZO, ENCFF982BLT, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF994BOT, ENCFF996STG, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF151YNV, ENCFF170XMM, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF236TUH, ENCFF245ZOR, ENCFF251WZA, ENCFF261ZZF, ENCFF269WEZ, ENCFF270ERO, ENCFF284AEN, ENCFF304DLW, ENCFF315OOH, ENCFF330FNX, ENCFF364LFJ, ENCFF369YLA, ENCFF377LAC, ENCFF390NKP, ENCFF391UFN, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF467LJD, ENCFF484HRX, ENCFF510LAE, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF567AFB, ENCFF573UIH, ENCFF581KUX, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF642YTY, ENCFF643XFK, ENCFF651SDJ, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF826RUZ, ENCFF829RHM, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF964WZW, ENCFF969WLB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF002ZAX, ENCFF004AEL, ENCFF009AON, ENCFF012HVN, ENCFF015JJB, ENCFF019PVP, ENCFF023TPS, ENCFF027GBM, ENCFF030IFE, ENCFF033DWC, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF041PJP, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF061WTN, ENCFF065ZIE, ENCFF070YMI, ENCFF073RJJ, ENCFF077YZF, ENCFF080BTV, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF095NMU, ENCFF098AYQ, ENCFF103SQR, ENCFF107YGR, ENCFF108JLQ, ENCFF116QKZ, ENCFF120SMK, ENCFF126WDH, ENCFF127DCC, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF136DUH, ENCFF136TYP, ENCFF148BPZ, ENCFF149BQJ, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF197JAP, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF219PCN, ENCFF222MKT, ENCFF229TCX, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF255ESE, ENCFF256UWN, ENCFF258WLS, ENCFF264PYB, ENCFF267KZS, ENCFF268YSJ, ENCFF268ZHE, ENCFF272VMY, ENCFF273CBP, ENCFF275HRX, ENCFF276OPJ, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF292KWK, ENCFF296UDD, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF306OWL, ENCFF310HAL, ENCFF313IFI, ENCFF315OFF, ENCFF316EEH, ENCFF319YFJ, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF332RWQ, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346NGU, ENCFF346UBA, ENCFF348RRM, ENCFF350KYC, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF369VAI, ENCFF371ZDG, ENCFF376PQU, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF399TOF, ENCFF399YLV, ENCFF406LFV, ENCFF408FFP, ENCFF411KCB, ENCFF411YXB, ENCFF414IHO, ENCFF417INY, ENCFF417OEG, ENCFF421DHQ, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF427YDU, ENCFF429TQT, ENCFF430ERW, ENCFF450CUC, ENCFF453MPR, ENCFF456GLS, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF460VXC, ENCFF464KYQ, ENCFF468RDR, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF522KWW, ENCFF530DUT, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF561CZI, ENCFF563FUC, ENCFF565DII, ENCFF566HCI, ENCFF569ELL, ENCFF572JDP, ENCFF572SQL, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF580KHN, ENCFF581RIR, ENCFF584OOK, ENCFF584ZUK, ENCFF587HBC, ENCFF588JAU, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF598BFX, ENCFF598LJF, ENCFF598WAL, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF612KDP, ENCFF614WCH, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF641CYW, ENCFF644GYU, ENCFF647KBV, ENCFF655CUI, ENCFF656DRS, ENCFF658NHH, ENCFF667RGF, ENCFF668SQN, ENCFF672WYO, ENCFF673GRZ, ENCFF673ZDG, ENCFF680WIN, ENCFF681EEO, ENCFF687GPO, ENCFF687STH, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF695XIY, ENCFF698XCB, ENCFF699SBZ, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF754VQW, ENCFF757JMT, ENCFF758BKM, ENCFF758JNE, ENCFF759HJA, ENCFF759WDO, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF779MMO, ENCFF780UQU, ENCFF781MKK, ENCFF790WIY, ENCFF791ZDR, ENCFF794GVC, ENCFF796TQV, ENCFF798TFC, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF817HZQ, ENCFF819JGD, ENCFF820JMO, ENCFF821HAZ, ENCFF829HAB, ENCFF830CBI, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF840EFC, ENCFF847HFJ, ENCFF848LWJ, ENCFF848UMJ, ENCFF851JLX, ENCFF855UFX, ENCFF860SGX, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF883APB, ENCFF885ZAO, ENCFF886UAF, ENCFF896XAZ, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF903KDM, ENCFF916JWW, ENCFF921PGH, ENCFF926FRX, ENCFF930JCE, ENCFF934QGX, ENCFF934VFW, ENCFF938XTE, ENCFF939UBM, ENCFF944RHJ, ENCFF948BDY, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF952EQQ, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF974KKD, ENCFF974XWJ, ENCFF976SMI, ENCFF983GRF, ENCFF994PPZ, ENCFF996AOW, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF160TQC, ENCFF178HDG, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF254YNR, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF517DCU, ENCFF555BQD, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF667KKO, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF827NYZ, ENCFF888IIL, ENCFF906OAF, DRR091690, DRR091691, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR13142118, SRR13142120, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080666 chr3 10407896 10407897 + Annotated LTR|ERVK|RLTR20D ENSMUSG00000121077.1, ENSMUSG00000121077 ENSMUST00000247080.1 DRR091698, DRR091699, SRR15198224, SRR2040601 chr3 104770063 104770064 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000045576.17, St7l ENCFF027IIP, ENCFF130KZZ, ENCFF221JIC, ENCFF923VUD, ENCFF118YHP chr3 104775007 104775040 + Predicted DNA|TcMar-Tigger|Tigger5b_Glire ENSMUSG00000045576.17, St7l ENCFF524PAV, ENCFF685GDB, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697198, SRR13142118, SRR13142119, SRR15198217, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198227, SRR2040601, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178983, SRR9178986, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 108611796 108611835 - Predicted LINE|L1|Lx8 ENSMUSG00000027883.16, Gpsm2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 108644536 108644537 + Predicted SINE|B2|B3 ENSMUSG00000049565.17, Aknad1 SRR2089606, SRR2089607, SRR2089612, SRR2089618, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 109042016 109042051 + Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000040322.11, Slc25a24 DRR091688, DRR091689, DRR091690, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697201, SRR10697203, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198225, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080665, SRR9178982, SRR9178984, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 115435157 115435238 - Annotated LINE|L1|Lx8 ENSMUSG00000120078.1, ENSMUSG00000120078 ENSMUST00000246961.1, ENSMUST00000241256.1 ENCFF001RTD, ENCFF001RTN, ENCFF067UCQ, ENCFF134HVE, ENCFF170XMM, ENCFF236TUH, ENCFF270ERO, ENCFF304DLW, ENCFF390NKP, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF657UWH, ENCFF686KMX, ENCFF756QCA, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF962FIU, ENCFF964WZW, ENCFF160TQC, ENCFF199IWW, ENCFF319SDE, ENCFF344OJQ, ENCFF423TSB, ENCFF446LMP, ENCFF517DCU, ENCFF641WPY, ENCFF723MAR chr3 116376973 116376974 - Predicted SINE|Alu|PB1D10 ENSMUSG00000033439.13, Trmt13 ENCFF075MGH, ENCFF136POG, ENCFF313ERY, ENCFF330IYN, ENCFF439OFV, ENCFF647ICR, ENCFF942WIP, ENCFF219PCN, ENCFF598BFX, ENCFF655CUI, ENCFF754VQW, ENCFF791ZDR, ENCFF997QQG chr3 116457381 116457382 + Annotated LTR|ERVL-MaLR|MLT1F1 ENSMUSG00000106125.2, 4930512P04Rik ENSMUST00000197000.2 ENCFF228CMT chr3 117028234 117028273 + Predicted Retroposon|L1-dep|RMER1A ENSMUSG00000106342.2, Gm42891 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178991, SRR9178992 chr3 121437015 121437016 - Annotated SINE|MIR|MIRc ENSMUSG00000044522.9, A730020M07Rik ENSMUST00000198402.2 chr3 121503894 121503895 - Annotated LTR|ERVL|LTR33A ENSMUSG00000106036.2, Gm43608 ENSMUST00000197703.2 chr3 121925651 121925652 + Annotated SINE|Alu|PB1D7 ENSMUSG00000028125.15, Abca4 ENSMUST00000141135.5 ENCFF002FAA, ENCFF002FAC chr3 122427716 122427717 - Predicted SINE|B4|ID_B1 ENSMUSG00000106562.2, Gm5981 SRR2089611, SRR2089629, SRR2089634 chr3 122433788 122433789 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000106562.2, Gm5981 SRR2089603, SRR2089607, SRR2089610, SRR2089613, SRR2089618, SRR2089622, SRR2089623, SRR2089630, SRR2089631, SRR2089633 chr3 122595628 122595697 - Annotated LINE|L2|L2b ENSMUSG00000106583.2, 4930447N08Rik ENSMUST00000200530.2, ENSMUST00000198879.2, NR_045168.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 123058445 123058472 + Annotated LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000120630.1, ENSMUSG00000120630 ENSMUST00000244708.1 ENCFF001NDA, ENCFF002EZU, ENCFF002EZW, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF521IDK, ENCFF696TCH, ENCFF065TCZ, ENCFF236TUH, ENCFF270ERO, ENCFF335ZSA, ENCFF348FTH, ENCFF377UGQ, ENCFF390NKP, ENCFF444YCN, ENCFF467LJD, ENCFF500QZK, ENCFF533DWD, ENCFF592GVA, ENCFF604SXL, ENCFF756QCA, ENCFF804UQS, ENCFF808PVJ, ENCFF855FCX, ENCFF868WEJ, ENCFF939IUH, ENCFF962FIU, ENCFF964WZW, ENCFF967NOO, ENCFF119IHT, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF446LMP, ENCFF510AYI, ENCFF517DCU, ENCFF803OIY, ENCFF911OIZ, SRR15198217, SRR15198228 chr3 125474636 125474647 + Annotated LTR|ERV1|RMER2 ENSMUSG00000027971.17, Ndst4 ENSMUST00000174648.6, ENSMUST00000172632.2 SRR13142122, SRR5643191, SRR6904683, SRR6904685 chr3 125900347 125900367 + Predicted SINE|B4|B4A ENSMUSG00000106503.2, Gm42827 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697203, SRR11428469, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2040601, SRR2927113, SRR9080662, SRR9178977, SRR9178980, SRR9178982, SRR9178985, SRR9178986, SRR9178989, SRR9178990, SRR9178992 chr3 126574010 126574011 + Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000053819.17, Camk2d ENCFF002FAA, ENCFF002FAC, ENCFF212JFB, ENCFF426QFT, ENCFF437AJW, ENCFF982BLT, ENCFF017LOD, ENCFF060JCS, ENCFF065TCZ, ENCFF067UCQ, ENCFF115LWP, ENCFF148XRK, ENCFF199ZDO, ENCFF236TUH, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF271OHB, ENCFF274ESJ, ENCFF296VFB, ENCFF345BBC, ENCFF348FTH, ENCFF369YLA, ENCFF377UGQ, ENCFF385UBP, ENCFF390NKP, ENCFF444YCN, ENCFF454ZUS, ENCFF465BBM, ENCFF510LAE, ENCFF590LNP, ENCFF592GVA, ENCFF642YTY, ENCFF657UWH, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF704WWK, ENCFF721ASG, ENCFF725ATS, ENCFF747XPP, ENCFF756QCA, ENCFF775SSI, ENCFF808PVJ, ENCFF818BAS, ENCFF854KNE, ENCFF855FCX, ENCFF868WEJ, ENCFF886BRO, ENCFF923VUD, ENCFF924LPZ, ENCFF935LAF, ENCFF939IUH, ENCFF962OCF, ENCFF967NOO, ENCFF006JHA, ENCFF229TCX, ENCFF319YFJ, ENCFF479WHZ, ENCFF565DII, ENCFF706BUS, ENCFF757JMT, ENCFF796TQV, ENCFF829HAB, ENCFF832FTK, ENCFF008XVO, ENCFF075EMK, ENCFF160TQC, ENCFF302TQH, ENCFF344OJQ, ENCFF361MLD, ENCFF423TSB, ENCFF446LMP, ENCFF499GDC, ENCFF510AYI, ENCFF667KKO, ENCFF671TUD, ENCFF716YKR, ENCFF733LFV, ENCFF847LGC, ENCFF888IIL, SRR10697196, SRR15198217 chr3 126857380 126857390 - Predicted LTR|ERVK|MLTR11B ENSMUSG00000032826.20, Ank2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 127399453 127399454 + Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000051278.13, Zgrf1 DRR091689, DRR091690, DRR091691, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697200, SRR13142118, SRR13142119, SRR15198217, SRR15198222, SRR15198224, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178978, SRR9178986, SRR9178990 chr3 127709817 127709822 + Annotated LTR|ERVL-MaLR|ORR1A1 ENSMUSG00000104763.3, 9830132P13Rik ENSMUST00000244422.1, ENSMUST00000198240.2, NR_040552.1 ENCFF181RDS, ENCFF198RBJ, ENCFF793IYH chr3 129475194 129475195 - Annotated SINE|B2|B3 ENSMUSG00000028017.8, Egf ENSMUST00000197250.2 chr3 129551569 129551570 + Predicted LTR|ERVK|ERVB3_1-LTR_MM ENSMUSG00000105960.2, 6330410L21Rik ENCFF001NDA, ENCFF001NDD, ENCFF002EZU, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr3 131196239 131196240 - Annotated LTR|ERVK|RMER6-int ENSMUSG00000050931.8, Sgms2 ENSMUST00000197057.2 ENCFF001RTD, ENCFF001RTN, ENCFF002FAI, ENCFF344ILW, ENCFF993QUE chr3 131465551 131465567 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000105331.2, Gm29865 ENSMUST00000197726.2 DRR091689, SRR10697200, SRR10697203, SRR13142118, SRR13142119, SRR15198218, SRR15198219, SRR15198221, SRR15198225, SRR2040601, SRR2927113, SRR9178981, SRR9178982, SRR9178985, SRR9178989 chr3 133369151 133369161 - Annotated LTR|ERVK|RLTR12H ENSMUSG00000105952.2, Gm40153 ENSMUST00000197904.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990 chr3 134129374 134129396 - Annotated LINE|L1|Lx8 ENSMUSG00000105765.2, 4930539C22Rik ENSMUST00000198231.2, NR_040600.1 DRR091689, DRR091690, DRR091691, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697199, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198221, SRR15198222, SRR15198228, SRR2040601, SRR2927113, SRR9178976 chr3 134175663 134175664 - Predicted LINE|L1|Lx8 ENSMUSG00000097031.3, Gm26820 SRR2089604, SRR2089606, SRR2089609, SRR2089610, SRR2089613, SRR2089617, SRR2089618, SRR2089619, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 134175761 134175769 - Predicted LINE|L1|Lx8 ENSMUSG00000097031.3, Gm26820 SRR2089604, SRR2089606, SRR2089609, SRR2089610, SRR2089613, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 134178075 134178076 - Predicted LINE|L1|L1M3 ENSMUSG00000097031.3, Gm26820 SRR2089620, SRR2089638, SRR2089641, SRR2089644, SRR2089646 chr3 134202874 134202875 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000097031.3, Gm26820 SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089614, SRR2089622, SRR2089630, SRR2089631, SRR2089634, SRR2089637, SRR2089638, SRR2089639, SRR2089645, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 134209829 134209830 - Predicted Retroposon|L1-dep|RMER1B ENSMUSG00000097031.3, Gm26820 SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089630, SRR2089631, SRR2089632, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089649, SRR2089651 chr3 135142993 135142994 + Predicted DNA|hAT-Charlie|MER5A1 ENSMUSG00000078578.10, Ube2d3 ENCFF075MGH, ENCFF917RNE, ENCFF108JLQ, ENCFF148BPZ, ENCFF254VIN, ENCFF271RFU, ENCFF297PPT, ENCFF310WDZ, ENCFF376PQU, ENCFF399YLV, ENCFF485GFE, ENCFF601JTS, ENCFF741PLM, ENCFF806MTS, ENCFF906CJJ chr3 136149557 136149558 - Predicted LTR|ERVL|MT2_Mm ENSMUSG00000099508.2, 1700030L20Rik SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697202, SRR3178205, SRR5643199, SRR6904684, SRR9178978, SRR9178979, SRR9178983, SRR9178985, SRR9178987 chr3 137583378 137583379 - Predicted LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000106629.2, Gm40155 SRR3178204, SRR3178206, SRR5643199, SRR6904684, SRR6904685 chr3 137583864 137583895 - Annotated LINE|L1|HAL1M8 ENSMUSG00000106629.2, Gm40155 ENSMUST00000198291.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 137706631 137706644 + Annotated SINE|5S-Deu-L2|AmnSINE1 ENSMUSG00000105296.3, Gm19708 ENSMUST00000199386.3, ENSMUST00000244281.1, ENSMUST00000245446.1, ENSMUST00000241027.1, ENSMUST00000241169.1 ENCFF437AJW chr3 138047733 138047734 + Annotated LTR|ERVL|RMER15 ENSMUSG00000074206.8, Adh6b ENSMUST00000199718.2 chr3 139397368 139397388 + Predicted LINE|L1|Lx3A ENSMUSG00000047940.14, Stpg2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR6904683, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178979, SRR9178982, SRR9178986, SRR9178987, SRR9178990 chr3 142235748 142235828 + Predicted LINE|L1|L1MA6 ENSMUSG00000040253.16, Gbp7 ENCFF051JGE, ENCFF074HTO, ENCFF104LLO, ENCFF115KZV, ENCFF116MYR, ENCFF163LPQ, ENCFF274WSX, ENCFF277XPM, ENCFF313ERY, ENCFF344ILW, ENCFF376MQF, ENCFF400XLQ, ENCFF439OFV, ENCFF470MXU, ENCFF514BEA, ENCFF533NLR, ENCFF548SLN, ENCFF564OKH, ENCFF623BKO, ENCFF641QXI, ENCFF647ICR, ENCFF707QJV, ENCFF743RQJ, ENCFF771LLL, ENCFF783MLO, ENCFF813GGJ, ENCFF841OXD, ENCFF851ESH, ENCFF868XLZ, ENCFF941QCZ, ENCFF946AGD, ENCFF979WZO, ENCFF994BOT, ENCFF251WZA, ENCFF754TOT, ENCFF775SSI, ENCFF912MUD, ENCFF952BCB, ENCFF015JJB, ENCFF027GBM, ENCFF041PJP, ENCFF066UDR, ENCFF068CQU, ENCFF073RJJ, ENCFF080BTV, ENCFF082OML, ENCFF087XKQ, ENCFF094RHV, ENCFF103SQR, ENCFF121IDD, ENCFF162FTA, ENCFF167EHX, ENCFF187BHR, ENCFF194DAO, ENCFF199AAD, ENCFF205CDI, ENCFF243LBQ, ENCFF255ESE, ENCFF296UDD, ENCFF302MXO, ENCFF306FQJ, ENCFF332RWQ, ENCFF394AUR, ENCFF460FON, ENCFF483SQS, ENCFF504PGI, ENCFF512LAN, ENCFF566HCI, ENCFF581ZWM, ENCFF601JTS, ENCFF641CYW, ENCFF644EGG, ENCFF655KBW, ENCFF668SQN, ENCFF672WYO, ENCFF696QTS, ENCFF766UJI, ENCFF782CNW, ENCFF790WIY, ENCFF796TQV, ENCFF812LAI, ENCFF863LMG, ENCFF872SFD, ENCFF906CJJ, ENCFF908MGO, ENCFF951GZB, ENCFF970PLY, ENCFF970WCD, ENCFF997QQG, ENCFF366CUG, ENCFF555BQD, SRR15198218 chr3 142418574 142418579 + Annotated LTR|ERVK|RLTR44B ENSMUSG00000120786.1, ENSMUSG00000120786 ENSMUST00000245792.1 ENCFF001RTD, ENCFF001RTN, ENCFF089PFT, ENCFF223BXU, ENCFF446FOZ, ENCFF608LAL, ENCFF683CWD, ENCFF737OUQ, ENCFF838YLT, ENCFF306ADU, SRR10697197, SRR10697199, SRR10697200, SRR10697203, SRR15198220, SRR15198222, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080665, SRR9080666, SRR9178982, SRR9178991 chr3 143861658 143861659 + Annotated LTR|ERVL|LTR50 ENSMUSG00000120269.1, ENSMUSG00000120269 ENSMUST00000242191.1 chr3 144677885 144677886 + Annotated LTR|ERVK|MLTR31E_MM ENSMUSG00000106361.2, Gm35066 ENSMUST00000198898.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, SRR15198221, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr3 144829472 144829473 + Predicted SINE|B2|B3A ENSMUSG00000028256.17, Odf2l ENCFF002DMZ, ENCFF002ERU, ENCFF107XGE, ENCFF192NVI, ENCFF284OMO, ENCFF376MQF, ENCFF502ANK, ENCFF535YBP, ENCFF605IFN, ENCFF723QIC, ENCFF844QDN, ENCFF884DLS, ENCFF979WZO, ENCFF014CMK, ENCFF039PJR, ENCFF210BVU, ENCFF221ZQB, ENCFF301VMF, ENCFF504PGI, ENCFF820JMO, ENCFF859MTL, ENCFF869MFM, ENCFF964HGL chr3 146321350 146321353 - Annotated LTR|ERVL|MT2A ENSMUSG00000028185.13, Dnase2b ENSMUST00000200633.2, NM_019957.4 chr3 146357471 146357472 - Predicted SINE|B2|B3 ENSMUSG00000048652.13, Samd13 DRR091690, SRR15198217, SRR15198224, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178986, SRR9178992 chr3 14873424 14873436 - Annotated LTR|ERVL|MER74C ENSMUSG00000027556.16, Car1 ENSMUST00000181860.8, ENSMUST00000144327.3, NM_009799.4 ENCFF001NDZ, ENCFF002DMZ, ENCFF002DNB, ENCFF002ERU, ENCFF002ERW, ENCFF048FGD, ENCFF089WMB, ENCFF102BWR, ENCFF106GQS, ENCFF181RDS, ENCFF198RBJ, ENCFF327MSM, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF452AXW, ENCFF489IGD, ENCFF502ANK, ENCFF575RUC, ENCFF793IYH, ENCFF874ELO, ENCFF888LGA, ENCFF993QUE, ENCFF195JLT, ENCFF234LUQ, ENCFF455DHP, ENCFF383AJS chr3 15034671 15034673 + Predicted LINE|L1|L1MB1 ENSMUSG00000098008.2, A930001A20Rik SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089621, SRR2089622, SRR2089630, SRR2089633, SRR2089634, SRR2089651 chr3 151789618 151789619 + Predicted LTR|ERVK|RLTR31D_MM ENSMUSG00000105698.2, Gm31881 DRR091691, DRR091692, DRR091693, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198225, SRR15198228, SRR2040601, SRR2927113, SRR9178986, SRR9178987 chr3 151812295 151812296 + Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000105698.2, Gm31881 ENSMUST00000198961.2 chr3 151881983 151882023 - Predicted LINE|L1|Lx5 ENSMUSG00000039131.16, Gipc2 DRR091688, DRR091689, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9080665, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178988 chr3 152408334 152408352 + Annotated LTR|ERVK|RLTR20C1_MM ENSMUSG00000119993.1, ENSMUSG00000119993 ENSMUST00000243957.1, ENSMUST00000243740.1, ENSMUST00000241385.1, ENSMUST00000244957.1, ENSMUST00000245417.1 ENCFF001NCR, ENCFF001NDD, DRR091689, DRR091690, DRR091695, DRR091697, DRR091699, SRR10697201, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178989, SRR9178992 chr3 152888422 152888452 - Annotated LINE|L1|L1MC1 ENSMUSG00000105337.5, 1700094M23Rik ENSMUST00000198047.5 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR9080662, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989 chr3 153591866 153591867 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000038997.5, Asb17 ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr3 154416655 154416656 - Predicted LTR|LTR|MamRep605 ENSMUSG00000092522.2, Gm20389 SRR2040601, SRR2927111, SRR2927112, SRR9080663, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178984, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr3 154416900 154416901 - Predicted LTR|LTR|MamRep605 ENSMUSG00000092522.2, Gm20389 DRR091691, DRR091694, DRR091696, SRR10697195, SRR10697196, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142122, SRR15198217, SRR15198218, SRR15198224, SRR15198227, SRR2040601, SRR2927111, SRR2927113, SRR3178204, SRR3178206, SRR5643190, SRR5643191, SRR5643199, SRR6338004, SRR6904683, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr3 154416979 154416984 - Annotated LTR|LTR|MamRep605 ENSMUSG00000092522.2, Gm20389 ENSMUST00000174217.2, NR_166197.1 DRR091688, DRR091691, DRR091694, DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142122, SRR15198217, SRR15198218, SRR15198224, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178206, SRR5643190, SRR5643191, SRR5643199, SRR6338004, SRR6904683, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 156695866 156695867 + Predicted LINE|L1|L1MdFanc_I ENSMUSG00000040037.14, Negr1 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr3 158809175 158809176 + Predicted LINE|L1|Lx ENSMUSG00000106053.2, Gm20752 SRR2089620, SRR2089632, SRR2089634, SRR2089637 chr3 18231788 18231789 - Annotated LTR|ERV1|RMER5 ENSMUSG00000119287.1, Gm23686 ENSMUST00001239516.1 chr3 18378325 18378326 - Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000102886.2, Gm30667 SRR2089636, SRR2089637, SRR2089640, SRR2089647, SRR2089648, SRR2089650, SRR2089651 chr3 21854934 21854937 - Annotated LTR|ERVK|MLTR31FA_MM ENSMUSG00000103441.2, 7530428D23Rik ENSMUST00000191725.2, NR_166473.1 ENCFF516BTG, ENCFF626KIV chr3 23889113 23889114 + Predicted SINE|Alu|B1_Mm ENSMUSG00000102203.2, 4930412E21Rik SRR2089620, SRR2089631, SRR2089632 chr3 23993640 23993641 - Annotated LTR|ERVK|RMER17D ENSMUSG00000102758.4, Naaladl2 ENSMUST00000192246.4 DRR091688, DRR091689, DRR091691, DRR091693, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR15198223, SRR15198224, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr3 25022554 25022555 - Predicted LINE|L1|L1MdTf_II ENSMUSG00000102758.4, Naaladl2 ENCFF521UGJ, ENCFF163BDT, ENCFF486BJT chr3 28004151 28004153 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000027695.17, Pld1 ENSMUST00000127139.8, ENSMUST00000125338.8 chr3 30846945 30847302 + Annotated DNA|hAT-Charlie|MER5A ENSMUSG00000027706.9, Sec62 ENSMUST00000029256.9, NM_001357528.1, NM_027016.2 ENCFF001RTD, ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAI, ENCFF022FSI, ENCFF027IIP, ENCFF048IBL, ENCFF051JSS, ENCFF059IQN, ENCFF084PUC, ENCFF090USB, ENCFF094CCP, ENCFF104LLO, ENCFF106GQS, ENCFF117BGT, ENCFF159OVE, ENCFF198RBJ, ENCFF207OVG, ENCFF210BCB, ENCFF274WSX, ENCFF305IXM, ENCFF308LTO, ENCFF310HPH, ENCFF363CYZ, ENCFF514JOV, ENCFF521IDK, ENCFF534DID, ENCFF564OKH, ENCFF595GFM, ENCFF621PKT, ENCFF623BKO, ENCFF670CXH, ENCFF683RFI, ENCFF705JRV, ENCFF725RXU, ENCFF793IYH, ENCFF796NHQ, ENCFF886XAI, ENCFF917RNE, ENCFF942WIP, ENCFF985BLV, ENCFF991TPB, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF234LUQ, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF374YTS, ENCFF377UGQ, ENCFF390NKP, ENCFF391UFN, ENCFF408NBX, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF712DGP, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF768ZCF, ENCFF775SSI, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF924LPZ, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF975NCY, ENCFF978EQI, ENCFF027GBM, ENCFF037GFB, ENCFF049SEE, ENCFF052RNG, ENCFF057FFG, ENCFF070YMI, ENCFF080REY, ENCFF082BJV, ENCFF116DGU, ENCFF155GUC, ENCFF156XMZ, ENCFF177SGB, ENCFF205CDI, ENCFF208BJY, ENCFF237JCE, ENCFF243TPB, ENCFF255ESE, ENCFF275TCB, ENCFF359DNK, ENCFF371ZDG, ENCFF397MUI, ENCFF408FFP, ENCFF426FAF, ENCFF430ERW, ENCFF450CUC, ENCFF490ULA, ENCFF517EJZ, ENCFF566HCI, ENCFF569ELL, ENCFF578PSU, ENCFF606XHA, ENCFF609WDV, ENCFF620FXM, ENCFF627XGF, ENCFF633QXI, ENCFF644EGG, ENCFF651HEM, ENCFF694EPZ, ENCFF698WQO, ENCFF705CES, ENCFF716NXU, ENCFF723QWN, ENCFF727JTZ, ENCFF819JGD, ENCFF830CBI, ENCFF872SFD, ENCFF953FGT, ENCFF994PPZ, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF186VNL, ENCFF199IWW, ENCFF242SVY, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF641WPY, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF720MPJ, ENCFF723MAR, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, SRR13142120, SRR13142121, SRR13142122, SRR6904685, SRR9080666, SRR9178976 chr3 31312542 31312543 - Annotated LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000069072.10, Slc7a14 ENSMUST00000108245.2 chr3 34764373 34764375 - Predicted SINE|B4|ID_B1 ENSMUSG00000105153.5, Gm3143 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR15198217, SRR15198223, SRR15198224, SRR2040601, SRR2927113, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr3 35330273 35330302 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000105651.2, 1700017M07Rik ENSMUST00000198307.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 35691228 35691229 - Predicted LTR|ERVK|RLTR9E ENSMUSG00000105662.5, Gm6639 ENCFF089PFT, ENCFF521IDK, SRR10697200, SRR13142118, SRR13142119, SRR2927113 chr3 37656496 37656544 - Predicted DNA|hAT-Tip100|FordPrefect ENSMUSG00000081093.2, Gm12565 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR11428467, SRR11428468, SRR11428470, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080663, SRR9178979, SRR9178982, SRR9178986, SRR9178990 chr3 37668055 37668081 + Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000085677.8, 4930594O21Rik ENSMUST00000144981.8, ENSMUST00000129750.2, NR_130163.1, NR_130161.1 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091697, SRR10697196, SRR10697199, SRR10697200, SRR10697202, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198219, SRR15198221, SRR15198223, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9178982, SRR9178991 chr3 37683943 37683944 + Predicted DNA|TcMar-Tc2|Kanga1b ENSMUSG00000037211.13, Spry1 SRR2089604, SRR2089606, SRR2089607, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 41318804 41318831 + Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000105297.2, 1700052H01Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697201, SRR10697202, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080662, SRR9178976, SRR9178979 chr3 41447617 41447635 - Annotated LTR|ERVK|RLTR20C ENSMUSG00000097639.4, Platr4 ENSMUST00000241199.1, ENSMUST00000243558.1, ENSMUST00000199155.3, ENSMUST00000181833.2, NR_040385.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTN, ENCFF089PFT, ENCFF489IGD, ENCFF521IDK, ENCFF696TCH, ENCFF874ELO chr3 47037777 47037778 - Predicted LINE|L1|L1Lx_III ENSMUSG00000097985.2, Gm5274 SRR2089605, SRR2089608, SRR2089614, SRR2089622, SRR2089629, SRR2089630, SRR2089632, SRR2089634, SRR2089635, SRR2089638, SRR2089640, SRR2089641, SRR2089642, SRR2089644, SRR2089647 chr3 47042634 47042673 - Predicted LTR|ERVK|RLTR20B5_MM ENSMUSG00000097985.2, Gm5274 SRR2089604, SRR2089605, SRR2089607, SRR2089608, SRR2089610, SRR2089612, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089635, SRR2089636, SRR2089637, SRR2089638 chr3 49016799 49016833 + Annotated LTR|ERVK|RLTR20C2_MM ENSMUSG00000102263.2, Gm31415 ENSMUST00000194963.2 ENCFF001NDA, ENCFF001NDD, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr3 49016901 49016902 + Predicted LTR|ERVK|RLTR20C2_MM ENSMUSG00000102263.2, Gm31415 ENCFF001NDA, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080663, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178991 chr3 49962633 49962634 + Predicted LINE|L1|Lx4A ENSMUSG00000102892.2, Gm37854 SRR2089604, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 50637849 50637850 - Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000104281.2, Gm37461 ENSMUST00000193929.2 chr3 51131306 51131320 + Predicted LTR|ERV1|MLTR14 ENSMUSG00000023087.16, Noct ENCFF027IIP, ENCFF051JSS, ENCFF074HTO, ENCFF094CCP, ENCFF104LLO, ENCFF142CUS, ENCFF261OTH, ENCFF297BEX, ENCFF310HPH, ENCFF345OIF, ENCFF351JWR, ENCFF470MXU, ENCFF495YGN, ENCFF548SLN, ENCFF564OKH, ENCFF595GFM, ENCFF623BKO, ENCFF683RFI, ENCFF813GGJ, ENCFF841OXD, ENCFF851ESH, ENCFF878SQO, ENCFF914BRK, ENCFF934ZAP, ENCFF027GBM, ENCFF077YZF, ENCFF163DKN, ENCFF187BHR, ENCFF197TJB, ENCFF243LBQ, ENCFF267KZS, ENCFF315OFF, ENCFF338DAA, ENCFF341YZB, ENCFF348RRM, ENCFF369VAI, ENCFF380BYT, ENCFF397MUI, ENCFF426ETE, ENCFF426FAF, ENCFF541HSQ, ENCFF751QWY, ENCFF766UJI, ENCFF769FVU, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF872SFD, ENCFF900AIQ, ENCFF958BIE, ENCFF970WCD, ENCFF994PPZ chr3 51151007 51151064 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000023087.16, Noct ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF027IIP, ENCFF051JSS, ENCFF269UZL, ENCFF295SYY, ENCFF443PSO, ENCFF495SQR, ENCFF521UGJ, ENCFF570GTP, ENCFF595GFM, ENCFF623BKO, ENCFF683RFI, ENCFF914BRK, ENCFF925ONP, ENCFF933UPG, ENCFF962LFN, ENCFF023TPS, ENCFF066MTU, ENCFF066UDR, ENCFF088PZI, ENCFF095NMU, ENCFF106GHS, ENCFF134PXJ, ENCFF140WZW, ENCFF149JXW, ENCFF163BDT, ENCFF167EHX, ENCFF169JOQ, ENCFF174EGP, ENCFF179HJV, ENCFF184ALY, ENCFF194DAO, ENCFF201IQS, ENCFF203EWG, ENCFF207RVA, ENCFF208BJY, ENCFF229CPV, ENCFF237HDL, ENCFF237JCE, ENCFF272VMY, ENCFF273CBP, ENCFF296UDD, ENCFF303BIV, ENCFF310BWG, ENCFF324ITL, ENCFF346UBA, ENCFF363PDR, ENCFF371ZDG, ENCFF380BYT, ENCFF382VCK, ENCFF403RPK, ENCFF409ABB, ENCFF414IHO, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF426FAF, ENCFF426ZCK, ENCFF429ZEH, ENCFF440IAL, ENCFF443URE, ENCFF456GLS, ENCFF497NJW, ENCFF541HSQ, ENCFF548HOL, ENCFF552LXG, ENCFF587HBC, ENCFF641CYW, ENCFF647KBV, ENCFF667RGF, ENCFF668SQN, ENCFF681EEO, ENCFF705CES, ENCFF712EKU, ENCFF717GIT, ENCFF740TFX, ENCFF756QJD, ENCFF757JMT, ENCFF791AUB, ENCFF794GVC, ENCFF796TQV, ENCFF821HAZ, ENCFF834TET, ENCFF848UMJ, ENCFF859MTL, ENCFF861RRQ, ENCFF866IHG, ENCFF867FTP, ENCFF894COY, ENCFF900LFN, ENCFF904KCQ, ENCFF927LFD, ENCFF948YKH, ENCFF949QCF, ENCFF970PLY, ENCFF970WCD, ENCFF971DTR, ENCFF985NHB, ENCFF986DZE, ENCFF998BIQ chr3 51152230 51152231 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000023087.16, Noct ENCFF083CUR, ENCFF265LKR, ENCFF273TLO, ENCFF304MIZ, ENCFF321BMO, ENCFF422ATU, ENCFF489VZI, ENCFF495SQR, ENCFF552DRF, ENCFF643VPC, ENCFF707QJV, ENCFF710DAI, ENCFF789LUC, ENCFF792XYG, ENCFF812CUD, ENCFF896MQK, ENCFF970JWC, ENCFF027QGO, ENCFF065UBR, ENCFF078CCF, ENCFF111MWQ, ENCFF118PQI, ENCFF121IDD, ENCFF137OYQ, ENCFF142PTA, ENCFF184ALY, ENCFF208BJY, ENCFF220GKL, ENCFF237JCE, ENCFF239RQP, ENCFF247VEN, ENCFF248XZC, ENCFF255XDN, ENCFF256UWN, ENCFF260BJB, ENCFF268YSJ, ENCFF271RFU, ENCFF272WGJ, ENCFF301VMF, ENCFF310HAL, ENCFF328TJH, ENCFF331YYO, ENCFF363PDR, ENCFF366CSN, ENCFF397ZQU, ENCFF403RPK, ENCFF417INY, ENCFF438ROC, ENCFF439BEV, ENCFF450CUC, ENCFF456GLS, ENCFF460VXC, ENCFF462HZM, ENCFF483SQS, ENCFF512LAN, ENCFF515GXB, ENCFF536ZFC, ENCFF565FFU, ENCFF572JDP, ENCFF581ZWM, ENCFF585CYT, ENCFF588JAU, ENCFF591WVP, ENCFF601JTS, ENCFF657NUT, ENCFF673ZDG, ENCFF696QTS, ENCFF698XCB, ENCFF699SBZ, ENCFF757JMT, ENCFF798TFC, ENCFF803ZUN, ENCFF814PHK, ENCFF816CPX, ENCFF843WRN, ENCFF853PNO, ENCFF881YOK, ENCFF927LFD, ENCFF931NMQ, ENCFF944RHJ, ENCFF964HGL, ENCFF976SMI, ENCFF984QED, ENCFF985NHB, ENCFF986DZE chr3 51152291 51152333 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000023087.16, Noct ENCFF083CUR, ENCFF212JFB, ENCFF262WAE, ENCFF265LKR, ENCFF273TLO, ENCFF295SYY, ENCFF304MIZ, ENCFF321BMO, ENCFF400XLQ, ENCFF422ATU, ENCFF489VZI, ENCFF495SQR, ENCFF535YBP, ENCFF552DRF, ENCFF643VPC, ENCFF707QJV, ENCFF710DAI, ENCFF789LUC, ENCFF792XYG, ENCFF812CUD, ENCFF844KCR, ENCFF896MQK, ENCFF960LQP, ENCFF970JWC, ENCFF982BLT, ENCFF027QGO, ENCFF065UBR, ENCFF078CCF, ENCFF098TCZ, ENCFF111MWQ, ENCFF118PQI, ENCFF121IDD, ENCFF137OYQ, ENCFF142PTA, ENCFF162FTA, ENCFF167GWU, ENCFF184ALY, ENCFF208BJY, ENCFF220GKL, ENCFF237JCE, ENCFF239RQP, ENCFF247VEN, ENCFF248XZC, ENCFF255XDN, ENCFF256UWN, ENCFF260BJB, ENCFF268YSJ, ENCFF271RFU, ENCFF272WGJ, ENCFF301VMF, ENCFF310HAL, ENCFF310WDZ, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332RWQ, ENCFF366CSN, ENCFF374VAZ, ENCFF377OQI, ENCFF397ZQU, ENCFF403RPK, ENCFF414IHO, ENCFF417INY, ENCFF438ROC, ENCFF439BEV, ENCFF450CUC, ENCFF456GLS, ENCFF460VXC, ENCFF462HZM, ENCFF483SQS, ENCFF504PGI, ENCFF512LAN, ENCFF515GXB, ENCFF536ZFC, ENCFF565FFU, ENCFF572JDP, ENCFF581ZWM, ENCFF585CYT, ENCFF588JAU, ENCFF591WVP, ENCFF598PMW, ENCFF601JTS, ENCFF657NUT, ENCFF673ZDG, ENCFF694EPZ, ENCFF696QTS, ENCFF698XCB, ENCFF699SBZ, ENCFF706BUS, ENCFF757JMT, ENCFF758BKM, ENCFF770WIT, ENCFF798TFC, ENCFF803ZUN, ENCFF812LAI, ENCFF814PHK, ENCFF816CPX, ENCFF818ZJQ, ENCFF843WRN, ENCFF853PNO, ENCFF881YOK, ENCFF916BSM, ENCFF927LFD, ENCFF931NMQ, ENCFF944RHJ, ENCFF964HGL, ENCFF976SMI, ENCFF984QED, ENCFF985NHB, ENCFF986DZE chr3 5122438 5122439 + Predicted LINE|L1|L1MdF_V ENSMUSG00000096922.3, Gm17308 SRR2089604, SRR2089605, SRR2089607, SRR2089609, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 51469629 51469630 - Predicted SINE|B4|ID_B1 ENSMUSG00000037111.10, Setd7 ENCFF002EZW, ENCFF269UZL, ENCFF279BVM, ENCFF347UAC, ENCFF013HYW, ENCFF148XRK, ENCFF156YWS, ENCFF296VFB, ENCFF454ZUS, ENCFF455DHP, ENCFF487DYP, ENCFF636NES, ENCFF725ATS, ENCFF747XPP, ENCFF775SSI, ENCFF914YDJ, ENCFF924LPZ, ENCFF052RNG, ENCFF429ZEH, ENCFF517BAY, ENCFF698WQO, ENCFF794MMU, ENCFF248ELC, ENCFF510IAG, ENCFF574YMK chr3 5174018 5174019 + Predicted LINE|L1|L1MdV_II ENSMUSG00000096922.3, Gm17308 SRR2089610, SRR2089615, SRR2089617, SRR2089620, SRR2089621, SRR2089630, SRR2089635, SRR2089643, SRR2089644 chr3 5174345 5174346 + Predicted LINE|L1|L1MdV_II ENSMUSG00000096922.3, Gm17308 SRR2089612, SRR2089618, SRR2089634, SRR2089639 chr3 51936538 51936556 - Predicted SINE|B2|B2_Mm1t ENSMUSG00000061143.16, Maml3 SRR2089603, SRR2089604, SRR2089605, SRR2089607, SRR2089610, SRR2089612, SRR2089614, SRR2089615, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089646, SRR2089647 chr3 52012229 52012338 - Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000061143.16, Maml3 ENCFF001NDZ, ENCFF001NEC, ENCFF001RTN, ENCFF002FAG, ENCFF005GQR, ENCFF013CHH, ENCFF023MKT, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF101BDM, ENCFF115LWP, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF173IVH, ENCFF222GPK, ENCFF245ZOR, ENCFF247QZW, ENCFF261ZZF, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF296VFB, ENCFF308FEA, ENCFF330FNX, ENCFF335ZSA, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF374YTS, ENCFF377LAC, ENCFF408NBX, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF468AKL, ENCFF478KOR, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF604SXL, ENCFF608LAL, ENCFF632LPV, ENCFF636NES, ENCFF643XFK, ENCFF651SDJ, ENCFF654AEJ, ENCFF667SYQ, ENCFF694NRG, ENCFF721BNO, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF766LGO, ENCFF775SSI, ENCFF826RUZ, ENCFF840XYZ, ENCFF845NXM, ENCFF860XMD, ENCFF912MUD, ENCFF923VUD, ENCFF933KQV, ENCFF935LAF, ENCFF939IUH, ENCFF975NCY, ENCFF275TCB, ENCFF406NLL, ENCFF409ABB, ENCFF062GNP, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF260KJY, ENCFF269AST, ENCFF302TQH, ENCFF319SDE, ENCFF361MLD, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF477YHR, ENCFF481CFU, ENCFF499CDP, ENCFF499GDC, ENCFF517DCU, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF670VVN, ENCFF671TUD, ENCFF716YKR, ENCFF728WJB, ENCFF854IBU, ENCFF970VKL, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198226, SRR15198228, SRR2927112 chr3 52093903 52093904 - Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000103655.2, Gm37202 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR11428468, SRR11428469, SRR13142118, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 52149389 52149390 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000102510.3, Or14m1-ps1 SRR2089605, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089636, SRR2089641, SRR2089650 chr3 52149987 52149989 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000102510.3, Or14m1-ps1 SRR2089605, SRR2089631, SRR2089636, SRR2089638, SRR2089639, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 52375981 52375992 + Annotated LINE|CR1|L3 ENSMUSG00000120422.1, ENSMUSG00000120422 ENSMUST00000243210.1, ENSMUST00000245388.1, ENSMUST00000245300.1, ENSMUST00000244724.1 chr3 53342274 53342275 - Predicted SINE|B2|B3 ENSMUSG00000105397.2, Gm43471 SRR2089635, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 54694857 54694862 + Predicted LTR|ERVK|RLTR16 ENSMUSG00000027796.3, Smad9 ENCFF001RTJ, DRR091690, DRR091692, SRR10697195, SRR10697199, SRR10697203, SRR11428470, SRR13142119, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178984, SRR9178989, SRR9178990, SRR9178991 chr3 54967036 54967037 + Predicted LTR|ERVK|RMER20C_Mm ENSMUSG00000106589.2, 4931419H13Rik SRR6904683, SRR6904684, SRR6904685 chr3 5580387 5580430 - Annotated LTR|ERVK|RMER17A2 ENSMUSG00000093557.2, 4930555M17Rik ENSMUST00000176666.2, NR_166469.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2927111, SRR2927112, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985 chr3 57604899 57604900 - Predicted LTR|ERVK|RLTR11A2 ENSMUSG00000074591.9, Ankub1 SRR13142120, SRR15198217, SRR9178979 chr3 57831384 57831385 + Predicted LTR|ERV1|LTR37B ENSMUSG00000104730.2, ENSMUSG00000106246.2, Gm42511, Gm18867 SRR2089603, SRR2089606, SRR2089615, SRR2089621, SRR2089622, SRR2089623, SRR2089637, SRR2089642, SRR2089650 chr3 57849755 57849756 + Predicted LTR|ERVL-MaLR|MTB_Mm ENSMUSG00000104730.2, Gm42511 SRR2089606, SRR2089619, SRR2089620, SRR2089630, SRR2089647, SRR2089649 chr3 58071353 58071354 + Annotated LTR|ERVL|LTR41B ENSMUSG00000104586.2, 4921539H07Rik ENSMUST00000200072.2 DRR091689, DRR091698, DRR091699, SRR11428467, SRR11428469, SRR11428470, SRR13142122, SRR15198228, SRR2040601, SRR9080664, SRR9080666, SRR9178983, SRR9178989 chr3 5815866 5815867 + Annotated LINE|L1|L1MdFanc_II ENSMUSG00000103034.2, Gm8797 ENSMUST00000192045.2 chr3 59631550 59631551 + Predicted LTR|ERVK|RMER4B ENSMUSG00000090527.3, Aadacl2fm2 DRR091698, SRR10697200, SRR11428468, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr3 62272944 62272945 + Predicted LTR|ERVL|MERVL-int ENSMUSG00000036885.15, Arhgef26 SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr3 62277564 62277571 + Predicted SINE|B4|B4 ENSMUSG00000036885.15, Arhgef26 SRR2089605, SRR2089606, SRR2089622, SRR2089623, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 62389037 62389038 - Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000027770.6, Dhx36 ENCFF083CUR, ENCFF117BGT, ENCFF198NQV, ENCFF525POD, ENCFF535YBP, ENCFF552NWL, ENCFF667FDW, ENCFF946AGD, ENCFF234LUQ, ENCFF002ZAX, ENCFF012HVN, ENCFF013SNI, ENCFF035BBA, ENCFF039DES, ENCFF039PJR, ENCFF107YGR, ENCFF148BPZ, ENCFF151XBP, ENCFF239RQP, ENCFF256UWN, ENCFF271RFU, ENCFF343MZH, ENCFF353SEU, ENCFF374VAZ, ENCFF386HCR, ENCFF399TOF, ENCFF438ROC, ENCFF477MBL, ENCFF548HOL, ENCFF549IDH, ENCFF581ZWM, ENCFF661UPO, ENCFF681EEO, ENCFF687GPO, ENCFF848UMJ, ENCFF883APB, ENCFF951PCM, ENCFF953FGT chr3 63346672 63346673 + Annotated DNA|hAT-Charlie|Charlie8 ENSMUSG00000104336.2, Gm34240 ENSMUST00000192500.2, NR_153189.1 chr3 64752163 64752203 - Annotated LTR|ERVL-MaLR|MLT1A1 ENSMUSG00000097538.2, ENSMUSG00000062200.15, Gm26939, Vmn2r7 ENSMUST00000177146.2, ENSMUST00000161972.10, ENSMUST00000050123.4, NR_003962.1 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR5643190, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 65245706 65245725 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000090120.2, ENSMUSG00000104093.3, A730090N16Rik, A330015K06Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr3 65427598 65427621 - Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000074580.12, 4931440P22Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091699, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428468, SRR11428470, SRR13142120, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6904685, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178991 chr3 65867033 65867042 - Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000027829.16, Ccnl1 ENCFF005NBP, ENCFF051JSS, ENCFF116MYR, ENCFF121BYS, ENCFF139MHN, ENCFF178PMH, ENCFF186RYS, ENCFF218HNK, ENCFF296ASE, ENCFF308LTO, ENCFF310HPH, ENCFF392TDB, ENCFF482MUH, ENCFF519IZA, ENCFF793STU, ENCFF813ZJI, ENCFF922KQY, ENCFF170XMM, ENCFF446FOZ, ENCFF581KUX, ENCFF686KMX, ENCFF704WWK, ENCFF855FCX, ENCFF009AON, ENCFF055PZZ, ENCFF066MTU, ENCFF128CYW, ENCFF156XMZ, ENCFF170KWW, ENCFF254TFB, ENCFF315OFF, ENCFF348RRM, ENCFF363PDR, ENCFF406LFV, ENCFF424GQM, ENCFF458EUS, ENCFF512XKX, ENCFF601JTS, ENCFF611OFH, ENCFF633QXI, ENCFF663TDQ, ENCFF673GRZ, ENCFF696VQM, ENCFF741PLM, ENCFF746ZCS, ENCFF747VYT, ENCFF769FVU, ENCFF806XNV, ENCFF866IHG, ENCFF872SFD, ENCFF877SON, ENCFF937KFC, ENCFF952EQQ, ENCFF959CWA, ENCFF966VVA, ENCFF998BIQ, ENCFF242SVY, ENCFF423TSB, SRR13142122 chr3 65867689 65867737 - Predicted LTR|ERVK|RLTR18B ENSMUSG00000027829.16, Ccnl1 ENCFF084PUC, ENCFF091WMS, ENCFF125HRQ, ENCFF140VGY, ENCFF214IUN, ENCFF261OTH, ENCFF351JWR, ENCFF390QUP, ENCFF480BVV, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF533JUU, ENCFF534DID, ENCFF595GFM, ENCFF743QXJ, ENCFF775BPV, ENCFF796NHQ, ENCFF808XFI, ENCFF841OXD, ENCFF852ZDB, ENCFF885AJK, ENCFF991TPB, ENCFF027RRZ, ENCFF756QCA, ENCFF826RUZ, ENCFF050CMF, ENCFF053NFR, ENCFF070YMI, ENCFF103SQR, ENCFF126WDH, ENCFF157IFW, ENCFF158HQO, ENCFF172DMS, ENCFF178ZXW, ENCFF199AAD, ENCFF258WLS, ENCFF268ZHE, ENCFF275HRX, ENCFF296UDD, ENCFF352KGC, ENCFF426FAF, ENCFF456GLS, ENCFF576EOD, ENCFF578PSU, ENCFF594GIP, ENCFF615ULR, ENCFF619SKV, ENCFF644GYU, ENCFF693POR, ENCFF723QWN, ENCFF780UQU, ENCFF809QBQ, ENCFF811ZQO, ENCFF860SGX, ENCFF869DVY, ENCFF926FRX, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF999ZYF chr3 65867807 65867808 - Predicted LTR|ERVK|RLTR18B ENSMUSG00000027829.16, Ccnl1 ENCFF084PUC, ENCFF140VGY, ENCFF214IUN, ENCFF261OTH, ENCFF480BVV, ENCFF514BEA, ENCFF514JOV, ENCFF533JUU, ENCFF548SLN, ENCFF743QXJ, ENCFF775BPV, ENCFF808XFI, ENCFF841OXD, ENCFF937GBW, ENCFF027RRZ, ENCFF756QCA, ENCFF826RUZ, ENCFF053NFR, ENCFF056UGH, ENCFF083IRL, ENCFF103SQR, ENCFF126WDH, ENCFF178ZXW, ENCFF199AAD, ENCFF205CDI, ENCFF258WLS, ENCFF268ZHE, ENCFF275HRX, ENCFF299ENO, ENCFF352KGC, ENCFF426FAF, ENCFF456GLS, ENCFF576EOD, ENCFF615ULR, ENCFF644GYU, ENCFF693POR, ENCFF809QBQ, ENCFF811ZQO, ENCFF953WBM, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF999ZYF, ENCFF075EMK chr3 66140544 66140581 - Predicted LINE|L1|L1MdTf_I ENSMUSG00000027831.10, Veph1 ENCFF005NBP, ENCFF027IIP, ENCFF051PTY, ENCFF056GXQ, ENCFF064PBF, ENCFF074HUJ, ENCFF082HKQ, ENCFF092YWY, ENCFF106RGV, ENCFF117BGT, ENCFF133PEB, ENCFF138QRF, ENCFF147GLI, ENCFF162UVS, ENCFF205GJI, ENCFF212JFB, ENCFF229AIZ, ENCFF262URV, ENCFF264DCN, ENCFF279BVM, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF295SYY, ENCFF312CZB, ENCFF332ZPO, ENCFF352VWM, ENCFF379JPQ, ENCFF393UZV, ENCFF432ZLQ, ENCFF443PSO, ENCFF495SQR, ENCFF521UGJ, ENCFF524EDD, ENCFF540XSD, ENCFF552NWL, ENCFF560YXX, ENCFF581WWO, ENCFF589MBR, ENCFF606EDP, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF698LQF, ENCFF707QJV, ENCFF711WAC, ENCFF727WWV, ENCFF734FHF, ENCFF745HSV, ENCFF755FCM, ENCFF771LLL, ENCFF773VFS, ENCFF783MLO, ENCFF784LWT, ENCFF793CWJ, ENCFF813ZJI, ENCFF828WIK, ENCFF849GVQ, ENCFF858CRT, ENCFF876MJS, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF896IIZ, ENCFF896MQK, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF924VRI, ENCFF931DDH, ENCFF941QCZ, ENCFF951UXE, ENCFF985BLV, ENCFF003GJV, ENCFF006JHA, ENCFF009AVK, ENCFF022ACG, ENCFF024CUG, ENCFF028XDY, ENCFF034WGV, ENCFF035BBA, ENCFF047LTH, ENCFF055PZZ, ENCFF065UBR, ENCFF067OYG, ENCFF068CQU, ENCFF077CYB, ENCFF080BTV, ENCFF082OML, ENCFF087XKQ, ENCFF088PZI, ENCFF106GHS, ENCFF106RLX, ENCFF116DGU, ENCFF118PQI, ENCFF118YHP, ENCFF124SSE, ENCFF134PXJ, ENCFF136TYP, ENCFF137OYQ, ENCFF141YUD, ENCFF142PTA, ENCFF144EDQ, ENCFF149BQJ, ENCFF151XBP, ENCFF163GEC, ENCFF167EHX, ENCFF175LCC, ENCFF177LXI, ENCFF179HJV, ENCFF185TRT, ENCFF189JVE, ENCFF203EWG, ENCFF209LBA, ENCFF210BVU, ENCFF221ZQB, ENCFF222MKT, ENCFF228CMT, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF242MZE, ENCFF249LSC, ENCFF255XDN, ENCFF260UQJ, ENCFF272VMY, ENCFF277JGD, ENCFF296ITI, ENCFF297PPT, ENCFF301VMF, ENCFF303BIV, ENCFF307OHZ, ENCFF308WGP, ENCFF310WDZ, ENCFF315HBU, ENCFF319YFJ, ENCFF332RWQ, ENCFF335UNU, ENCFF338DAA, ENCFF350KYC, ENCFF358UHV, ENCFF378TYU, ENCFF382VCK, ENCFF386XTQ, ENCFF397ZQU, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF411YXB, ENCFF417INY, ENCFF421DHQ, ENCFF429ZEH, ENCFF437QAE, ENCFF437ZSM, ENCFF439HXQ, ENCFF450CUC, ENCFF454DOT, ENCFF456GLS, ENCFF462HZM, ENCFF468RDR, ENCFF479WHZ, ENCFF483KXD, ENCFF497KLL, ENCFF498OHV, ENCFF505YPK, ENCFF513BRJ, ENCFF518TUP, ENCFF522KWW, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF537DSI, ENCFF538ZTW, ENCFF549IDH, ENCFF559QXN, ENCFF561CZI, ENCFF573WSG, ENCFF578MOR, ENCFF578YPJ, ENCFF584ZUK, ENCFF587HBC, ENCFF591WVP, ENCFF593TQB, ENCFF595NMM, ENCFF596PMK, ENCFF601JTS, ENCFF603QSQ, ENCFF635XED, ENCFF637GVH, ENCFF640RWH, ENCFF646GBS, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF661UPO, ENCFF668SQN, ENCFF669PMR, ENCFF678CRA, ENCFF681EEO, ENCFF685GDB, ENCFF687GPO, ENCFF699SBZ, ENCFF711OYQ, ENCFF711XWR, ENCFF724VJN, ENCFF735BVR, ENCFF740WXS, ENCFF741PLM, ENCFF750IZJ, ENCFF753HNF, ENCFF757JMT, ENCFF759HJA, ENCFF765AQX, ENCFF781XUM, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF791ZDR, ENCFF794GVC, ENCFF796TQV, ENCFF816CPX, ENCFF817NCH, ENCFF820JMO, ENCFF840DKD, ENCFF843WRN, ENCFF848UMJ, ENCFF849PKR, ENCFF854LJN, ENCFF858OFI, ENCFF863ENS, ENCFF881YOK, ENCFF896XAZ, ENCFF901KUE, ENCFF903KDM, ENCFF916BSM, ENCFF917KUH, ENCFF926IDV, ENCFF927LFD, ENCFF931NMQ, ENCFF932XKS, ENCFF936LNA, ENCFF939QLN, ENCFF948YKH, ENCFF949QCF, ENCFF964HGL, ENCFF970PLY, ENCFF974XWJ, ENCFF976SMI, ENCFF994JUO, ENCFF998BIQ chr3 68022065 68022066 + Predicted LTR|ERVK|IAPLTR1_Mm ENSMUSG00000027777.16, Schip1 ENCFF001NCP, ENCFF001NCR, ENCFF027IIP, ENCFF059IQN, ENCFF345OIF, ENCFF504ULZ, ENCFF933UPG, ENCFF013HYW, ENCFF017LOD, ENCFF274ESJ, ENCFF118YHP, ENCFF137OYQ, ENCFF421DHQ, ENCFF427YDU, ENCFF429ZEH, ENCFF591WVP, ENCFF644EGG, ENCFF705CES, ENCFF821HAZ, ENCFF959CWA, ENCFF984QED, ENCFF494ZWE, ENCFF582WGH, ENCFF671TUD, ENCFF904RJF chr3 74033766 74033767 - Annotated LTR|ERVK|RMER17B2 NR_168318.1 chr3 79081242 79081243 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000062232.15, Rapgef2 ENCFF092YWY, ENCFF196PBF, ENCFF312CZB, ENCFF332ZPO, ENCFF401HCS, ENCFF521UGJ, ENCFF524EDD, ENCFF710DAI, ENCFF881TID, ENCFF910ESY, ENCFF003GJV, ENCFF057MDU, ENCFF141YUD, ENCFF167GWU, ENCFF210BVU, ENCFF264PYB, ENCFF338DAA, ENCFF350PHR, ENCFF422ZNC, ENCFF561CZI, ENCFF585CYT, ENCFF643SBQ, ENCFF661UPO, ENCFF683WFA, ENCFF781MKK, ENCFF789AOM, ENCFF825JNK, ENCFF840EFC, ENCFF845NUY, ENCFF848LWJ, ENCFF896XAZ, ENCFF899EJT, ENCFF917KUH chr3 79442260 79442337 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000061175.13, Fnip2 ENCFF059IQN, ENCFF083CUR, ENCFF086ZMV, ENCFF151QHP, ENCFF160HKC, ENCFF162UVS, ENCFF179WPT, ENCFF198NQV, ENCFF229AIZ, ENCFF234MZC, ENCFF264DCN, ENCFF265LKR, ENCFF283XKV, ENCFF287KDR, ENCFF291LRG, ENCFF304MIZ, ENCFF330IYN, ENCFF331WKS, ENCFF349LIW, ENCFF393UZV, ENCFF401HCS, ENCFF494YXM, ENCFF519IZA, ENCFF525POD, ENCFF540XSD, ENCFF600AGS, ENCFF606EDP, ENCFF608NVM, ENCFF622NXP, ENCFF639RWJ, ENCFF794FBC, ENCFF844QDN, ENCFF883UYA, ENCFF931HCN, ENCFF934ULS, ENCFF979WZO, ENCFF002ZAX, ENCFF003GJV, ENCFF006JHA, ENCFF009AVK, ENCFF012KPC, ENCFF013SNI, ENCFF039DES, ENCFF043DTH, ENCFF045YRV, ENCFF064VAD, ENCFF067OYG, ENCFF068KDU, ENCFF080DNG, ENCFF087OKI, ENCFF087XKQ, ENCFF089SWU, ENCFF090EUZ, ENCFF107YGR, ENCFF111MWQ, ENCFF116DGU, ENCFF127KHN, ENCFF136TYP, ENCFF137OYQ, ENCFF141YUD, ENCFF198XFF, ENCFF207HZS, ENCFF208BJY, ENCFF210BVU, ENCFF220GKL, ENCFF223SMG, ENCFF233RGQ, ENCFF239RQP, ENCFF242MZE, ENCFF254TFB, ENCFF254VIN, ENCFF255XDN, ENCFF260BJB, ENCFF272VMY, ENCFF277JGD, ENCFF292KWK, ENCFF297PPT, ENCFF311MZV, ENCFF319YFJ, ENCFF332RWQ, ENCFF335UNU, ENCFF350KYC, ENCFF358UHV, ENCFF366CSN, ENCFF366IEQ, ENCFF370VOV, ENCFF386HCR, ENCFF399TOF, ENCFF403CRC, ENCFF404HLB, ENCFF417INY, ENCFF420REU, ENCFF437QAE, ENCFF437ZSM, ENCFF438ROC, ENCFF439BEV, ENCFF439HXQ, ENCFF450CUC, ENCFF453MPR, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF468RDR, ENCFF477MBL, ENCFF479WHZ, ENCFF483SQS, ENCFF486GBM, ENCFF507VMW, ENCFF515GXB, ENCFF516QKR, ENCFF517BAY, ENCFF522KWW, ENCFF531JWM, ENCFF537DSI, ENCFF543GNI, ENCFF549KAB, ENCFF557JPW, ENCFF559QXN, ENCFF561CZI, ENCFF562MVN, ENCFF565CON, ENCFF565FFU, ENCFF572SQL, ENCFF581ZWM, ENCFF585CYT, ENCFF588JAU, ENCFF593TQB, ENCFF603QSQ, ENCFF611QZE, ENCFF612KDP, ENCFF613SEJ, ENCFF637GVH, ENCFF646GBS, ENCFF658NHH, ENCFF669PMR, ENCFF673ZDG, ENCFF678CRA, ENCFF680OWA, ENCFF681EEO, ENCFF683WFA, ENCFF687GPO, ENCFF694EPZ, ENCFF706BUS, ENCFF740TFX, ENCFF746ZCS, ENCFF750IZJ, ENCFF755REI, ENCFF759HJA, ENCFF759WDO, ENCFF770WIT, ENCFF772QLP, ENCFF812LAI, ENCFF814PHK, ENCFF816CPX, ENCFF817NCH, ENCFF829WND, ENCFF840EFC, ENCFF845NUY, ENCFF847IGW, ENCFF848LWJ, ENCFF858OFI, ENCFF859MTL, ENCFF881DTW, ENCFF885ZAO, ENCFF899EJT, ENCFF903KDM, ENCFF907KCF, ENCFF910CTW, ENCFF928YDQ, ENCFF930JCE, ENCFF948BDY, ENCFF953FGT, ENCFF955WXI, ENCFF956RCJ, ENCFF985NHB, ENCFF986DZE, ENCFF994JUO, ENCFF996WVL chr3 79759375 79759376 - Predicted LTR|ERV1|RLTR23 ENSMUSG00000027956.12, Tmem144 SRR11428468, SRR11428470, SRR9178991 chr3 79760069 79760100 - Annotated LTR|ERVL-MaLR|MLT1F ENSMUSG00000027956.12, Tmem144 ENSMUST00000193410.3, ENSMUST00000192341.2, NM_001379542.1, NR_166775.1, NR_166774.1, NR_166773.1, NR_166772.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643199, SRR6338004, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr3 8031472 8031473 - Predicted LTR|ERVK|RMER17A ENSMUSG00000100010.6, 1700010I02Rik DRR091690, DRR091697, SRR11428469, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9178985 chr3 81851881 81851903 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000028015.4, Ctso ENCFF264RIV, ENCFF313ERY, ENCFF462ABU, ENCFF491XRO, ENCFF581WWO, ENCFF667FDW, ENCFF671ERF, ENCFF764TGO, ENCFF913CFN, ENCFF931HCN, ENCFF946AGD, ENCFF960LQP, ENCFF028XDY, ENCFF098AYQ, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF163BDT, ENCFF198XFF, ENCFF228CMT, ENCFF286GUQ, ENCFF433QNW, ENCFF466RIS, ENCFF484PQK, ENCFF527XBQ, ENCFF581ZWM, ENCFF611QZE, ENCFF635XED, ENCFF678CRA, ENCFF759HJA, ENCFF881DTW, ENCFF931NMQ, ENCFF951PCM, ENCFF953FGT, ENCFF996AOW chr3 83475693 83475694 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000101334.2, 1700028M03Rik DRR091691, DRR091695, SRR11428469, SRR15198217, SRR15198222, SRR9080665 chr3 83481421 83481429 - Annotated LTR|ERVL|MER21C ENSMUSG00000101334.2, 1700028M03Rik ENSMUST00000185938.2, NR_036591.1 SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR2040601, SRR9178981, SRR9178982, SRR9178985 chr3 84020519 84020520 - Predicted LTR|ERVL|MERVL_2A-int ENSMUSG00000033752.8, Mnd1 DRR091692, DRR091693, DRR091696, SRR11428468, SRR11428470, SRR13142118, SRR13142120, SRR9178976, SRR9178979, SRR9178986 chr3 85653515 85653516 - Annotated LTR|ERVK|RMER4B NM_172682.3 chr3 85653572 85653573 - Annotated LTR|ERVK|RMER4B ENSMUSG00000051000.18, Fhip1a ENSMUST00000118408.8 chr3 86011329 86011396 + Predicted LTR|ERVK|RLTR20A4 ENSMUSG00000028082.15, Sh3d19 ENCFF001NDZ, ENCFF001NEC, ENCFF002FAA, ENCFF022FSI, ENCFF027BYX, ENCFF051JGE, ENCFF084PUC, ENCFF091WMS, ENCFF115KZV, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF126HTW, ENCFF139MHN, ENCFF140VGY, ENCFF178ZVU, ENCFF179WPT, ENCFF189WYV, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF225MMR, ENCFF227OTT, ENCFF262URV, ENCFF274WSX, ENCFF297CWJ, ENCFF326TQL, ENCFF331WKS, ENCFF372GOY, ENCFF381JXP, ENCFF392TDB, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF437AJW, ENCFF449MIK, ENCFF450WAV, ENCFF478FDA, ENCFF482MUH, ENCFF527VIY, ENCFF534DID, ENCFF590NVM, ENCFF625JLB, ENCFF670CXH, ENCFF711WAC, ENCFF761RKP, ENCFF782JNB, ENCFF793STU, ENCFF808XFI, ENCFF852ZDB, ENCFF865WQE, ENCFF880FYC, ENCFF885AJK, ENCFF886XAI, ENCFF912RLS, ENCFF922KQY, ENCFF931PFF, ENCFF935XRF, ENCFF937GBW, ENCFF991TPB, ENCFF049SEE, ENCFF053NFR, ENCFF065ZIE, ENCFF083IRL, ENCFF087IUJ, ENCFF088SVK, ENCFF116QKZ, ENCFF133KGZ, ENCFF156XMZ, ENCFF156ZQH, ENCFF199AAD, ENCFF235HER, ENCFF258WLS, ENCFF268ZHE, ENCFF275HRX, ENCFF279EVY, ENCFF291SCS, ENCFF313IFI, ENCFF332IRR, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF359DNK, ENCFF406LFV, ENCFF417OEG, ENCFF424GQM, ENCFF429TQT, ENCFF459TYQ, ENCFF478BEL, ENCFF478YRJ, ENCFF490ULA, ENCFF492HRC, ENCFF505PJK, ENCFF505WKA, ENCFF543PXT, ENCFF548JDU, ENCFF563FUC, ENCFF576EOD, ENCFF596INO, ENCFF598LJF, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF644GYU, ENCFF680WIN, ENCFF693POR, ENCFF712BKP, ENCFF737VKP, ENCFF765UBL, ENCFF780UQU, ENCFF809QBQ, ENCFF811ZQO, ENCFF860SGX, ENCFF864DTX, ENCFF926FRX, ENCFF999ZYF chr3 87197659 87197660 + Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000015854.8, Cd5l DRR091694, SRR15198219, SRR15198222, SRR15198223, SRR15198225, SRR2927111, SRR2927112, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991 chr3 88277028 88277029 - Annotated LTR|ERVK|RLTR10D ENSMUSG00000074489.10, Bglap3 ENSMUST00000140259.2 chr3 88280047 88280050 - Annotated LTR|ERVK|RLTR10D ENSMUSG00000074489.10, Bglap3 ENSMUST00000107543.8, ENSMUST00000107542.2, NM_001305448.1, NM_001305449.1 ENCFF001NDA, ENCFF001NDD, ENCFF001RTN, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF854MWX, SRR2040601 chr3 90257695 90257696 + Predicted LINE|L2|AmnL2-1 ENSMUSG00000042390.10, Gatad2b ENCFF002FAA, ENCFF002FAC, ENCFF143PHU, ENCFF221NAP, ENCFF502ANK, ENCFF589MBR, ENCFF584ZUK, ENCFF851JLX, SRR13142121, SRR13142123, SRR3178204 chr3 90298422 90298423 - Predicted SINE|B4|B4A ENSMUSG00000027932.15, Slc27a3 ENCFF156YWS, ENCFF330FNX, ENCFF587VDB, ENCFF667SYQ, ENCFF499CDP, ENCFF510AYI, DRR091689, DRR091690, DRR091691, DRR091693, DRR091695, DRR091698, SRR11428468, SRR13142121 chr3 93653307 93653308 + Predicted LINE|L1|L1_Mur3 ENSMUSG00000068879.5, Gm5773 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr3 94224698 94224726 + Predicted LINE|RTE-BovB|MamRTE1 ENSMUSG00000028145.10, Them4 ENCFF059IQN, ENCFF421SNO, ENCFF437AJW, ENCFF514BEA, ENCFF874ELO, ENCFF922KQY, ENCFF060JCS, ENCFF173IVH, ENCFF261ZZF, ENCFF284AEN, ENCFF339MSB, ENCFF442FJC, ENCFF516BTG, ENCFF519YGA, ENCFF567AFB, ENCFF642YTY, ENCFF643XFK, ENCFF657OJR, ENCFF721ASG, ENCFF737OUQ, ENCFF766LGO, ENCFF803VZZ, ENCFF838YLT, ENCFF923VUD, ENCFF258WLS, ENCFF766UJI, ENCFF780UQU, ENCFF886UAF, ENCFF178HDG, ENCFF555BQD, ENCFF592WZB, ENCFF716YKR, ENCFF782WDV, ENCFF783KGQ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091698, DRR091699, SRR5643190, SRR5643199, SRR6904683, SRR9080665 chr3 94891295 94891296 + Predicted LTR|ERVK|ERVB7_2-LTR_MM ENSMUSG00000038861.15, Pi4kb ENCFF001RTF, ENCFF002FAA, ENCFF073RJJ, ENCFF782CNW, DRR091688, SRR13142118, SRR9080664 chr3 95123579 95123580 - Predicted SINE|B4|RSINE1 ENSMUSG00000038766.17, Gabpb2 ENCFF001RTF, ENCFF001RTJ, ENCFF002DMZ, ENCFF002ERU, ENCFF002ERW, ENCFF106GQS, ENCFF489IGD, ENCFF641QXI, ENCFF391UFN, ENCFF455DHP, ENCFF608LAL, ENCFF642YTY, ENCFF657UWH, ENCFF255XDN, ENCFF497KLL, ENCFF742DJH, ENCFF366CUG, ENCFF906OAF, SRR15198218 chr3 9575211 9575283 - Predicted LINE|L1|L1Lx_IV ENSMUSG00000040209.13, Zfp704 ENCFF117BGT, ENCFF138TOM, ENCFF330LWU, ENCFF565YHF, ENCFF705JRV, ENCFF707QJV, ENCFF743RQJ, ENCFF764TGO, ENCFF771LLL, ENCFF917RNE, ENCFF942WIP, ENCFF030IFE, ENCFF047LTH, ENCFF111MWQ, ENCFF127KHN, ENCFF141YUD, ENCFF143RTP, ENCFF148BPZ, ENCFF162FTA, ENCFF166UTY, ENCFF223SMG, ENCFF254TFB, ENCFF256UWN, ENCFF272WGJ, ENCFF374VAZ, ENCFF437QAE, ENCFF466RIS, ENCFF515GXB, ENCFF591WVP, ENCFF640RWH, ENCFF643SBQ, ENCFF644EGG, ENCFF667RGF, ENCFF705CES, ENCFF772QLP, ENCFF786BUI, ENCFF806MTS, ENCFF883APB, ENCFF906CJJ, ENCFF916BSM chr3 96308868 96308869 + Predicted LTR|ERVK|RMER12B ENSMUSG00000097299.2, Gm26654 DRR091688, DRR091691, DRR091695, SRR15198218, SRR15198219, SRR15198220, SRR15198225, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr3 9677318 9677319 + Predicted LINE|L1|Lx8b ENSMUSG00000120589.1, ENSMUSG00000120589 SRR2089603, SRR2089606, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr3 9727114 9727115 + Predicted LTR|ERVK|RMER20C_Mm ENSMUSG00000103876.2, Gm17806 SRR2089640, SRR2089649, SRR2089651 chr3 98046903 98046904 + Predicted LTR|ERVL|LTR75 ENSMUSG00000027878.12, Notch2 ENCFF002FAA, ENCFF002FAC, ENCFF143PHU, ENCFF502ANK, ENCFF642YTY, ENCFF407JTK chr3 98552849 98552850 - Annotated LTR|ERVL-MaLR|ORR1D1 NM_008295.2 ENCFF001RTD, ENCFF001RTN, ENCFF223BXU, ENCFF683CWD, ENCFF838YLT chr3 98721690 98721759 - Annotated LTR|ERVL|MT2A ENSMUSG00000027869.15, Hsd3b6 ENSMUST00000029463.13, ENSMUST00000196706.2, NM_013821.3 ENCFF027RRZ, ENCFF033ZUH, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF143BIC, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF251WZA, ENCFF269WEZ, ENCFF284AEN, ENCFF330FNX, ENCFF339MSB, ENCFF364LFJ, ENCFF442FJC, ENCFF446FOZ, ENCFF510LAE, ENCFF521NCL, ENCFF567AFB, ENCFF573UIH, ENCFF581KUX, ENCFF608LAL, ENCFF651SDJ, ENCFF657OJR, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF826RUZ, ENCFF834VIK, ENCFF838YLT, ENCFF845NXM, ENCFF854KNE, ENCFF862FYE, ENCFF912MUD, ENCFF923VUD, ENCFF933MOZ, ENCFF943XKB, ENCFF952BCB, ENCFF969WLB, ENCFF975NCY, ENCFF197NCG, ENCFF242SVY, ENCFF306ADU, ENCFF342GAL, ENCFF366CUG, ENCFF454JTI, ENCFF481CFU, ENCFF555BQD, ENCFF667KKO, ENCFF715CAJ, ENCFF827NYZ, ENCFF906OAF, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178991 chr3 98767109 98767110 - Annotated LINE|L2|L2d2 ENSMUSG00000027871.17, Hsd3b1 ENSMUST00000107016.10, ENSMUST00000029465.10, NM_008293.4, NM_001304800.1 ENCFF001RTN, ENCFF339MSB, ENCFF754TOT, ENCFF845NXM chr4 101040555 101040562 - Predicted SINE|Alu|PB1D10 ENSMUSG00000028530.15, Jak1 SRR2089607, SRR2089622, SRR2089630, SRR2089631, SRR2089632, SRR2089634, SRR2089635, SRR2089637, SRR2089638, SRR2089647, SRR2089651 chr4 101310914 101310921 + Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000028527.19, Ak4 DRR091690, DRR091692, DRR091693, DRR091698, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697203, SRR15198217, SRR15198219, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178992 chr4 103239697 103239719 + Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000086136.2, Gm12718 ENSMUST00000156144.2, ENSMUST00000150345.2, NR_040673.1 chr4 107546898 107546899 + Annotated LTR|ERVK|RMER6A ENSMUSG00000085549.8, 1700047F07Rik ENSMUST00000143064.8 ENCFF002FAE chr4 107680170 107680219 - Annotated LTR|ERVK|RLTR15 ENSMUSG00000073779.8, Lrp8os2 ENSMUST00000188737.7, ENSMUST00000138289.2, ENSMUST00000150323.2, NR_151514.1, NR_151515.1 ENCFF002FAG chr4 107740266 107740267 + Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000028609.7, Magoh ENCFF002DMZ, ENCFF143PHU, SRR6904683, SRR6904684, SRR6904685 chr4 107811105 107811130 + Annotated LTR|ERVK|RLTR15 ENSMUSG00000086713.2, 4930407G08Rik ENSMUST00000145831.2, NR_131071.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 107814214 107814215 + Predicted LTR|ERVK|MYSERV16_I ENSMUSG00000086713.2, 4930407G08Rik SRR11428469, SRR15198218, SRR15198221, SRR15198223, SRR15198228 chr4 10797789 10797825 - Annotated SINE|MIR|MIR ENSMUSG00000086080.8, 1700123O12Rik ENSMUST00000146783.8, ENSMUST00000133829.8, ENSMUST00000141312.2, NR_045185.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 108002190 108002195 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000028603.16, Scp2 ENSMUST00000143340.2, ENSMUST00000130776.2 chr4 108063669 108063670 - Predicted SINE|B2|B3 ENSMUSG00000034645.15, Zyg11a SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089648, SRR2089649, SRR2089650 chr4 108621949 108621951 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000094958.2, 3110021N24Rik SRR2089603, SRR2089604, SRR2089605, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089618, SRR2089619, SRR2089621, SRR2089623, SRR2089629, SRR2089631, SRR2089632, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089643, SRR2089644, SRR2089646, SRR2089647, SRR2089650, SRR2089651 chr4 108936146 108936165 - Predicted SINE|MIR|MIR ENSMUSG00000028559.18, Osbpl9 DRR091688, DRR091689, DRR091690, DRR091691, DRR091697, DRR091698, SRR10697197, SRR10697200, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198227, SRR15198228, SRR2040601, SRR9080662, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 108990219 108990267 - Predicted SINE|Alu|PB1D7 ENSMUSG00000028559.18, Osbpl9 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR6338004, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178987, SRR9178988 chr4 109092459 109092460 + Annotated DNA|TcMar-Tigger|Tigger20a ENSMUSG00000028558.15, Calr4 ENSMUST00000106631.9, NM_001285897.1, NM_001285898.1 SRR11428468, SRR2927111 chr4 109092610 109092611 + Annotated DNA|TcMar-Tigger|Tigger20a ENSMUSG00000028558.15, Calr4 ENSMUST00000106628.8 DRR091697, SRR15198224 chr4 110363608 110363609 + Predicted LINE|L1|L1MdGf_II ENSMUSG00000061298.15, Agbl4 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR2040601 chr4 113552096 113552097 - Predicted LINE|L1|L1Lx_III ENSMUSG00000078598.12, Skint5 SRR2089622, SRR2089629, SRR2089631 chr4 115696146 115696450 + Annotated SINE|Alu|PB1D10 ENSMUSG00000028708.17, Mknk1 ENSMUST00000019677.12, ENSMUST00000144235.8, ENSMUST00000144427.8, ENSMUST00000153766.8, ENSMUST00000155412.8, ENSMUST00000106513.10, ENSMUST00000130819.8, ENSMUST00000151203.8, ENSMUST00000140315.2, NM_001355174.1, NM_021461.5, NM_001285488.1, NM_001285487.1, NM_001369238.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DMZ, ENCFF002DNB, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF040EEJ, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF076CCZ, ENCFF083CUR, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF108UNS, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF143PHU, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF168WHQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF196PBF, ENCFF198RBJ, ENCFF206EGD, ENCFF207DLW, ENCFF207OVG, ENCFF210BCB, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF234MZC, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF269UZL, ENCFF273CJD, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF287KDR, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330IYN, ENCFF330LWU, ENCFF331WKS, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF352VWM, ENCFF358UFZ, ENCFF363CYZ, ENCFF363XWU, ENCFF366BBB, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF379JPQ, ENCFF381JXP, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF426QFT, ENCFF437AJW, ENCFF439OFV, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF452AXW, ENCFF453XOG, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF472YPG, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF486NGU, ENCFF494YXM, ENCFF495YGN, ENCFF497YRP, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521IDK, ENCFF522VLI, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF534DID, ENCFF535YBP, ENCFF540XSD, ENCFF544BEF, ENCFF548SLN, ENCFF554PUC, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF575RUC, ENCFF581WWO, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF606EDP, ENCFF622NXP, ENCFF623BKO, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF671ERF, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF696TCH, ENCFF698LQF, ENCFF705JRV, ENCFF710DAI, ENCFF711WAC, ENCFF723QIC, ENCFF725RXU, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764TGO, ENCFF764ZUI, ENCFF771LLL, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF787LWL, ENCFF793CWJ, ENCFF793STU, ENCFF794FBC, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF863RVB, ENCFF865WQE, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF885AJK, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF942WIP, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF970JWC, ENCFF970XZM, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF994BOT, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF027RRZ, ENCFF033ZUH, ENCFF060JCS, ENCFF134HVE, ENCFF143BIC, ENCFF195JLT, ENCFF222GPK, ENCFF234LUQ, ENCFF236TUH, ENCFF284AEN, ENCFF296VFB, ENCFF308FEA, ENCFF315OOH, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF455DHP, ENCFF467LJD, ENCFF478KOR, ENCFF484HRX, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF521NCL, ENCFF533DWD, ENCFF572TOH, ENCFF581KUX, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF609ZVL, ENCFF632LPV, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF657OJR, ENCFF667SYQ, ENCFF670FEL, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF714CKE, ENCFF728TXU, ENCFF733MXU, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF782NPY, ENCFF785TEQ, ENCFF808PVJ, ENCFF829RHM, ENCFF831ISX, ENCFF860XMD, ENCFF912MUD, ENCFF914YDJ, ENCFF923VUD, ENCFF933KQV, ENCFF939IUH, ENCFF962FIU, ENCFF964WZW, ENCFF970VKB, ENCFF978EQI, ENCFF002SZY, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF008YSM, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF027GCQ, ENCFF028XDY, ENCFF030IFE, ENCFF033DWC, ENCFF035BBA, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF039DES, ENCFF039PJR, ENCFF041PJP, ENCFF043DTH, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF060FGD, ENCFF061WTN, ENCFF064VAD, ENCFF065ZIE, ENCFF066MTU, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF077YZF, ENCFF080BTV, ENCFF080REY, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF087IUJ, ENCFF087OKI, ENCFF087XKQ, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF090EUZ, ENCFF094RHV, ENCFF098AYQ, ENCFF098TCZ, ENCFF103SQR, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF116QKZ, ENCFF117ZMM, ENCFF118YHP, ENCFF120SMK, ENCFF126WDH, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF136DUH, ENCFF136TYP, ENCFF141YUD, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF150HVU, ENCFF151XBP, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF166UTY, ENCFF167GWU, ENCFF170KWW, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF194DAO, ENCFF197TJB, ENCFF198XFF, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF223SMG, ENCFF228CMT, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF240OIM, ENCFF242MZE, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF249LSC, ENCFF254TFB, ENCFF255XDN, ENCFF257EYD, ENCFF258WLS, ENCFF260UQJ, ENCFF261EQP, ENCFF264PYB, ENCFF267KZS, ENCFF268YSJ, ENCFF268ZHE, ENCFF272WGJ, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF292KWK, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF302KQL, ENCFF302MXO, ENCFF303BIV, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF310WDZ, ENCFF311MZV, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF319YFJ, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF331YYO, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346NGU, ENCFF348RRM, ENCFF350KYC, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF359DNK, ENCFF363PDR, ENCFF366IEQ, ENCFF369VAI, ENCFF376PQU, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF386CRY, ENCFF386HCR, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF404HLB, ENCFF406LFV, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF411YXB, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF438ROC, ENCFF450CUC, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF464KYQ, ENCFF466RIS, ENCFF468RDR, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF484PQK, ENCFF486BJT, ENCFF486GBM, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF515GXB, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF530DUT, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF538ZTW, ENCFF541HSQ, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF557JPW, ENCFF559QXN, ENCFF561CZI, ENCFF563FUC, ENCFF565CON, ENCFF565FFU, ENCFF566HCI, ENCFF569ELL, ENCFF572SQL, ENCFF573WSG, ENCFF576EOD, ENCFF578PSU, ENCFF578YPJ, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF584ZUK, ENCFF585CYT, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF596PMK, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF601JTS, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF612KDP, ENCFF613SEJ, ENCFF614WCH, ENCFF618PVF, ENCFF620FXM, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF644GYU, ENCFF646GBS, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF657NUT, ENCFF658NHH, ENCFF661TOM, ENCFF661UPO, ENCFF663SPA, ENCFF667RGF, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF673SLO, ENCFF678CRA, ENCFF680OWA, ENCFF680WIN, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF689RQK, ENCFF689UNV, ENCFF689ZLL, ENCFF691DJE, ENCFF693POR, ENCFF696QTS, ENCFF696TTO, ENCFF696VQM, ENCFF696XZL, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711XWR, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF754VQW, ENCFF755REI, ENCFF757JMT, ENCFF758BKM, ENCFF758JNE, ENCFF759WDO, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF780UQU, ENCFF781MKK, ENCFF781XUM, ENCFF786BUI, ENCFF791AUB, ENCFF791ZDR, ENCFF794MMU, ENCFF801SNQ, ENCFF804EWD, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF819JGD, ENCFF820JMO, ENCFF829HAB, ENCFF829WND, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF840EFC, ENCFF843WRN, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848UMJ, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF885ZAO, ENCFF886UAF, ENCFF896XAZ, ENCFF898CAY, ENCFF900AIQ, ENCFF903KDM, ENCFF903ULI, ENCFF904KCQ, ENCFF906CJJ, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF934VFW, ENCFF935ZEM, ENCFF936DQW, ENCFF936LNA, ENCFF937KFC, ENCFF938CNS, ENCFF938XTE, ENCFF939UBM, ENCFF946LMX, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF951PCM, ENCFF952EQQ, ENCFF952LUC, ENCFF953WBM, ENCFF955WXI, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974XWJ, ENCFF983GRF, ENCFF984QED, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF062GNP, ENCFF119IHT, ENCFF199IWW, ENCFF248ELC, ENCFF254YNR, ENCFF349AIG, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510IAG, ENCFF574YMK, ENCFF592WZB, ENCFF626KIV, ENCFF670VVN, ENCFF716YKR, ENCFF723MAR, ENCFF733LFV, ENCFF783KGQ, ENCFF803OIY, ENCFF847LGC, ENCFF888IIL, ENCFF911OIZ, ENCFF932SOZ, DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 115911339 115911340 + Predicted DNA|hAT-Tip100|Arthur1A ENSMUSG00000121130.1, ENSMUSG00000121130 ENCFF002EZW, ENCFF002FAE, ENCFF114PSQ, ENCFF065LOT, ENCFF065TCZ, ENCFF348FTH, ENCFF572TOH, ENCFF581KUX, ENCFF595WXV, ENCFF647TTU, ENCFF004AEL, ENCFF150HVU, ENCFF260UQJ, ENCFF275TCB, ENCFF277QHC, ENCFF749STK, DRR091688, DRR091690, DRR091691, DRR091694, DRR091695, DRR091697, DRR091699, SRR10697197, SRR10697200, SRR11428467, SRR11428469, SRR13142119, SRR15198217, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR5643191, SRR9178978, SRR9178991 chr4 115911480 115911481 + Predicted SINE|Alu|B1_Mur1 ENSMUSG00000121130.1, ENSMUSG00000121130 ENCFF114PSQ, ENCFF065TCZ, ENCFF348FTH, ENCFF448TTG, ENCFF572TOH, ENCFF721BNO, ENCFF733MXU, ENCFF962OCF, ENCFF967NOO, ENCFF118YHP, ENCFF260UQJ, ENCFF598WAL, ENCFF644EGG, ENCFF670VVN, DRR091689, DRR091692, SRR10697197, SRR10697200, SRR11428468, SRR13142119, SRR13142121, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178984, SRR9178987 chr4 116937872 116937873 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000028683.15, Eif2b3 ENCFF001NCP, ENCFF001NDA, ENCFF001NDD, ENCFF001NEC, ENCFF002ERU, ENCFF521IDK chr4 118219239 118219240 + Predicted LINE|RTE-BovB|MamRTE1 ENSMUSG00000006395.18, Hyi ENCFF002EZU, ENCFF147GLI, ENCFF221JIC, ENCFF393UZV, ENCFF544BEF, ENCFF888HEF, ENCFF888LGA, ENCFF993QUE, ENCFF052WUB, ENCFF359GCY, ENCFF446FOZ, ENCFF697AST, ENCFF834VIK, ENCFF945ICZ, ENCFF004AEL, ENCFF095NMU, ENCFF643SBQ, ENCFF753HNF, ENCFF779MMO, ENCFF186VNL, ENCFF349AIG chr4 118854436 118854470 - Predicted LTR|ERVK|RLTR44B ENSMUSG00000087238.2, Gm12865 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, DRR091694, DRR091695, SRR10697199, SRR11428468, SRR11428469, SRR11428470, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198228, SRR2927111, SRR6338004, SRR9178976, SRR9178977, SRR9178979, SRR9178981, SRR9178983, SRR9178984, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 12009042 12009058 - Annotated LINE|L2|L2d ENSMUSG00000085027.2, Gm11840 ENSMUST00000156947.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643192, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 120688775 120688776 - Annotated LTR|ERVL|MT2B NM_001048168.2 chr4 122567591 122567612 + Predicted LINE|L2|L2 ENSMUSG00000023263.4, 9530002B09Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 123752046 123752047 - Predicted LTR|ERVK|RLTR21 ENSMUSG00000086275.2, 1700121C08Rik DRR091691, DRR091694, SRR10697199, SRR15198221, SRR5643190, SRR5643191, SRR5643199, SRR5643201, SRR6338004, SRR9178982, SRR9178983 chr4 124226259 124226301 - Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000086978.2, 4933435F18Rik ENSMUST00000154878.2, ENSMUST00000125578.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9178977, SRR9178983, SRR9178984, SRR9178987, SRR9178989, SRR9178990, SRR9178992 chr4 124226360 124226365 - Predicted LTR|ERVL-MaLR|MTEb ENSMUSG00000086955.2, ENSMUSG00000086978.2, 1700021L23Rik, 4933435F18Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9178977, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 124226512 124226513 - Annotated LTR|ERVL-MaLR|MTEb NR_166446.1 DRR091695, DRR091697, SRR13142118, SRR13142119, SRR15198223, SRR15198227, SRR15198228, SRR9080666, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178988, SRR9178991 chr4 124591264 124591313 + Predicted SINE|Alu|B1_Mm ENSMUSG00000032643.13, Fhl3 ENCFF196PBF, ENCFF312CZB, ENCFF352VWM, ENCFF379JPQ, ENCFF581WWO, ENCFF727WWV, ENCFF913CFN, ENCFF002ZAX, ENCFF009AVK, ENCFF022ACG, ENCFF024CUG, ENCFF039DES, ENCFF077CYB, ENCFF106GHS, ENCFF111MWQ, ENCFF134PXJ, ENCFF141YUD, ENCFF166UTY, ENCFF174EGP, ENCFF209RRO, ENCFF223SMG, ENCFF237HDL, ENCFF242MZE, ENCFF247VEN, ENCFF260UQJ, ENCFF296ITI, ENCFF297PPT, ENCFF308WGP, ENCFF310WDZ, ENCFF403RPK, ENCFF417INY, ENCFF420REU, ENCFF420RGI, ENCFF433QNW, ENCFF437QAE, ENCFF464KYQ, ENCFF524PAV, ENCFF552LXG, ENCFF559QXN, ENCFF584ZUK, ENCFF591WVP, ENCFF651HEM, ENCFF655KBW, ENCFF673BPE, ENCFF698WQO, ENCFF700IPC, ENCFF758IOS, ENCFF765AQX, ENCFF791AUB, ENCFF812QQI, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF847IGW, ENCFF859MTL, ENCFF875BUD, ENCFF896XAZ, ENCFF917KUH, ENCFF936DQW, ENCFF936LNA, ENCFF984QED chr4 124608042 124608043 + Predicted SINE|B2|B2_Mm1t ENSMUSG00000028902.5, Sf3a3 ENCFF560YXX, ENCFF671ERF, ENCFF047LTH, ENCFF089SWU, ENCFF136TYP, ENCFF141YUD, ENCFF143RTP, ENCFF240OIM, ENCFF260UQJ, ENCFF275TCB, ENCFF417INY, ENCFF437ZSM, ENCFF484PQK, ENCFF581ZWM, ENCFF640RWH, ENCFF651HEM, ENCFF814PHK, ENCFF847IGW, ENCFF854LJN, ENCFF881DTW chr4 124823944 124823945 - Predicted LTR|ERVL|MER21C ENSMUSG00000028873.17, Cdca8 SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178985, SRR9178986, SRR9178990 chr4 125917084 125917085 + Predicted LTR|ERVL|MT2A ENSMUSG00000028859.15, Csf3r ENCFF027BYX, ENCFF064PBF, ENCFF120DEX, ENCFF160HKC, ENCFF168WHQ, ENCFF192NVI, ENCFF206EGD, ENCFF234MZC, ENCFF334RGJ, ENCFF367BBB, ENCFF385MVU, ENCFF401HCS, ENCFF533CLY, ENCFF544BEF, ENCFF605IFN, ENCFF606EDP, ENCFF784LWT, ENCFF794FBC, ENCFF907HVO, ENCFF002SZY, ENCFF028XDY, ENCFF082OML, ENCFF085RPW, ENCFF098AYQ, ENCFF155GUC, ENCFF166UTY, ENCFF261EQP, ENCFF366IEQ, ENCFF498OHV, ENCFF531JWM, ENCFF549IDH, ENCFF558UDY, ENCFF612KDP, ENCFF635XED, ENCFF673GRZ, ENCFF753HNF, ENCFF814TTQ, ENCFF817NCH, ENCFF863ENS, ENCFF903KDM, ENCFF951PCM chr4 125917158 125917159 + Predicted LTR|ERVL|MT2A ENSMUSG00000028859.15, Csf3r ENCFF027BYX, ENCFF043JGD, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF075MGH, ENCFF084PUC, ENCFF102AMK, ENCFF104LLO, ENCFF107XGE, ENCFF115KZV, ENCFF116MYR, ENCFF120DEX, ENCFF121BYS, ENCFF125HRQ, ENCFF126HTW, ENCFF133PEB, ENCFF139MHN, ENCFF140VGY, ENCFF147GLI, ENCFF160HKC, ENCFF162UVS, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF206EGD, ENCFF210BCB, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF234MZC, ENCFF262URV, ENCFF264DCN, ENCFF283XKV, ENCFF284OMO, ENCFF297CWJ, ENCFF307VAF, ENCFF308LTO, ENCFF326TQL, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF363CYZ, ENCFF367BBB, ENCFF372GOY, ENCFF376MQF, ENCFF381JXP, ENCFF385MVU, ENCFF393YET, ENCFF401HCS, ENCFF420RFN, ENCFF421SNO, ENCFF439OFV, ENCFF443PSO, ENCFF478FDA, ENCFF480BVV, ENCFF495SQR, ENCFF495YGN, ENCFF504ULZ, ENCFF524EDD, ENCFF527VIY, ENCFF554PUC, ENCFF564YPB, ENCFF570GTP, ENCFF590NVM, ENCFF593RAV, ENCFF606EDP, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF643VPC, ENCFF654BXL, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF723KAG, ENCFF723QIC, ENCFF734FHF, ENCFF743QXJ, ENCFF761RKP, ENCFF775BPV, ENCFF784LWT, ENCFF793STU, ENCFF794FBC, ENCFF802GAN, ENCFF828WIK, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF880FYC, ENCFF884TJE, ENCFF888HEF, ENCFF896MQK, ENCFF907HVO, ENCFF912RLS, ENCFF914BRK, ENCFF915FID, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF970JWC, ENCFF972IVS, ENCFF989HJD, ENCFF993QUE, ENCFF013CHH, ENCFF002SZY, ENCFF012KPC, ENCFF015JJB, ENCFF027GCQ, ENCFF028XDY, ENCFF033DWC, ENCFF041PJP, ENCFF046HWP, ENCFF053NFR, ENCFF054EOL, ENCFF056UGH, ENCFF057MDU, ENCFF061WTN, ENCFF073RJJ, ENCFF082BJV, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087XKQ, ENCFF098AYQ, ENCFF106RLX, ENCFF118YHP, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133PKQ, ENCFF134PXJ, ENCFF141YUD, ENCFF144EDQ, ENCFF155GUC, ENCFF158HQO, ENCFF163BDT, ENCFF163DKN, ENCFF170KWW, ENCFF175LCC, ENCFF178ZXW, ENCFF187BHR, ENCFF189JVE, ENCFF192XJA, ENCFF199AAD, ENCFF210BVU, ENCFF222MKT, ENCFF235HER, ENCFF254VIN, ENCFF258WLS, ENCFF261EQP, ENCFF267VBU, ENCFF268ZHE, ENCFF275HRX, ENCFF279EVY, ENCFF280LCC, ENCFF306OWL, ENCFF313IFI, ENCFF316EEH, ENCFF344VGL, ENCFF346HDC, ENCFF350PHR, ENCFF352KGC, ENCFF357AGP, ENCFF369VAI, ENCFF377OQI, ENCFF387BVS, ENCFF390AUP, ENCFF397ZQU, ENCFF407JTK, ENCFF421DHQ, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF430ERW, ENCFF437QAE, ENCFF454DOT, ENCFF456GLS, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478MHH, ENCFF482VRF, ENCFF490ULA, ENCFF498OHV, ENCFF505PJK, ENCFF518TUP, ENCFF524FJG, ENCFF538AIM, ENCFF543PXT, ENCFF548JDU, ENCFF557JPW, ENCFF565CON, ENCFF566HCI, ENCFF572SQL, ENCFF578MOR, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF609WDV, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF635XED, ENCFF644GYU, ENCFF651HEM, ENCFF655CUI, ENCFF672WYO, ENCFF673GRZ, ENCFF687GPO, ENCFF689RQK, ENCFF689UNV, ENCFF695XIY, ENCFF696VQM, ENCFF698WQO, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF727JTZ, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF751QWY, ENCFF753HNF, ENCFF754VQW, ENCFF765UBL, ENCFF782CNW, ENCFF791ZDR, ENCFF796TQV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812QQI, ENCFF814TTQ, ENCFF834TQY, ENCFF845NUY, ENCFF855UFX, ENCFF860SGX, ENCFF864DTX, ENCFF871CMC, ENCFF877SON, ENCFF877VSZ, ENCFF898CAY, ENCFF901KUE, ENCFF921PGH, ENCFF926FRX, ENCFF946LMX, ENCFF953FGT, ENCFF953WBM, ENCFF956ZKG, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF994PPZ, ENCFF998BIQ chr4 125917218 125917309 + Predicted LTR|ERVL|MT2A ENSMUSG00000028859.15, Csf3r ENCFF027BYX, ENCFF043JGD, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF075MGH, ENCFF083BIG, ENCFF084PUC, ENCFF086ZMV, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF102BWR, ENCFF104LLO, ENCFF106RGV, ENCFF107XGE, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF130KZZ, ENCFF133PEB, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF147GLI, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF198NQV, ENCFF205GJI, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF234MZC, ENCFF251TMY, ENCFF262URV, ENCFF264DCN, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF291LRG, ENCFF297CWJ, ENCFF307VAF, ENCFF308LTO, ENCFF326TQL, ENCFF331WKS, ENCFF332ZPO, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF347UAC, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF439OFV, ENCFF443PSO, ENCFF449MIK, ENCFF450WAV, ENCFF460NGS, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF489VZI, ENCFF495SQR, ENCFF495YGN, ENCFF504ULZ, ENCFF519IZA, ENCFF524EDD, ENCFF527VIY, ENCFF533JUU, ENCFF534DID, ENCFF540XSD, ENCFF552NWL, ENCFF554PUC, ENCFF564OKH, ENCFF564YPB, ENCFF570GTP, ENCFF585YYC, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF600AGS, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF643VPC, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF698LQF, ENCFF707QJV, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF773VFS, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF784LWT, ENCFF793CWJ, ENCFF793STU, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF844QDN, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF876MJS, ENCFF880FYC, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF896MQK, ENCFF912RLS, ENCFF914BRK, ENCFF915FID, ENCFF924VRI, ENCFF931DDH, ENCFF931PFF, ENCFF934ULS, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF951MOU, ENCFF951UXE, ENCFF970JWC, ENCFF972IVS, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF013CHH, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF455DHP, ENCFF572TOH, ENCFF595WXV, ENCFF609ZVL, ENCFF970VKB, ENCFF002SZY, ENCFF006JHA, ENCFF012KPC, ENCFF015JJB, ENCFF016CHX, ENCFF022ACG, ENCFF027GCQ, ENCFF033DWC, ENCFF041PJP, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF052RNG, ENCFF053NFR, ENCFF054EOL, ENCFF056UGH, ENCFF057MDU, ENCFF061WTN, ENCFF065ZIE, ENCFF073RJJ, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087XKQ, ENCFF094RHV, ENCFF106RLX, ENCFF116QKZ, ENCFF118YHP, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF136TYP, ENCFF141YUD, ENCFF144EDQ, ENCFF148BPZ, ENCFF149BQJ, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163BDT, ENCFF163DKN, ENCFF170KWW, ENCFF175LCC, ENCFF177LXI, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF199AAD, ENCFF203EWG, ENCFF210BVU, ENCFF222MKT, ENCFF233RGQ, ENCFF235HER, ENCFF239RQP, ENCFF254VIN, ENCFF257EYD, ENCFF258WLS, ENCFF264PYB, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF275HRX, ENCFF277JGD, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF291SCS, ENCFF297PPT, ENCFF299ENO, ENCFF302MXO, ENCFF306FQJ, ENCFF306OWL, ENCFF308WGP, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF344VGL, ENCFF346HDC, ENCFF347EUO, ENCFF350PHR, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF359DNK, ENCFF363PDR, ENCFF369VAI, ENCFF377OQI, ENCFF378TYU, ENCFF387BVS, ENCFF390AUP, ENCFF397ZQU, ENCFF399TOF, ENCFF406LFV, ENCFF407JTK, ENCFF417INY, ENCFF417OEG, ENCFF421DHQ, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF430ERW, ENCFF437QAE, ENCFF454DOT, ENCFF456GLS, ENCFF458EUS, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478MHH, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF490ULA, ENCFF492HRC, ENCFF497KLL, ENCFF505PJK, ENCFF505WKA, ENCFF517EJZ, ENCFF518TUP, ENCFF524FJG, ENCFF527XBQ, ENCFF530DUT, ENCFF536ZVF, ENCFF537DSI, ENCFF538AIM, ENCFF538ZTW, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF557JPW, ENCFF559QXN, ENCFF565CON, ENCFF566HCI, ENCFF572SQL, ENCFF576EOD, ENCFF578MOR, ENCFF581RIR, ENCFF584ZUK, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF598BFX, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF611OFH, ENCFF611QZE, ENCFF613SEJ, ENCFF614WCH, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF633QXI, ENCFF635XED, ENCFF637GVH, ENCFF643SBQ, ENCFF644GYU, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF661TOM, ENCFF669PMR, ENCFF672WYO, ENCFF680WIN, ENCFF683WFA, ENCFF687GPO, ENCFF689RQK, ENCFF689UNV, ENCFF693POR, ENCFF695XIY, ENCFF696VQM, ENCFF698WQO, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF743NNG, ENCFF747VYT, ENCFF751QWY, ENCFF753HNF, ENCFF754VQW, ENCFF755REI, ENCFF759WDO, ENCFF765UBL, ENCFF772QLP, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF791ZDR, ENCFF796TQV, ENCFF801SNQ, ENCFF804EWD, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812QQI, ENCFF830CBI, ENCFF834TQY, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF855UFX, ENCFF858OFI, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF877SON, ENCFF877VSZ, ENCFF885ZAO, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF901KUE, ENCFF907KCF, ENCFF921PGH, ENCFF926FRX, ENCFF932XKS, ENCFF946LMX, ENCFF949QCF, ENCFF953FGT, ENCFF953WBM, ENCFF956ZKG, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF970LRH, ENCFF970WCD, ENCFF971DTR, ENCFF983GRF, ENCFF994PPZ, ENCFF998BIQ, ENCFF999ZYF, ENCFF178HDG, ENCFF477YHR chr4 126161891 126161892 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000028847.9, Trappc3 ENCFF581WWO, ENCFF024CUG, ENCFF065UBR, ENCFF443URE, ENCFF908MGO chr4 126503107 126503108 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000073755.5, 5730409E04Rik ENCFF002FAE, ENCFF089PFT, ENCFF005GQR, ENCFF377UGQ, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF478KOR, ENCFF587VDB, ENCFF632LPV, ENCFF636NES, ENCFF721BNO, ENCFF725ATS, ENCFF733MXU, ENCFF854MWX, ENCFF967NOO, ENCFF008XVO, ENCFF119IHT, ENCFF499CDP, ENCFF749STK, ENCFF932SOZ, ENCFF970VKL chr4 127891598 127891604 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000028804.21, Csmd2 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr4 128020081 128020082 + Predicted SINE|MIR|MIRc ENSMUSG00000028804.21, Csmd2 SRR2089636, SRR2089640, SRR2089647, SRR2089649 chr4 128829281 128829282 - Predicted SINE|Alu|B1_Mur4 ENSMUSG00000028789.17, Azin2 SRR9178977, SRR9178978, SRR9178983, SRR9178984, SRR9178989 chr4 128891137 128891138 - Predicted SINE|B4|B4 ENSMUSG00000120256.1, ENSMUSG00000120256 SRR2089635, SRR2089636, SRR2089638, SRR2089640, SRR2089647, SRR2089650, SRR2089651 chr4 129074266 129074267 - Predicted SINE|Alu|B1_Mur4 ENSMUSG00000040928.16, S100pbp ENCFF092YWY, ENCFF160HKC, ENCFF287KDR, ENCFF345BBC, ENCFF567AFB, ENCFF019PWU, ENCFF068KDU, ENCFF108JLQ, ENCFF228CMT, ENCFF239RQP, ENCFF292KWK, ENCFF386HCR, ENCFF450CUC, ENCFF479WHZ, ENCFF486GBM, ENCFF548HOL, ENCFF549IDH, ENCFF572JDP, ENCFF611QZE, ENCFF759HJA, ENCFF907KCF, ENCFF951GZB, ENCFF974KKD chr4 129276486 129276541 + Annotated LTR|ERVL|RMER15 ENSMUSG00000120913.1, ENSMUSG00000120913 ENSMUST00000246763.1, ENSMUST00000246458.1, ENSMUST00000247238.1, NR_151530.1 ENCFF002EZU, ENCFF002EZW, ENCFF002FAE, ENCFF002FAG, DRR091696, SRR11428468 chr4 129340760 129340765 - Annotated LTR|ERV1|RLTR1C ENSMUSG00000120090.1, ENSMUSG00000120090 ENSMUST00000241307.1, ENSMUST00000245158.1, ENSMUST00000243186.1 SRR13142123, SRR15198221, SRR2927111 chr4 129418360 129418361 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000028800.16, Hdac1 ENCFF002DMZ, ENCFF002ERU, ENCFF002EZW, ENCFF198RBJ, ENCFF043DTH, ENCFF108JLQ, ENCFF483SQS, ENCFF687GPO, ENCFF764AQK chr4 129494985 129494986 + Annotated SINE|MIR|MIRb ENSMUSG00000028797.21, Tmem234 ENSMUST00000144304.2 ENCFF923VUD, ENCFF772QLP chr4 129566754 129566761 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000003731.14, Kpna6 ENCFF002EZU, ENCFF002EZW, ENCFF027IIP, ENCFF121OLG, ENCFF125HRQ, ENCFF138QRF, ENCFF212ZXS, ENCFF264DCN, ENCFF297CWJ, ENCFF308LTO, ENCFF415KCJ, ENCFF564OKH, ENCFF565YHF, ENCFF581WWO, ENCFF606EDP, ENCFF794FBC, ENCFF937GBW, ENCFF005GQR, ENCFF027RRZ, ENCFF065LOT, ENCFF067UCQ, ENCFF084CWD, ENCFF148XRK, ENCFF156YWS, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF270ERO, ENCFF271OHB, ENCFF330FNX, ENCFF348FTH, ENCFF369YLA, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF500QZK, ENCFF572TOH, ENCFF632LPV, ENCFF647TTU, ENCFF721BNO, ENCFF725ATS, ENCFF744OEI, ENCFF747XPP, ENCFF775SSI, ENCFF804UQS, ENCFF818BAS, ENCFF831ISX, ENCFF854MWX, ENCFF860XMD, ENCFF914YDJ, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF003GJV, ENCFF037GFB, ENCFF070YMI, ENCFF103SQR, ENCFF116QKZ, ENCFF131VEF, ENCFF149BQJ, ENCFF156XMZ, ENCFF178ZXW, ENCFF205CDI, ENCFF243TPB, ENCFF275HRX, ENCFF390AUP, ENCFF487OHM, ENCFF497GLK, ENCFF614WCH, ENCFF687STH, ENCFF769FVU, ENCFF843WRN, ENCFF858OFI, ENCFF860SGX, ENCFF886UAF, ENCFF949QCF, ENCFF953FGT, ENCFF119IHT, ENCFF269AST, ENCFF361MLD, ENCFF423TSB, ENCFF499CDP, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF932SOZ, SRR11428467, SRR15198217, SRR15198219, SRR15198224, SRR9080665 chr4 130116087 130116088 - Annotated LTR|ERVK|RLTR26_Mus NM_001034872.2 ENCFF002EZW chr4 130116193 130116194 - Annotated LTR|ERVK|RLTR26_Mus ENSMUSG00000023120.10, Ldc1 ENSMUST00000023884.7 ENCFF002EZW chr4 131576129 131576130 + Predicted SINE|MIR|MIRb ENSMUSG00000028910.13, Mecr ENCFF002DND, ENCFF002EZY, SRR15198221, SRR15198224, SRR15198228, SRR2040601, SRR9178978, SRR9178990 chr4 133080671 133080673 - Predicted SINE|Alu|B1F1 ENSMUSG00000037622.15, Wdtc1 ENCFF027BYX, ENCFF051JSS, ENCFF084PUC, ENCFF091WMS, ENCFF116MYR, ENCFF178PMH, ENCFF205GJI, ENCFF264DCN, ENCFF344LNZ, ENCFF392TDB, ENCFF393YET, ENCFF478FDA, ENCFF480BVV, ENCFF521UGJ, ENCFF522VLI, ENCFF533JUU, ENCFF625JLB, ENCFF775BPV, ENCFF851ESH, ENCFF912RLS, ENCFF934ZAP, ENCFF985BLV, ENCFF009AON, ENCFF080REY, ENCFF083IRL, ENCFF128CYW, ENCFF155GUC, ENCFF172DMS, ENCFF199AAD, ENCFF205CDI, ENCFF249LSC, ENCFF296UDD, ENCFF306OWL, ENCFF316EEH, ENCFF320CXH, ENCFF328TJH, ENCFF344VGL, ENCFF346HDC, ENCFF380LXU, ENCFF390AUP, ENCFF426ETE, ENCFF497GLK, ENCFF505WKA, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF594GIP, ENCFF655CUI, ENCFF673GRZ, ENCFF723QWN, ENCFF741PLM, ENCFF811ZQO, ENCFF855UFX, ENCFF863LMG, ENCFF867FTP, ENCFF871CMC, ENCFF872SFD, ENCFF906CJJ, ENCFF927LFD, ENCFF999ZYF, DRR091688, DRR091694 chr4 133080763 133080862 - Annotated SINE|Alu|B1F1 ENSMUSG00000037622.15, Wdtc1 ENSMUST00000140976.2 ENCFF001NDA, ENCFF001NDD, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF104LLO, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF125HRQ, ENCFF139MHN, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF210BCB, ENCFF214IUN, ENCFF225MMR, ENCFF262URV, ENCFF264DCN, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF363CYZ, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF420RFN, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF521IDK, ENCFF521UGJ, ENCFF522VLI, ENCFF527VIY, ENCFF533CLY, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF595GFM, ENCFF623BKO, ENCFF625JLB, ENCFF670CXH, ENCFF683RFI, ENCFF696TCH, ENCFF711WAC, ENCFF743QXJ, ENCFF761RKP, ENCFF775BPV, ENCFF782JNB, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF828WIK, ENCFF841OXD, ENCFF851ESH, ENCFF865WQE, ENCFF878SQO, ENCFF880FYC, ENCFF896IIZ, ENCFF912RLS, ENCFF922KQY, ENCFF931PFF, ENCFF934ZAP, ENCFF937GBW, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF345BBC, ENCFF002SZY, ENCFF009AON, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF033DWC, ENCFF037GFB, ENCFF049SEE, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF065ZIE, ENCFF070YMI, ENCFF073RJJ, ENCFF080REY, ENCFF083IRL, ENCFF085RPW, ENCFF088SVK, ENCFF094RHV, ENCFF103SQR, ENCFF118YHP, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF150HVU, ENCFF155GUC, ENCFF156XMZ, ENCFF163BDT, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF235HER, ENCFF243TPB, ENCFF249LSC, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF278JAU, ENCFF279EVY, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF306OWL, ENCFF313IFI, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF328TJH, ENCFF332IRR, ENCFF338LFG, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF357QTB, ENCFF369VAI, ENCFF380BYT, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF406NLL, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF426ETE, ENCFF429TQT, ENCFF430ERW, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF505YPK, ENCFF512XKX, ENCFF517EJZ, ENCFF536ZVF, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF578PSU, ENCFF584OOK, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF637PIP, ENCFF644GYU, ENCFF655CUI, ENCFF673GRZ, ENCFF689RQK, ENCFF689UNV, ENCFF698WQO, ENCFF707HQI, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF737VKP, ENCFF741PLM, ENCFF743NNG, ENCFF751QWY, ENCFF766UJI, ENCFF769FVU, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF818ZJQ, ENCFF834TQY, ENCFF838BEV, ENCFF855UFX, ENCFF860SGX, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877VSZ, ENCFF886UAF, ENCFF900AIQ, ENCFF906CJJ, ENCFF921PGH, ENCFF926FRX, ENCFF938XTE, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF983GRF, ENCFF986DZE, ENCFF994PPZ, ENCFF999ZYF, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697198, SRR10697199, SRR10697201, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR3178204, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178990, SRR9178992 chr4 133377464 133377465 - Annotated LTR|ERVL|LTR50 ENSMUSG00000037553.15, Zdhhc18 ENSMUST00000146464.2 chr4 133414981 133414982 - Predicted DNA|TcMar-Tigger|Tigger20a ENSMUSG00000007880.17, Arid1a ENCFF002FAC, ENCFF089WMB, ENCFF334XFS, SRR3178203 chr4 133707920 133707921 - Annotated SINE|Alu|B1_Mur1 ENSMUSG00000012117.14, Dhdds ENSMUST00000134096.2 chr4 135735853 135735854 + Predicted SINE|B2|B2_Mm1t ENSMUSG00000085714.2, Gm13008 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr4 135981058 135981059 + Predicted LINE|CR1|L3 ENSMUSG00000001604.15, Tcea3 ENCFF737OUQ, SRR15198227, SRR6904683 chr4 137180573 137180608 + Annotated LINE|CR1|Plat_L3 ENSMUSG00000041399.4, 1700013G24Rik ENSMUST00000048893.4, NM_027063.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR6338004, SRR6904683, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 138590759 138590805 - Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000041193.16, Pla2g5 ENSMUST00000102513.8, ENSMUST00000030524.14, ENSMUST00000140100.2, NM_001122954.1 ENCFF001NCR, ENCFF001NDA, ENCFF089PFT, ENCFF140VGY, ENCFF262URV, ENCFF489IGD, ENCFF521IDK, ENCFF696TCH, ENCFF874ELO, ENCFF280LCC, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 139637799 139637800 + Annotated DNA|TcMar-Tigger|Tigger19b ENSMUSG00000087646.2, Gm1667 ENSMUST00000151651.2 chr4 139670994 139670995 - Predicted DNA|TcMar-Tigger|MamRep434 ENSMUSG00000085928.2, 4933427I22Rik DRR091693, DRR091699, SRR15198225, SRR15198228, SRR2040601, SRR9178978, SRR9178980, SRR9178983, SRR9178989, SRR9178990 chr4 140427702 140427853 + Annotated SINE|B4|ID_B1 ENSMUSG00000040945.14, Rcc2 ENSMUST00000071169.9 ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF002DNB, ENCFF002ERW, ENCFF027BYX, ENCFF056GXQ, ENCFF059IQN, ENCFF091WMS, ENCFF106RGV, ENCFF121OLG, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF178ZVU, ENCFF179WPT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF207OVG, ENCFF214IUN, ENCFF218HNK, ENCFF225MMR, ENCFF251TMY, ENCFF262URV, ENCFF289WHW, ENCFF326TQL, ENCFF331WKS, ENCFF345OIF, ENCFF352VWM, ENCFF371VGE, ENCFF381JXP, ENCFF390QUP, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF478FDA, ENCFF482MUH, ENCFF527VIY, ENCFF564YPB, ENCFF589REP, ENCFF625JLB, ENCFF641QXI, ENCFF670CXH, ENCFF711WAC, ENCFF734FHF, ENCFF761RKP, ENCFF775BPV, ENCFF782JNB, ENCFF802GAN, ENCFF828WIK, ENCFF849GVQ, ENCFF852ZDB, ENCFF896IIZ, ENCFF915FID, ENCFF922KQY, ENCFF935XRF, ENCFF937GBW, ENCFF951MOU, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF002SZY, ENCFF014CMK, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF065ZIE, ENCFF073RJJ, ENCFF083IRL, ENCFF087IUJ, ENCFF116QKZ, ENCFF118YHP, ENCFF131VEF, ENCFF156XMZ, ENCFF157IFW, ENCFF178ZXW, ENCFF189BIW, ENCFF199AAD, ENCFF235HER, ENCFF258WLS, ENCFF279EVY, ENCFF299ENO, ENCFF321NRW, ENCFF332IRR, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF357QTB, ENCFF369VAI, ENCFF378TYU, ENCFF387BVS, ENCFF417OEG, ENCFF483KXD, ENCFF490ULA, ENCFF492HRC, ENCFF505PJK, ENCFF505WKA, ENCFF548JDU, ENCFF552KEA, ENCFF576EOD, ENCFF594GIP, ENCFF596INO, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF633QXI, ENCFF644GYU, ENCFF693POR, ENCFF698WQO, ENCFF707HQI, ENCFF712BKP, ENCFF727JTZ, ENCFF737VKP, ENCFF747VYT, ENCFF809QBQ, ENCFF811ZQO, ENCFF860SGX, ENCFF877VSZ, ENCFF926FRX, ENCFF932XKS, ENCFF994PPZ, SRR15198217, SRR15198225, SRR15198227 chr4 140816260 140816261 + Predicted SINE|MIR|MIRb ENSMUSG00000045004.4, Spata21 SRR5643201, SRR6904683, SRR6904684, SRR6904685 chr4 141208125 141208126 - Predicted SINE|B4|B4A ENSMUSG00000040761.17, Spen ENCFF002DMZ, ENCFF002DNB, ENCFF051JSS, ENCFF855FCX, ENCFF862FYE, ENCFF497GLK, ENCFF160TQC, ENCFF906OAF, SRR9080663 chr4 14291308 14291353 - Annotated LTR|ERVK|RLTR16B_MM NR_131155.1 DRR091688, DRR091690, DRR091692, DRR091693, DRR091695, DRR091696, DRR091698, SRR10697199, SRR13142120, SRR15198219, SRR15198225, SRR2927111, SRR2927112, SRR2927113 chr4 144077564 144077565 - Predicted LINE|L1|L1MdF_V ENSMUSG00000084312.2, Gm13122 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr4 144130316 144130317 + Annotated LTR|ERVK|RMER17C ENSMUSG00000121128.1, ENSMUSG00000121128 ENSMUST00000247229.1 chr4 145489809 145489826 + Predicted LTR|ERV1|RMER5 ENSMUSG00000063245.12, ENSMUSG00000066007.16, ENSMUSG00000087513.2, Zfp993, Zfp600, Gm13236 DRR091690, DRR091692, DRR091695, DRR091697, SRR10697195, SRR10697196, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR5643199, SRR6904683, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr4 146188284 146188293 - Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000086654.2, Gm13165 DRR091689, DRR091693, DRR091699, SRR10697202, SRR13142122, SRR15198218, SRR15198222, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927112 chr4 146188709 146188730 + Predicted LTR|ERV1|RMER5 ENSMUSG00000063245.12, ENSMUSG00000066007.16, ENSMUSG00000085525.8, Zfp993, Zfp600, Gm13166 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091696, DRR091697, DRR091699, SRR11428467, SRR11428468, SRR11428470, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178989, SRR9178991 chr4 147198318 147198326 - Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000045699.6, ENSMUSG00000094017.2, Gm21411, Gm13160 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697200, SRR11428467, SRR11428468, SRR13142121, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR2927113, SRR6904683, SRR6904685, SRR9080664, SRR9080665, SRR9178978, SRR9178981 chr4 147198722 147198763 + Predicted LTR|ERV1|RMER5 ENSMUSG00000067916.10, Zfp991 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR3178205, SRR5643192, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr4 147913512 147913521 - Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000059423.14, Zfp933 ENCFF002FAI, ENCFF040EEJ, ENCFF083CUR, ENCFF092YWY, ENCFF138TOM, ENCFF321BMO, ENCFF330IYN, ENCFF352VWM, ENCFF489VZI, ENCFF494YXM, ENCFF560YXX, ENCFF570GTP, ENCFF621PKT, ENCFF622NXP, ENCFF643VPC, ENCFF647ICR, ENCFF755IDE, ENCFF771LLL, ENCFF858CRT, ENCFF868XLZ, ENCFF896MQK, ENCFF917RNE, ENCFF970JWC, ENCFF994BOT, ENCFF012HVN, ENCFF013SNI, ENCFF047LTH, ENCFF077CYB, ENCFF167GWU, ENCFF194DAO, ENCFF209LBA, ENCFF286GUQ, ENCFF297PPT, ENCFF397ZQU, ENCFF486BJT, ENCFF505YPK, ENCFF613YNK, ENCFF618PVF, ENCFF643SBQ, ENCFF669PMR, ENCFF687STH, ENCFF695XIY, ENCFF699SBZ, ENCFF754VQW, ENCFF758IOS, ENCFF829WND, ENCFF853PNO, ENCFF916JWW, ENCFF934QGX, ENCFF953FGT, ENCFF955WXI, ENCFF958LRX chr4 147924153 147924172 - Predicted LTR|ERVK|IAPEz-int ENSMUSG00000059423.14, Zfp933 ENCFF001RTF, ENCFF001RTJ, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF148XRK, ENCFF222GPK, ENCFF269SRJ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF296VFB, ENCFF348FTH, ENCFF369YLA, ENCFF377UGQ, ENCFF385UBP, ENCFF390NKP, ENCFF444YCN, ENCFF454ZUS, ENCFF484HRX, ENCFF487DYP, ENCFF532UKS, ENCFF587VDB, ENCFF592GVA, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF657FNE, ENCFF667SYQ, ENCFF670FEL, ENCFF694NRG, ENCFF725ATS, ENCFF766LGO, ENCFF775SSI, ENCFF804UQS, ENCFF831ISX, ENCFF834VIK, ENCFF923VUD, ENCFF933KQV, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF014SLC, ENCFF178HDG, ENCFF199IWW, ENCFF248ELC, ENCFF260KJY, ENCFF269AST, ENCFF342GAL, ENCFF477YHR, ENCFF494ZWE, ENCFF510IAG, ENCFF574YMK, ENCFF582WGH, ENCFF671TUD, ENCFF847LGC, ENCFF904RJF chr4 148236766 148236767 - Predicted SINE|Alu|B1_Mur3 ENSMUSG00000055401.15, Fbxo6 ENCFF089PFT, ENCFF102BWR, ENCFF178ZVU, ENCFF225MMR, ENCFF755FCM, ENCFF922KQY, ENCFF033ZUH, ENCFF236TUH, ENCFF251WZA, ENCFF269WEZ, ENCFF588DUN, ENCFF643XFK, ENCFF808PVJ, ENCFF826RUZ, ENCFF964WZW, ENCFF046HWP, ENCFF120SMK, ENCFF258WLS, ENCFF268ZHE, ENCFF357QTB, ENCFF424GQM, ENCFF747VYT, ENCFF994PPZ, ENCFF160TQC, ENCFF277QHC, DRR091688, DRR091697, SRR10697202, SRR11428470, SRR9178983, SRR9178986, SRR9178989 chr4 148610182 148610183 + Predicted LINE|L2|X24_LINE ENSMUSG00000028991.16, Mtor ENCFF002DND, ENCFF002EZW, ENCFF002FAC, ENCFF381JXP, ENCFF704GEB, ENCFF197OUM, ENCFF726YTS, ENCFF830CBI, ENCFF871CMC, ENCFF998BIQ chr4 148642622 148642623 + Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000017264.17, Exosc10 ENCFF906FNQ, DRR091689, DRR091695, DRR091698, SRR10697198, SRR10697199, SRR10697200, SRR15198217, SRR9080665, SRR9178982 chr4 14929851 14929865 + Annotated LTR|ERVL-MaLR|MTEa ENSMUSG00000086587.9, Gm11837 ENSMUST00000137532.9 ENCFF002EZU, ENCFF002FAE, ENCFF002FAG, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR13142119, SRR13142120, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198227, SRR2040601, SRR3178205, SRR3178206, SRR5643190, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178982, SRR9178983, SRR9178989, SRR9178992 chr4 149786031 149786228 - Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000039936.19, Pik3cd ENSMUST00000122059.8, ENSMUST00000124510.2, NM_001029837.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002ERU, ENCFF002EZY, ENCFF005NBP, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF064PBF, ENCFF082HKQ, ENCFF083BIG, ENCFF084PUC, ENCFF086ZMV, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102BWR, ENCFF104LLO, ENCFF106RGV, ENCFF107XGE, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF151QHP, ENCFF159OVE, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF196PBF, ENCFF198NQV, ENCFF205GJI, ENCFF207DLW, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF265LKR, ENCFF283XKV, ENCFF284OMO, ENCFF287KDR, ENCFF291LRG, ENCFF295SYY, ENCFF296ASE, ENCFF297CWJ, ENCFF307VAF, ENCFF310HPH, ENCFF312CZB, ENCFF313ERY, ENCFF321BMO, ENCFF326TQL, ENCFF331WKS, ENCFF332ZPO, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF351JWR, ENCFF363CYZ, ENCFF363XWU, ENCFF367BBB, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF439OFV, ENCFF443PSO, ENCFF449MIK, ENCFF450WAV, ENCFF460NGS, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521UGJ, ENCFF524EDD, ENCFF527VIY, ENCFF528CBF, ENCFF533JUU, ENCFF534DID, ENCFF535YBP, ENCFF540XSD, ENCFF548SLN, ENCFF552NWL, ENCFF554PUC, ENCFF564OKH, ENCFF564YPB, ENCFF570GTP, ENCFF581WWO, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF606EDP, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF670CXH, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF698LQF, ENCFF707QJV, ENCFF711WAC, ENCFF723KAG, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF771LLL, ENCFF771YNG, ENCFF775BPV, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF793STU, ENCFF794FBC, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844KCR, ENCFF844QDN, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF865WQE, ENCFF868XLZ, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896MQK, ENCFF906FNQ, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF922KQY, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970XZM, ENCFF972IVS, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF274ESJ, ENCFF345BBC, ENCFF455DHP, ENCFF532UKS, ENCFF609ZVL, ENCFF712DGP, ENCFF933KQV, ENCFF935LAF, ENCFF970VKB, ENCFF002SZY, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF009AON, ENCFF012HVN, ENCFF015JJB, ENCFF019PVP, ENCFF022ACG, ENCFF023TPS, ENCFF027GBM, ENCFF027GCQ, ENCFF028XDY, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF039DES, ENCFF045YRV, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF053NFR, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF060FGD, ENCFF061WTN, ENCFF064VAD, ENCFF065ZIE, ENCFF066MTU, ENCFF066UDR, ENCFF067OYG, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF103SQR, ENCFF107YGR, ENCFF116QKZ, ENCFF117ZMM, ENCFF118YHP, ENCFF124SSE, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF142PTA, ENCFF143RTP, ENCFF144EDQ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF155GUC, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163DKN, ENCFF163GEC, ENCFF167EHX, ENCFF167GWU, ENCFF170KWW, ENCFF172DMS, ENCFF178ZXW, ENCFF185TRT, ENCFF186NDY, ENCFF187BHR, ENCFF189BIW, ENCFF198XFF, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF207RVA, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF221ZQB, ENCFF223SMG, ENCFF233RGQ, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF240OIM, ENCFF242MZE, ENCFF243LBQ, ENCFF249LSC, ENCFF254VIN, ENCFF255ESE, ENCFF256UWN, ENCFF258WLS, ENCFF260UQJ, ENCFF267KZS, ENCFF267VBU, ENCFF268ZHE, ENCFF275HRX, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286RSE, ENCFF291SCS, ENCFF292KWK, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF302MXO, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF310WDZ, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF332IRR, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF350KYC, ENCFF350PHR, ENCFF352KGC, ENCFF357AGP, ENCFF357QTB, ENCFF359DNK, ENCFF366IEQ, ENCFF369VAI, ENCFF374VAZ, ENCFF377OQI, ENCFF378TYU, ENCFF380LXU, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF404HLB, ENCFF406LFV, ENCFF407JTK, ENCFF408FFP, ENCFF411KCB, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF422CQE, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF437QAE, ENCFF437ZSM, ENCFF439HXQ, ENCFF443URE, ENCFF458EUS, ENCFF459TYQ, ENCFF460FON, ENCFF468RDR, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF478BEL, ENCFF478MHH, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF498OHV, ENCFF505PJK, ENCFF505WKA, ENCFF507WIK, ENCFF512XKX, ENCFF513BRJ, ENCFF517BAY, ENCFF517EJZ, ENCFF518TUP, ENCFF522KWW, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF541HSQ, ENCFF543GNI, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549IDH, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF557JPW, ENCFF559QXN, ENCFF563FUC, ENCFF565CON, ENCFF566HCI, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF587HBC, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598LJF, ENCFF598WAL, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF633QXI, ENCFF635XED, ENCFF637PIP, ENCFF644EGG, ENCFF644GYU, ENCFF647RUH, ENCFF651HEM, ENCFF655KBW, ENCFF656DRS, ENCFF661TOM, ENCFF661UPO, ENCFF663SPA, ENCFF667RGF, ENCFF672WYO, ENCFF673BPE, ENCFF673GRZ, ENCFF680OWA, ENCFF680WIN, ENCFF683WFA, ENCFF685GDB, ENCFF687GPO, ENCFF691DJE, ENCFF693POR, ENCFF696TTO, ENCFF696VQM, ENCFF698WQO, ENCFF700IPC, ENCFF706BUS, ENCFF707HQI, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF726YTS, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF740WXS, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF754VQW, ENCFF756QJD, ENCFF758BKM, ENCFF758IOS, ENCFF759HJA, ENCFF765UBL, ENCFF766UJI, ENCFF770WIT, ENCFF780UQU, ENCFF781MKK, ENCFF786BUI, ENCFF789AOM, ENCFF791ZDR, ENCFF796TQV, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF817NCH, ENCFF820JMO, ENCFF825JNK, ENCFF829WND, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF843WRN, ENCFF853PNO, ENCFF855UFX, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF883APB, ENCFF886UAF, ENCFF896XAZ, ENCFF898CAY, ENCFF900AIQ, ENCFF903KDM, ENCFF904KCQ, ENCFF908MGO, ENCFF916BSM, ENCFF916JWW, ENCFF921PGH, ENCFF926IDV, ENCFF932XKS, ENCFF934VFW, ENCFF936DQW, ENCFF936LNA, ENCFF938XTE, ENCFF939QLN, ENCFF939UBM, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956RCJ, ENCFF956ZKG, ENCFF958FDX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF974XWJ, ENCFF983GRF, ENCFF994PPZ, ENCFF996AOW, ENCFF998BIQ, ENCFF999ZYF, ENCFF062GNP, ENCFF178HDG, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF349AIG, ENCFF477YHR, ENCFF494ZWE, ENCFF499GDC, ENCFF574YMK, ENCFF582WGH, ENCFF653QJY, ENCFF671TUD chr4 150763204 150763250 - Annotated SINE|B4|RSINE1 ENSMUSG00000085869.2, Gm16079 ENSMUST00000149065.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6904683, SRR6904685, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178982, SRR9178984, SRR9178989, SRR9178990, SRR9178992 chr4 150998662 150998663 - Annotated SINE|Alu|PB1D7 ENSMUSG00000028964.15, Park7 ENSMUST00000146184.3 chr4 151004612 151004648 + Annotated SINE|MIR|MIR3 ENSMUSG00000028965.14, Tnfrsf9 ENSMUST00000105672.10, ENSMUST00000030808.10, NM_001077508.1, NM_011612.2 ENCFF002EZW, ENCFF489IGD chr4 151009763 151009764 + Annotated LINE|L1|L1M4 ENSMUSG00000028965.14, Tnfrsf9 ENSMUST00000105671.8 chr4 152380878 152380879 + Predicted LTR|ERVK|RMER17C2 ENSMUSG00000039662.17, Icmt ENCFF001NEC, ENCFF874ELO, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697203, SRR2040601, SRR2927111, SRR2927113, SRR9178976, SRR9178977, SRR9178981, SRR9178986, SRR9178988, SRR9178990 chr4 153716676 153716677 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000121000.1, ENSMUSG00000121000 ENSMUST00000246820.1 ENCFF001NDD, SRR6338004 chr4 155152281 155152282 + Predicted SINE|MIR|MIR3 ENSMUSG00000029047.14, Pex10 ENCFF001RTF, ENCFF001RTJ, ENCFF002EZU, ENCFF002FAC, ENCFF002FAI, ENCFF420RFN, ENCFF437AJW chr4 155499212 155499234 - Annotated LINE|L1|L1MC5a ENSMUSG00000084803.9, 5830444B04Rik ENSMUST00000152780.2, ENSMUST00000166858.2 chr4 155921579 155921597 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000029070.10, Mxra8 DRR091689, DRR091690, DRR091692, DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR11428467, SRR11428470, SRR13142119, SRR15198217, SRR15198222, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178990, SRR9178991 chr4 156116078 156116120 - Annotated LTR|ERVK|RLTR20B4_MM ENSMUSG00000087381.10, Gm16008 ENSMUST00000181389.3, ENSMUST00000151836.9, ENSMUST00000126009.2, NR_169176.1 ENCFF001NDD, ENCFF001RTD, ENCFF001RTN, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAG, ENCFF002FAI, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF115LWP, ENCFF148XRK, ENCFF199IRM, ENCFF222GPK, ENCFF377LAC, ENCFF408NBX, ENCFF448TTG, ENCFF510LAE, ENCFF510TTU, ENCFF572TOH, ENCFF632LPV, ENCFF636NES, ENCFF694NRG, ENCFF704WWK, ENCFF803VZZ, ENCFF818BAS, ENCFF829RHM, ENCFF912MUD, ENCFF914YDJ, ENCFF242SVY, ENCFF269AST, ENCFF277QHC, ENCFF446LMP, ENCFF749STK, ENCFF847LGC, SRR15198224 chr4 15986510 15986511 + Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000028224.15, Nbn ENCFF002DMZ, ENCFF002DNB, ENCFF048FGD, ENCFF502ANK, ENCFF793IYH, ENCFF080DNG, ENCFF302KQL, ENCFF334XFS, ENCFF557JPW, SRR6904683, SRR6904685 chr4 16218650 16218651 + Predicted LINE|L1|Lx8b ENSMUSG00000085112.3, A530072M11Rik DRR091691, SRR10697198, SRR10697200, SRR11428470, SRR13142118, SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198228, SRR2927111, SRR2927113, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178990, SRR9178991, SRR9178992 chr4 19458482 19458483 + Predicted LINE|L1|Lx6 ENSMUSG00000056494.8, Cngb3 DRR091694, DRR091695, SRR10697197, SRR15198220, SRR2927111 chr4 19687886 19687887 - Predicted LINE|L2|L2c ENSMUSG00000041058.16, Wwp1 ENCFF002DMZ, ENCFF002DND, ENCFF002ERU, ENCFF002EZW, ENCFF002FAI, ENCFF102BWR, ENCFF106GQS, ENCFF192NVI, ENCFF489IGD, ENCFF575RUC, ENCFF993QUE, ENCFF809FPA, ENCFF197OUM, ENCFF565YJQ, ENCFF901KUE, SRR10697195, SRR10697203, SRR2927111, SRR6338004, SRR6904683, SRR6904684, SRR6904685 chr4 23518888 23518917 - Predicted SINE|Alu|PB1D10 ENSMUSG00000082876.2, Gm11889 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR11428467, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198222, SRR15198225, SRR15198228, SRR2927111, SRR2927112, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178984, SRR9178990, SRR9178992 chr4 32799827 32799828 + Predicted SINE|B4|RSINE1 ENSMUSG00000045854.5, Lyrm2 ENCFF001NDA, ENCFF002FAE, ENCFF027IIP, ENCFF426QFT, ENCFF828WIK, ENCFF271OHB, ENCFF500QZK, ENCFF647TTU, ENCFF654AEJ, ENCFF733MXU, ENCFF818BAS, ENCFF854MWX, ENCFF855FCX, ENCFF075EMK, ENCFF119IHT, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF911OIZ, SRR15198219 chr4 34772053 34772054 - Predicted LTR|ERVK|RMER12C ENSMUSG00000028295.15, Smim8 ENCFF426QFT, ENCFF437AJW, ENCFF027GBM, SRR6904683, SRR6904684, SRR6904685 chr4 37249403 37249420 + Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000086026.2, Gm12374 ENSMUST00000147108.2, NR_151605.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 37969673 37969713 + Predicted LTR|ERVL|RMER15 ENSMUSG00000080057.3, Gm12378 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178977, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178988 chr4 38256104 38256105 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000084148.2, Gm12380 DRR091690, DRR091692, DRR091697, SRR15198217, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178978, SRR9178989 chr4 38678433 38678434 - Predicted LINE|L1|L1MdA_III ENSMUSG00000085632.3, Gm12381 ENCFF013CHH, ENCFF712DGP, ENCFF945ICZ, ENCFF671TUD chr4 39259793 39259794 - Annotated LINE|L1|L1_Mur2 ENSMUSG00000065344.2, Gm25581 ENSMUST00000083410.2 chr4 39755658 39755659 + Predicted LINE|L1|L1MdA_I ENSMUSG00000082302.2, Gm12385 SRR2089609, SRR2089612, SRR2089613, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089636, SRR2089637, SRR2089639, SRR2089640, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr4 40472180 40472181 + Annotated LINE|L2|L2 ENSMUSG00000046593.4, Tmem215 ENSMUST00000049655.3, NM_177175.4 chr4 40701928 40701931 - Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000028411.16, Aptx DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697196, SRR10697197, SRR10697199, SRR10697201, SRR10697202, SRR11428468, SRR11428470, SRR13142119, SRR13142120, SRR15198223, SRR15198227, SRR2927113, SRR6338004, SRR9178981, SRR9178982 chr4 4077513 4077522 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000071019.12, Sdr16c6 ENSMUST00000108383.2, NM_001080710.2 chr4 41755169 41755170 + Predicted LINE|L1|Lx8 ENSMUSG00000073889.11, Il11ra1 ENCFF001RTD, ENCFF002FAA, ENCFF002FAG, ENCFF002FAI, ENCFF059IQN, ENCFF052WUB, ENCFF084CWD, ENCFF199IRM, ENCFF284AEN, ENCFF304DLW, ENCFF326UXM, ENCFF355AMN, ENCFF377UGQ, ENCFF467LJD, ENCFF590LNP, ENCFF654AEJ, ENCFF657UWH, ENCFF860XMD, ENCFF920FVY, ENCFF933MOZ, ENCFF088SVK, ENCFF172DMS, ENCFF197NCG, ENCFF199IWW, ENCFF269AST, ENCFF705HQV, ENCFF720MPJ, ENCFF733LFV, ENCFF749STK, ENCFF911OIZ, SRR15198221, SRR15198223 chr4 41755228 41755293 + Annotated LINE|L1|Lx8 ENSMUSG00000036073.19, Galt ENSMUST00000084695.12, ENSMUST00000108038.3, ENSMUST00000135734.8, ENSMUST00000151490.8 ENCFF001RTD, ENCFF002ERW, ENCFF002EZW, ENCFF002FAA, ENCFF002FAC, ENCFF002FAG, ENCFF002FAI, ENCFF059IQN, ENCFF426QFT, ENCFF462ABU, ENCFF052WUB, ENCFF084CWD, ENCFF199IRM, ENCFF284AEN, ENCFF304DLW, ENCFF326UXM, ENCFF355AMN, ENCFF377UGQ, ENCFF391UFN, ENCFF467LJD, ENCFF519YGA, ENCFF590LNP, ENCFF654AEJ, ENCFF657UWH, ENCFF670FEL, ENCFF721ASG, ENCFF803VZZ, ENCFF860XMD, ENCFF920FVY, ENCFF933MOZ, ENCFF935LAF, ENCFF088SVK, ENCFF118YHP, ENCFF172DMS, ENCFF267KZS, ENCFF713JXV, ENCFF960QTC, ENCFF197NCG, ENCFF199IWW, ENCFF269AST, ENCFF592WZB, ENCFF705HQV, ENCFF720MPJ, ENCFF733LFV, ENCFF749STK, ENCFF911OIZ, SRR15198221 chr4 41956685 41956686 + Predicted LTR|ERVK|MYSERV6-int ENSMUSG00000078746.3, ENSMUSG00000078747.10, Fam205a4, Gm20878 ENCFF595WXV, SRR10697195, SRR15198224 chr4 42451019 42451020 + Predicted Retroposon|L1-dep|RMER1B ENSMUSG00000093909.3, Gm3883 ENCFF065LOT, ENCFF247QZW, ENCFF335ZSA, ENCFF348FTH, ENCFF377UGQ, ENCFF448TTG, ENCFF654AEJ, ENCFF721BNO, ENCFF914YDJ, ENCFF075EMK, SRR15198217, SRR15198218, SRR15198224, SRR2040601, SRR9080665 chr4 42454017 42454020 + Predicted LTR|ERVK|MYSERV6-int ENSMUSG00000091542.2, ENSMUSG00000093909.3, Gm17167, Gm3883 ENCFF148XRK, ENCFF199IRM, ENCFF222GPK, ENCFF394BDJ, ENCFF744OEI, ENCFF854MWX, ENCFF962OCF, ENCFF269AST, ENCFF749STK, ENCFF911OIZ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091698, SRR10697195, SRR10697200, SRR10697201, SRR11428468, SRR2927113, SRR5643192, SRR5643201, SRR6338004, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991 chr4 42537611 42537613 - Predicted LTR|ERVK|MYSERV6-int ENSMUSG00000094066.2, Fam205a2 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091697, SRR10697197, SRR5643199, SRR6338004, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178986, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr4 43340134 43340155 - Annotated LTR|ERVK|RLTR9A3 ENSMUSG00000120824.1, Gm46851 ENSMUST00000245981.1, NR_168620.1 ENCFF027RRZ, ENCFF033ZUH, ENCFF084CWD, ENCFF115LWP, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF269WEZ, ENCFF330FNX, ENCFF339MSB, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF510LAE, ENCFF521NCL, ENCFF567AFB, ENCFF573UIH, ENCFF581KUX, ENCFF608LAL, ENCFF651SDJ, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF737OUQ, ENCFF754TOT, ENCFF756QCA, ENCFF838YLT, ENCFF912MUD, ENCFF933MOZ, ENCFF943XKB, ENCFF952BCB, ENCFF969WLB, ENCFF197NCG, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF454JTI, ENCFF667KKO, ENCFF715CAJ, ENCFF827NYZ, ENCFF906OAF chr4 45640778 45640783 + Annotated DNA|hAT-Charlie|MER117 ENSMUSG00000085980.4, Gm12408 ENSMUST00000241827.1, ENSMUST00000245013.1 ENCFF377LAC, ENCFF728WJB chr4 45965334 45965336 + Annotated LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000035517.18, Tdrd7 ENSMUST00000107777.9, NM_001290475.1 chr4 46186593 46186594 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000028329.14, Xpa ENSMUST00000130051.2 chr4 47386216 47386232 + Annotated LINE|L1|L1Lx_I ENSMUSG00000007613.16, Tgfbr1 ENSMUST00000107725.3, NM_001312869.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989 chr4 47386446 47386451 + Predicted LINE|L1|L1Lx_I ENSMUSG00000007613.16, Tgfbr1 DRR091696, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR13142119, SRR13142121, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198227, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178990, SRR9178991 chr4 47898081 47898082 - Predicted LTR|ERVK|RMER17D ENSMUSG00000102450.2, Gm38343 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089650 chr4 4793128 4793399 - Annotated LTR|ERVK|MMERVK9C_I ENSMUSG00000066324.3, Bpnt2 ENSMUST00000084949.3, NM_177730.4 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102AMK, ENCFF104LLO, ENCFF106RGV, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF225MMR, ENCFF227OTT, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF289WHW, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF308LTO, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF351JWR, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF445BBH, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF495YGN, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521IDK, ENCFF527VIY, ENCFF528CBF, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF564OKH, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF667FDW, ENCFF670CXH, ENCFF683RFI, ENCFF696TCH, ENCFF711WAC, ENCFF725RXU, ENCFF734FHF, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF764EJV, ENCFF771LLL, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF865WQE, ENCFF874ELO, ENCFF878SQO, ENCFF880FYC, ENCFF888HEF, ENCFF896IIZ, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF922KQY, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF951MOU, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF233IFH, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF014CMK, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF061WTN, ENCFF065ZIE, ENCFF070YMI, ENCFF073RJJ, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF103SQR, ENCFF106GHS, ENCFF116QKZ, ENCFF117ZMM, ENCFF118YHP, ENCFF120SMK, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF222MKT, ENCFF235HER, ENCFF237JCE, ENCFF243LBQ, ENCFF243TPB, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF275TCB, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302KQL, ENCFF302MXO, ENCFF303BIV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF371ZDG, ENCFF380BYT, ENCFF380LXU, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497KLL, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF591WVP, ENCFF594GIP, ENCFF596INO, ENCFF598BFX, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF644GYU, ENCFF655CUI, ENCFF656DRS, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF698WQO, ENCFF705CES, ENCFF707HQI, ENCFF711OYQ, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF741PLM, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF780UQU, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF819JGD, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF855UFX, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF926FRX, ENCFF932XKS, ENCFF934VFW, ENCFF938XTE, ENCFF949QCF, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF994PPZ, ENCFF998BIQ, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF667KKO, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF854IBU, ENCFF888IIL, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 47996421 47996457 + Annotated SINE|Alu|B1_Mur1 ENSMUSG00000085660.2, Gm12434 ENSMUST00000141580.2 DRR091688, DRR091691, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 48369849 48369850 + Predicted LINE|L1|L1_Rod ENSMUSG00000028344.13, Invs SRR2089603, SRR2089621, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649 chr4 48382782 48382783 + Predicted SINE|MIR|MIRc ENSMUSG00000028344.13, Invs SRR2089604, SRR2089614, SRR2089631, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089651 chr4 49506556 49506558 - Annotated LTR|ERVL|MER76 ENSMUSG00000039653.10, Baat ENSMUST00000043056.9, NM_007519.3 ENCFF001RTN, ENCFF223BXU, ENCFF608LAL, ENCFF683CWD, ENCFF838YLT, ENCFF827NYZ chr4 49593889 49593914 - Annotated DNA|TcMar-Tigger|MER2 ENSMUSG00000039611.3, Pgap4 ENSMUST00000151542.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 52814604 52814628 + Annotated LINE|L1|Lx9 ENSMUSG00000089717.3, Or13f5 ENSMUST00000135738.2, NR_040661.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 53270231 53270232 - Annotated SINE|B4|ID_B1 ENSMUSG00000086712.3, Mexis ENSMUST00000123127.3, NR_033139.1 ENCFF001NDZ, ENCFF001NEC, ENCFF178ZVU, ENCFF262URV, ENCFF326TQL, ENCFF670CXH, ENCFF002SZY, ENCFF505PJK chr4 55459011 55459012 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000086346.2, Gm12510 SRR2089647, SRR2089648, SRR2089651 chr4 57742027 57742096 + Annotated SINE|Alu|B1F1 ENSMUSG00000038729.25, Pakap ENSMUST00000107600.8 DRR091690, DRR091692, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR15198220, SRR15198222, SRR15198224, SRR15198228, SRR2040601, SRR2927112, SRR6338004, SRR9080662, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 59013633 59013634 + Predicted DNA|hAT-Tag1|hAT-1_Mam ENSMUSG00000070972.14, Dnajc25 ENCFF002DMZ, ENCFF002DND, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF570KYE, ENCFF993QUE, ENCFF067UCQ, ENCFF296VFB, ENCFF326UXM, ENCFF933KQV, ENCFF935LAF, ENCFF775OZV, ENCFF306ADU, ENCFF671TUD, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697199, SRR2040601, SRR2927111, SRR2927112, SRR6338004, SRR9080663, SRR9178979, SRR9178983 chr4 59894923 59894924 - Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000073843.4, Gm12542 ENSMUST00000133015.2 chr4 62434908 62434909 - Predicted SINE|MIR|MIR3 ENSMUSG00000028393.11, Alad ENCFF001NDZ, ENCFF001NEC, ENCFF002DMZ, ENCFF002DNB, ENCFF002ERU, ENCFF089WMB, ENCFF102BWR, ENCFF106GQS, ENCFF181RDS, ENCFF198RBJ, ENCFF426QFT, ENCFF437AJW, ENCFF452AXW, ENCFF489IGD, ENCFF575RUC, ENCFF793IYH, ENCFF993QUE, ENCFF195JLT, ENCFF234LUQ, ENCFF377LAC, ENCFF455DHP, ENCFF609ZVL, ENCFF827NYZ chr4 63552646 63552671 + Annotated DNA|TcMar-Tigger|MER2 ENSMUSG00000086817.2, Gm11482 ENSMUST00000147067.2, NR_151544.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr4 63900762 63900763 - Predicted SINE|MIR|MIRb ENSMUSG00000028364.16, Tnc DRR091691, DRR091695, DRR091699, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198223, SRR15198225, SRR15198226, SRR9178983, SRR9178986, SRR9178987, SRR9178989, SRR9178991 chr4 64072604 64072605 + Annotated LINE|L2|L2a ENSMUSG00000120418.1, ENSMUSG00000120418 ENSMUST00000243199.1 chr4 6454472 6454476 - Predicted LINE|L1|L1MB7 ENSMUSG00000028245.16, Nsmaf ENCFF114PSQ, ENCFF138QRF, ENCFF163LPQ, ENCFF196PBF, ENCFF291LRG, ENCFF381JXP, ENCFF533CLY, ENCFF533JUU, ENCFF560YXX, ENCFF667FDW, ENCFF734FHF, ENCFF755FCM, ENCFF773VFS, ENCFF849GVQ, ENCFF170XMM, ENCFF754TOT, ENCFF845NXM, ENCFF862FYE, ENCFF975NCY, ENCFF004AEL, ENCFF143RTP, ENCFF177LXI, ENCFF194DAO, ENCFF249LSC, ENCFF280LCC, ENCFF299ENO, ENCFF390AUP, ENCFF482VRF, ENCFF594GIP, ENCFF619SKV, ENCFF695XIY, ENCFF698WQO, ENCFF926IDV, ENCFF008XVO, ENCFF481CFU, ENCFF499GDC, ENCFF569XGG, ENCFF906OAF, ENCFF911OIZ, SRR11428467, SRR11428470 chr4 6454641 6454675 - Predicted LINE|L1|L1MB7 ENSMUSG00000028245.16, Nsmaf ENCFF001NCP, ENCFF001RTN, ENCFF133PEB, ENCFF415KCJ, ENCFF534DID, ENCFF641QXI, ENCFF962LFN, ENCFF972IVS, ENCFF005GQR, ENCFF013CHH, ENCFF027RRZ, ENCFF052WUB, ENCFF060JCS, ENCFF065TCZ, ENCFF084CWD, ENCFF101BDM, ENCFF134HVE, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269WEZ, ENCFF296VFB, ENCFF308FEA, ENCFF330FNX, ENCFF335ZSA, ENCFF355AMN, ENCFF364LFJ, ENCFF369YLA, ENCFF377LAC, ENCFF391UFN, ENCFF408NBX, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF533DWD, ENCFF581KUX, ENCFF588DUN, ENCFF590LNP, ENCFF608LAL, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF826RUZ, ENCFF829RHM, ENCFF840XYZ, ENCFF854KNE, ENCFF886BRO, ENCFF912MUD, ENCFF933MOZ, ENCFF939IUH, ENCFF962OCF, ENCFF964WZW, ENCFF970VKB, ENCFF222MKT, ENCFF267KZS, ENCFF316EEH, ENCFF321NRW, ENCFF454DOT, ENCFF606XHA, ENCFF637PIP, ENCFF705CES, ENCFF747VYT, ENCFF075EMK, ENCFF119IHT, ENCFF178HDG, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF366CUG, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF667KKO, ENCFF670VVN, ENCFF705HQV, ENCFF716YKR, ENCFF720MPJ, ENCFF728WJB, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF932SOZ, SRR10697203, SRR11428467, SRR11428468, SRR15198219, SRR15198221, SRR2040601, SRR2927111, SRR2927113 chr4 6454753 6454754 - Predicted LINE|L1|L1MB7 ENSMUSG00000028245.16, Nsmaf ENCFF001NCP, ENCFF001NDD, ENCFF064PBF, ENCFF415KCJ, ENCFF534DID, ENCFF005GQR, ENCFF013CHH, ENCFF027RRZ, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF084CWD, ENCFF115LWP, ENCFF134HVE, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF173IVH, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF245ZOR, ENCFF247QZW, ENCFF261ZZF, ENCFF296VFB, ENCFF330FNX, ENCFF335ZSA, ENCFF355AMN, ENCFF369YLA, ENCFF377LAC, ENCFF391UFN, ENCFF408NBX, ENCFF429BQZ, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF533DWD, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF608LAL, ENCFF642YTY, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF747XPP, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF826RUZ, ENCFF829RHM, ENCFF840XYZ, ENCFF854KNE, ENCFF886BRO, ENCFF912MUD, ENCFF933MOZ, ENCFF939IUH, ENCFF962OCF, ENCFF964WZW, ENCFF222MKT, ENCFF321NRW, ENCFF454DOT, ENCFF637PIP, ENCFF705CES, ENCFF075EMK, ENCFF119IHT, ENCFF178HDG, ENCFF242SVY, ENCFF254YNR, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF366CUG, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF667KKO, ENCFF670VVN, ENCFF705HQV, ENCFF716YKR, ENCFF720MPJ, ENCFF728WJB, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, SRR10697203, SRR11428468, SRR15198219, SRR15198221, SRR2040601, SRR2927111, SRR2927113 chr4 66746439 66746440 + Annotated SINE|MIR|MIRc ENSMUSG00000039005.14, Tlr4 ENSMUST00000147008.2 chr4 6702110 6702111 + Predicted LINE|L1|Lx8 ENSMUSG00000086052.2, Gm11802 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091696, DRR091697, DRR091698, SRR10697197, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198225, SRR15198226, SRR2040601, SRR2927113, SRR3178204, SRR5643190, SRR5643199, SRR6338004, SRR9178976, SRR9178979, SRR9178982, SRR9178985 chr4 76130749 76130750 - Predicted LINE|L1|L1MdA_I ENSMUSG00000028399.19, Ptprd SRR2089632, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089650, SRR2089651 chr4 76131286 76131287 - Predicted LINE|L1|L1MdA_I ENSMUSG00000028399.19, Ptprd SRR2089619, SRR2089623, SRR2089629, SRR2089630, SRR2089633, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089650, SRR2089651 chr4 77726369 77726370 - Predicted LTR|ERVK|RMER6B ENSMUSG00000028399.19, Ptprd SRR2089605, SRR2089615, SRR2089616, SRR2089620 chr4 83384203 83384240 + Predicted SINE|B2|B3 ENSMUSG00000028483.14, Snapc3 ENCFF051JGE, ENCFF083BIG, ENCFF108UNS, ENCFF198NQV, ENCFF198RBJ, ENCFF321BMO, ENCFF327MSM, ENCFF332ZPO, ENCFF502ANK, ENCFF552DRF, ENCFF570GTP, ENCFF575RUC, ENCFF623BKO, ENCFF793IYH, ENCFF910ESY, ENCFF925ONP, ENCFF016CHX, ENCFF045YRV, ENCFF060FGD, ENCFF098AYQ, ENCFF124SSE, ENCFF310HAL, ENCFF386XTQ, ENCFF468RDR, ENCFF519AKK, ENCFF538AIM, ENCFF593TQB, ENCFF613SEJ, ENCFF711OYQ, ENCFF756QJD, ENCFF840EFC, ENCFF847HFJ, ENCFF881YOK, SRR6904685 chr4 8587284 8587293 + Predicted LINE|L1|L1MD1 ENSMUSG00000047187.10, Rab2a ENCFF075MGH, ENCFF348VIH, ENCFF570GTP, ENCFF913CFN, ENCFF195JLT, ENCFF019PVP, ENCFF065UBR, ENCFF077YZF, ENCFF155GUC, ENCFF166UTY, ENCFF175LCC, ENCFF223SMG, ENCFF437QAE, ENCFF513BRJ, ENCFF647KBV, ENCFF804EWD, ENCFF829WND, ENCFF849PKR, ENCFF858OFI chr4 86629269 86629366 + Predicted LTR|ERVK|MLTR25A ENSMUSG00000038024.18, Dennd4c ENCFF056GXQ, ENCFF091WMS, ENCFF092YWY, ENCFF107XGE, ENCFF119KNP, ENCFF120DEX, ENCFF133PEB, ENCFF142CUS, ENCFF178ZVU, ENCFF184EAT, ENCFF196PBF, ENCFF210BCB, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF251TMY, ENCFF262WAE, ENCFF269UZL, ENCFF274WSX, ENCFF277XPM, ENCFF289WHW, ENCFF296ASE, ENCFF297BEX, ENCFF305IXM, ENCFF319INV, ENCFF334RGJ, ENCFF348VIH, ENCFF376MQF, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF439OFV, ENCFF445BBH, ENCFF453XOG, ENCFF478FDA, ENCFF491XRO, ENCFF522VLI, ENCFF589REP, ENCFF590NVM, ENCFF605IFN, ENCFF625JLB, ENCFF641QXI, ENCFF647ICR, ENCFF670YKO, ENCFF686EWL, ENCFF704GEB, ENCFF707QJV, ENCFF723QIC, ENCFF745HSV, ENCFF764EJV, ENCFF771LLL, ENCFF793STU, ENCFF802GAN, ENCFF823PZU, ENCFF828WIK, ENCFF858CRT, ENCFF858CTQ, ENCFF865WQE, ENCFF884DLS, ENCFF896MQK, ENCFF913CFN, ENCFF931PFF, ENCFF937GBW, ENCFF942WIP, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF985BLV, ENCFF002ZAX, ENCFF014CMK, ENCFF015JJB, ENCFF027GBM, ENCFF035BBA, ENCFF037LEJ, ENCFF039PJR, ENCFF043DTH, ENCFF052RNG, ENCFF053NFR, ENCFF065ZIE, ENCFF068CQU, ENCFF117ZMM, ENCFF118YHP, ENCFF127KHN, ENCFF128CYW, ENCFF133KGZ, ENCFF148BPZ, ENCFF158HQO, ENCFF162FTA, ENCFF170KWW, ENCFF205CDI, ENCFF207HZS, ENCFF235HER, ENCFF249LSC, ENCFF254TFB, ENCFF255ESE, ENCFF258WLS, ENCFF264PYB, ENCFF279EVY, ENCFF285NFL, ENCFF299ENO, ENCFF305GPD, ENCFF310HAL, ENCFF315OFF, ENCFF332IRR, ENCFF346HDC, ENCFF350PHR, ENCFF357AGP, ENCFF369VAI, ENCFF370VOV, ENCFF386HCR, ENCFF399TOF, ENCFF426ETE, ENCFF433QNW, ENCFF460FON, ENCFF478BEL, ENCFF486GBM, ENCFF505YPK, ENCFF507WIK, ENCFF543PXT, ENCFF548JDU, ENCFF561CZI, ENCFF573WSG, ENCFF581ZWM, ENCFF596INO, ENCFF596PMK, ENCFF598BFX, ENCFF609WDV, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF632HDE, ENCFF633QXI, ENCFF640RWH, ENCFF655CUI, ENCFF655KBW, ENCFF661TOM, ENCFF672WYO, ENCFF680WIN, ENCFF696VQM, ENCFF698WQO, ENCFF712BKP, ENCFF737VKP, ENCFF742DJH, ENCFF746ZCS, ENCFF754VQW, ENCFF758BKM, ENCFF765UBL, ENCFF770WIT, ENCFF775OZV, ENCFF781MKK, ENCFF786BUI, ENCFF789AOM, ENCFF791ZDR, ENCFF801SNQ, ENCFF806XNV, ENCFF818ZJQ, ENCFF858OFI, ENCFF869MFM, ENCFF871CMC, ENCFF881YOK, ENCFF916BSM, ENCFF938XTE, ENCFF974KKD, ENCFF996WVL, ENCFF997QQG, ENCFF999ZYF chr4 86848928 86848969 + Annotated LTR|ERVK|RLTR51A_Mm ENSMUSG00000038007.15, Acer2 ENSMUST00000135874.2 ENCFF001NDA, ENCFF001NDD, ENCFF002EZU, ENCFF002EZW, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF005GQR, ENCFF222GPK, ENCFF271OHB, ENCFF296VFB, ENCFF348FTH, ENCFF374YTS, ENCFF377UGQ, ENCFF465BBM, ENCFF468AKL, ENCFF487DYP, ENCFF572TOH, ENCFF587VDB, ENCFF632LPV, ENCFF636NES, ENCFF744OEI, ENCFF854MWX, ENCFF860XMD, ENCFF914YDJ, ENCFF075EMK, ENCFF269AST, ENCFF911OIZ, DRR091688, DRR091690, DRR091692, DRR091693, DRR091695, DRR091696, DRR091699, SRR10697196, SRR10697199, SRR10697200, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178983, SRR9178986, SRR9178989 chr4 88042673 88042674 + Annotated SINE|MIR|MIR ENSMUSG00000038368.17, Focad ENSMUST00000147527.2 ENCFF358UFZ, ENCFF691URX, ENCFF414IHO, ENCFF750IZJ, ENCFF896XAZ chr4 88353303 88353304 - Predicted LTR|ERVK|RLTR13D ENSMUSG00000028497.13, Hacd4 ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF426QFT, ENCFF101BDM, ENCFF245ZOR, ENCFF296VFB, ENCFF444YCN, ENCFF657OJR, ENCFF657UWH, ENCFF826RUZ, SRR2927112 chr4 88957409 88957429 - Annotated LINE|L1|L1MB2 ENSMUSG00000117251.2, Gm49891 ENSMUST00000232991.2 ENCFF067UCQ, ENCFF134HVE, ENCFF236TUH, ENCFF245ZOR, ENCFF304DLW, ENCFF390NKP, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF657UWH, ENCFF686KMX, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF160TQC, ENCFF199IWW, ENCFF344OJQ, ENCFF423TSB, ENCFF641WPY, ENCFF723MAR chr4 91534427 91534428 + Predicted LINE|L1|Lx9 ENSMUSG00000086042.2, Gm12670 SRR13142121, SRR13142122, SRR13142123 chr4 93369570 93369615 - Annotated LTR|ERVL|LTR84a ENSMUSG00000120651.1, ENSMUSG00000120651 ENSMUST00000247343.1, ENSMUST00000244873.1, ENSMUST00000246239.1 ENCFF001NEC, ENCFF575RUC, ENCFF793IYH, ENCFF993QUE chr4 94365416 94365462 - Annotated LTR|ERVL-MaLR|MTEa ENSMUSG00000087128.9, Gm12655 ENSMUST00000127678.3, ENSMUST00000243092.1, ENSMUST00000243295.1 ENCFF002EZU, ENCFF002FAC, ENCFF348FTH, ENCFF592GVA, ENCFF804UQS, ENCFF840XYZ, ENCFF160TQC, ENCFF592WZB chr4 97457516 97457522 - Predicted LINE|L1|Lx10 ENSMUSG00000048747.15, E130114P18Rik ENCFF060JCS, ENCFF326UXM, ENCFF355AMN, ENCFF377LAC, ENCFF385UBP, ENCFF587VDB, ENCFF725ATS, ENCFF733MXU, ENCFF747XPP, ENCFF809FPA, ENCFF822PGJ, ENCFF860XMD, ENCFF967NOO, ENCFF510AYI, ENCFF510IAG, SRR13142118, SRR15198218, SRR15198221 chr4 98681986 98682006 + Annotated LTR|ERVK|RLTR31C_MM ENSMUSG00000085843.2, Kank4os ENSMUST00000133455.2, NR_040437.1 ENCFF001NDA, ENCFF001NDD, ENCFF521IDK, ENCFF696TCH, DRR091689, DRR091690, DRR091692, DRR091693, DRR091695, DRR091696, DRR091698, DRR091699, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178987 chr4 99009760 99009761 - Predicted SINE|MIR|MIRb ENSMUSG00000028556.16, Dock7 ENCFF002FAI, ENCFF091WMS, ENCFF590NVM, ENCFF813ZJI, ENCFF991TPB, ENCFF465BBM, ENCFF500QZK, ENCFF647TTU, ENCFF103SQR, ENCFF313IFI, ENCFF387BVS, ENCFF680WIN, ENCFF242SVY chr4 99079706 99079707 + Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000028550.16, Atg4c ENCFF347UAC, ENCFF491XRO, ENCFF802GAN, ENCFF808XFI, ENCFF931DDH, ENCFF422CQE, ENCFF517EJZ, ENCFF667RGF, ENCFF696XZL, ENCFF727EPG, ENCFF900AIQ, ENCFF960QTC chr4 99081078 99081079 + Predicted LTR|ERVL|MT2A ENSMUSG00000028550.16, Atg4c ENCFF114PSQ, ENCFF262URV, ENCFF330LWU, ENCFF519IZA, ENCFF937GBW, ENCFF989HJD, ENCFF088SVK, ENCFF116QKZ, ENCFF148BPZ, ENCFF172DMS, ENCFF286GUQ, ENCFF299ENO, ENCFF376PQU, ENCFF466RIS, ENCFF598WAL, ENCFF716NXU, ENCFF949QCF, ENCFF970LRH chr4 99081675 99081676 + Predicted SINE|Alu|PB1D10 ENSMUSG00000028550.16, Atg4c ENCFF126HTW, ENCFF251TMY, ENCFF404PYQ, ENCFF420RFN, ENCFF711WAC, ENCFF917RNE, ENCFF985BLV, ENCFF394BDJ, ENCFF744OEI, ENCFF174EGP, ENCFF268ZHE, ENCFF476JSK, ENCFF563FUC, ENCFF712BKP, ENCFF747VYT, ENCFF840DKD, ENCFF510IAG, ENCFF670VVN, SRR13142120, SRR15198226, SRR15198227 chr5 100358550 100358552 + Annotated LTR|ERVK|RMER19B ENSMUSG00000100157.8, 2310034O05Rik ENSMUST00000247130.1, ENSMUST00000185221.8, NR_040679.1 chr5 100385366 100385367 - Annotated LTR|ERVK|RLTR44D ENSMUSG00000121065.1, ENSMUSG00000121065 ENSMUST00000247054.1 chr5 100450229 100450230 + Annotated LTR|ERVK|RMER19B NR_152163.1 chr5 100711288 100711325 - Annotated SINE|Alu|PB1D7 ENSMUSG00000029322.13, Plac8 ENSMUST00000112910.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR9080662, SRR9080663, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr5 100993687 100993688 - Predicted SINE|Alu|B1F1 ENSMUSG00000035234.19, Abraxas1 ENCFF888IIL, DRR091689, DRR091695, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR6338003, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr5 101851685 101851686 - Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000105097.2, Gm42133 ENCFF002EZU, DRR091689, DRR091698, SRR10697197, SRR13142118, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198227, SRR2927111, SRR9178978, SRR9178980, SRR9178981, SRR9178983, SRR9178985, SRR9178986, SRR9178989, SRR9178990, SRR9178991 chr5 102226729 102226730 - Predicted LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000043940.16, Wdfy3 DRR091688, DRR091695, SRR10697200, SRR13142118, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR9080666, SRR9178977, SRR9178978, SRR9178980, SRR9178984, SRR9178987, SRR9178989, SRR9178990, SRR9178991 chr5 10237833 10237840 + Annotated LTR|ERVL-MaLR|ORR1A0 ENSMUSG00000073226.10, Gm10482 ENSMUST00000190891.7, ENSMUST00000189825.2 chr5 10299019 10299110 + Annotated LTR|ERVL-MaLR|ORR1A3-int ENSMUSG00000105157.2, Gm31831 ENSMUST00000198581.2, ENSMUST00000196240.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9178976, SRR9178979, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178990, SRR9178992 chr5 103504563 103504564 - Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000104684.2, 5430427N15Rik ENSMUST00000200007.2 chr5 104345441 104345442 + Annotated LTR|ERVK|RMER19B NM_001359013.1 ENCFF005GQR, ENCFF013CHH, ENCFF296VFB, ENCFF374YTS, ENCFF394BDJ, ENCFF465BBM, ENCFF468AKL, ENCFF572TOH, ENCFF587VDB, ENCFF632LPV, ENCFF733MXU, ENCFF967NOO, ENCFF075EMK, ENCFF670VVN chr5 105231719 105231720 - Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000029298.16, ENSMUSG00000034438.17, Gbp9, Gbp8 ENCFF051JGE, ENCFF102BWR, ENCFF407JTK, ENCFF585CYT chr5 105549111 105549112 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000097237.2, Gm26519 ENSMUST00000181193.2 chr5 105557205 105557206 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000106438.3, Gm32051 ENSMUST00000196818.3, ENSMUST00000244147.1 ENCFF001NDZ, ENCFF002ERU, ENCFF002ERW, ENCFF450WAV, ENCFF874ELO chr5 105879437 105879730 + Annotated LINE|L2|X24_LINE ENSMUSG00000046079.17, Lrrc8d ENSMUST00000127686.8 ENCFF001NEC, ENCFF043JGD, ENCFF051JSS, ENCFF051PTY, ENCFF059IQN, ENCFF074HTO, ENCFF090USB, ENCFF094CCP, ENCFF104LLO, ENCFF125HRQ, ENCFF140VGY, ENCFF142CUS, ENCFF178PMH, ENCFF179WPT, ENCFF186RYS, ENCFF218HNK, ENCFF261OTH, ENCFF273TLO, ENCFF296ASE, ENCFF297BEX, ENCFF310HPH, ENCFF344ILW, ENCFF392TDB, ENCFF400XLQ, ENCFF420RFN, ENCFF421SNO, ENCFF422ATU, ENCFF453XOG, ENCFF470MXU, ENCFF482MUH, ENCFF495SQR, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF521UGJ, ENCFF524EDD, ENCFF548SLN, ENCFF564OKH, ENCFF570GTP, ENCFF595GFM, ENCFF623BKO, ENCFF625JLB, ENCFF670CXH, ENCFF683RFI, ENCFF784LWT, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF828WIK, ENCFF841OXD, ENCFF851ESH, ENCFF880FYC, ENCFF896IIZ, ENCFF914BRK, ENCFF933UPG, ENCFF934ZAP, ENCFF956WVJ, ENCFF991TPB, ENCFF996STG, ENCFF775SSI, ENCFF912MUD, ENCFF002SZY, ENCFF004AEL, ENCFF027GBM, ENCFF034WGV, ENCFF053NFR, ENCFF077YZF, ENCFF078CCF, ENCFF080BTV, ENCFF080REY, ENCFF082OML, ENCFF088PZI, ENCFF095NMU, ENCFF106GHS, ENCFF120SMK, ENCFF121IDD, ENCFF137OYQ, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF174EGP, ENCFF177SGB, ENCFF197TJB, ENCFF205CDI, ENCFF208BJY, ENCFF229CPV, ENCFF237JCE, ENCFF267KZS, ENCFF272VMY, ENCFF273CBP, ENCFF279EVY, ENCFF286RSE, ENCFF296UDD, ENCFF303BIV, ENCFF315OFF, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332RWQ, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF363PDR, ENCFF366CSN, ENCFF369VAI, ENCFF371ZDG, ENCFF380BYT, ENCFF403RPK, ENCFF426ETE, ENCFF426FAF, ENCFF430ERW, ENCFF450CUC, ENCFF456GLS, ENCFF469JWF, ENCFF482VRF, ENCFF490ULA, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF541HSQ, ENCFF572JDP, ENCFF578MOR, ENCFF578YPJ, ENCFF598LJF, ENCFF598WAL, ENCFF601JTS, ENCFF606XHA, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF668SQN, ENCFF673GRZ, ENCFF681EEO, ENCFF689UNV, ENCFF716NXU, ENCFF724VJN, ENCFF749XRU, ENCFF751QWY, ENCFF753HNF, ENCFF766UJI, ENCFF769FVU, ENCFF779MMO, ENCFF781MKK, ENCFF782CNW, ENCFF791AUB, ENCFF794GVC, ENCFF796TQV, ENCFF834TET, ENCFF834TQY, ENCFF863LMG, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF877VSZ, ENCFF926FRX, ENCFF927LFD, ENCFF956ZKG, ENCFF958BIE, ENCFF960QTC, ENCFF970WCD, ENCFF983GRF, ENCFF994PPZ, ENCFF998BIQ, SRR15198223 chr5 106772241 106772298 - Annotated LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000049606.17, Zfp644 ENSMUST00000112694.6 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 107203006 107203050 + Annotated LINE|L2|L2b ENSMUSG00000106554.3, Gm33474 ENSMUST00000242071.1, ENSMUST00000243920.1, ENSMUST00000243509.1 ENCFF101BDM, ENCFF236TUH, ENCFF467LJD, ENCFF510LAE, ENCFF775SSI, ENCFF804UQS, ENCFF868WEJ, ENCFF912MUD, ENCFF964WZW, ENCFF423TSB chr5 107550602 107550603 + Annotated LINE|L1|L1MD ENSMUSG00000033805.13, Ephx4 ENSMUST00000159968.8 chr5 108586923 108586951 - Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000050856.17, Atp5k ENCFF133PEB, ENCFF277XPM, ENCFF393UZV, ENCFF540XSD, ENCFF570GTP, ENCFF881TID, ENCFF884TJE, ENCFF896MQK, ENCFF002ZAX, ENCFF006JHA, ENCFF055PZZ, ENCFF080DNG, ENCFF090EUZ, ENCFF118PQI, ENCFF149DFF, ENCFF151XBP, ENCFF192XJA, ENCFF222MKT, ENCFF308WGP, ENCFF363PDR, ENCFF386XTQ, ENCFF394AUR, ENCFF403CRC, ENCFF404HLB, ENCFF420REU, ENCFF437QAE, ENCFF453MPR, ENCFF479WHZ, ENCFF485GFE, ENCFF486BJT, ENCFF505YPK, ENCFF522KWW, ENCFF543GNI, ENCFF593TQB, ENCFF603QSQ, ENCFF637GVH, ENCFF647KBV, ENCFF647RUH, ENCFF655KBW, ENCFF657NUT, ENCFF658NHH, ENCFF706BUS, ENCFF726YTS, ENCFF742DJH, ENCFF753HNF, ENCFF755REI, ENCFF758IOS, ENCFF759WDO, ENCFF781XUM, ENCFF790WIY, ENCFF832FTK, ENCFF840EFC, ENCFF848LWJ, ENCFF858OFI, ENCFF926IDV, ENCFF932XKS, ENCFF936LNA, ENCFF938CNS, ENCFF939UBM chr5 108898820 108898821 - Annotated LINE|L1|Lx ENSMUSG00000055385.13, Rnf212 ENSMUST00000196652.5 chr5 108912364 108912365 + Predicted LTR|ERVL|MT2A ENSMUSG00000101762.2, 1700047L14Rik SRR11428468, SRR15198221, SRR15198223, SRR15198224, SRR15198225 chr5 108997647 108997648 + Annotated LTR|ERVK|RLTR9A3B ENSMUSG00000093479.2, Gm20629 ENSMUST00000176157.2 SRR15198226, SRR2927111, SRR2927113 chr5 10914885 10914887 + Predicted LINE|L1|Lx2A1 ENSMUSG00000091422.9, Gm6455 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178206, SRR5643190, SRR6338004, SRR6904684, SRR9080665, SRR9178989 chr5 10981750 10981751 - Predicted LINE|L1|Lx8b ENSMUSG00000106652.2, Gm43358 DRR091690, DRR091691, SRR15198217, SRR15198218, SRR15198224, SRR15198227, SRR2040601, SRR2927111, SRR2927113 chr5 10996627 10996634 + Predicted LINE|L1|Lx2A1 ENSMUSG00000095710.8, Gm8871 DRR091689, DRR091690, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697195, SRR11428467, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111 chr5 109995230 109995253 - Predicted LTR|ERVK|RMER17D2 ENSMUSG00000105471.3, ENSMUSG00000120227.1, A430073D23Rik, ENSMUSG00000120227 DRR091689, DRR091691, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697195, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 110597806 110597814 - Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000043323.18, Fbrsl1 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091696, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080666 chr5 110927101 110927102 + Predicted LINE|L1|L1MdV_III ENSMUSG00000086401.2, Gm15559 SRR10697203, SRR15198225, SRR9178977, SRR9178979, SRR9178983, SRR9178988, SRR9178991 chr5 111065813 111065814 + Predicted LINE|L1|L1_Mur3 ENSMUSG00000033209.18, Ttc28 ENCFF002FAA, ENCFF002FAE, DRR091697, SRR10697200, SRR13142123, SRR2040601, SRR2927113, SRR9178987 chr5 111077930 111077931 + Predicted LINE|L1|Lx3B ENSMUSG00000033209.18, Ttc28 SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR5643192, SRR9178985 chr5 111113075 111113079 + Predicted SINE|B2|B3 ENSMUSG00000033209.18, Ttc28 SRR2089603, SRR2089605, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089619, SRR2089622, SRR2089623, SRR2089631, SRR2089632, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089647, SRR2089648, SRR2089651 chr5 112797233 112797234 + Annotated LINE|L1|L1_Mur3 ENSMUSG00000105152.2, Gm42864 ENSMUST00000198371.2 ENCFF148XRK, ENCFF374YTS, ENCFF448TTG, ENCFF636NES, ENCFF914YDJ, ENCFF075EMK, ENCFF510IAG, ENCFF749STK, ENCFF911OIZ chr5 112834952 112834953 + Predicted SINE|MIR|MIRb ENSMUSG00000104807.2, Gm42865 SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089650 chr5 113734510 113734534 - Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000120761.1, ENSMUSG00000120761 ENSMUST00000245681.1, ENSMUST00000245812.1 ENCFF001NDA, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr5 11378591 11378592 - Predicted LINE|L1|Lx8b ENSMUSG00000106148.2, Gm32877 SRR13142121, SRR5643190, SRR5643199, SRR6338004, SRR9080666, SRR9178981, SRR9178991 chr5 11390373 11390374 + Predicted LINE|L1|Lx2 ENSMUSG00000095829.9, Speer1 DRR091689, DRR091694, DRR091696, SRR10697195, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr5 114136059 114136060 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000042096.16, Dao ENCFF521IDK, ENCFF696TCH, ENCFF487DYP, ENCFF655CUI, ENCFF269AST, ENCFF499GDC, ENCFF574YMK, ENCFF932SOZ, SRR13142119, SRR2040601 chr5 114913577 114913578 - Annotated SINE|MIR|MIRb ENSMUSG00000041890.18, Git2 ENSMUST00000131016.2 chr5 114990009 114990010 + Annotated SINE|Alu|B1_Mus2 ENSMUSG00000098343.3, Mir6240 ENSMUST00000184281.3, NR_105748.1 SRR13142119, SRR15198221, SRR15198223, SRR15198228 chr5 115027988 115027989 + Predicted LTR|ERV1|RLTR6_Mm ENSMUSG00000029561.18, Oasl2 ENCFF138QRF, ENCFF179WPT, ENCFF264DCN, ENCFF828WIK, ENCFF989HJD, ENCFF034WGV, ENCFF134PXJ, ENCFF149BQJ, ENCFF203EWG, ENCFF698WQO, ENCFF700IPC chr5 115034766 115034767 + Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000029561.18, Oasl2 ENCFF136POG, ENCFF352VWM, ENCFF667FDW, ENCFF734FHF, ENCFF177LXI, ENCFF210BVU, ENCFF370VOV, ENCFF518TUP, ENCFF843WRN chr5 115375703 115375704 + Predicted SINE|B4|ID_B1 ENSMUSG00000060152.15, Pop5 ENCFF005GQR, ENCFF067UCQ, ENCFF134HVE, ENCFF143BIC, ENCFF247QZW, ENCFF251WZA, ENCFF271OHB, ENCFF355AMN, ENCFF374YTS, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF487DYP, ENCFF500QZK, ENCFF521NCL, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF604SXL, ENCFF636NES, ENCFF647TTU, ENCFF657UWH, ENCFF721BNO, ENCFF733MXU, ENCFF744OEI, ENCFF860XMD, ENCFF952BCB, ENCFF962OCF, ENCFF423TSB, ENCFF481CFU, ENCFF911OIZ, ENCFF970VKL, SRR11428468 chr5 11542518 11542519 - Predicted LINE|L1|Lx8b ENSMUSG00000105688.2, ENSMUSG00000106034.2, 4930437M23Rik, 1700108N06Rik SRR10697195, SRR10697198, SRR10697201, SRR10697202, SRR10697203, SRR5643201, SRR9080662, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178991, SRR9178992 chr5 115453015 115453019 + Predicted LTR|ERVL|RMER15 ENSMUSG00000086368.4, Gm13830 DRR091699, SRR11428468, SRR13142120, SRR15198217, SRR15198219, SRR15198221, SRR3178203, SRR3178204, SRR3178206, SRR6904683, SRR6904684, SRR6904685, SRR9080664 chr5 116576771 116576782 + Annotated LTR|ERVK|RLTR11A ENSMUSG00000086219.9, Srrm4os ENSMUST00000247262.1, ENSMUST00000133548.5, ENSMUST00000126959.5, NR_015595.3 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF590LNP, ENCFF642YTY, ENCFF643XFK, ENCFF705HQV chr5 11722760 11722761 - Predicted LINE|L1|Lx8b ENSMUSG00000099391.3, ENSMUSG00000105299.2, 1700003C15Rik, Gm33847 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR5643199, SRR5643201, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr5 117271066 117271103 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000061288.14, Taok3 ENCFF002ERW, ENCFF130KZZ, ENCFF163LPQ, ENCFF307VAF, ENCFF486NGU, ENCFF544BEF, ENCFF605IFN, ENCFF698LQF, ENCFF704GEB, ENCFF784LWT, ENCFF794FBC, ENCFF902GVX, ENCFF942WIP, ENCFF002ZAX, ENCFF019PWU, ENCFF043DTH, ENCFF066UDR, ENCFF118PQI, ENCFF242MZE, ENCFF272VMY, ENCFF276OPJ, ENCFF286GUQ, ENCFF324ITL, ENCFF331YYO, ENCFF357AGP, ENCFF366CSN, ENCFF382VCK, ENCFF414IHO, ENCFF429ZEH, ENCFF470RDW, ENCFF477MBL, ENCFF484PQK, ENCFF507WIK, ENCFF513BRJ, ENCFF524FJG, ENCFF580KHN, ENCFF644EGG, ENCFF681EEO, ENCFF687GPO, ENCFF706BUS, ENCFF775OZV, ENCFF840DKD, ENCFF903KDM, ENCFF928YDQ, ENCFF931NMQ, ENCFF939UBM, ENCFF951GZB, ENCFF951PCM, ENCFF952EQQ, ENCFF958LRX chr5 118174096 118174097 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000029359.14, Tesc ENSMUST00000151792.8 ENCFF001NDD, ENCFF089PFT, ENCFF521IDK chr5 119246299 119246302 + Annotated SINE|MIR|MIRc ENSMUSG00000100573.2, 1700081H04Rik ENSMUST00000190550.2, NR_040693.1 DRR091689, DRR091693, SRR15198218, SRR15198219, SRR15198220, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2040601, SRR9178977 chr5 119460032 119460033 + Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000120005.1, ENSMUSG00000120005 ENSMUST00000241003.1 chr5 120020005 120020014 + Predicted SINE|MIR|MIR ENSMUSG00000018263.12, Tbx5 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697197, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927113, SRR9178978, SRR9178982, SRR9178985 chr5 120099646 120099647 + Predicted LTR|ERVL-MaLR|ORR1G ENSMUSG00000107063.2, Gm38554 SRR3178205, SRR6904683, SRR6904685, SRR9080662 chr5 120662065 120662066 + Predicted SINE|MIR|MIRc ENSMUSG00000032754.15, Slc8b1 ENCFF002DNB, ENCFF002EZW, ENCFF051JGE, ENCFF143PHU, ENCFF502ANK, ENCFF885AJK chr5 120790880 120790881 + Predicted SINE|MIR|MIR3 ENSMUSG00000029602.12, Rasal1 ENCFF001RTF, ENCFF002EZW, ENCFF002FAG chr5 121468383 121468384 - Annotated LTR|ERVK|IAPLTR2a ENSMUSG00000120570.1, ENSMUSG00000120570 ENSMUST00000244237.1 ENCFF001RTF chr5 121568451 121568452 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000042719.18, Naa25 ENCFF462ABU, ENCFF606EDP, ENCFF618SIR, ENCFF781XUM, ENCFF810SCH, ENCFF951GZB, ENCFF964HGL chr5 121817881 121817882 + Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000029458.15, Brap ENCFF002DMZ, ENCFF051JGE, ENCFF089WMB, ENCFF143PHU, ENCFF327MSM, ENCFF502ANK, ENCFF888LGA, ENCFF057MDU, ENCFF155GUC, ENCFF197OUM, ENCFF334XFS, ENCFF383AJS, ENCFF689ZLL, ENCFF894SHM, SRR3178203, SRR3178204, SRR3178205, SRR3178206 chr5 122062983 122062984 - Annotated LTR|ERVK|RLTR51A_Mm ENSMUSG00000042589.19, Cux2 ENSMUST00000168288.9 chr5 122181907 122181908 - Predicted SINE|MIR|MIR ENSMUSG00000042589.19, Cux2 ENCFF065TCZ, ENCFF478KOR, ENCFF657UWH, ENCFF818BAS, ENCFF199IWW, ENCFF670VVN, SRR15198219, SRR15198227 chr5 122239643 122239644 + Annotated SINE|MIR|MIRb ENSMUSG00000013936.13, Myl2 ENSMUST00000153816.6 ENCFF052WUB, ENCFF151YNV, ENCFF829RHM, ENCFF783KGQ chr5 122698808 122698809 - Predicted LINE|L1|HAL1 ENSMUSG00000029469.15, Ift81 ENCFF467LJD, ENCFF804UQS, ENCFF490ULA, SRR6904683, SRR6904685 chr5 122859690 122859728 + Predicted SINE|Alu|B1_Mur3 ENSMUSG00000029470.16, P2rx4 ENCFF086ZMV, ENCFF147GLI, ENCFF264RIV, ENCFF667FDW, ENCFF755IDE, ENCFF931HCN, ENCFF994BOT, ENCFF039PJR, ENCFF043DTH, ENCFF107YGR, ENCFF210BVU, ENCFF433QNW, ENCFF437QAE, ENCFF505YPK, ENCFF572SQL, ENCFF765AQX, ENCFF994JUO chr5 122881289 122881290 - Predicted SINE|B4|ID_B1 ENSMUSG00000029471.14, Camkk2 SRR10697197, SRR11428468, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991 chr5 123150936 123150941 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000105311.2, ENSMUSG00000106555.5, Gm44574, Gm2479 ENSMUST00000172729.2, ENSMUST00000173670.4 chr5 123180148 123180149 + Predicted LINE|L1|L1MA9 ENSMUSG00000105107.2, Gm43412 SRR2089636, SRR2089637, SRR2089647, SRR2089648, SRR2089650, SRR2089651 chr5 123482511 123482635 + Annotated LTR|ERVK|RLTR20A3_MM ENSMUSG00000029438.10, Bcl7a ENSMUST00000031391.9, ENSMUST00000117971.2, NR_165268.1, NR_165266.1, NR_165265.1, NM_029850.3 ENCFF001NCP, ENCFF001NCR, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002FAG, ENCFF002FAI, ENCFF059IQN, ENCFF064PBF, ENCFF084DCW, ENCFF089PFT, ENCFF090USB, ENCFF102BWR, ENCFF104LLO, ENCFF106GQS, ENCFF163LPQ, ENCFF345OIF, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF489IGD, ENCFF495YGN, ENCFF696TCH, ENCFF841OXD, ENCFF874ELO, ENCFF883UYA, ENCFF993QUE, ENCFF005GQR, ENCFF013CHH, ENCFF017LOD, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF134HVE, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF173IVH, ENCFF199IRM, ENCFF233IFH, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF270ERO, ENCFF271OHB, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF326UXM, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF429BQZ, ENCFF444YCN, ENCFF446FOZ, ENCFF454ZUS, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510TTU, ENCFF516BTG, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF609KQB, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF686KMX, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF920FVY, ENCFF924LPZ, ENCFF933KQV, ENCFF935LAF, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF975NCY, ENCFF978EQI, ENCFF037GFB, ENCFF172DMS, ENCFF243TPB, ENCFF267KZS, ENCFF334XFS, ENCFF338LFG, ENCFF357QTB, ENCFF476JSK, ENCFF598WAL, ENCFF606XHA, ENCFF673GRZ, ENCFF689ZLL, ENCFF743NNG, ENCFF751QWY, ENCFF830CBI, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF454JTI, ENCFF499CDP, ENCFF499GDC, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF705HQV, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF932SOZ, ENCFF970VKL, SRR15198218, SRR15198219, SRR15198220, SRR15198224, SRR15198225, SRR15198228, SRR2040601, SRR2927113, SRR6904683, SRR6904685 chr5 123557496 123557497 + Predicted SINE|B4|RSINE1 ENSMUSG00000038342.16, Mlxip SRR2089603, SRR2089606, SRR2089607, SRR2089609, SRR2089614, SRR2089619, SRR2089620, SRR2089622, SRR2089633, SRR2089639, SRR2089650, SRR2089651 chr5 123880011 123880012 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000029422.16, Rsrc2 ENCFF084DCW, ENCFF349LIW, ENCFF363XWU, ENCFF570KYE, ENCFF822PGJ, ENCFF013SNI, ENCFF049WBL, ENCFF098TCZ, ENCFF149JXW, ENCFF174EGP, ENCFF184ALY, ENCFF219PCN, ENCFF256UWN, ENCFF261EQP, ENCFF268YSJ, ENCFF292KWK, ENCFF310BWG, ENCFF311MZV, ENCFF346NGU, ENCFF350KYC, ENCFF366CSN, ENCFF382VCK, ENCFF407JTK, ENCFF439HXQ, ENCFF507VMW, ENCFF538ZTW, ENCFF543GNI, ENCFF557JPW, ENCFF699SBZ, ENCFF759HJA, ENCFF859MTL, ENCFF903ULI, ENCFF916BSM, ENCFF939QLN, ENCFF948BDY, ENCFF985NHB chr5 12405753 12405754 - Annotated LTR|ERVL|MT2B1 ENSMUSG00000104941.2, Gm8953 ENSMUST00000198497.2 chr5 125380730 125380777 - Predicted SINE|MIR|MIRb ENSMUSG00000037936.16, Scarb1 DRR091688, DRR091689, DRR091691, DRR091693, DRR091694, DRR091696, DRR091697, SRR10697195, SRR10697200, SRR11428467, SRR11428469, SRR13142118, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR9080665, SRR9080666 chr5 125438236 125438247 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000104932.2, Gm40323 ENSMUST00000200649.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178989, SRR9178991 chr5 125471507 125471508 + Annotated LTR|ERVK|RMER17C ENSMUSG00000121110.1, ENSMUSG00000121110 ENSMUST00000247158.1 chr5 127291385 127291393 - Predicted LTR|ERV1|RMER5 ENSMUSG00000104778.2, Gm43476 DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697201, SRR10697203, SRR11428468, SRR11428470, SRR13142119, SRR15198219, SRR15198224, SRR15198225, SRR2040601, SRR2927113, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr5 129939740 129939741 + Predicted SINE|Alu|B1F1 ENSMUSG00000095789.7, Nupr1l SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643199, SRR6904684, SRR6904685 chr5 130102167 130102168 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000034118.16, Tpst1 ENSMUST00000118993.8, NM_013837.2 ENCFF002ERU chr5 131162677 131162681 - Predicted LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000106710.2, Gm43166 SRR2089609, SRR2089610, SRR2089614, SRR2089616, SRR2089617, SRR2089620, SRR2089622, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089641, SRR2089642, SRR2089643, SRR2089645, SRR2089646, SRR2089650 chr5 134142732 134142733 + Predicted SINE|B2|B3A ENSMUSG00000015944.10, Castor2 SRR2089636, SRR2089637, SRR2089638, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 134143593 134143594 + Predicted SINE|B2|B3A ENSMUSG00000015944.10, Castor2 SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089650, SRR2089651 chr5 134200496 134200497 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000061979.9, Rcc1l SRR2089603, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089620, SRR2089621, SRR2089623, SRR2089635, SRR2089636, SRR2089637, SRR2089641, SRR2089642, SRR2089643, SRR2089646 chr5 134236752 134236784 + Predicted SINE|Alu|B1_Mur4 ENSMUSG00000015942.10, Gtf2ird2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178206, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 134301440 134301441 - Predicted LTR|ERVL|MER88 ENSMUSG00000060261.17, Gtf2i ENCFF002DMZ, ENCFF002FAC, ENCFF455DHP, SRR3178204, SRR3178205, SRR3178206, SRR5643201 chr5 134644921 134645042 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000040751.13, Lat2 ENCFF076CCZ, ENCFF107XGE, ENCFF136POG, ENCFF151QHP, ENCFF221JIC, ENCFF229AIZ, ENCFF234MZC, ENCFF277XPM, ENCFF283XKV, ENCFF304MIZ, ENCFF321BMO, ENCFF330LWU, ENCFF334RGJ, ENCFF349LIW, ENCFF367BBB, ENCFF379JPQ, ENCFF393UZV, ENCFF533CLY, ENCFF540XSD, ENCFF544BEF, ENCFF585YYC, ENCFF589MBR, ENCFF600AGS, ENCFF639RWJ, ENCFF654BXL, ENCFF671ERF, ENCFF672HUA, ENCFF698LQF, ENCFF710DAI, ENCFF723KAG, ENCFF723QIC, ENCFF745HSV, ENCFF764TGO, ENCFF784LWT, ENCFF794FBC, ENCFF812CUD, ENCFF844QDN, ENCFF868XLZ, ENCFF884TJE, ENCFF902GVX, ENCFF907HVO, ENCFF910ESY, ENCFF917RNE, ENCFF934ULS, ENCFF941QCZ, ENCFF972IVS, ENCFF234LUQ, ENCFF359GCY, ENCFF609ZVL, ENCFF003GJV, ENCFF009AVK, ENCFF030IFE, ENCFF039PJR, ENCFF045YRV, ENCFF087OKI, ENCFF087XKQ, ENCFF090EUZ, ENCFF095NMU, ENCFF107YGR, ENCFF108JLQ, ENCFF117ZMM, ENCFF127DCC, ENCFF142PTA, ENCFF155GUC, ENCFF163BDT, ENCFF175LCC, ENCFF208BJY, ENCFF223SMG, ENCFF233RGQ, ENCFF249LSC, ENCFF257EYD, ENCFF261EQP, ENCFF267VBU, ENCFF285NFL, ENCFF335UNU, ENCFF347EUO, ENCFF350KYC, ENCFF357AGP, ENCFF366IEQ, ENCFF378TYU, ENCFF386HCR, ENCFF394AUR, ENCFF406NLL, ENCFF426ZCK, ENCFF427YDU, ENCFF439HXQ, ENCFF453MPR, ENCFF470RDW, ENCFF486BJT, ENCFF486GBM, ENCFF516QKR, ENCFF517BAY, ENCFF527XBQ, ENCFF536ZFC, ENCFF537DSI, ENCFF549IDH, ENCFF557JPW, ENCFF558UDY, ENCFF559QXN, ENCFF565CON, ENCFF578MOR, ENCFF580KHN, ENCFF584ZUK, ENCFF585CYT, ENCFF601JTS, ENCFF611QZE, ENCFF612KDP, ENCFF651HEM, ENCFF658NHH, ENCFF663TDQ, ENCFF669PMR, ENCFF673BPE, ENCFF680OWA, ENCFF687STH, ENCFF696VQM, ENCFF700IPC, ENCFF735BVR, ENCFF740TFX, ENCFF746ZCS, ENCFF750IZJ, ENCFF753HNF, ENCFF758BKM, ENCFF759HJA, ENCFF786BUI, ENCFF804EWD, ENCFF812QQI, ENCFF814TTQ, ENCFF816CPX, ENCFF817NCH, ENCFF825JNK, ENCFF840EFC, ENCFF847IGW, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF859MTL, ENCFF885ZAO, ENCFF899EJT, ENCFF907KCF, ENCFF934QGX, ENCFF936LNA, ENCFF937KFC, ENCFF939QLN, ENCFF944RHJ, ENCFF976SMI, ENCFF994JUO, ENCFF062GNP, ENCFF178HDG, ENCFF349AIG, ENCFF477YHR, ENCFF854IBU chr5 135236990 135236991 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000002748.8, Baz1b ENCFF002EZY, ENCFF086ZMV, ENCFF421ACV, ENCFF462ABU, ENCFF570KYE, ENCFF764ZUI, ENCFF888LGA, ENCFF951UXE, ENCFF039PJR, ENCFF067OYG, ENCFF087XKQ, ENCFF098AYQ, ENCFF197OUM, ENCFF198XFF, ENCFF210BVU, ENCFF254VIN, ENCFF277JGD, ENCFF346NGU, ENCFF439HXQ, ENCFF498OHV, ENCFF507WIK, ENCFF538AIM, ENCFF572SQL, ENCFF611QZE, ENCFF673BPE, ENCFF673SLO, ENCFF726YTS, ENCFF758JNE, ENCFF794MMU, ENCFF816CPX, ENCFF829HAB, ENCFF955WXI, ENCFF994JUO chr5 135380278 135380279 - Predicted SINE|B4|ID_B1 ENSMUSG00000040013.12, Fkbp6 DRR091693, DRR091694, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697199, SRR10697203, SRR11428470, SRR13142118, SRR15198218, SRR15198219, SRR15198220, SRR15198224, SRR2040601, SRR2927112, SRR6338004, SRR9080666 chr5 136978154 136978155 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000019054.14, Fis1 ENCFF696TCH, ENCFF005GQR, ENCFF013CHH, ENCFF065TCZ, ENCFF500QZK, ENCFF510TTU, ENCFF533DWD, ENCFF647TTU, ENCFF499CDP, ENCFF932SOZ, ENCFF970VKL chr5 137198769 137198798 + Predicted LTR|ERVL-MaLR|MLT1A ENSMUSG00000106466.2, Gm40348 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091696, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr5 138262521 138262622 - Predicted SINE|B4|ID_B1 ENSMUSG00000036948.18, Trappc14 ENCFF005NBP, ENCFF023RRS, ENCFF027IIP, ENCFF074HTO, ENCFF074HUJ, ENCFF083BIG, ENCFF107XGE, ENCFF147GLI, ENCFF151QHP, ENCFF160HKC, ENCFF168WHQ, ENCFF212JFB, ENCFF269UZL, ENCFF284OMO, ENCFF295SYY, ENCFF307VAF, ENCFF313ERY, ENCFF319INV, ENCFF345OIF, ENCFF363CYZ, ENCFF367BBB, ENCFF385MVU, ENCFF443PSO, ENCFF453XOG, ENCFF460NGS, ENCFF462ABU, ENCFF486NGU, ENCFF521UGJ, ENCFF524EDD, ENCFF533NLR, ENCFF540XSD, ENCFF544BEF, ENCFF554PUC, ENCFF585YYC, ENCFF605IFN, ENCFF621PKT, ENCFF698LQF, ENCFF710DAI, ENCFF723KAG, ENCFF745HSV, ENCFF755IDE, ENCFF764EJV, ENCFF775BPV, ENCFF783MLO, ENCFF787LWL, ENCFF812CUD, ENCFF863RVB, ENCFF874ELO, ENCFF876MJS, ENCFF884TJE, ENCFF902GVX, ENCFF907HVO, ENCFF912RLS, ENCFF925ONP, ENCFF931DDH, ENCFF942WIP, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF972IVS, ENCFF269SRJ, ENCFF744OEI, ENCFF012HVN, ENCFF016CHX, ENCFF037LEJ, ENCFF077YZF, ENCFF126WDH, ENCFF134VWD, ENCFF144EDQ, ENCFF178ZXW, ENCFF185TRT, ENCFF210BVU, ENCFF237HDL, ENCFF257EYD, ENCFF264PYB, ENCFF267VBU, ENCFF271RFU, ENCFF285NFL, ENCFF306FQJ, ENCFF308WGP, ENCFF310WDZ, ENCFF332RWQ, ENCFF334XFS, ENCFF338DAA, ENCFF347EUO, ENCFF350PHR, ENCFF357AGP, ENCFF358UHV, ENCFF366IEQ, ENCFF376PQU, ENCFF403CRC, ENCFF404HLB, ENCFF422CQE, ENCFF423GTP, ENCFF460FON, ENCFF527XBQ, ENCFF587HBC, ENCFF591WVP, ENCFF598BFX, ENCFF644GYU, ENCFF646GBS, ENCFF658NHH, ENCFF661UPO, ENCFF678CRA, ENCFF695XIY, ENCFF696TTO, ENCFF711XWR, ENCFF741PLM, ENCFF758BKM, ENCFF789AOM, ENCFF794GVC, ENCFF804EWD, ENCFF848UMJ, ENCFF856UMI, ENCFF898CAY, ENCFF903KDM, ENCFF906CJJ, ENCFF949QCF, ENCFF970PLY, ENCFF974XWJ, ENCFF997QQG, DRR091696 chr5 139307240 139307241 + Predicted LINE|L1|L1MB3 ENSMUSG00002076025.1, Gm56242 SRR2089636, SRR2089637, SRR2089638, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650 chr5 140318309 140318310 - Predicted LINE|L1|L1MdA_IV ENSMUSG00000029557.8, Mrm2 ENCFF076CCZ, ENCFF138TOM, ENCFF319INV, ENCFF348VIH, ENCFF874ELO, ENCFF884DLS, ENCFF946AGD, ENCFF993QUE, ENCFF167GWU, ENCFF285NFL, ENCFF422CQE, ENCFF477MBL, ENCFF632HDE, ENCFF952EQQ, ENCFF186VNL chr5 141328078 141328080 + Predicted SINE|Alu|B1_Mur3 ENSMUSG00000039683.17, Sdk1 SRR10697203, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198218, SRR15198219, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927113, SRR6338004, SRR9178985 chr5 142135731 142135732 + Predicted SINE|ID|ID4 ENSMUSG00000039683.17, Sdk1 SRR2089605, SRR2089606, SRR2089609, SRR2089610, SRR2089615, SRR2089616, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089639, SRR2089640, SRR2089642, SRR2089644, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 142420447 142420467 + Predicted SINE|Alu|PB1D10 ENSMUSG00000056493.10, Foxk1 DRR091688, DRR091690, DRR091691, DRR091698, DRR091699, SRR15198217, SRR15198218, SRR15198220, SRR15198223, SRR15198226, SRR15198227, SRR2040601, SRR9178976, SRR9178979, SRR9178982, SRR9178985, SRR9178986 chr5 143300818 143300819 - Annotated DNA|hAT-Charlie|Charlie17b ENSMUSG00000039244.11, Ints15 ENSMUST00000159406.8 ENCFF001RTF, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF102BWR, ENCFF106GQS, ENCFF437AJW, ENCFF450WAV, ENCFF489IGD, ENCFF575RUC, ENCFF802GAN, ENCFF013CHH, ENCFF251WZA, ENCFF315OOH, ENCFF442FJC, ENCFF654AEJ, ENCFF744OEI, ENCFF804UQS, ENCFF840XYZ, ENCFF845NXM, ENCFF061WTN, ENCFF120SMK, ENCFF194DAO, ENCFF302MXO, ENCFF691DJE, ENCFF871CMC, ENCFF720MPJ, DRR091688, DRR091689, DRR091690, DRR091694, DRR091699, SRR13142118, SRR13142120 chr5 143636988 143637021 + Annotated LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000018001.19, Cyth3 ENSMUST00000110727.2, NM_001163548.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR6904683, SRR6904685, SRR9080662, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 143987426 143987427 - Annotated LTR|ERVL|MT2B2 NM_033039.3 chr5 144698627 144698628 - Annotated SINE|B4|B4A ENSMUSG00000043388.9, Tmem130 ENSMUST00000197254.2 ENCFF002EZY, ENCFF002FAI, ENCFF148XRK, ENCFF296VFB, ENCFF379TZT, ENCFF500QZK, ENCFF647TTU, ENCFF657FNE, ENCFF725ATS, ENCFF860XMD, ENCFF886BRO, ENCFF962OCF, ENCFF499CDP, ENCFF911OIZ chr5 146230658 146230659 + Predicted SINE|Alu|B1_Mur3 ENSMUSG00000029635.16, Cdk8 SRR2089603, SRR2089605, SRR2089609, SRR2089619, SRR2089629, SRR2089635, SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 146428517 146428518 + Predicted LINE|L2|L2 ENSMUSG00000079093.3, ENSMUSG00000096527.6, 4930449I24Rik, Gm6370 DRR091696, DRR091699, SRR11428467, SRR11428468, SRR2927111, SRR6338004, SRR9178976, SRR9178979, SRR9178987, SRR9178990, SRR9178992 chr5 146439552 146439555 + Predicted LINE|L2|L2 ENSMUSG00000041505.16, ENSMUSG00000079093.3, ENSMUSG00000096527.6, Gm3402, 4930449I24Rik, Gm6370 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR13142121, SRR13142122, SRR15198217, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR2927111, SRR2927113, SRR6338004, SRR9080666, SRR9178982, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991 chr5 146458885 146458886 + Predicted LTR|ERVK|RLTR12A ENSMUSG00000079091.2, Gm3404 SRR2089616, SRR2089622, SRR2089634, SRR2089649 chr5 146459071 146459072 + Predicted LTR|ERV1|MLTR14 ENSMUSG00000079091.2, Gm3404 SRR2089619, SRR2089622, SRR2089623, SRR2089633, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 146459273 146459274 + Predicted LTR|ERV1|MLTR14 ENSMUSG00000079091.2, Gm3404 SRR2089606, SRR2089617, SRR2089618, SRR2089620, SRR2089631, SRR2089632, SRR2089645, SRR2089646 chr5 146470676 146470678 + Predicted LTR|ERVK|RLTR12A ENSMUSG00000096664.8, Gm3409 SRR2089603, SRR2089622, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 146471489 146471490 + Predicted LTR|ERV1|MLTR14 ENSMUSG00000096664.8, Gm3409 SRR2089606, SRR2089619, SRR2089631, SRR2089635, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089648, SRR2089649, SRR2089651 chr5 146482593 146482594 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000095557.8, Gm3415 SRR2089604, SRR2089606, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089622, SRR2089623, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 147355411 147355431 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000106820.3, D5Ertd605e ENSMUST00000201128.3, NR_033625.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF001RTJ, ENCFF089PFT, ENCFF437AJW, ENCFF450WAV, ENCFF521IDK, ENCFF696TCH chr5 149029202 149029203 - Predicted LTR|ERVL|RMER10A ENSMUSG00000066551.13, Hmgb1 SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198227 chr5 149065394 149065395 + Annotated LTR|ERVK|RMER19A ENSMUSG00000107133.2, Gm42787 ENSMUST00000200879.2 chr5 149172067 149172095 + Annotated LTR|ERVL-MaLR|MLT1F ENSMUSG00000100783.3, 2310047D07Rik ENSMUST00000242946.1, ENSMUST00000242212.1, ENSMUST00000244559.1, ENSMUST00000245001.1 ENCFF002FAE chr5 149505595 149505596 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000029657.16, Hsph1 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089610, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089640, SRR2089641, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 150447713 150447740 - Predicted SINE|Alu|B1F2 ENSMUSG00000120852.1, ENSMUSG00000120852 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 150489877 150489906 - Annotated LINE|L1|L1MC4a ENSMUSG00000106764.2, Gm42529 ENSMUST00000201843.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178204, SRR6338004, SRR6904683, SRR6904684, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 150490012 150490013 - Predicted LINE|L1|L1MC4a ENSMUSG00000106764.2, Gm42529 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 151323574 151323610 + Annotated LTR|ERVK|RLTR51B_Mm ENSMUSG00000097321.7, 1700028E10Rik ENSMUST00000202216.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR9080662, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 16386285 16386305 + Predicted LTR|ERV1|RLTR41 ENSMUSG00000040118.16, Cacna2d1 ENCFF033ZUH, ENCFF101BDM, ENCFF143BIC, ENCFF223BXU, ENCFF269WEZ, ENCFF284AEN, ENCFF315OOH, ENCFF364LFJ, ENCFF510LAE, ENCFF521NCL, ENCFF567AFB, ENCFF609KQB, ENCFF651SDJ, ENCFF657OJR, ENCFF670FEL, ENCFF683CWD, ENCFF728TXU, ENCFF737OUQ, ENCFF834VIK, ENCFF845NXM, ENCFF862FYE, ENCFF923VUD, ENCFF933MOZ, ENCFF943XKB, ENCFF242SVY, ENCFF366CUG, ENCFF454JTI, ENCFF481CFU, ENCFF555BQD chr5 18692684 18692685 - Predicted LTR|ERVK|RLTR22_Mur ENSMUSG00000104718.2, Gm31752 SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228 chr5 18700279 18700317 - Annotated LTR|ERVK|RMER17B NR_166583.1 DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr5 20112743 20112764 + Annotated LTR|ERVK|RLTR31D_MM ENSMUSG00000040003.19, Magi2 ENSMUST00000115267.7 ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005GQR, ENCFF013CHH, ENCFF065LOT, ENCFF065TCZ, ENCFF148XRK, ENCFF156YWS, ENCFF199IRM, ENCFF222GPK, ENCFF233IFH, ENCFF247QZW, ENCFF269SRJ, ENCFF271OHB, ENCFF296VFB, ENCFF308FEA, ENCFF326UXM, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF374YTS, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF510TTU, ENCFF533DWD, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF721BNO, ENCFF725ATS, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF809FPA, ENCFF818BAS, ENCFF831ISX, ENCFF854MWX, ENCFF860XMD, ENCFF886BRO, ENCFF914YDJ, ENCFF924LPZ, ENCFF962OCF, ENCFF967NOO, ENCFF008XVO, ENCFF075EMK, ENCFF119IHT, ENCFF269AST, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF525QIM, ENCFF670VVN, ENCFF749STK, ENCFF803OIY, ENCFF847LGC, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL chr5 21157883 21157884 - Predicted SINE|Alu|B1_Mm ENSMUSG00000039968.10, Rsbn1l ENCFF022FSI, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF090USB, ENCFF121BYS, ENCFF125HRQ, ENCFF126HTW, ENCFF139MHN, ENCFF140VGY, ENCFF297BEX, ENCFF297CWJ, ENCFF345OIF, ENCFF381JXP, ENCFF392TDB, ENCFF432ZLQ, ENCFF480BVV, ENCFF527VIY, ENCFF564OKH, ENCFF623BKO, ENCFF625JLB, ENCFF683RFI, ENCFF711WAC, ENCFF775RSS, ENCFF808XFI, ENCFF813ZJI, ENCFF937GBW, ENCFF223BXU, ENCFF364LFJ, ENCFF377UGQ, ENCFF657OJR, ENCFF768ZCF, ENCFF785TEQ, ENCFF002SZY, ENCFF015JJB, ENCFF023TPS, ENCFF037IZV, ENCFF050CMF, ENCFF056UGH, ENCFF073RJJ, ENCFF087IUJ, ENCFF103SQR, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF235HER, ENCFF243LBQ, ENCFF279EVY, ENCFF299ENO, ENCFF332IRR, ENCFF341YZB, ENCFF380LXU, ENCFF382VCK, ENCFF426FAF, ENCFF458EUS, ENCFF482VRF, ENCFF505WKA, ENCFF512XKX, ENCFF543PXT, ENCFF609WDV, ENCFF614WCH, ENCFF615ULR, ENCFF633QXI, ENCFF680WIN, ENCFF696XZL, ENCFF712EKU, ENCFF713JXV, ENCFF743NNG, ENCFF764AQK, ENCFF791AUB, ENCFF801SNQ, ENCFF811ZQO, ENCFF838BEV, ENCFF860SGX, ENCFF875BUD, ENCFF900AIQ, ENCFF946LMX, ENCFF953POL, ENCFF953WBM, ENCFF956ZKG, ENCFF966VVA, ENCFF999ZYF, DRR091697, SRR10697197, SRR10697201, SRR10697202, SRR11428468, SRR11428469, SRR15198219, SRR15198220, SRR15198221, SRR15198225, SRR15198227, SRR9178977, SRR9178979, SRR9178981, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr5 21157950 21158057 - Predicted SINE|Alu|B1_Mm ENSMUSG00000039968.10, Rsbn1l ENCFF001NCP, ENCFF022FSI, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF090USB, ENCFF116MYR, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF139MHN, ENCFF140VGY, ENCFF186RYS, ENCFF274WSX, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF345OIF, ENCFF381JXP, ENCFF392TDB, ENCFF432ZLQ, ENCFF445BBH, ENCFF480BVV, ENCFF482MUH, ENCFF527VIY, ENCFF564OKH, ENCFF623BKO, ENCFF625JLB, ENCFF683RFI, ENCFF711WAC, ENCFF775RSS, ENCFF808XFI, ENCFF813ZJI, ENCFF880FYC, ENCFF937GBW, ENCFF985BLV, ENCFF991TPB, ENCFF143BIC, ENCFF151YNV, ENCFF223BXU, ENCFF236TUH, ENCFF245ZOR, ENCFF269SRJ, ENCFF315OOH, ENCFF326UXM, ENCFF364LFJ, ENCFF369YLA, ENCFF377UGQ, ENCFF390NKP, ENCFF444YCN, ENCFF487DYP, ENCFF510LAE, ENCFF592GVA, ENCFF654AEJ, ENCFF704WWK, ENCFF721ASG, ENCFF768ZCF, ENCFF775SSI, ENCFF785TEQ, ENCFF952BCB, ENCFF962OCF, ENCFF002SZY, ENCFF015JJB, ENCFF023TPS, ENCFF037IZV, ENCFF050CMF, ENCFF056UGH, ENCFF057FFG, ENCFF073RJJ, ENCFF103SQR, ENCFF116QKZ, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF172DMS, ENCFF178ZXW, ENCFF235HER, ENCFF243TPB, ENCFF278JAU, ENCFF279EVY, ENCFF299ENO, ENCFF302MXO, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF380LXU, ENCFF426FAF, ENCFF458EUS, ENCFF482VRF, ENCFF497GLK, ENCFF505WKA, ENCFF512XKX, ENCFF543PXT, ENCFF598WAL, ENCFF609WDV, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF633QXI, ENCFF635XED, ENCFF644EGG, ENCFF680WIN, ENCFF691DJE, ENCFF696XZL, ENCFF713JXV, ENCFF727EPG, ENCFF743NNG, ENCFF751QWY, ENCFF801SNQ, ENCFF809QBQ, ENCFF811ZQO, ENCFF838BEV, ENCFF860SGX, ENCFF875BUD, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF953POL, ENCFF953WBM, ENCFF956ZKG, ENCFF959CWA, ENCFF966VVA, ENCFF999ZYF, ENCFF008XVO, ENCFF423TSB, ENCFF827NYZ, DRR091695, DRR091697, SRR10697197, SRR10697200, SRR10697201, SRR10697202, SRR11428469, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 21158321 21158444 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000039968.10, Rsbn1l ENCFF001NDA, ENCFF106RGV, ENCFF138QRF, ENCFF142CUS, ENCFF206EGD, ENCFF214IUN, ENCFF261OTH, ENCFF296ASE, ENCFF310HPH, ENCFF351JWR, ENCFF385MVU, ENCFF470MXU, ENCFF489VZI, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF564YPB, ENCFF643VPC, ENCFF707QJV, ENCFF813GGJ, ENCFF823PZU, ENCFF841OXD, ENCFF851ESH, ENCFF878SQO, ENCFF906FNQ, ENCFF907HVO, ENCFF934ZAP, ENCFF946AGD, ENCFF956WVJ, ENCFF960LQP, ENCFF013HYW, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF084CWD, ENCFF101BDM, ENCFF148XRK, ENCFF170XMM, ENCFF251WZA, ENCFF296VFB, ENCFF335ZSA, ENCFF348FTH, ENCFF374YTS, ENCFF377LAC, ENCFF391UFN, ENCFF448TTG, ENCFF468AKL, ENCFF484HRX, ENCFF533DWD, ENCFF573UIH, ENCFF588DUN, ENCFF595WXV, ENCFF657FNE, ENCFF657UWH, ENCFF670FEL, ENCFF686KMX, ENCFF744OEI, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF854MWX, ENCFF923VUD, ENCFF004AEL, ENCFF027GCQ, ENCFF043DTH, ENCFF052RNG, ENCFF054EOL, ENCFF066MTU, ENCFF088PZI, ENCFF090EUZ, ENCFF095NMU, ENCFF111MWQ, ENCFF118YHP, ENCFF120SMK, ENCFF142PTA, ENCFF150HVU, ENCFF158HQO, ENCFF163DKN, ENCFF163GEC, ENCFF167EHX, ENCFF167GWU, ENCFF174EGP, ENCFF199AAD, ENCFF203EWG, ENCFF255XDN, ENCFF328TJH, ENCFF348RRM, ENCFF357QTB, ENCFF359DNK, ENCFF376PQU, ENCFF390ZZH, ENCFF399YLV, ENCFF406NLL, ENCFF408FFP, ENCFF422ZNC, ENCFF426ETE, ENCFF440IAL, ENCFF469JWF, ENCFF478YRJ, ENCFF487OHM, ENCFF497KLL, ENCFF527XBQ, ENCFF578YPJ, ENCFF587HBC, ENCFF591WVP, ENCFF596INO, ENCFF597BNT, ENCFF606XHA, ENCFF698WQO, ENCFF735BVR, ENCFF737VKP, ENCFF741PLM, ENCFF781MKK, ENCFF794GVC, ENCFF804EWD, ENCFF854LJN, ENCFF863LMG, ENCFF872SFD, ENCFF881DTW, ENCFF886UAF, ENCFF904KCQ, ENCFF948YKH, ENCFF952EQQ, ENCFF960QTC, ENCFF962ZCT, ENCFF964HGL, ENCFF970LRH, ENCFF998BIQ, ENCFF075EMK, ENCFF199IWW, ENCFF242SVY, ENCFF277QHC, ENCFF344OJQ, ENCFF399XUL, ENCFF510AYI, ENCFF510IAG, ENCFF641WPY, ENCFF715CAJ, ENCFF716YKR, ENCFF728WJB, ENCFF847LGC, ENCFF932SOZ, DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697203, SRR11428467, SRR11428470, SRR13142120, SRR15198223, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080666, SRR9178983 chr5 21643699 21643700 + Predicted LINE|L2|L2b ENSMUSG00000047221.6, Fam185a ENCFF002FAA, ENCFF310HPH, ENCFF502ANK chr5 23305564 23305571 + Predicted SINE|B4|B4A ENSMUSG00000106379.2, Lhfpl3 DRR091688, DRR091693, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178986, SRR9178989, SRR9178991 chr5 23889597 23889649 - Annotated LTR|ERVL-MaLR|MLT1F1 ENSMUSG00000062604.12, Srpk2 ENSMUST00000197985.5, ENSMUST00000198549.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 24127663 24127708 - Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000120302.1, ENSMUSG00000120302 ENSMUST00000242423.1, ENSMUST00000247315.1, ENSMUST00000246170.1 ENCFF575RUC, ENCFF793IYH chr5 24598661 24598675 + Annotated SINE|Alu|B1F1 ENSMUSG00000028973.19, Abcb8 ENSMUST00000138168.3, ENSMUST00000115077.8 ENCFF001RTD, ENCFF591WVP chr5 24649684 24649685 - Predicted SINE|MIR|MIRc ENSMUSG00000028959.15, Fastk ENCFF002ERU, ENCFF086ZMV, ENCFF332ZPO, ENCFF426QFT, ENCFF502ANK, ENCFF533CLY, ENCFF570KYE, ENCFF672HUA, ENCFF783MLO, ENCFF006JHA, ENCFF197OUM, ENCFF261EQP, ENCFF335UNU, ENCFF397ZQU, ENCFF498OHV, ENCFF646GBS, ENCFF669PMR, DRR091697 chr5 24657284 24657445 + Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000023353.15, Agap3 ENSMUST00000199647.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF002ERU, ENCFF002ERW, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAI, ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF051PTY, ENCFF056GXQ, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF083BIG, ENCFF084PUC, ENCFF086ZMV, ENCFF090USB, ENCFF092YWY, ENCFF094CCP, ENCFF102AMK, ENCFF105KSL, ENCFF106RGV, ENCFF108UNS, ENCFF114PSQ, ENCFF126HTW, ENCFF130KZZ, ENCFF133PEB, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF162UVS, ENCFF163LPQ, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212JFB, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF251TMY, ENCFF261OTH, ENCFF262WAE, ENCFF264DCN, ENCFF273CJD, ENCFF274WSX, ENCFF283XKV, ENCFF287KDR, ENCFF289WHW, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF307VAF, ENCFF308LTO, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330IYN, ENCFF344ILW, ENCFF344LNZ, ENCFF347HAB, ENCFF347UAC, ENCFF348VIH, ENCFF351JWR, ENCFF372GOY, ENCFF375EMG, ENCFF376MQF, ENCFF385GUJ, ENCFF385MVU, ENCFF392TDB, ENCFF393YET, ENCFF400XLQ, ENCFF403ORF, ENCFF404PYQ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF422ATU, ENCFF426QFT, ENCFF432ZLQ, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF453XOG, ENCFF482MUH, ENCFF489IGD, ENCFF491XRO, ENCFF494YXM, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF519IZA, ENCFF522VLI, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF535YBP, ENCFF552NWL, ENCFF560YXX, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF581WWO, ENCFF585YYC, ENCFF595GFM, ENCFF600AGS, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF667FDW, ENCFF670YKO, ENCFF671ERF, ENCFF691URX, ENCFF698LQF, ENCFF705JRV, ENCFF707QJV, ENCFF711WAC, ENCFF723KAG, ENCFF723QIC, ENCFF727WWV, ENCFF743QXJ, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF755IDE, ENCFF771LLL, ENCFF773VFS, ENCFF775RSS, ENCFF780TUN, ENCFF783MLO, ENCFF787LWL, ENCFF792XYG, ENCFF793CWJ, ENCFF793STU, ENCFF802GAN, ENCFF808XFI, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844KCR, ENCFF844QDN, ENCFF849GVQ, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF874ELO, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF888LGA, ENCFF896IIZ, ENCFF902GVX, ENCFF906FNQ, ENCFF907HVO, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF937GBW, ENCFF941QCZ, ENCFF942WIP, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF960LQP, ENCFF970XZM, ENCFF982BLT, ENCFF991TPB, ENCFF993QUE, ENCFF994BOT, ENCFF023MKT, ENCFF084CWD, ENCFF274ESJ, ENCFF442FJC, ENCFF834VIK, ENCFF862FYE, ENCFF969WLB, ENCFF002SZY, ENCFF004AEL, ENCFF012HVN, ENCFF014CMK, ENCFF016CHX, ENCFF023TPS, ENCFF024CUG, ENCFF030IFE, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037LEJ, ENCFF039DES, ENCFF041PJP, ENCFF043DTH, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF065ZIE, ENCFF068CQU, ENCFF070YMI, ENCFF077CYB, ENCFF077YZF, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF089SWU, ENCFF098TCZ, ENCFF108JLQ, ENCFF111MWQ, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF127KHN, ENCFF131VEF, ENCFF133KGZ, ENCFF136DUH, ENCFF136TYP, ENCFF140WZW, ENCFF143RTP, ENCFF144EDQ, ENCFF148BPZ, ENCFF149DFF, ENCFF158HQO, ENCFF163BDT, ENCFF163GEC, ENCFF166UTY, ENCFF170KWW, ENCFF177LXI, ENCFF178ZXW, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF207HZS, ENCFF209LBA, ENCFF210BVU, ENCFF219PCN, ENCFF221ZQB, ENCFF222MKT, ENCFF228CMT, ENCFF229CPV, ENCFF237HDL, ENCFF237JCE, ENCFF240OIM, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF254TFB, ENCFF255ESE, ENCFF256UWN, ENCFF260UQJ, ENCFF264PYB, ENCFF268ZHE, ENCFF275HRX, ENCFF275TCB, ENCFF276OPJ, ENCFF277JGD, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF291SCS, ENCFF292KWK, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF302KQL, ENCFF302MXO, ENCFF303BIV, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF313IFI, ENCFF332IRR, ENCFF343MIX, ENCFF348RRM, ENCFF350PHR, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF370VOV, ENCFF371ZDG, ENCFF376PQU, ENCFF378TYU, ENCFF386HCR, ENCFF387BVS, ENCFF390AUP, ENCFF397MUI, ENCFF399TOF, ENCFF399YLV, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF420RGI, ENCFF421DHQ, ENCFF422CQE, ENCFF422ZNC, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429ZEH, ENCFF430ERW, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF454DOT, ENCFF456GLS, ENCFF459TYQ, ENCFF466RIS, ENCFF476JSK, ENCFF478BEL, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF486BJT, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF498OHV, ENCFF505YPK, ENCFF507VMW, ENCFF507WIK, ENCFF517BAY, ENCFF519AKK, ENCFF527XBQ, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF561CZI, ENCFF563FUC, ENCFF573WSG, ENCFF576EOD, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF594GIP, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598WAL, ENCFF609WRW, ENCFF611OFH, ENCFF613YNK, ENCFF618PVF, ENCFF632HDE, ENCFF636SOT, ENCFF643SBQ, ENCFF644EGG, ENCFF646GBS, ENCFF647RUH, ENCFF655CUI, ENCFF656DRS, ENCFF667RGF, ENCFF668SQN, ENCFF672WYO, ENCFF673SLO, ENCFF680WIN, ENCFF689RQK, ENCFF696VQM, ENCFF696XZL, ENCFF705CES, ENCFF712BKP, ENCFF713JXV, ENCFF724VJN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF754VQW, ENCFF758BKM, ENCFF758JNE, ENCFF764AQK, ENCFF765AQX, ENCFF765UBL, ENCFF766UJI, ENCFF770WIT, ENCFF779MMO, ENCFF780UQU, ENCFF781XUM, ENCFF786BUI, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF794MMU, ENCFF796TQV, ENCFF801SNQ, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF814PHK, ENCFF817HZQ, ENCFF817NCH, ENCFF820JMO, ENCFF821HAZ, ENCFF840DKD, ENCFF843WRN, ENCFF848UMJ, ENCFF853PNO, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF861RRQ, ENCFF867FTP, ENCFF869MFM, ENCFF871CMC, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF883APB, ENCFF896XAZ, ENCFF898CAY, ENCFF903KDM, ENCFF903ULI, ENCFF904KCQ, ENCFF906CJJ, ENCFF916JWW, ENCFF926FRX, ENCFF926IDV, ENCFF928YDQ, ENCFF934QGX, ENCFF938CNS, ENCFF938XTE, ENCFF946LMX, ENCFF949QCF, ENCFF951PCM, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF953WBM, ENCFF955WXI, ENCFF956ZKG, ENCFF958BIE, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974KKD, ENCFF986DZE, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF, ENCFF186VNL, ENCFF248ELC, ENCFF499GDC, ENCFF653QJY, ENCFF827NYZ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR5643200, SRR9080664, SRR9080665, SRR9178978, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178992 chr5 24850442 24850457 + Annotated LTR|ERVL-MaLR|ORR1G ENSMUSG00000038165.9, 1700022A21Rik ENSMUST00000182910.2, NR_003953.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 25307959 25307961 - Predicted SINE|Alu|PB1D9 ENSMUSG00000028944.15, Prkag2 ENCFF056GXQ, ENCFF064PBF, ENCFF114PSQ, ENCFF581WWO, ENCFF745HSV, ENCFF828WIK, ENCFF913CFN, ENCFF917RNE, ENCFF924VRI, ENCFF985BLV, ENCFF005GQR, ENCFF013CHH, ENCFF377LAC, ENCFF533DWD, ENCFF651SDJ, ENCFF657OJR, ENCFF670FEL, ENCFF728TXU, ENCFF838YLT, ENCFF052RNG, ENCFF765AQX, ENCFF306ADU, ENCFF670VVN, ENCFF932SOZ chr5 27258955 27258956 + Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000061576.16, Dpp6 SRR13142120, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198227, SRR15198228, SRR2040601, SRR9178982 chr5 27997090 27997129 - Predicted SINE|B2|B3 ENSMUSG00000002221.12, Paxip1 ENCFF236TUH, ENCFF430ERW, DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 29570204 29570205 - Predicted LINE|L1|L1MA9 ENSMUSG00000010721.16, Lmbr1 ENCFF002EZW, ENCFF002FAC, DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR11428469, SRR11428470, SRR13142120, SRR13142121, SRR13142123, SRR15198222, SRR2927113, SRR6338004, SRR9080663, SRR9080664, SRR9080666, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr5 30246179 30246180 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000105439.2, A230098N10Rik SRR10697196, SRR10697200, SRR10697202, SRR13142118, SRR15198223, SRR15198227, SRR15198228, SRR9178978 chr5 30710674 30710675 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000053194.3, Cib4 ENCFF251WZA, ENCFF670FEL, ENCFF728TXU, ENCFF912MUD, ENCFF555BQD chr5 30827037 30827038 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000029177.10, Cenpa ENCFF002DNB, ENCFF002FAA, ENCFF002FAC, ENCFF002FAG, ENCFF048FGD, ENCFF885AJK, ENCFF049SEE, ENCFF302KQL, ENCFF371ZDG, ENCFF450CUC chr5 31116436 31116437 - Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000045302.14, Preb ENCFF273TLO, ENCFF502ANK, ENCFF186NDY, ENCFF334XFS, ENCFF512LAN, ENCFF782CNW chr5 32135686 32135687 - Predicted LTR|ERVL-MaLR|MLT1E1A ENSMUSG00000106894.2, Gm17130 SRR2089604, SRR2089606, SRR2089622, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 33021277 33021388 + Predicted SINE|MIR|MIRc ENSMUSG00000037426.19, Depdc5 ENCFF040EEJ, ENCFF051PTY, ENCFF102BWR, ENCFF105KSL, ENCFF115KZV, ENCFF138QRF, ENCFF178ZVU, ENCFF326TQL, ENCFF327MSM, ENCFF330LWU, ENCFF426QFT, ENCFF489IGD, ENCFF711WAC, ENCFF858CTQ, ENCFF910ESY, ENCFF946AGD, ENCFF013HYW, ENCFF084CWD, ENCFF134HVE, ENCFF156YWS, ENCFF222GPK, ENCFF234LUQ, ENCFF274ESJ, ENCFF326UXM, ENCFF335ZSA, ENCFF348FTH, ENCFF364LFJ, ENCFF374YTS, ENCFF408NBX, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF532UKS, ENCFF587VDB, ENCFF654AEJ, ENCFF657UWH, ENCFF694NRG, ENCFF714CKE, ENCFF818BAS, ENCFF826RUZ, ENCFF854KNE, ENCFF868WEJ, ENCFF912MUD, ENCFF914YDJ, ENCFF923VUD, ENCFF933MOZ, ENCFF962FIU, ENCFF962OCF, ENCFF967NOO, ENCFF970VKB, ENCFF037GFB, ENCFF156ZQH, ENCFF254TFB, ENCFF255ESE, ENCFF286GUQ, ENCFF297PPT, ENCFF306FQJ, ENCFF417OEG, ENCFF429ZEH, ENCFF437QAE, ENCFF477MBL, ENCFF478YRJ, ENCFF486BJT, ENCFF498OHV, ENCFF505YPK, ENCFF584ZUK, ENCFF598PMW, ENCFF743NNG, ENCFF840DKD, ENCFF843WRN, ENCFF853PNO, ENCFF869MFM, ENCFF952EQQ, ENCFF956ZKG, ENCFF996WVL, ENCFF008XVO, ENCFF062GNP, ENCFF186VNL, ENCFF399XUL, ENCFF499CDP, ENCFF510IAG, ENCFF525QIM, ENCFF574YMK, ENCFF582WGH, ENCFF671TUD, ENCFF854IBU, ENCFF904RJF, ENCFF970VKL, DRR091690, DRR091696, DRR091698, SRR15198218, SRR6904684 chr5 33426978 33426980 - Annotated LINE|L1|X9_LINE ENSMUSG00000037373.13, Ctbp1 ENSMUST00000202820.4 ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF090USB, ENCFF192NVI, ENCFF422ATU, ENCFF486NGU, ENCFF489IGD, ENCFF812CUD, ENCFF970JWC, ENCFF067OYG, ENCFF311MZV, ENCFF377OQI, ENCFF414IHO, ENCFF522KWW, ENCFF565YJQ, ENCFF782CNW, SRR11428470, SRR5643190, SRR5643192 chr5 34173620 34173641 - Predicted LTR|ERVL|MERVL_2A-int ENSMUSG00000045102.13, Poln DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 34263128 34263163 - Annotated LTR|ERVK|RMER19B ENSMUSG00000045102.13, Poln ENSMUST00000202741.5, ENSMUST00000202076.2 ENCFF084CWD, ENCFF134HVE, ENCFF143BIC, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF236TUH, ENCFF339MSB, ENCFF364LFJ, ENCFF442FJC, ENCFF446FOZ, ENCFF467LJD, ENCFF592GVA, ENCFF608LAL, ENCFF651SDJ, ENCFF728TXU, ENCFF737OUQ, ENCFF808PVJ, ENCFF868WEJ, ENCFF943XKB, ENCFF197NCG, ENCFF199IWW, ENCFF306ADU, ENCFF342GAL, ENCFF423TSB, ENCFF454JTI, ENCFF667KKO, ENCFF715CAJ, ENCFF733LFV, ENCFF827NYZ, ENCFF906OAF chr5 34941108 34941112 + Predicted SINE|Alu|PB1D11 ENSMUSG00000029104.16, Htt SRR2089603, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 35131161 35131162 + Annotated LINE|L1|L1MB3 ENSMUSG00000029101.17, Rgs12 ENSMUST00000202915.2 chr5 35518877 35518904 + Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000106762.4, 4930478P22Rik ENSMUST00000201379.4, ENSMUST00000202026.4, ENSMUST00000201921.2, NR_046060.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 36740678 36740679 - Predicted SINE|B4|ID_B1 ENSMUSG00000029192.18, Tbc1d14 SRR13142123, SRR15198225, SRR15198226, SRR2927112 chr5 37036380 37036381 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000029120.11, Ppp2r2c SRR2089617, SRR2089638, SRR2089639 chr5 38034566 38034567 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000062329.5, ENSMUSG00000106718.2, Cytl1, Gm20052 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr5 39485090 39485091 - Predicted LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000106794.2, Gm40293 DRR091689, DRR091690, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198222, SRR15198228, SRR2927113, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 43195578 43195579 - Annotated LINE|L2|L2a ENSMUSG00000107193.2, Gm43700 ENSMUST00000200967.2 DRR091688, DRR091690, DRR091691, DRR091694, DRR091695, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr5 43195644 43195678 - Predicted LINE|L2|L2a ENSMUSG00000107193.2, Gm43700 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 43201403 43201404 - Annotated LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000106501.2, Gm42711 ENSMUST00000197060.2 chr5 43943458 43943459 - Annotated LTR|ERVK|RMER19B ENSMUSG00000106609.2, Gm43181 ENSMUST00000197001.2 ENCFF993QUE, ENCFF023MKT, ENCFF234LUQ, ENCFF345BBC, ENCFF455DHP, ENCFF970VKB, ENCFF538AIM chr5 44378461 44378462 - Predicted SINE|MIR|MIR ENSMUSG00000046985.12, Tapt1 DRR091688, DRR091690, DRR091694, DRR091696, DRR091697, DRR091698, SRR11428467, SRR2927113, SRR6338004, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178991 chr5 44798826 44798827 + Annotated LTR|ERV1|MER89 ENSMUSG00000104894.5, Gm43507 ENSMUST00000196411.5 chr5 45333021 45333035 - Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000029092.10, D5Ertd615e ENSMUST00000198493.2 DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR11428467, SRR11428468, SRR11428470, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9080666, SRR9178981, SRR9178982, SRR9178985, SRR9178989, SRR9178991 chr5 45650510 45650511 + Predicted LTR|ERV1|MER34 ENSMUSG00000039682.13, Lap3 ENCFF002EZY, ENCFF924LPZ, ENCFF499CDP, ENCFF510IAG, DRR091691, DRR091692, DRR091695, SRR10697195, SRR10697196, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR15198221, SRR15198222, SRR15198223, SRR2927111, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 4849093 4849094 - Annotated LTR|ERVK|RMER19B ENSMUSG00000105560.2, Gm42744 ENSMUST00000196517.2 chr5 48531089 48531136 + Predicted DNA|hAT-Charlie|Charlie7 ENSMUSG00000029089.9, 5730480H06Rik ENCFF027IIP, ENCFF083BIG, ENCFF102AMK, ENCFF168WHQ, ENCFF313ERY, ENCFF347UAC, ENCFF491XRO, ENCFF522VLI, ENCFF533NLR, ENCFF670YKO, ENCFF705JRV, ENCFF793CWJ, ENCFF808XFI, ENCFF881UBL, ENCFF027RRZ, ENCFF065LOT, ENCFF199IRM, ENCFF308FEA, ENCFF408NBX, ENCFF595WXV, ENCFF654AEJ, ENCFF657FNE, ENCFF721BNO, ENCFF725ATS, ENCFF775SSI, ENCFF818BAS, ENCFF831ISX, ENCFF945ICZ, ENCFF962OCF, ENCFF967NOO, ENCFF117ZMM, ENCFF131VEF, ENCFF144EDQ, ENCFF163BDT, ENCFF507VMW, ENCFF661UPO, ENCFF672WYO, ENCFF726YTS, ENCFF858OFI, ENCFF953FGT, ENCFF260KJY, ENCFF306ADU, ENCFF342GAL, ENCFF499CDP, ENCFF499GDC, ENCFF510IAG, ENCFF525QIM, ENCFF728WJB, ENCFF803OIY, SRR15198224, SRR15198228 chr5 48531422 48531423 + Predicted SINE|B4|B4A ENSMUSG00000029089.9, 5730480H06Rik ENCFF001RTJ, ENCFF002ERU, ENCFF002EZW, ENCFF002EZY, ENCFF007RPT, ENCFF059IQN, ENCFF074HTO, ENCFF094CCP, ENCFF102BWR, ENCFF115KZV, ENCFF178ZVU, ENCFF186RYS, ENCFF218HNK, ENCFF221JIC, ENCFF262URV, ENCFF297BEX, ENCFF326TQL, ENCFF330LWU, ENCFF351JWR, ENCFF352VWM, ENCFF390QUP, ENCFF392TDB, ENCFF449MIK, ENCFF450WAV, ENCFF497YRP, ENCFF552NWL, ENCFF565YHF, ENCFF581WWO, ENCFF590NVM, ENCFF625JLB, ENCFF670CXH, ENCFF761RKP, ENCFF771LLL, ENCFF784LWT, ENCFF813GGJ, ENCFF841OXD, ENCFF880FYC, ENCFF915FID, ENCFF922KQY, ENCFF931DDH, ENCFF956WVJ, ENCFF991TPB, ENCFF996STG, ENCFF013CHH, ENCFF084CWD, ENCFF134HVE, ENCFF222GPK, ENCFF270ERO, ENCFF271OHB, ENCFF296VFB, ENCFF374YTS, ENCFF465BBM, ENCFF478KOR, ENCFF487DYP, ENCFF532UKS, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF728TXU, ENCFF766LGO, ENCFF809FPA, ENCFF826RUZ, ENCFF834VIK, ENCFF868WEJ, ENCFF886BRO, ENCFF935LAF, ENCFF975NCY, ENCFF013SNI, ENCFF027GCQ, ENCFF033DWC, ENCFF037GFB, ENCFF057FFG, ENCFF065ZIE, ENCFF080REY, ENCFF087IUJ, ENCFF103SQR, ENCFF124SSE, ENCFF136DUH, ENCFF137OYQ, ENCFF158HQO, ENCFF172DMS, ENCFF187BHR, ENCFF207RVA, ENCFF267KZS, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF299ENO, ENCFF313IFI, ENCFF316EEH, ENCFF319YFJ, ENCFF350PHR, ENCFF390ZZH, ENCFF422CQE, ENCFF487OHM, ENCFF492HRC, ENCFF505PJK, ENCFF537DSI, ENCFF552KEA, ENCFF576EOD, ENCFF595NMM, ENCFF609WRW, ENCFF619SKV, ENCFF637PIP, ENCFF698WQO, ENCFF713JXV, ENCFF737VKP, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF764AQK, ENCFF834TQY, ENCFF864DTX, ENCFF877SON, ENCFF881YOK, ENCFF901KUE, ENCFF926FRX, ENCFF935ZEM, ENCFF938XTE, ENCFF939QLN, ENCFF953POL, ENCFF996AOW, ENCFF186VNL, ENCFF254YNR, ENCFF269AST, ENCFF319SDE, ENCFF344OJQ, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF494ZWE, ENCFF911OIZ, DRR091695, SRR15198219, SRR15198220, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6338004, SRR9080665, SRR9080666, SRR9178976, SRR9178987 chr5 48531490 48531534 + Predicted DNA|hAT-Charlie|Charlie7 ENSMUSG00000029089.9, 5730480H06Rik ENCFF001RTJ, ENCFF002ERU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF007RPT, ENCFF059IQN, ENCFF074HTO, ENCFF091WMS, ENCFF094CCP, ENCFF102BWR, ENCFF115KZV, ENCFF126HTW, ENCFF178ZVU, ENCFF186RYS, ENCFF189WYV, ENCFF218HNK, ENCFF221JIC, ENCFF225MMR, ENCFF262URV, ENCFF297BEX, ENCFF307VAF, ENCFF326TQL, ENCFF330LWU, ENCFF332ZPO, ENCFF351JWR, ENCFF352VWM, ENCFF390QUP, ENCFF392TDB, ENCFF449MIK, ENCFF450WAV, ENCFF497YRP, ENCFF527VIY, ENCFF552NWL, ENCFF565YHF, ENCFF581WWO, ENCFF590NVM, ENCFF625JLB, ENCFF670CXH, ENCFF743QXJ, ENCFF761RKP, ENCFF771LLL, ENCFF782JNB, ENCFF784LWT, ENCFF841OXD, ENCFF915FID, ENCFF922KQY, ENCFF931DDH, ENCFF991TPB, ENCFF996STG, ENCFF013CHH, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF148XRK, ENCFF170XMM, ENCFF222GPK, ENCFF236TUH, ENCFF270ERO, ENCFF271OHB, ENCFF296VFB, ENCFF335ZSA, ENCFF369YLA, ENCFF374YTS, ENCFF446FOZ, ENCFF465BBM, ENCFF467LJD, ENCFF487DYP, ENCFF510TTU, ENCFF532UKS, ENCFF573UIH, ENCFF581KUX, ENCFF636NES, ENCFF651SDJ, ENCFF683CWD, ENCFF694NRG, ENCFF728TXU, ENCFF766LGO, ENCFF809FPA, ENCFF826RUZ, ENCFF834VIK, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF935LAF, ENCFF952BCB, ENCFF962FIU, ENCFF975NCY, ENCFF013SNI, ENCFF027GCQ, ENCFF033DWC, ENCFF037GFB, ENCFF049SEE, ENCFF057FFG, ENCFF065ZIE, ENCFF080REY, ENCFF087IUJ, ENCFF103SQR, ENCFF116QKZ, ENCFF124SSE, ENCFF136DUH, ENCFF156ZQH, ENCFF158HQO, ENCFF172DMS, ENCFF187BHR, ENCFF189BIW, ENCFF207RVA, ENCFF267KZS, ENCFF275HRX, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF299ENO, ENCFF313IFI, ENCFF316EEH, ENCFF319YFJ, ENCFF350PHR, ENCFF390ZZH, ENCFF422CQE, ENCFF487OHM, ENCFF492HRC, ENCFF505PJK, ENCFF505WKA, ENCFF533ZIO, ENCFF537DSI, ENCFF548JDU, ENCFF552KEA, ENCFF576EOD, ENCFF595NMM, ENCFF609WRW, ENCFF614WCH, ENCFF619SKV, ENCFF637PIP, ENCFF691DJE, ENCFF696XZL, ENCFF698WQO, ENCFF713JXV, ENCFF716NXU, ENCFF737VKP, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF751QWY, ENCFF764AQK, ENCFF775OZV, ENCFF806XNV, ENCFF834TQY, ENCFF860SGX, ENCFF877SON, ENCFF881YOK, ENCFF901KUE, ENCFF926FRX, ENCFF935ZEM, ENCFF938XTE, ENCFF939QLN, ENCFF953POL, ENCFF959CWA, ENCFF996AOW, ENCFF008XVO, ENCFF062GNP, ENCFF186VNL, ENCFF254YNR, ENCFF269AST, ENCFF319SDE, ENCFF344OJQ, ENCFF366CUG, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF494ZWE, ENCFF749STK, ENCFF911OIZ, DRR091695, SRR15198219, SRR15198220, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6338004, SRR9080665, SRR9080666, SRR9178976, SRR9178987 chr5 50308659 50308676 + Annotated LTR|ERVK|RMER19B2 ENSMUSG00000104870.2, 4930448I18Rik ENSMUST00000197958.2, NR_040696.1 SRR11428468, SRR15198221, SRR15198223, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178983 chr5 50829891 50829892 + Predicted LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000105320.2, Gm43016 SRR2089610, SRR2089613, SRR2089616, SRR2089617, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr5 5470311 5470312 - Annotated LTR|ERVL-MaLR|ORR1F ENSMUSG00000028926.16, Cdk14 ENSMUST00000167567.2 chr5 58372474 58372475 - Predicted LINE|L1|Lx3B ENSMUSG00000106146.2, Gm43045 SRR13142118, SRR13142119, SRR2040601 chr5 64625400 64625401 + Annotated LTR|ERV1|MLTR14 ENSMUSG00000105251.2, 4930526M16Rik ENSMUST00000197305.2 SRR9178977, SRR9178989 chr5 64643974 64644001 + Predicted LINE|L1|L1M3 ENSMUSG00000120639.1, ENSMUSG00000120639 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9178976, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178989 chr5 65061564 65061576 - Predicted LTR|ERV1|RLTR1B-int ENSMUSG00000118495.2, Gm21011 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9178976, SRR9178977, SRR9178979, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990 chr5 65650808 65650812 + Predicted SINE|Alu|B1_Mur3 ENSMUSG00000107195.2, 4930589O11Rik ENCFF934ZAP, ENCFF017LOD, ENCFF195JLT, ENCFF222GPK, ENCFF274ESJ, ENCFF408NBX, ENCFF532UKS, ENCFF609ZVL, ENCFF670FEL, ENCFF782NPY, ENCFF860XMD, ENCFF914YDJ, ENCFF027GBM, ENCFF644GYU, ENCFF494ZWE, ENCFF555BQD, ENCFF582WGH, SRR2089615, SRR2089616, SRR2089618, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089634, SRR2089644, SRR2089646 chr5 65697674 65697702 + Predicted SINE|Alu|B1_Mur4 ENSMUSG00000029203.17, Ube2k ENCFF076CCZ, ENCFF082HKQ, ENCFF102AMK, ENCFF105KSL, ENCFF106RGV, ENCFF130KZZ, ENCFF151QHP, ENCFF251TMY, ENCFF273CJD, ENCFF279BVM, ENCFF284OMO, ENCFF289WHW, ENCFF295SYY, ENCFF313ERY, ENCFF347UAC, ENCFF352VWM, ENCFF358UFZ, ENCFF367BBB, ENCFF376MQF, ENCFF385MVU, ENCFF401HCS, ENCFF403ORF, ENCFF421ACV, ENCFF422ATU, ENCFF426QFT, ENCFF453XOG, ENCFF489VZI, ENCFF495SQR, ENCFF497YRP, ENCFF521UGJ, ENCFF524EDD, ENCFF535YBP, ENCFF544BEF, ENCFF552NWL, ENCFF554PUC, ENCFF565YHF, ENCFF585YYC, ENCFF605IFN, ENCFF622NXP, ENCFF641QXI, ENCFF643VPC, ENCFF671ERF, ENCFF686EWL, ENCFF691URX, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF723KAG, ENCFF723QIC, ENCFF764ZUI, ENCFF771LLL, ENCFF771YNG, ENCFF793CWJ, ENCFF795DLS, ENCFF823PZU, ENCFF849GVQ, ENCFF884TJE, ENCFF906FNQ, ENCFF914BRK, ENCFF931DDH, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970JWC, ENCFF972IVS, ENCFF979WZO, ENCFF985BLV, ENCFF345BBC, ENCFF359GCY, ENCFF923VUD, ENCFF933KQV, ENCFF945ICZ, ENCFF962FIU, ENCFF970VKB, ENCFF014CMK, ENCFF024CUG, ENCFF028XDY, ENCFF054EOL, ENCFF077YZF, ENCFF078CCF, ENCFF087XKQ, ENCFF088PZI, ENCFF090EUZ, ENCFF098TCZ, ENCFF107YGR, ENCFF127KHN, ENCFF134PXJ, ENCFF143RTP, ENCFF144EDQ, ENCFF149BQJ, ENCFF151XBP, ENCFF155GUC, ENCFF174EGP, ENCFF175LCC, ENCFF219PCN, ENCFF240OIM, ENCFF242MZE, ENCFF248XZC, ENCFF249LSC, ENCFF256UWN, ENCFF257EYD, ENCFF264PYB, ENCFF267VBU, ENCFF273CBP, ENCFF275TCB, ENCFF276OPJ, ENCFF292KWK, ENCFF296ITI, ENCFF305GPD, ENCFF310BWG, ENCFF310WDZ, ENCFF315HBU, ENCFF331YYO, ENCFF347EUO, ENCFF353SEU, ENCFF366CSN, ENCFF378TYU, ENCFF386CRY, ENCFF386HCR, ENCFF417INY, ENCFF421DHQ, ENCFF423GTP, ENCFF427YDU, ENCFF439HXQ, ENCFF443URE, ENCFF456GLS, ENCFF460VXC, ENCFF462HZM, ENCFF470RDW, ENCFF477MBL, ENCFF484PQK, ENCFF497KLL, ENCFF497NJW, ENCFF513BRJ, ENCFF515GXB, ENCFF522KWW, ENCFF524FJG, ENCFF529LEZ, ENCFF533ZIO, ENCFF536ZFC, ENCFF548HOL, ENCFF552LXG, ENCFF572JDP, ENCFF578MOR, ENCFF611QZE, ENCFF620FXM, ENCFF641CYW, ENCFF647RUH, ENCFF657NUT, ENCFF673SLO, ENCFF681EEO, ENCFF683WFA, ENCFF695XIY, ENCFF696XZL, ENCFF711OYQ, ENCFF712EKU, ENCFF717GIT, ENCFF726YTS, ENCFF735BVR, ENCFF746ZCS, ENCFF753HNF, ENCFF755REI, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF779MMO, ENCFF794GVC, ENCFF804EWD, ENCFF806MTS, ENCFF812LAI, ENCFF812QQI, ENCFF814TTQ, ENCFF818ZJQ, ENCFF829HAB, ENCFF840DKD, ENCFF845NUY, ENCFF883APB, ENCFF885ZAO, ENCFF899EJT, ENCFF903ULI, ENCFF906CJJ, ENCFF907KCF, ENCFF916JWW, ENCFF917KUH, ENCFF930JCE, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF936DQW, ENCFF939UBM, ENCFF948BDY, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF951PCM, ENCFF955WXI, ENCFF958FDX, ENCFF964HGL, ENCFF994JUO, ENCFF998BIQ, ENCFF248ELC, ENCFF302TQH, ENCFF477YHR, ENCFF904RJF chr5 65701025 65701026 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000029203.17, Ube2k ENCFF831ISX, ENCFF049WBL, ENCFF580KHN, ENCFF832FTK, ENCFF937KFC chr5 65941654 65941655 + Predicted DNA|hAT-Charlie|MER3 ENSMUSG00000037795.15, N4bp2 ENCFF179WPT, ENCFF437AJW, SRR9178981, SRR9178982, SRR9178991 chr5 67621240 67621264 + Annotated LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000107385.5, C330024D21Rik ENSMUST00000201973.4, ENSMUST00000202634.4, ENSMUST00000202828.2, ENSMUST00000243803.1, ENSMUST00000246255.1, NR_110363.1, NR_015582.2 ENCFF001NDA, ENCFF001NDD, ENCFF489IGD, ENCFF521IDK, ENCFF874ELO, SRR13142119, SRR15198223, SRR2040601 chr5 69369495 69369496 - Predicted LTR|ERVK|RMER20A ENSMUSG00000037653.8, Kctd8 SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089610, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 7050505 7050506 - Predicted LTR|ERVK|RLTR21 ENSMUSG00000092094.6, Zfp804b DRR091691, DRR091692, DRR091694, DRR091696, DRR091698, SRR10697198, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR9178985, SRR9178989 chr5 73314357 73314375 + Annotated LTR|ERVL-MaLR|MTE-int ENSMUSG00000086376.3, 1700071G01Rik ENSMUST00000146728.3 DRR091692, DRR091693, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198227, SRR2040601, SRR5643190, SRR6904685, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178991 chr5 73441567 73441602 + Predicted LINE|L1|Lx9 ENSMUSG00000029152.14, Ociad1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR6338004, SRR6904683, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr5 73441660 73441661 + Predicted LINE|L1|Lx9 ENSMUSG00000029152.14, Ociad1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR5643190, SRR5643192, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr5 73638552 73638553 + Predicted DNA|hAT-Tip100|MamTip2b ENSMUSG00000051674.16, Dcun1d4 ENCFF001RTN, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR6904683, SRR6904684, SRR6904685 chr5 74103711 74103726 + Annotated LTR|ERVK|RLTR17 ENSMUSG00000106968.3, C78283 ENSMUST00000245964.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, DRR091689, SRR15198218, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112 chr5 74196797 74196798 + Predicted LTR|ERVL|RMER15 ENSMUSG00000086234.4, ENSMUSG00000087250.3, Usp46os2, Usp46os1 SRR10697201, SRR10697203, SRR11428468, SRR13142119, SRR15198218, SRR15198221, SRR15198222, SRR2927113, SRR9080665, SRR9178991, SRR9178992 chr5 75171951 75171952 - Predicted LINE|CR1|L3b ENSMUSG00000029229.9, Chic2 ENCFF002FAA, ENCFF048FGD, ENCFF089WMB, ENCFF327MSM, ENCFF885AJK, ENCFF197OUM, ENCFF302KQL, ENCFF334XFS, SRR6904683 chr5 76978940 76978959 + Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000036377.20, Cracd DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697198, SRR10697199, SRR10697201, SRR11428467, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198218, SRR15198219, SRR15198226, SRR2040601, SRR2927113, SRR6338004, SRR6904685, SRR9080663, SRR9080664, SRR9080666, SRR9178981, SRR9178982, SRR9178985 chr5 77242379 77242380 + Annotated SINE|MIR|MIR3 ENSMUSG00000087541.2, Hopxos ENSMUST00000148568.2 chr5 77358752 77358753 - Predicted SINE|B4|ID_B1 ENSMUSG00000053030.12, Spink2 ENCFF001NDZ, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr5 79641106 79641130 + Predicted LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000107183.2, Gm18452 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr5 79648618 79648619 + Predicted Retroposon|L1-dep|RMER1C ENSMUSG00000107183.2, Gm18452 SRR2089604, SRR2089607, SRR2089611, SRR2089613, SRR2089638, SRR2089648 chr5 79668893 79668894 + Predicted LINE|L1|L1MdFanc_II ENSMUSG00000107183.2, Gm18452 SRR2089604, SRR2089605, SRR2089608, SRR2089609, SRR2089613, SRR2089614, SRR2089618, SRR2089623, SRR2089629, SRR2089640, SRR2089650 chr5 9049668 9049669 - Annotated LTR|ERVK|RLTR13E ENSMUSG00000084923.2, Gm15611 ENSMUST00000146928.2 ENCFF001RTN, ENCFF223BXU, ENCFF446FOZ, ENCFF737OUQ chr5 92371591 92371592 - Predicted LTR|ERVK|MLTR31FA_MM ENSMUSG00000029409.8, U90926 DRR091689, DRR091693, DRR091695, DRR091696, DRR091698, SRR10697198, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665 chr5 92719395 92719416 + Annotated LINE|L2|L2b ENSMUSG00000057068.16, Fam47e ENSMUST00000175974.2, ENSMUST00000131166.9, ENSMUST00000176448.8, ENSMUST00000082382.8, NM_001379209.1, NM_001379208.1, NM_001379206.1, NM_001379207.1, NM_001379205.1, NM_001379202.1, NM_001379203.1, NM_001170571.1, NM_001033478.2, NR_166538.1 ENCFF001RTD, ENCFF001RTN chr5 94664664 94664665 + Predicted LTR|ERV1|MMVL30-int ENSMUSG00000079424.10, ENSMUSG00000095074.6, Pramel47, Pramel42 ENCFF813GGJ, ENCFF023MKT, ENCFF143BIC, ENCFF199ZDO, ENCFF345BBC, ENCFF364LFJ, ENCFF446FOZ, ENCFF670FEL, ENCFF697AST, ENCFF804UQS, ENCFF845NXM, ENCFF912MUD, ENCFF933KQV, ENCFF933MOZ, ENCFF118YHP, ENCFF332IRR, ENCFF421DHQ, ENCFF591WVP, ENCFF751QWY, ENCFF877VSZ, ENCFF014SLC, ENCFF344OJQ, ENCFF582WGH chr5 94691563 94691564 + Predicted LTR|ERV1|RodERV21-int ENSMUSG00000095074.6, Pramel42 SRR2089620, SRR2089638, SRR2089639, SRR2089640, SRR2089649, SRR2089650, SRR2089651 chr5 99765245 99765261 + Predicted LINE|L1|HAL1 ENSMUSG00000090146.2, 4930405H06Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 100242705 100242706 - Predicted LINE|L1|L1MdA_VI ENSMUSG00000072872.4, Rybp ENCFF234LUQ, ENCFF712DGP, ENCFF970VKB, ENCFF014SLC, ENCFF062GNP, ENCFF499GDC, ENCFF582WGH, ENCFF653QJY, ENCFF904RJF chr6 101025466 101025467 + Predicted SINE|MIR|MIR3 ENSMUSG00000107427.2, Gm43948 ENCFF502ANK, ENCFF885AJK, ENCFF302KQL, ENCFF389ZWR chr6 105346928 105346929 + Predicted LINE|L1|L1MC3 ENSMUSG00002076854.1, Gm55419 DRR091689, DRR091690, DRR091697, DRR091698, SRR11428468, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178979, SRR9178983, SRR9178985 chr6 108907645 108907646 - Predicted LINE|L1|L1MdA_VI ENSMUSG00000120743.1, ENSMUSG00000120743 ENCFF261ZZF, ENCFF391UFN, ENCFF429BQZ, ENCFF519YGA, ENCFF590LNP, ENCFF596QWT, ENCFF642YTY, ENCFF643XFK, ENCFF714CKE, ENCFF721ASG, ENCFF768ZCF, ENCFF782NPY, ENCFF803VZZ, ENCFF978EQI, ENCFF254YNR, ENCFF569XGG, ENCFF592WZB, ENCFF733LFV, ENCFF782WDV, ENCFF888IIL chr6 113581200 113581201 + Predicted SINE|Alu|B1_Mur4 ENSMUSG00000033940.9, Brk1 SRR13142122, SRR9178978, SRR9178982, SRR9178988 chr6 113589405 113589406 - Annotated SINE|B4|B4A ENSMUSG00000107560.2, Gm44199 ENSMUST00000205219.2 chr6 113610104 113610125 - Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000097671.3, 1700015O11Rik ENSMUST00000180964.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR5643190, SRR5643191, SRR5643199, SRR6338004, SRR6904685, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr6 113981717 113981751 + Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000087083.3, Gm15083 ENSMUST00000138670.3, NR_167895.1 chr6 115813100 115813118 + Predicted LTR|ERVL-MaLR|ORR1A3 ENSMUSG00000107429.3, Gm44206 ENCFF048IBL, ENCFF059IQN, ENCFF116MYR, ENCFF296ASE, ENCFF297BEX, ENCFF345OIF, ENCFF470MXU, ENCFF725RXU, ENCFF933UPG, ENCFF053NFR, ENCFF073RJJ, ENCFF267KZS, ENCFF338LFG, ENCFF357QTB, ENCFF482VRF, ENCFF536ZVF, ENCFF598WAL, ENCFF609WRW, ENCFF705CES, ENCFF751QWY, ENCFF838BEV chr6 115829692 115829693 - Predicted SINE|B4|ID_B1 ENSMUSG00000030322.13, Mbd4 ENCFF002DMZ, DRR091689, DRR091693, DRR091695, DRR091697, SRR10697196, SRR10697202, SRR11428468, SRR11428469, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9178987 chr6 116050792 116050793 + Annotated SINE|B4|ID_B1 ENSMUSG00000121085.1, ENSMUSG00000121085 ENSMUST00000247091.1 ENCFF002FAA, ENCFF304DLW chr6 116227903 116228010 + Predicted LINE|L1|L1Lx_I ENSMUSG00000024104.12, Washc2 ENCFF086ZMV, ENCFF120DEX, ENCFF126RJS, ENCFF221JIC, ENCFF229AIZ, ENCFF234MZC, ENCFF273CJD, ENCFF284OMO, ENCFF289WHW, ENCFF319INV, ENCFF348VIH, ENCFF379JPQ, ENCFF385MVU, ENCFF489VZI, ENCFF524EDD, ENCFF621PKT, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF812CUD, ENCFF858CRT, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF902GVX, ENCFF910ESY, ENCFF942WIP, ENCFF960LQP, ENCFF923VUD, ENCFF014CMK, ENCFF043DTH, ENCFF080DNG, ENCFF088PZI, ENCFF136DUH, ENCFF148BPZ, ENCFF155GUC, ENCFF175LCC, ENCFF184ALY, ENCFF197JAP, ENCFF209LBA, ENCFF237JCE, ENCFF247VEN, ENCFF268YSJ, ENCFF275TCB, ENCFF285NFL, ENCFF296ITI, ENCFF303BIV, ENCFF378TYU, ENCFF386XTQ, ENCFF397ZQU, ENCFF399TOF, ENCFF466RIS, ENCFF507WIK, ENCFF512LAN, ENCFF531JWM, ENCFF537DSI, ENCFF538ZTW, ENCFF643SBQ, ENCFF663TDQ, ENCFF696XZL, ENCFF724VJN, ENCFF742DJH, ENCFF756QJD, ENCFF758JNE, ENCFF845NUY, ENCFF869MFM, ENCFF875BUD, ENCFF916BSM, ENCFF927LFD, ENCFF937KFC, ENCFF956RCJ, ENCFF985NHB, ENCFF854IBU, SRR15198219 chr6 116636561 116636562 - Predicted LINE|L2|X15_LINE ENSMUSG00000042129.9, Rassf4 ENCFF002DNB, ENCFF002EZW, ENCFF002FAE, ENCFF002FAG chr6 117536658 117536659 + Annotated LTR|ERVL|MT2A ENSMUSG00000054488.16, Gm9946 ENSMUST00000245160.1, ENSMUST00000008011.8, ENSMUST00000162741.8, NR_168036.1 chr6 117693303 117693304 + Annotated LTR|ERVK|RLTR45-int ENSMUSG00000104222.2, Gm7292 ENSMUST00000194706.2 chr6 117838985 117838986 + Annotated SINE|B4|RSINE1 NM_008616.3, NM_001360938.1 ENCFF001NDZ, SRR2927111 chr6 117839061 117839062 + Annotated SINE|B4|RSINE1 ENSMUSG00000042097.18, Zfp239 ENSMUST00000136316.2 ENCFF001NDZ, ENCFF001NEC, ENCFF489IGD, ENCFF874ELO, SRR15198224, SRR15198228, SRR2927111 chr6 117877285 117877302 + Annotated SINE|Alu|PB1 ENSMUSG00000042079.14, Hnrnpf ENSMUST00000177743.8, ENSMUST00000167182.8, NM_001166432.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF001RTJ, ENCFF002DMZ, ENCFF002ERU, ENCFF002ERW, ENCFF051JGE, ENCFF221JNS, ENCFF347HAB, ENCFF589REP, ENCFF793IYH, ENCFF989HJD, ENCFF993QUE, ENCFF013HYW, ENCFF195JLT, ENCFF234LUQ, ENCFF274ESJ, ENCFF345BBC, ENCFF455DHP, ENCFF532UKS, ENCFF609ZVL, ENCFF712DGP, ENCFF933KQV, ENCFF935LAF, ENCFF945ICZ, ENCFF970VKB, ENCFF157IFW, ENCFF014SLC, ENCFF062GNP, ENCFF186VNL, ENCFF260KJY, ENCFF302TQH, ENCFF349AIG, ENCFF442OKF, ENCFF477YHR, ENCFF494ZWE, ENCFF574YMK, ENCFF582WGH, ENCFF653QJY, ENCFF671TUD, ENCFF720MPJ, ENCFF904RJF chr6 118285673 118285688 - Annotated LTR|ERVL-MaLR|ORR1F NR_110507.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR15198217, SRR15198221, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178989 chr6 121114397 121114448 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000119973.1, ENSMUSG00000119973 ENSMUST00000240888.1, ENSMUST00000245211.1, ENSMUST00000246231.1, ENSMUST00000241366.1, ENSMUST00000244553.1, NR_167972.1, NR_167973.1 ENCFF001RTD, ENCFF001RTN chr6 122577316 122577317 - Annotated LTR|ERVK|MRLTR33 ENSMUSG00000040613.15, Apobec1 ENSMUST00000203204.3 ENCFF242SVY chr6 122579287 122579501 - Annotated LTR|ERVK|RLTR19-int ENSMUSG00000040613.15, Apobec1 ENSMUST00000112586.8, ENSMUST00000112585.8, ENSMUST00000203309.3, ENSMUST00000203197.3, ENSMUST00000147760.8, ENSMUST00000143356.2, NM_031159.3, NM_001134391.1 ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DMZ, ENCFF002DND, ENCFF002ERU, ENCFF002EZW, ENCFF002FAA, ENCFF002FAC, ENCFF022FSI, ENCFF023RRS, ENCFF027IIP, ENCFF051JGE, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF075MGH, ENCFF083CUR, ENCFF091WMS, ENCFF102BWR, ENCFF117BGT, ENCFF120DEX, ENCFF121BYS, ENCFF126HTW, ENCFF126RJS, ENCFF136POG, ENCFF138QRF, ENCFF143PHU, ENCFF151QHP, ENCFF160HKC, ENCFF163LPQ, ENCFF168WHQ, ENCFF178ZVU, ENCFF186RYS, ENCFF189WYV, ENCFF192NVI, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207DLW, ENCFF207OVG, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF234MZC, ENCFF262URV, ENCFF262WAE, ENCFF264RIV, ENCFF265LKR, ENCFF269UZL, ENCFF273CJD, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF283XKV, ENCFF287KDR, ENCFF291LRG, ENCFF295SYY, ENCFF297CWJ, ENCFF308LTO, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF326TQL, ENCFF330IYN, ENCFF330LWU, ENCFF332ZPO, ENCFF347HAB, ENCFF349LIW, ENCFF351JWR, ENCFF363CYZ, ENCFF363XWU, ENCFF371VGE, ENCFF372GOY, ENCFF376MQF, ENCFF381JXP, ENCFF385GUJ, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF400XLQ, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF415KCJ, ENCFF421ACV, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF449MIK, ENCFF450WAV, ENCFF460NGS, ENCFF472YPG, ENCFF478FDA, ENCFF482MUH, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF504ULZ, ENCFF519IZA, ENCFF521IDK, ENCFF521UGJ, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533NLR, ENCFF534DID, ENCFF535YBP, ENCFF544BEF, ENCFF552DRF, ENCFF552NWL, ENCFF564OKH, ENCFF564YPB, ENCFF565YHF, ENCFF570KYE, ENCFF575RUC, ENCFF585YYC, ENCFF589MBR, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF606EDP, ENCFF608NVM, ENCFF622NXP, ENCFF639RWJ, ENCFF645QUX, ENCFF670CXH, ENCFF670YKO, ENCFF672HUA, ENCFF691URX, ENCFF705JRV, ENCFF707QJV, ENCFF723KAG, ENCFF723QIC, ENCFF743RQJ, ENCFF755FCM, ENCFF761RKP, ENCFF764ZUI, ENCFF775BPV, ENCFF780TUN, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793STU, ENCFF795DLS, ENCFF796NHQ, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF868XLZ, ENCFF878SQO, ENCFF884DLS, ENCFF884TJE, ENCFF886XAI, ENCFF888HEF, ENCFF896IIZ, ENCFF910ESY, ENCFF915FID, ENCFF917RNE, ENCFF925ONP, ENCFF934ULS, ENCFF934ZAP, ENCFF937GBW, ENCFF941QCZ, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF970XZM, ENCFF972IVS, ENCFF979WZO, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF994BOT, ENCFF023MKT, ENCFF195JLT, ENCFF234LUQ, ENCFF274ESJ, ENCFF345BBC, ENCFF359GCY, ENCFF455DHP, ENCFF510LAE, ENCFF609ZVL, ENCFF657UWH, ENCFF712DGP, ENCFF775SSI, ENCFF838YLT, ENCFF923VUD, ENCFF935LAF, ENCFF945ICZ, ENCFF970VKB, ENCFF002SZY, ENCFF002ZAX, ENCFF006JHA, ENCFF008YSM, ENCFF012HVN, ENCFF014CMK, ENCFF016CHX, ENCFF019PWU, ENCFF023TPS, ENCFF024CUG, ENCFF027GCQ, ENCFF027QGO, ENCFF039PJR, ENCFF041PJP, ENCFF043DTH, ENCFF045YRV, ENCFF046HWP, ENCFF049SEE, ENCFF049WBL, ENCFF055PZZ, ENCFF057MDU, ENCFF060FGD, ENCFF064VAD, ENCFF065ZIE, ENCFF066UDR, ENCFF067OYG, ENCFF068KDU, ENCFF077CYB, ENCFF077YZF, ENCFF080BTV, ENCFF080DNG, ENCFF082BJV, ENCFF082OML, ENCFF085RPW, ENCFF088PZI, ENCFF098AYQ, ENCFF098TCZ, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF108JLQ, ENCFF116QKZ, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF127DCC, ENCFF128CYW, ENCFF131VEF, ENCFF133PKQ, ENCFF134VWD, ENCFF141YUD, ENCFF142PTA, ENCFF156XMZ, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF167GWU, ENCFF169JOQ, ENCFF174EGP, ENCFF175LCC, ENCFF177LXI, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF186NDY, ENCFF187BHR, ENCFF189JVE, ENCFF197JAP, ENCFF197TJB, ENCFF198XFF, ENCFF203EWG, ENCFF205CDI, ENCFF207HZS, ENCFF209LBA, ENCFF209RRO, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF223SMG, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF243LBQ, ENCFF248XZC, ENCFF254VIN, ENCFF255XDN, ENCFF256UWN, ENCFF258WLS, ENCFF260BJB, ENCFF264PYB, ENCFF267VBU, ENCFF268YSJ, ENCFF272VMY, ENCFF272WGJ, ENCFF273CBP, ENCFF275HRX, ENCFF275TCB, ENCFF277JGD, ENCFF278JAU, ENCFF279EVY, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF292KWK, ENCFF296UDD, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF306OWL, ENCFF310HAL, ENCFF315OFF, ENCFF319YFJ, ENCFF321NRW, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332IRR, ENCFF335UNU, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346NGU, ENCFF346UBA, ENCFF348RRM, ENCFF350KYC, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF366CSN, ENCFF366IEQ, ENCFF371ZDG, ENCFF374VAZ, ENCFF386XTQ, ENCFF387BVS, ENCFF397MUI, ENCFF399TOF, ENCFF403CRC, ENCFF403RPK, ENCFF406LFV, ENCFF411YXB, ENCFF414IHO, ENCFF421DHQ, ENCFF422CQE, ENCFF423GTP, ENCFF424GQM, ENCFF426ZCK, ENCFF427YDU, ENCFF438ROC, ENCFF439BEV, ENCFF440IAL, ENCFF450CUC, ENCFF453MPR, ENCFF456GLS, ENCFF458EUS, ENCFF460FON, ENCFF462HZM, ENCFF464KYQ, ENCFF468RDR, ENCFF469JWF, ENCFF478MHH, ENCFF478YRJ, ENCFF479WHZ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF486GBM, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF504PGI, ENCFF505WKA, ENCFF507WIK, ENCFF512LAN, ENCFF515GXB, ENCFF516QKR, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF529LEZ, ENCFF531JWM, ENCFF536ZFC, ENCFF536ZVF, ENCFF538TFM, ENCFF543GNI, ENCFF543PXT, ENCFF548JDU, ENCFF549IDH, ENCFF549KAB, ENCFF552KEA, ENCFF558UDY, ENCFF565DII, ENCFF565FFU, ENCFF566HCI, ENCFF572JDP, ENCFF573WSG, ENCFF578MOR, ENCFF580KHN, ENCFF581ZWM, ENCFF585CYT, ENCFF587HBC, ENCFF588JAU, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596PMK, ENCFF597BNT, ENCFF598LJF, ENCFF598WAL, ENCFF603QSQ, ENCFF611OFH, ENCFF611QZE, ENCFF612KDP, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF627XGF, ENCFF635XED, ENCFF636SOT, ENCFF637CVI, ENCFF637GVH, ENCFF641CYW, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647KBV, ENCFF655CUI, ENCFF655KBW, ENCFF657NUT, ENCFF658NHH, ENCFF661TOM, ENCFF661UPO, ENCFF667RGF, ENCFF668SQN, ENCFF672WYO, ENCFF673ZDG, ENCFF683WFA, ENCFF685FUZ, ENCFF687STH, ENCFF694EPZ, ENCFF696QTS, ENCFF696TTO, ENCFF696XZL, ENCFF698XCB, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711XWR, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF717GIT, ENCFF726YTS, ENCFF727JTZ, ENCFF737VKP, ENCFF740TFX, ENCFF740WXS, ENCFF742DJH, ENCFF753HNF, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF759WDO, ENCFF770WIT, ENCFF775OZV, ENCFF779MMO, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF794GVC, ENCFF796TQV, ENCFF798TFC, ENCFF801SNQ, ENCFF803ZUN, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF812LAI, ENCFF820JMO, ENCFF829WND, ENCFF834TET, ENCFF838BEV, ENCFF845NUY, ENCFF847HFJ, ENCFF848LWJ, ENCFF848UMJ, ENCFF849PKR, ENCFF853PNO, ENCFF856UMI, ENCFF859MTL, ENCFF861RRQ, ENCFF863ENS, ENCFF864DTX, ENCFF866IHG, ENCFF867FTP, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF886UAF, ENCFF894COY, ENCFF901KUE, ENCFF903ULI, ENCFF904KCQ, ENCFF906CJJ, ENCFF907KCF, ENCFF908MGO, ENCFF916BSM, ENCFF916JWW, ENCFF921PGH, ENCFF926FRX, ENCFF927LFD, ENCFF930JCE, ENCFF931NMQ, ENCFF934QGX, ENCFF934VFW, ENCFF935ZEM, ENCFF936DQW, ENCFF937KFC, ENCFF944RHJ, ENCFF946LMX, ENCFF948YKH, ENCFF949QCF, ENCFF952FJN, ENCFF955WXI, ENCFF956ZKG, ENCFF958BIE, ENCFF958FDX, ENCFF962ZCT, ENCFF966VVA, ENCFF970PLY, ENCFF976SMI, ENCFF984QED, ENCFF985NHB, ENCFF997QQG, ENCFF998BIQ, ENCFF062GNP, ENCFF160TQC, ENCFF186VNL, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF349AIG, ENCFF442OKF, ENCFF446LMP, ENCFF477YHR, ENCFF481CFU, ENCFF499GDC, ENCFF574YMK, ENCFF653QJY, ENCFF671TUD, ENCFF720MPJ, ENCFF854IBU, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927113 chr6 122586973 122587167 - Annotated LINE|L2|L2a ENSMUSG00000030117.6, Gdf3 ENSMUST00000032211.5, NM_008108.5 ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF002ERW, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF104LLO, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF308LTO, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347HAB, ENCFF351JWR, ENCFF363CYZ, ENCFF371VGE, ENCFF375EMG, ENCFF381JXP, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF437AJW, ENCFF439OFV, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF470MXU, ENCFF478FDA, ENCFF482MUH, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521IDK, ENCFF527VIY, ENCFF528CBF, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF552NWL, ENCFF564OKH, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF696TCH, ENCFF711WAC, ENCFF725RXU, ENCFF734FHF, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793CWJ, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF865WQE, ENCFF878SQO, ENCFF880FYC, ENCFF888HEF, ENCFF896IIZ, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF951MOU, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF055PZZ, ENCFF056UGH, ENCFF057FFG, ENCFF065ZIE, ENCFF066MTU, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF103SQR, ENCFF116QKZ, ENCFF120SMK, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF149BQJ, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF235HER, ENCFF243LBQ, ENCFF243TPB, ENCFF255ESE, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF275TCB, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF306OWL, ENCFF313IFI, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF380BYT, ENCFF380LXU, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399YLV, ENCFF406LFV, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF430ERW, ENCFF454DOT, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF552KEA, ENCFF563FUC, ENCFF569ELL, ENCFF576EOD, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF643SBQ, ENCFF644GYU, ENCFF655CUI, ENCFF656DRS, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF698WQO, ENCFF707HQI, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF780UQU, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF819JGD, ENCFF821HAZ, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF855UFX, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF926FRX, ENCFF934VFW, ENCFF938XTE, ENCFF949QCF, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF994PPZ, ENCFF998BIQ, ENCFF999ZYF chr6 124298552 124298675 - Annotated LTR|ERVK|RLTR19-int ENSMUSG00000121011.1, ENSMUSG00000121011 ENSMUST00000246850.1, NR_168032.1 ENCFF001NDZ, ENCFF001NEC, ENCFF002DMZ, ENCFF002DNB, ENCFF002ERW, ENCFF002FAG, ENCFF007RPT, ENCFF027IIP, ENCFF048IBL, ENCFF051JSS, ENCFF059IQN, ENCFF074HTO, ENCFF090USB, ENCFF094CCP, ENCFF102BWR, ENCFF104LLO, ENCFF106GQS, ENCFF114PSQ, ENCFF116MYR, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF261OTH, ENCFF274WSX, ENCFF296ASE, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF344ILW, ENCFF345OIF, ENCFF351JWR, ENCFF375EMG, ENCFF426QFT, ENCFF437AJW, ENCFF445BBH, ENCFF470MXU, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF548SLN, ENCFF564OKH, ENCFF595GFM, ENCFF623BKO, ENCFF683RFI, ENCFF707QJV, ENCFF725RXU, ENCFF796NHQ, ENCFF813GGJ, ENCFF841OXD, ENCFF878SQO, ENCFF933UPG, ENCFF934ZAP, ENCFF993QUE, ENCFF996STG, ENCFF013HYW, ENCFF274ESJ, ENCFF296VFB, ENCFF377UGQ, ENCFF379TZT, ENCFF595WXV, ENCFF642YTY, ENCFF782NPY, ENCFF933KQV, ENCFF004AEL, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF027GCQ, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF070YMI, ENCFF073RJJ, ENCFF082BJV, ENCFF088SVK, ENCFF094RHV, ENCFF103SQR, ENCFF126WDH, ENCFF150HVU, ENCFF163DKN, ENCFF172DMS, ENCFF177SGB, ENCFF197TJB, ENCFF205CDI, ENCFF243LBQ, ENCFF243TPB, ENCFF267KZS, ENCFF278JAU, ENCFF285NFL, ENCFF296UDD, ENCFF302MXO, ENCFF315OFF, ENCFF320CXH, ENCFF321NRW, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF348RRM, ENCFF357QTB, ENCFF369VAI, ENCFF380BYT, ENCFF380LXU, ENCFF390ZZH, ENCFF397MUI, ENCFF408FFP, ENCFF409ABB, ENCFF411KCB, ENCFF426ETE, ENCFF429ZEH, ENCFF430ERW, ENCFF458EUS, ENCFF476JSK, ENCFF482VRF, ENCFF512XKX, ENCFF517EJZ, ENCFF536ZVF, ENCFF538TFM, ENCFF566HCI, ENCFF569ELL, ENCFF584OOK, ENCFF591WVP, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF637CVI, ENCFF637PIP, ENCFF643SBQ, ENCFF656DRS, ENCFF673GRZ, ENCFF689RQK, ENCFF689UNV, ENCFF705CES, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF743NNG, ENCFF749XRU, ENCFF751QWY, ENCFF766UJI, ENCFF769FVU, ENCFF806XNV, ENCFF819JGD, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF863LMG, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF952EQQ, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF959CWA, ENCFF960QTC, ENCFF966VVA, ENCFF970WCD, ENCFF983GRF, ENCFF994PPZ, ENCFF014SLC, ENCFF888IIL, ENCFF904RJF, SRR15198220, SRR15198221, SRR15198223, SRR15198226, SRR15198228 chr6 124298746 124298747 - Predicted LTR|ERVK|RLTR19-int ENSMUSG00000121011.1, ENSMUSG00000121011 ENCFF001NDZ, ENCFF142CUS, ENCFF163LPQ, ENCFF274WSX, ENCFF310HPH, ENCFF345OIF, ENCFF470MXU, ENCFF495YGN, ENCFF707QJV, ENCFF725RXU, ENCFF813GGJ, ENCFF851ESH, ENCFF878SQO, ENCFF027GBM, ENCFF037IZV, ENCFF053NFR, ENCFF088SVK, ENCFF150HVU, ENCFF163DKN, ENCFF172DMS, ENCFF315OFF, ENCFF430ERW, ENCFF458EUS, ENCFF476JSK, ENCFF482VRF, ENCFF538TFM, ENCFF566HCI, ENCFF591WVP, ENCFF637PIP, ENCFF689RQK, ENCFF727EPG, ENCFF834TQY, ENCFF863LMG, ENCFF886UAF, ENCFF900AIQ, ENCFF921PGH, ENCFF953POL, ENCFF953WBM, ENCFF959CWA, ENCFF970LRH, ENCFF983GRF, ENCFF904RJF, SRR15198226 chr6 124451819 124451820 + Annotated LTR|ERVK|RLTR16C_MM ENSMUSG00000121078.1, ENSMUSG00000121078 ENSMUST00000247081.1 chr6 124559340 124559361 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000038521.18, C1s1 ENCFF101BDM, ENCFF143BIC, ENCFF251WZA, ENCFF269WEZ, ENCFF315OOH, ENCFF364LFJ, ENCFF442FJC, ENCFF510LAE, ENCFF521NCL, ENCFF657OJR, ENCFF670FEL, ENCFF694NRG, ENCFF697AST, ENCFF728TXU, ENCFF754TOT, ENCFF775SSI, ENCFF826RUZ, ENCFF838YLT, ENCFF845NXM, ENCFF923VUD, ENCFF952BCB, ENCFF242SVY, ENCFF366CUG, ENCFF481CFU, ENCFF555BQD chr6 124985482 124985487 + Predicted SINE|Alu|B1_Mm ENSMUSG00000038346.19, Zfp384 ENCFF002FAG, ENCFF092YWY, ENCFF133PEB, ENCFF160HKC, ENCFF287KDR, ENCFF312CZB, ENCFF330LWU, ENCFF426QFT, ENCFF643VPC, ENCFF896MQK, ENCFF922KQY, ENCFF985BLV, ENCFF394BDJ, ENCFF595WXV, ENCFF609ZVL, ENCFF912MUD, ENCFF047LTH, ENCFF094RHV, ENCFF187BHR, ENCFF306FQJ, ENCFF338LFG, ENCFF397ZQU, ENCFF421DHQ, ENCFF505YPK, ENCFF524FJG, ENCFF927LFD, ENCFF949QCF, ENCFF997QQG, ENCFF499GDC, ENCFF671TUD, ENCFF904RJF, DRR091690, SRR10697196, SRR11428468, SRR15198222, SRR2927112, SRR2927113 chr6 124985604 124985757 + Predicted SINE|B2|B3 ENSMUSG00000038346.19, Zfp384 ENCFF002ERU, ENCFF002FAG, ENCFF040EEJ, ENCFF091WMS, ENCFF106RGV, ENCFF116MYR, ENCFF120DEX, ENCFF139MHN, ENCFF186RYS, ENCFF189WYV, ENCFF212ZXS, ENCFF287KDR, ENCFF310HPH, ENCFF326TQL, ENCFF334RGJ, ENCFF345OIF, ENCFF390QUP, ENCFF521IDK, ENCFF528CBF, ENCFF589REP, ENCFF590NVM, ENCFF623BKO, ENCFF711WAC, ENCFF734FHF, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF793STU, ENCFF896IIZ, ENCFF912RLS, ENCFF935XRF, ENCFF937GBW, ENCFF989HJD, ENCFF394BDJ, ENCFF455DHP, ENCFF056UGH, ENCFF065UBR, ENCFF080BTV, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF118YHP, ENCFF120SMK, ENCFF156ZQH, ENCFF157IFW, ENCFF163BDT, ENCFF163DKN, ENCFF163GEC, ENCFF187BHR, ENCFF278JAU, ENCFF279EVY, ENCFF286RSE, ENCFF306FQJ, ENCFF331YYO, ENCFF344VGL, ENCFF387BVS, ENCFF390AUP, ENCFF399YLV, ENCFF429TQT, ENCFF430ERW, ENCFF464KYQ, ENCFF470RDW, ENCFF478BEL, ENCFF482VRF, ENCFF492HRC, ENCFF505YPK, ENCFF507VMW, ENCFF524FJG, ENCFF541HSQ, ENCFF548HOL, ENCFF561CZI, ENCFF598WAL, ENCFF613SEJ, ENCFF615ULR, ENCFF651HEM, ENCFF689UNV, ENCFF716NXU, ENCFF724VJN, ENCFF727JTZ, ENCFF781XUM, ENCFF900AIQ, ENCFF927LFD, ENCFF955YCX, ENCFF959CWA, ENCFF996AOW, ENCFF494ZWE, ENCFF499GDC, ENCFF671TUD, ENCFF904RJF, DRR091688, DRR091690, SRR10697199, SRR10697203, SRR2927113, SRR9178983 chr6 125209136 125209137 - Predicted SINE|B4|B4A ENSMUSG00000038213.8, Tapbpl ENCFF001RTJ, ENCFF074HTO, ENCFF102AMK, ENCFF206EGD, ENCFF289WHW, ENCFF585YYC, ENCFF595GFM, ENCFF223BXU, ENCFF335ZSA, ENCFF572TOH, ENCFF590LNP, ENCFF667SYQ, ENCFF754TOT, ENCFF766LGO, ENCFF834VIK, ENCFF140WZW, ENCFF142PTA, ENCFF149BQJ, ENCFF155GUC, ENCFF203EWG, ENCFF296UDD, ENCFF302MXO, ENCFF377OQI, ENCFF524PAV, ENCFF538TFM, ENCFF606XHA, ENCFF637PIP, ENCFF751QWY, ENCFF830CBI, ENCFF843WRN, ENCFF917KUH, ENCFF926IDV, ENCFF952LUC, ENCFF302TQH, ENCFF446LMP, ENCFF827NYZ, ENCFF906OAF, SRR10697195, SRR10697203, SRR13142118, SRR13142120, SRR13142121, SRR2040601, SRR2927113, SRR9178977, SRR9178978, SRR9178983, SRR9178987, SRR9178992 chr6 125455264 125455265 - Annotated SINE|Alu|PB1D10 ENSMUSG00000030342.9, Cd9 ENSMUST00000130132.2 chr6 125509496 125509581 + Predicted LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000001930.18, Vwf ENCFF005NBP, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF048IBL, ENCFF051JSS, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF074HUJ, ENCFF075MGH, ENCFF076CCZ, ENCFF082HKQ, ENCFF083CUR, ENCFF084PUC, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF104LLO, ENCFF105KSL, ENCFF106RGV, ENCFF108UNS, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF120DEX, ENCFF121OLG, ENCFF125HRQ, ENCFF133PEB, ENCFF138QRF, ENCFF139MHN, ENCFF142CUS, ENCFF151QHP, ENCFF159OVE, ENCFF162UVS, ENCFF163LPQ, ENCFF168WHQ, ENCFF178PMH, ENCFF179WPT, ENCFF186RYS, ENCFF189WYV, ENCFF196PBF, ENCFF207DLW, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF269UZL, ENCFF273CJD, ENCFF273TLO, ENCFF274WSX, ENCFF277XPM, ENCFF279BVM, ENCFF289WHW, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF304MIZ, ENCFF305IXM, ENCFF307VAF, ENCFF310HPH, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF326TQL, ENCFF330IYN, ENCFF330LWU, ENCFF331WKS, ENCFF334RGJ, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF347UAC, ENCFF348VIH, ENCFF351JWR, ENCFF358UFZ, ENCFF366BBB, ENCFF367BBB, ENCFF371VGE, ENCFF375EMG, ENCFF379JPQ, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF400XLQ, ENCFF403ORF, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF432ZLQ, ENCFF439OFV, ENCFF445BBH, ENCFF462ABU, ENCFF470MXU, ENCFF472YPG, ENCFF482MUH, ENCFF486NGU, ENCFF489VZI, ENCFF491XRO, ENCFF495SQR, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521UGJ, ENCFF522VLI, ENCFF527VIY, ENCFF528CBF, ENCFF533CLY, ENCFF533JUU, ENCFF533NLR, ENCFF535YBP, ENCFF544BEF, ENCFF548SLN, ENCFF552DRF, ENCFF552NWL, ENCFF554PUC, ENCFF564OKH, ENCFF565YHF, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF606EDP, ENCFF608NVM, ENCFF621PKT, ENCFF622NXP, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF647ICR, ENCFF654BXL, ENCFF670CXH, ENCFF670YKO, ENCFF671ERF, ENCFF683RFI, ENCFF686EWL, ENCFF705JRV, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723QIC, ENCFF725RXU, ENCFF743RQJ, ENCFF745HSV, ENCFF755FCM, ENCFF764EJV, ENCFF764TGO, ENCFF764ZUI, ENCFF771LLL, ENCFF773VFS, ENCFF775BPV, ENCFF780TUN, ENCFF782JNB, ENCFF783MLO, ENCFF784LWT, ENCFF787LWL, ENCFF789LUC, ENCFF792XYG, ENCFF793CWJ, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF812CUD, ENCFF813GGJ, ENCFF841OXD, ENCFF844KCR, ENCFF849GVQ, ENCFF851ESH, ENCFF858CRT, ENCFF858CTQ, ENCFF863RVB, ENCFF876MJS, ENCFF878SQO, ENCFF880FYC, ENCFF881TID, ENCFF883UYA, ENCFF884DLS, ENCFF884TJE, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF906FNQ, ENCFF907HVO, ENCFF912RLS, ENCFF913CFN, ENCFF917RNE, ENCFF922KQY, ENCFF924VRI, ENCFF931DDH, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF937GBW, ENCFF942WIP, ENCFF946AGD, ENCFF951MOU, ENCFF951UXE, ENCFF956WVJ, ENCFF960LQP, ENCFF970JWC, ENCFF970XZM, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF994BOT, ENCFF002SZY, ENCFF002ZAX, ENCFF004AEL, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF014CMK, ENCFF015JJB, ENCFF016CHX, ENCFF019PVP, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF027GCQ, ENCFF033DWC, ENCFF034WGV, ENCFF037GFB, ENCFF037IZV, ENCFF037LEJ, ENCFF041PJP, ENCFF046HWP, ENCFF047LTH, ENCFF049WBL, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF065UBR, ENCFF067OYG, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077YZF, ENCFF080BTV, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF087OKI, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF094RHV, ENCFF098AYQ, ENCFF103SQR, ENCFF106GHS, ENCFF108JLQ, ENCFF111MWQ, ENCFF116QKZ, ENCFF117ZMM, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF126WDH, ENCFF127KHN, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF134VWD, ENCFF136DUH, ENCFF136TYP, ENCFF137OYQ, ENCFF140WZW, ENCFF141YUD, ENCFF142PTA, ENCFF148BPZ, ENCFF149DFF, ENCFF150HVU, ENCFF156ZQH, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF167GWU, ENCFF169JOQ, ENCFF172DMS, ENCFF177LXI, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF185TRT, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF207HZS, ENCFF207RVA, ENCFF208BJY, ENCFF209LBA, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF228CMT, ENCFF229CPV, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF240OIM, ENCFF243TPB, ENCFF249LSC, ENCFF254TFB, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF258WLS, ENCFF260BJB, ENCFF264PYB, ENCFF267KZS, ENCFF268YSJ, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF273CBP, ENCFF275TCB, ENCFF276OPJ, ENCFF278JAU, ENCFF279EVY, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF305GPD, ENCFF306FQJ, ENCFF306OWL, ENCFF310HAL, ENCFF310WDZ, ENCFF311MZV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF332IRR, ENCFF332RWQ, ENCFF338DAA, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF346HDC, ENCFF346UBA, ENCFF347EUO, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF363PDR, ENCFF366CSN, ENCFF366IEQ, ENCFF369VAI, ENCFF371ZDG, ENCFF374VAZ, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF386HCR, ENCFF390ZZH, ENCFF397MUI, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406NLL, ENCFF408FFP, ENCFF411KCB, ENCFF414IHO, ENCFF421DHQ, ENCFF423GTP, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF429ZEH, ENCFF430ERW, ENCFF437QAE, ENCFF437ZSM, ENCFF439BEV, ENCFF439HXQ, ENCFF443URE, ENCFF450CUC, ENCFF456GLS, ENCFF458EUS, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF487OHM, ENCFF490ULA, ENCFF497GLK, ENCFF497KLL, ENCFF504PGI, ENCFF505WKA, ENCFF505YPK, ENCFF507VMW, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF517EJZ, ENCFF518TUP, ENCFF519AKK, ENCFF522KWW, ENCFF529LEZ, ENCFF533ZIO, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF549IDH, ENCFF549KAB, ENCFF552KEA, ENCFF559QXN, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF572JDP, ENCFF572SQL, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF581RIR, ENCFF584OOK, ENCFF584ZUK, ENCFF585CYT, ENCFF588JAU, ENCFF591WVP, ENCFF596INO, ENCFF596PMK, ENCFF597BNT, ENCFF598BFX, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF619SKV, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF641CYW, ENCFF643SBQ, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647KBV, ENCFF647RUH, ENCFF655CUI, ENCFF655KBW, ENCFF656DRS, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF668SQN, ENCFF673GRZ, ENCFF673SLO, ENCFF681EEO, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF694EPZ, ENCFF695XIY, ENCFF696TTO, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF698XCB, ENCFF705CES, ENCFF707HQI, ENCFF712BKP, ENCFF712EKU, ENCFF716NXU, ENCFF723QWN, ENCFF724VJN, ENCFF727EPG, ENCFF741PLM, ENCFF742DJH, ENCFF743NNG, ENCFF746ZCS, ENCFF749XRU, ENCFF751QWY, ENCFF754VQW, ENCFF755REI, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF758JNE, ENCFF764AQK, ENCFF765AQX, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF775OZV, ENCFF781MKK, ENCFF781XUM, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF804EWD, ENCFF806MTS, ENCFF806XNV, ENCFF809QBQ, ENCFF814PHK, ENCFF816CPX, ENCFF817HZQ, ENCFF818ZJQ, ENCFF819JGD, ENCFF821HAZ, ENCFF825JNK, ENCFF829WND, ENCFF830CBI, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF845NUY, ENCFF853PNO, ENCFF855UFX, ENCFF856UMI, ENCFF858OFI, ENCFF863LMG, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF886UAF, ENCFF894COY, ENCFF898CAY, ENCFF900AIQ, ENCFF904KCQ, ENCFF906CJJ, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF921PGH, ENCFF927LFD, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF934VFW, ENCFF938CNS, ENCFF948YKH, ENCFF949QCF, ENCFF952EQQ, ENCFF952FJN, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF958BIE, ENCFF958LRX, ENCFF959CWA, ENCFF960QTC, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974KKD, ENCFF976SMI, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF994JUO, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF997QQG, ENCFF998BIQ, ENCFF999ZYF chr6 128564987 128564988 - Annotated LTR|ERVL|MLT2B1 ENSMUSG00000107503.2, Gm44009 ENSMUST00000203539.2 SRR15198221, SRR2040601 chr6 128863208 128863209 + Predicted LINE|L1|Lx2B ENSMUSG00000000248.17, ENSMUSG00000030365.12, Clec2g, Clec2i ENCFF359GCY, ENCFF455DHP, ENCFF186VNL, ENCFF574YMK, ENCFF854IBU chr6 129319654 129319655 + Annotated LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000053063.12, Clec12a ENSMUST00000151671.8 ENCFF426QFT, ENCFF334XFS, ENCFF689ZLL chr6 129599645 129599647 - Annotated SINE|Alu|PB1D9 ENSMUSG00000030149.16, Klrk1 ENSMUST00000137660.2, NM_033078.4 ENCFF102BWR, ENCFF570KYE, ENCFF274ESJ chr6 130439724 130439725 - Predicted LTR|ERVK|RLTR10B2 ENSMUSG00000107492.2, Gm6590 DRR091688, DRR091693, DRR091694, DRR091697, DRR091699, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227 chr6 130442471 130442484 - Predicted LTR|ERVK|RLTR10B2 ENSMUSG00000107492.2, Gm6590 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091695, DRR091696, DRR091697, DRR091699, SRR11428469, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113 chr6 134373263 134373309 + Annotated DNA|TcMar-Tigger|Tigger16b ENSMUSG00000030200.14, Bcl2l14 ENSMUST00000032321.11, ENSMUST00000139183.2, NM_025778.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR6904684, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 134380010 134380011 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000107666.2, 4933406J09Rik SRR15198218, SRR15198224, SRR15198225, SRR15198226 chr6 134584643 134584644 - Annotated SINE|B2|B3 ENSMUSG00000107728.2, Gm38910 ENSMUST00000204630.2 chr6 135165478 135165479 + Annotated SINE|Alu|PB1D11 ENSMUSG00000108239.2, Gm19434 ENSMUST00000204330.2, NR_040296.1 chr6 136392561 136392567 - Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000045291.9, E330021D16Rik ENSMUST00000204830.2, ENSMUST00000203392.2, NM_001201390.1 chr6 136440673 136440674 + Annotated SINE|B4|ID_B1 NR_168025.1 chr6 13657276 13657277 - Predicted LINE|L1|L1MdF_IV ENSMUSG00000042742.8, Bmt2 SRR2089603, SRR2089605, SRR2089606, SRR2089608, SRR2089609, SRR2089616, SRR2089617, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089635, SRR2089636, SRR2089651 chr6 137117060 137117061 - Annotated LTR|ERVL-MaLR|MLT1F2 ENSMUSG00000030222.14, Rerg ENSMUST00000203003.2 chr6 137142449 137142469 - Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000030222.14, Rerg DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091698, SRR10697203, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198224, SRR15198225, SRR15198227, SRR9080662, SRR9178977, SRR9178978, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178991, SRR9178992 chr6 137496757 137496758 - Annotated SINE|B4|B4A ENSMUSG00000015766.15, Eps8 ENSMUST00000127179.2 chr6 137496892 137496893 - Annotated SINE|B4|B4A NM_001271589.1 chr6 139299573 139299574 - Annotated LTR|ERVK|RLTR31B2 ENSMUSG00000108128.2, 4922502N22Rik ENSMUST00000204038.2, NR_045149.1 chr6 139534600 139534609 - Annotated LTR|ERVL|RMER15 ENSMUSG00000107679.2, 4930404I20Rik ENSMUST00000203246.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR2927113, SRR3178203, SRR9080665, SRR9178977, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178989, SRR9178992 chr6 139787229 139787230 + Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000030228.20, Pik3c2g ENSMUST00000187223.7 ENCFF084CWD, ENCFF269WEZ, ENCFF284AEN, ENCFF442FJC, ENCFF521NCL, ENCFF567AFB, ENCFF651SDJ, ENCFF694NRG, ENCFF826RUZ, ENCFF834VIK, ENCFF845NXM, ENCFF854KNE, ENCFF862FYE, ENCFF912MUD, ENCFF933MOZ, ENCFF943XKB, ENCFF969WLB, ENCFF975NCY chr6 139787307 139787308 + Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000030228.20, Pik3c2g ENSMUST00000187448.2 ENCFF084CWD, ENCFF269WEZ, ENCFF284AEN, ENCFF442FJC, ENCFF521NCL, ENCFF567AFB, ENCFF651SDJ, ENCFF694NRG, ENCFF826RUZ, ENCFF834VIK, ENCFF845NXM, ENCFF854KNE, ENCFF912MUD, ENCFF933MOZ, ENCFF943XKB, ENCFF969WLB, ENCFF975NCY chr6 141892535 141892542 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000041698.12, Slco1a1 ENSMUST00000168119.8, ENSMUST00000171651.2 ENCFF001RTD, ENCFF001RTN, ENCFF683CWD, ENCFF838YLT chr6 141892687 141892688 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000041698.12, Slco1a1 ENSMUST00000042119.6, NM_013797.5 chr6 142935326 142935332 + Predicted LTR|ERVL-MaLR|MLT1L ENSMUSG00000107839.2, 4930434O05Rik DRR091688, DRR091689, DRR091692, DRR091693, DRR091696, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR11428469, SRR11428470, SRR13142118, SRR13142121, SRR15198220, SRR15198222, SRR15198223, SRR15198227, SRR15198228, SRR2927113, SRR9178979, SRR9178980, SRR9178981, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178991 chr6 143597013 143597014 - Annotated LINE|L1|Lx8 ENSMUSG00000086887.2, 1700060C16Rik ENSMUST00000150559.2, NR_045732.1 SRR11428467, SRR11428470, SRR13142118, SRR15198221, SRR2040601, SRR9178976, SRR9178979 chr6 144618587 144618614 + Annotated SINE|B4|B4 ENSMUSG00000085785.8, Sox5os3 ENSMUST00000139351.8, NR_040519.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR6338004, SRR6904683, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 145061362 145061380 + Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000030263.14, Irag2 ENSMUST00000135984.8, NM_001281980.1, NM_001281981.1 ENCFF001RTF, ENCFF002FAA, ENCFF326TQL, ENCFF023MKT chr6 145559998 145560045 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000054966.14, Lmntd1 ENSMUST00000148739.8, ENSMUST00000144829.2 chr6 146992734 146992735 + Predicted SINE|B2|B3A ENSMUSG00000040102.11, Klhl42 ENCFF002FAE, ENCFF017LOD, ENCFF065TCZ, ENCFF148XRK, ENCFF199IRM, ENCFF269SRJ, ENCFF348FTH, ENCFF374YTS, ENCFF379TZT, ENCFF465BBM, ENCFF532UKS, ENCFF533DWD, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF647TTU, ENCFF721BNO, ENCFF744OEI, ENCFF756QCA, ENCFF818BAS, ENCFF886BRO, ENCFF014SLC, ENCFF075EMK, ENCFF494ZWE, ENCFF499GDC, ENCFF847LGC chr6 147145298 147145341 - Annotated LINE|L1|Lx8 ENSMUSG00000086021.3, Gm15767 ENSMUST00000153521.3, NR_157236.1, NR_157237.1 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTJ, ENCFF101BDM, ENCFF251WZA, ENCFF510LAE, ENCFF657OJR, ENCFF775SSI, ENCFF912MUD, ENCFF242SVY, ENCFF366CUG, ENCFF481CFU, ENCFF555BQD, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178978, SRR9178979, SRR9178981, SRR9178983, SRR9178984, SRR9178987, SRR9178990, SRR9178991 chr6 14781007 14781008 - Predicted LINE|L1|Lx8b ENSMUSG00000042717.6, Ppp1r3a DRR091689, DRR091692, DRR091693, DRR091698, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR11428467, SRR11428468, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198225, SRR15198227, SRR15198228, SRR2927113 chr6 148831226 148831227 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000085355.3, 3010003L21Rik ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr6 149198553 149198554 + Predicted LTR|ERVK|RLTR31_Mm ENSMUSG00000032712.17, Resf1 ENCFF269UZL, ENCFF432ZLQ, ENCFF533CLY, ENCFF931DDH, ENCFF047LTH, ENCFF429ZEH, ENCFF454DOT, ENCFF483KXD, ENCFF531JWM, ENCFF578MOR, ENCFF584ZUK, ENCFF791ZDR, ENCFF910CTW, ENCFF949QCF, ENCFF962ZCT, SRR13142118, SRR13142119, SRR15198223, SRR2927112, SRR2927113 chr6 149206454 149206456 + Predicted SINE|Alu|B1_Mm ENSMUSG00000032712.17, Resf1 ENCFF086ZMV, ENCFF198NQV, ENCFF205GJI, ENCFF287KDR, ENCFF332ZPO, ENCFF334RGJ, ENCFF540XSD, ENCFF589MBR, ENCFF910ESY, ENCFF107YGR, ENCFF136TYP, ENCFF518TUP, ENCFF611QZE, ENCFF658NHH, ENCFF759WDO, ENCFF816CPX, ENCFF994JUO chr6 149209859 149209860 + Predicted LTR|ERV1|RLTR48B ENSMUSG00000032712.17, Resf1 ENCFF051PTY, ENCFF229AIZ, ENCFF330IYN, ENCFF519IZA, ENCFF711WAC, ENCFF796NHQ, ENCFF906FNQ, ENCFF960LQP, ENCFF019PWU, ENCFF023TPS, ENCFF106GHS, ENCFF240OIM, ENCFF286GUQ, ENCFF346UBA, ENCFF409ABB, ENCFF423GTP, ENCFF426FAF, ENCFF562MVN, ENCFF700IPC, ENCFF717GIT, ENCFF724VJN, ENCFF758JNE, ENCFF781MKK, ENCFF877VSZ, ENCFF916BSM, ENCFF964DLW, ENCFF971DTR, ENCFF974XWJ, ENCFF302TQH chr6 149209937 149209938 + Predicted LTR|ERV1|RLTR48B ENSMUSG00000032712.17, Resf1 ENCFF043JGD, ENCFF051PTY, ENCFF229AIZ, ENCFF330IYN, ENCFF595GFM, ENCFF711WAC, ENCFF796NHQ, ENCFF906FNQ, ENCFF016CHX, ENCFF106GHS, ENCFF409ABB, ENCFF423GTP, ENCFF562MVN, ENCFF565DII, ENCFF700IPC, ENCFF717GIT, ENCFF724VJN, ENCFF758JNE, ENCFF864DTX, ENCFF877VSZ, ENCFF958BIE, ENCFF964DLW, ENCFF971DTR, ENCFF302TQH chr6 149210608 149210618 + Predicted LTR|ERV1|RLTR48B ENSMUSG00000032712.17, Resf1 ENCFF001RTN, ENCFF091WMS, ENCFF159OVE, ENCFF163LPQ, ENCFF212JFB, ENCFF261OTH, ENCFF296ASE, ENCFF351JWR, ENCFF392TDB, ENCFF393YET, ENCFF478FDA, ENCFF590NVM, ENCFF743RQJ, ENCFF775RSS, ENCFF841OXD, ENCFF934ZAP, ENCFF970XZM, ENCFF991TPB, ENCFF065TCZ, ENCFF845NXM, ENCFF027GBM, ENCFF037IZV, ENCFF046HWP, ENCFF056UGH, ENCFF128CYW, ENCFF156ZQH, ENCFF178ZXW, ENCFF189JVE, ENCFF205CDI, ENCFF229CPV, ENCFF272VMY, ENCFF279EVY, ENCFF357QTB, ENCFF406LFV, ENCFF414IHO, ENCFF430ERW, ENCFF460FON, ENCFF478BEL, ENCFF541HSQ, ENCFF578PSU, ENCFF585CYT, ENCFF588JAU, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF646GBS, ENCFF716NXU, ENCFF749XRU, ENCFF756QJD, ENCFF766UJI, ENCFF791AUB, ENCFF798TFC, ENCFF810SCH, ENCFF818ZJQ, ENCFF861RRQ, ENCFF901KUE, ENCFF903ULI, ENCFF952LUC, ENCFF494ZWE, ENCFF626KIV, ENCFF749STK, SRR15198217, SRR15198226 chr6 149210670 149210719 + Predicted LTR|ERV1|RLTR48B ENSMUSG00000032712.17, Resf1 ENCFF001RTD, ENCFF001RTN, ENCFF074HTO, ENCFF090USB, ENCFF091WMS, ENCFF119KNP, ENCFF125HRQ, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF212JFB, ENCFF261OTH, ENCFF273CJD, ENCFF296ASE, ENCFF310HPH, ENCFF344ILW, ENCFF347HAB, ENCFF349LIW, ENCFF351JWR, ENCFF392TDB, ENCFF393YET, ENCFF470MXU, ENCFF478FDA, ENCFF491XRO, ENCFF495YGN, ENCFF525POD, ENCFF548SLN, ENCFF552DRF, ENCFF564OKH, ENCFF589REP, ENCFF590NVM, ENCFF743RQJ, ENCFF764TGO, ENCFF775BPV, ENCFF775RSS, ENCFF793STU, ENCFF808XFI, ENCFF841OXD, ENCFF863RVB, ENCFF878SQO, ENCFF886XAI, ENCFF902GVX, ENCFF934ZAP, ENCFF942WIP, ENCFF951UXE, ENCFF970JWC, ENCFF970XZM, ENCFF991TPB, ENCFF052WUB, ENCFF065TCZ, ENCFF304DLW, ENCFF364LFJ, ENCFF651SDJ, ENCFF683CWD, ENCFF694NRG, ENCFF845NXM, ENCFF002SZY, ENCFF027GBM, ENCFF027GCQ, ENCFF037IZV, ENCFF043DTH, ENCFF046HWP, ENCFF056UGH, ENCFF087OKI, ENCFF128CYW, ENCFF156ZQH, ENCFF157IFW, ENCFF178ZXW, ENCFF185TRT, ENCFF189JVE, ENCFF205CDI, ENCFF207RVA, ENCFF229CPV, ENCFF248XZC, ENCFF260BJB, ENCFF268ZHE, ENCFF273CBP, ENCFF279EVY, ENCFF299ENO, ENCFF305GPD, ENCFF311MZV, ENCFF357QTB, ENCFF382VCK, ENCFF414IHO, ENCFF426ETE, ENCFF427YDU, ENCFF430ERW, ENCFF450CUC, ENCFF460FON, ENCFF478BEL, ENCFF504PGI, ENCFF505WKA, ENCFF512XKX, ENCFF515GXB, ENCFF565FFU, ENCFF578PSU, ENCFF581RIR, ENCFF585CYT, ENCFF588JAU, ENCFF594GIP, ENCFF596PMK, ENCFF598BFX, ENCFF598LJF, ENCFF615ULR, ENCFF627XGF, ENCFF632HDE, ENCFF640RWH, ENCFF644GYU, ENCFF646GBS, ENCFF673GRZ, ENCFF673SLO, ENCFF689RQK, ENCFF694EPZ, ENCFF699SBZ, ENCFF716NXU, ENCFF723QWN, ENCFF740TFX, ENCFF749XRU, ENCFF756QJD, ENCFF757JMT, ENCFF766UJI, ENCFF780UQU, ENCFF791AUB, ENCFF798TFC, ENCFF801SNQ, ENCFF809QBQ, ENCFF810SCH, ENCFF818ZJQ, ENCFF829WND, ENCFF834TET, ENCFF861RRQ, ENCFF863LMG, ENCFF866IHG, ENCFF901KUE, ENCFF903ULI, ENCFF952LUC, ENCFF970LRH, ENCFF997QQG, ENCFF008XVO, ENCFF494ZWE, ENCFF510AYI, ENCFF626KIV, ENCFF749STK, SRR15198217, SRR15198219, SRR15198224, SRR15198226, SRR9080665 chr6 15722727 15722748 + Predicted SINE|Alu|B1_Mm ENSMUSG00000041390.19, Mdfic ENCFF206EGD, ENCFF367BBB, ENCFF881TID, ENCFF009AVK, ENCFF022ACG, ENCFF106RLX, ENCFF142PTA, ENCFF148BPZ, ENCFF184ALY, ENCFF185TRT, ENCFF248XZC, ENCFF271RFU, ENCFF332RWQ, ENCFF371ZDG, ENCFF427YDU, ENCFF453MPR, ENCFF497NJW, ENCFF522KWW, ENCFF562MVN, ENCFF597BNT, ENCFF603QSQ, ENCFF658NHH, ENCFF696TTO, ENCFF817NCH, ENCFF939UBM, ENCFF948YKH, ENCFF950FFF, ENCFF970PLY chr6 17487797 17487798 + Predicted SINE|MIR|MIRb ENSMUSG00000009376.16, Met ENCFF002FAA, ENCFF002FAG, SRR15198223 chr6 19278791 19278816 - Predicted LTR|ERVL-MaLR|MTE2a ENSMUSG00000107217.2, 4930524B17Rik DRR091691, DRR091692, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697198, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178982 chr6 21852165 21852270 - Annotated LTR|LTR|LTR90A ENSMUSG00000029669.15, Tspan12 ENSMUST00000143531.2, NM_001363814.1 ENCFF001NDA, ENCFF001NDD, ENCFF002EZU, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005GQR, ENCFF013CHH, ENCFF033ZUH, ENCFF052WUB, ENCFF065LOT, ENCFF065TCZ, ENCFF134HVE, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF199IRM, ENCFF222GPK, ENCFF233IFH, ENCFF236TUH, ENCFF247QZW, ENCFF261ZZF, ENCFF271OHB, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377UGQ, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF444YCN, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF510TTU, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF608LAL, ENCFF609KQB, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF654AEJ, ENCFF657FNE, ENCFF657UWH, ENCFF694NRG, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF756QCA, ENCFF768ZCF, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF818BAS, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF845NXM, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF886BRO, ENCFF914YDJ, ENCFF920FVY, ENCFF924LPZ, ENCFF939IUH, ENCFF943XKB, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF978EQI, ENCFF008XVO, ENCFF075EMK, ENCFF269AST, ENCFF277QHC, ENCFF319SDE, ENCFF366CUG, ENCFF399XUL, ENCFF446LMP, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF525QIM, ENCFF555BQD, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF670VVN, ENCFF715CAJ, ENCFF723MAR, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, SRR13142119, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112 chr6 25931425 25931426 + Annotated LTR|ERVK|RLTR44B ENSMUSG00000106799.2, Gm20756 ENSMUST00000201324.2, NR_040771.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF001RTJ chr6 29279592 29279593 + Annotated SINE|B4|B4 ENSMUSG00000079652.9, Garin1a ENSMUST00000167131.8 SRR5643190, SRR9178983 chr6 31095831 31095841 - Predicted SINE|B4|B4A ENSMUSG00000044471.14, Lncpint ENCFF040EEJ, ENCFF107XGE, ENCFF126RJS, ENCFF130KZZ, ENCFF192NVI, ENCFF212ZXS, ENCFF284OMO, ENCFF376MQF, ENCFF400XLQ, ENCFF533NLR, ENCFF540XSD, ENCFF704GEB, ENCFF784LWT, ENCFF789LUC, ENCFF914BRK, ENCFF391UFN, ENCFF054EOL, ENCFF082OML, ENCFF095NMU, ENCFF116DGU, ENCFF117ZMM, ENCFF149DFF, ENCFF155GUC, ENCFF174EGP, ENCFF208BJY, ENCFF267VBU, ENCFF273CBP, ENCFF328TJH, ENCFF440IAL, ENCFF531JWM, ENCFF549IDH, ENCFF558UDY, ENCFF596PMK, ENCFF637GVH, ENCFF641CYW, ENCFF661TOM, ENCFF742DJH, ENCFF753HNF, ENCFF764AQK, ENCFF782CNW, ENCFF790WIY, ENCFF812LAI, ENCFF834TET, ENCFF840EFC, ENCFF499GDC, ENCFF653QJY chr6 31196070 31196071 - Predicted DNA|Kolobok|UCON29 ENSMUSG00000044471.14, Lncpint ENCFF001RTD, ENCFF027IIP, ENCFF064PBF, ENCFF117BGT, ENCFF262WAE, ENCFF319INV, ENCFF347UAC, ENCFF379JPQ, ENCFF489VZI, ENCFF491XRO, ENCFF522VLI, ENCFF535YBP, ENCFF565YHF, ENCFF710DAI, ENCFF823PZU, ENCFF828WIK, ENCFF884DLS, ENCFF942WIP, ENCFF946AGD, ENCFF956WVJ, ENCFF960LQP, ENCFF970XZM, ENCFF994BOT, ENCFF067UCQ, ENCFF251WZA, ENCFF296VFB, ENCFF500QZK, ENCFF533DWD, ENCFF912MUD, ENCFF923VUD, ENCFF016CHX, ENCFF037LEJ, ENCFF080BTV, ENCFF087OKI, ENCFF089SWU, ENCFF108JLQ, ENCFF111MWQ, ENCFF127KHN, ENCFF148BPZ, ENCFF237JCE, ENCFF255XDN, ENCFF256UWN, ENCFF303BIV, ENCFF310HAL, ENCFF324ITL, ENCFF346UBA, ENCFF374VAZ, ENCFF376PQU, ENCFF386HCR, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF423GTP, ENCFF484PQK, ENCFF507VMW, ENCFF533ZIO, ENCFF565FFU, ENCFF581ZWM, ENCFF585CYT, ENCFF632HDE, ENCFF643SBQ, ENCFF696XZL, ENCFF758BKM, ENCFF758JNE, ENCFF772QLP, ENCFF781MKK, ENCFF786BUI, ENCFF818ZJQ, ENCFF821HAZ, ENCFF858OFI, ENCFF916BSM, ENCFF916JWW, ENCFF931NMQ, ENCFF997QQG, ENCFF119IHT chr6 31536685 31536686 - Predicted SINE|Alu|PB1D9 ENSMUSG00000025608.10, Podxl SRR2089605, SRR2089612, SRR2089620, SRR2089622, SRR2089623, SRR2089629 chr6 33412249 33412250 + Predicted LINE|L1|L1MdA_IV ENSMUSG00000029763.18, Exoc4 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr6 33412696 33412697 + Predicted LINE|L1|L1MdA_IV ENSMUSG00000029763.18, Exoc4 SRR2089606, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650 chr6 3415855 3415856 - Predicted LINE|L1|L1Lx_IV ENSMUSG00000047735.15, Samd9l SRR2089622, SRR2089635, SRR2089636, SRR2089637, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650 chr6 34422364 34422399 - Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000084965.2, Gm13857 ENSMUST00000150561.2, ENSMUST00000141091.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 34880376 34880377 - Predicted LTR|ERVK|RLTR34B_MM ENSMUSG00000058486.12, Wdr91 SRR2089605, SRR2089606, SRR2089608, SRR2089609, SRR2089613, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089640, SRR2089642 chr6 35500076 35500077 - Predicted LINE|L2|L2b ENSMUSG00000029840.9, Mtpn SRR2089608, SRR2089609, SRR2089610, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089631, SRR2089633 chr6 3570657 3570702 + Annotated LINE|L1|L1_Rod ENSMUSG00000001376.18, Vps50 ENSMUST00000183532.8 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178206, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 37506960 37506961 + Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000038641.13, Akr1d1 ENCFF442FJC, ENCFF754TOT, ENCFF766LGO, ENCFF862FYE chr6 38192597 38192598 - Predicted LINE|L1|L1MC5a ENSMUSG00000063455.17, D630045J12Rik SRR2089605, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089642, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr6 38542591 38542592 + Predicted DNA|hAT-Tip100|hAT-N1_Mam ENSMUSG00000029823.17, Luc7l2 ENCFF002ERW, ENCFF106GQS, ENCFF178PMH, ENCFF450WAV, ENCFF725RXU, ENCFF056UGH, SRR9178981 chr6 38960244 38960245 + Annotated LINE|CR1|L3 ENSMUSG00000029925.14, Tbxas1 ENSMUST00000161360.2 ENCFF724VJN chr6 39069365 39069453 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000038507.7, Parp12 ENCFF393UZV, ENCFF002ZAX, ENCFF024CUG, ENCFF030IFE, ENCFF035BBA, ENCFF077CYB, ENCFF080DNG, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF127DCC, ENCFF127KHN, ENCFF134PXJ, ENCFF136DUH, ENCFF151XBP, ENCFF166UTY, ENCFF189JVE, ENCFF197JAP, ENCFF220GKL, ENCFF221ZQB, ENCFF228CMT, ENCFF237HDL, ENCFF239RQP, ENCFF240OIM, ENCFF254TFB, ENCFF276OPJ, ENCFF286GUQ, ENCFF296ITI, ENCFF310WDZ, ENCFF319YFJ, ENCFF403CRC, ENCFF404HLB, ENCFF411YXB, ENCFF417INY, ENCFF422CQE, ENCFF433QNW, ENCFF437ZSM, ENCFF462HZM, ENCFF470RDW, ENCFF477MBL, ENCFF484PQK, ENCFF505YPK, ENCFF527XBQ, ENCFF538ZTW, ENCFF565FFU, ENCFF581ZWM, ENCFF601JTS, ENCFF612KDP, ENCFF620FXM, ENCFF635XED, ENCFF636SOT, ENCFF651HEM, ENCFF667RGF, ENCFF678CRA, ENCFF680OWA, ENCFF685FUZ, ENCFF687STH, ENCFF696VQM, ENCFF699SBZ, ENCFF711XWR, ENCFF750IZJ, ENCFF755REI, ENCFF765AQX, ENCFF791AUB, ENCFF812QQI, ENCFF820JMO, ENCFF840DKD, ENCFF845NUY, ENCFF847IGW, ENCFF858OFI, ENCFF863ENS, ENCFF875BUD, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF894COY, ENCFF896XAZ, ENCFF900LFN, ENCFF904KCQ, ENCFF916BSM, ENCFF938CNS, ENCFF950FFF, ENCFF953FGT, ENCFF958LRX, ENCFF970PLY, ENCFF976SMI, ENCFF986DZE, ENCFF996AOW, SRR9178992 chr6 3988857 3988858 - Annotated LTR|ERV1|RMER5 ENSMUSG00000029664.11, Tfpi2 ENSMUST00000203257.2, NR_138566.1 chr6 3988918 3988936 - Annotated LTR|ERV1|RMER5 ENSMUSG00000029664.11, Tfpi2 ENSMUST00000183682.3, NM_001381908.1, NM_001381907.1 ENCFF001RTD, ENCFF001RTN chr6 4047495 4047496 - Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000107681.2, 4930528H21Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6904685, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 4047553 4047588 - Annotated LTR|ERVL-MaLR|MTE2b ENSMUSG00000107681.2, 4930528H21Rik ENSMUST00000204264.2, NR_131108.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6904685, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 40867803 40867804 - Annotated LTR|ERVK|RLTR31C_MM ENSMUSG00000104084.2, Gm38276 ENSMUST00000192446.2 chr6 43359415 43359425 + Annotated LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000120319.1, ENSMUSG00000120319 ENSMUST00000242519.1, ENSMUST00000247481.1 ENCFF002FAA, ENCFF270ERO, ENCFF939IUH, ENCFF361MLD, ENCFF446LMP chr6 43419363 43419364 + Annotated LTR|ERVK|RLTR16C_MM NR_045988.1 SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198226, SRR15198227, SRR15198228 chr6 43512560 43512565 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000029735.18, Tpk1 SRR2089604, SRR2089623, SRR2089632, SRR2089634, SRR2089641, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr6 43513200 43513201 - Predicted LINE|L1|Lx2B2 ENSMUSG00000029735.18, Tpk1 SRR2089617, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089639, SRR2089641, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr6 43515701 43515706 - Predicted LINE|L1|L1_Rod ENSMUSG00000029735.18, Tpk1 SRR2089605, SRR2089617, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089636, SRR2089639, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr6 47854191 47854192 + Predicted LINE|L2|L2b ENSMUSG00000025821.10, Zfp282 ENCFF002EZU, ENCFF727WWV, ENCFF013CHH, ENCFF033ZUH, ENCFF239RQP, ENCFF442OKF, ENCFF494ZWE, ENCFF499GDC, SRR10697195, SRR10697199, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113 chr6 49241167 49241192 - Predicted SINE|Alu|PB1D9 ENSMUSG00000029817.12, Tra2a ENCFF575RUC, ENCFF068CQU, ENCFF409ABB, ENCFF584OOK, DRR091688, DRR091691, DRR091692, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904684, SRR6904685, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 49540117 49540123 - Predicted LTR|ERVL-MaLR|MTE-int ENSMUSG00000108266.2, Gm5305 DRR091688, DRR091689, DRR091690, DRR091693, DRR091694, DRR091695, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 50361442 50361554 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000029822.16, Osbpl3 ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF040EEJ, ENCFF043JGD, ENCFF051PTY, ENCFF056GXQ, ENCFF064PBF, ENCFF074HTO, ENCFF084PUC, ENCFF086ZMV, ENCFF091WMS, ENCFF092YWY, ENCFF094CCP, ENCFF106RGV, ENCFF115KZV, ENCFF117BGT, ENCFF119KNP, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF138TOM, ENCFF139MHN, ENCFF140VGY, ENCFF147GLI, ENCFF151QHP, ENCFF162UVS, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF196PBF, ENCFF205GJI, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF225MMR, ENCFF229AIZ, ENCFF234MZC, ENCFF251TMY, ENCFF262URV, ENCFF264DCN, ENCFF277XPM, ENCFF279BVM, ENCFF287KDR, ENCFF291LRG, ENCFF296ASE, ENCFF297CWJ, ENCFF308LTO, ENCFF312CZB, ENCFF326TQL, ENCFF331WKS, ENCFF332ZPO, ENCFF344LNZ, ENCFF345OIF, ENCFF349LIW, ENCFF352VWM, ENCFF363CYZ, ENCFF371VGE, ENCFF379JPQ, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF393YET, ENCFF400XLQ, ENCFF401HCS, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF432ZLQ, ENCFF439OFV, ENCFF449MIK, ENCFF460NGS, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF527VIY, ENCFF533JUU, ENCFF534DID, ENCFF540XSD, ENCFF552DRF, ENCFF552NWL, ENCFF564YPB, ENCFF581WWO, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF606EDP, ENCFF622NXP, ENCFF625JLB, ENCFF639RWJ, ENCFF641QXI, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF698LQF, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF727WWV, ENCFF734FHF, ENCFF743QXJ, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF771LLL, ENCFF773VFS, ENCFF775RSS, ENCFF782JNB, ENCFF784LWT, ENCFF789LUC, ENCFF793CWJ, ENCFF793STU, ENCFF802GAN, ENCFF808XFI, ENCFF813ZJI, ENCFF828WIK, ENCFF844QDN, ENCFF849GVQ, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF868XLZ, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF896IIZ, ENCFF896MQK, ENCFF912RLS, ENCFF913CFN, ENCFF915FID, ENCFF922KQY, ENCFF924VRI, ENCFF931DDH, ENCFF931PFF, ENCFF933UPG, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF951MOU, ENCFF951UXE, ENCFF970JWC, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF006JHA, ENCFF009AVK, ENCFF013SNI, ENCFF014CMK, ENCFF019PWU, ENCFF022ACG, ENCFF024CUG, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF045YRV, ENCFF046HWP, ENCFF047LTH, ENCFF049SEE, ENCFF049WBL, ENCFF054EOL, ENCFF055PZZ, ENCFF057MDU, ENCFF061WTN, ENCFF064VAD, ENCFF065UBR, ENCFF065ZIE, ENCFF067OYG, ENCFF068CQU, ENCFF077CYB, ENCFF080BTV, ENCFF080DNG, ENCFF082OML, ENCFF085RPW, ENCFF087IUJ, ENCFF087XKQ, ENCFF090EUZ, ENCFF095NMU, ENCFF098AYQ, ENCFF098TCZ, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF118PQI, ENCFF118YHP, ENCFF121IDD, ENCFF124SSE, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134PXJ, ENCFF136TYP, ENCFF137OYQ, ENCFF139JTM, ENCFF141YUD, ENCFF142PTA, ENCFF149BQJ, ENCFF149DFF, ENCFF151XBP, ENCFF156XMZ, ENCFF156ZQH, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163GEC, ENCFF166UTY, ENCFF167GWU, ENCFF169JOQ, ENCFF170KWW, ENCFF175LCC, ENCFF177LXI, ENCFF178ZXW, ENCFF184ALY, ENCFF186NDY, ENCFF189BIW, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF198XFF, ENCFF199AAD, ENCFF203EWG, ENCFF208BJY, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF228CMT, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237JCE, ENCFF239RQP, ENCFF242MZE, ENCFF247VEN, ENCFF248XZC, ENCFF249LSC, ENCFF254TFB, ENCFF258WLS, ENCFF260BJB, ENCFF260UQJ, ENCFF264PYB, ENCFF267VBU, ENCFF268ZHE, ENCFF271RFU, ENCFF272VMY, ENCFF272WGJ, ENCFF275HRX, ENCFF277JGD, ENCFF279EVY, ENCFF280LCC, ENCFF286RSE, ENCFF291SCS, ENCFF296ITI, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF303BIV, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF310WDZ, ENCFF313IFI, ENCFF315HBU, ENCFF316EEH, ENCFF319YFJ, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332IRR, ENCFF335UNU, ENCFF343MZH, ENCFF344VGL, ENCFF346HDC, ENCFF346UBA, ENCFF352KGC, ENCFF359DNK, ENCFF363PDR, ENCFF366CSN, ENCFF369VAI, ENCFF370VOV, ENCFF377OQI, ENCFF378TYU, ENCFF382VCK, ENCFF386CRY, ENCFF386XTQ, ENCFF390AUP, ENCFF394AUR, ENCFF397ZQU, ENCFF403CRC, ENCFF403RPK, ENCFF404HLB, ENCFF406LFV, ENCFF411YXB, ENCFF414IHO, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF424GQM, ENCFF426ZCK, ENCFF429TQT, ENCFF433QNW, ENCFF437QAE, ENCFF437ZSM, ENCFF439BEV, ENCFF439HXQ, ENCFF450CUC, ENCFF453MPR, ENCFF454DOT, ENCFF456GLS, ENCFF459TYQ, ENCFF460VXC, ENCFF462HZM, ENCFF464KYQ, ENCFF468RDR, ENCFF470RDW, ENCFF478BEL, ENCFF478MHH, ENCFF478YRJ, ENCFF479WHZ, ENCFF483KXD, ENCFF483SQS, ENCFF486BJT, ENCFF490ULA, ENCFF492HRC, ENCFF497KLL, ENCFF498OHV, ENCFF505PJK, ENCFF505WKA, ENCFF512LAN, ENCFF513BRJ, ENCFF517BAY, ENCFF518TUP, ENCFF522KWW, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF529YFS, ENCFF531JWM, ENCFF536ZFC, ENCFF537DSI, ENCFF538ZTW, ENCFF543GNI, ENCFF548JDU, ENCFF549IDH, ENCFF549KAB, ENCFF552KEA, ENCFF561CZI, ENCFF562MVN, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF572JDP, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578YPJ, ENCFF584ZUK, ENCFF585CYT, ENCFF588JAU, ENCFF591WVP, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596INO, ENCFF601JTS, ENCFF603QSQ, ENCFF611OFH, ENCFF611QZE, ENCFF613SEJ, ENCFF614WCH, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637GVH, ENCFF640RWH, ENCFF644GYU, ENCFF647KBV, ENCFF647RUH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF657NUT, ENCFF658NHH, ENCFF672WYO, ENCFF673BPE, ENCFF673ZDG, ENCFF678CRA, ENCFF680OWA, ENCFF680WIN, ENCFF683WFA, ENCFF685FUZ, ENCFF685GDB, ENCFF687GPO, ENCFF693POR, ENCFF694EPZ, ENCFF696QTS, ENCFF696TTO, ENCFF696VQM, ENCFF698WQO, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF713JXV, ENCFF724VJN, ENCFF727JTZ, ENCFF735BVR, ENCFF737VKP, ENCFF740TFX, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF747VYT, ENCFF750IZJ, ENCFF751QWY, ENCFF755REI, ENCFF757JMT, ENCFF758IOS, ENCFF759HJA, ENCFF759WDO, ENCFF765AQX, ENCFF765UBL, ENCFF780UQU, ENCFF781XUM, ENCFF782CNW, ENCFF789AOM, ENCFF790WIY, ENCFF791AUB, ENCFF791ZDR, ENCFF794MMU, ENCFF801SNQ, ENCFF803ZUN, ENCFF806MTS, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF814PHK, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF818ZJQ, ENCFF820JMO, ENCFF821HAZ, ENCFF825JNK, ENCFF829HAB, ENCFF832FTK, ENCFF834TQY, ENCFF840DKD, ENCFF840EFC, ENCFF847HFJ, ENCFF848LWJ, ENCFF849PKR, ENCFF851JLX, ENCFF853PNO, ENCFF854LJN, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF863ENS, ENCFF864DTX, ENCFF869DVY, ENCFF875BUD, ENCFF877SON, ENCFF877VSZ, ENCFF881YOK, ENCFF885ZAO, ENCFF894COY, ENCFF896XAZ, ENCFF899EJT, ENCFF901KUE, ENCFF903KDM, ENCFF904KCQ, ENCFF908MGO, ENCFF910CTW, ENCFF917KUH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF928YDQ, ENCFF932XKS, ENCFF935ZEM, ENCFF936DQW, ENCFF936LNA, ENCFF938CNS, ENCFF938XTE, ENCFF939QLN, ENCFF939UBM, ENCFF944RHJ, ENCFF948YKH, ENCFF949QCF, ENCFF951PCM, ENCFF956ZKG, ENCFF964HGL, ENCFF970PLY, ENCFF974XWJ, ENCFF976SMI, ENCFF986DZE, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF998BIQ, ENCFF999ZYF chr6 50482709 50482710 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000121037.1, ENSMUSG00000121037 ENSMUST00000246954.1, ENSMUST00000247433.1 ENCFF002ERU, ENCFF002ERW, ENCFF426QFT, ENCFF450WAV, ENCFF874ELO chr6 51285736 51285757 - Predicted SINE|B2|B3A ENSMUSG00000107619.2, Gm32479 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 51441139 51441140 - Annotated LTR|ERVK|RLTR19-int ENSMUSG00000004980.17, Hnrnpa2b1 ENSMUST00000204090.2 ENCFF002DMZ, ENCFF048FGD, ENCFF051JGE, ENCFF084DCW, ENCFF089WMB, ENCFF221NAP, ENCFF327MSM, ENCFF452AXW, ENCFF502ANK, ENCFF570KYE, ENCFF575RUC, ENCFF836JVX, ENCFF885AJK, ENCFF888LGA, ENCFF197OUM, ENCFF302KQL, ENCFF334XFS, ENCFF383AJS, ENCFF407JTK, ENCFF538AIM, ENCFF565YJQ, ENCFF689ZLL, ENCFF894SHM, SRR3178206, SRR5643192 chr6 51448286 51448292 + Predicted SINE|Alu|B1F ENSMUSG00000029836.16, Cbx3 ENCFF575RUC, ENCFF605IFN, ENCFF444YCN, ENCFF632LPV, ENCFF962FIU, ENCFF361MLD, SRR11428467, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR6338004, SRR6904683, SRR6904685, SRR9080663, SRR9080664 chr6 51503494 51503495 + Predicted SINE|ID|ID4 ENSMUSG00000038301.16, Snx10 ENCFF138QRF, ENCFF221JIC, ENCFF334RGJ, ENCFF367BBB, ENCFF554PUC, ENCFF784LWT, ENCFF884TJE, ENCFF902GVX, ENCFF925ONP, ENCFF972IVS, ENCFF455DHP, ENCFF609ZVL, ENCFF116DGU, ENCFF220GKL, ENCFF285NFL chr6 51519624 51519625 + Predicted LTR|ERVL|RMER15 ENSMUSG00000038301.16, Snx10 ENCFF218HNK, ENCFF277XPM, ENCFF420RFN, ENCFF654BXL, ENCFF771YNG, ENCFF880FYC, ENCFF533DWD, ENCFF609ZVL, ENCFF055PZZ, ENCFF229CPV, ENCFF439HXQ, ENCFF578YPJ, ENCFF588JAU, ENCFF668SQN, ENCFF757JMT, ENCFF782CNW, ENCFF908MGO, ENCFF970PLY, ENCFF477YHR chr6 52135477 52135495 + Predicted LTR|ERVK|RLTR34B_MM ENSMUSG00000087658.3, Hotairm1 ENCFF001NCP, ENCFF001NCR, ENCFF001RTF, ENCFF001RTN, ENCFF002EZW, ENCFF007RPT, ENCFF027BYX, ENCFF059IQN, ENCFF104LLO, ENCFF121BYS, ENCFF139MHN, ENCFF179WPT, ENCFF189WYV, ENCFF207OVG, ENCFF214IUN, ENCFF225MMR, ENCFF296ASE, ENCFF310HPH, ENCFF326TQL, ENCFF371VGE, ENCFF404PYQ, ENCFF415KCJ, ENCFF478FDA, ENCFF482MUH, ENCFF504ULZ, ENCFF521IDK, ENCFF533JUU, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF625JLB, ENCFF723QIC, ENCFF808XFI, ENCFF841OXD, ENCFF865WQE, ENCFF896IIZ, ENCFF915FID, ENCFF935XRF, ENCFF951MOU, ENCFF989HJD, ENCFF993QUE, ENCFF996STG, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF143BIC, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF251WZA, ENCFF269WEZ, ENCFF284AEN, ENCFF315OOH, ENCFF339MSB, ENCFF364LFJ, ENCFF377LAC, ENCFF442FJC, ENCFF446FOZ, ENCFF521NCL, ENCFF573UIH, ENCFF581KUX, ENCFF608LAL, ENCFF609KQB, ENCFF657OJR, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF728TXU, ENCFF737OUQ, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF826RUZ, ENCFF834VIK, ENCFF838YLT, ENCFF845NXM, ENCFF854KNE, ENCFF862FYE, ENCFF912MUD, ENCFF923VUD, ENCFF933MOZ, ENCFF943XKB, ENCFF952BCB, ENCFF975NCY, ENCFF023TPS, ENCFF049SEE, ENCFF088SVK, ENCFF116QKZ, ENCFF133KGZ, ENCFF156XMZ, ENCFF157IFW, ENCFF172DMS, ENCFF235HER, ENCFF278JAU, ENCFF279EVY, ENCFF291SCS, ENCFF306OWL, ENCFF338LFG, ENCFF352KGC, ENCFF492HRC, ENCFF505WKA, ENCFF517EJZ, ENCFF552KEA, ENCFF598LJF, ENCFF611OFH, ENCFF619SKV, ENCFF689RQK, ENCFF693POR, ENCFF707HQI, ENCFF780UQU, ENCFF811ZQO, ENCFF869DVY, ENCFF966VVA, ENCFF983GRF, ENCFF999ZYF, ENCFF197NCG, ENCFF242SVY, ENCFF306ADU, ENCFF342GAL, ENCFF366CUG, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF555BQD, ENCFF667KKO, ENCFF715CAJ, ENCFF728WJB, ENCFF827NYZ, ENCFF906OAF, SRR2040601, SRR2927111 chr6 5397806 5397807 + Predicted SINE|Alu|PB1D7 ENSMUSG00000042607.16, Asb4 DRR091695, DRR091696, SRR10697197, SRR10697199, SRR11428469, SRR15198217, SRR15198221, SRR15198222, SRR2927112, SRR2927113, SRR9178976, SRR9178988, SRR9178989 chr6 56346567 56346620 - Annotated LTR|ERVK|RLTR27 ENSMUSG00000004347.18, Pde1c ENSMUST00000170774.8, ENSMUST00000168944.8, ENSMUST00000166890.8, ENSMUST00000203689.2, NM_001159955.1, NM_001159956.1, NM_001159957.1 ENCFF001NCP, ENCFF001NCR, ENCFF001RTJ, ENCFF002FAG, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR6904684, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 57537565 57537566 + Predicted LINE|L1|Lx8 ENSMUSG00000108112.2, Gm45193 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089647, SRR2089649 chr6 57785677 57785678 - Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000037788.15, Vopp1 ENCFF002EZW, ENCFF002EZY, ENCFF575RUC, ENCFF993QUE, ENCFF269SRJ, ENCFF304DLW, ENCFF379TZT, ENCFF572TOH, ENCFF595WXV, ENCFF967NOO, ENCFF348RRM chr6 58561888 58561963 + Predicted LTR|ERV1|RMER5 ENSMUSG00000029802.14, Abcg2 ENCFF002EZU, ENCFF002FAE, ENCFF002FAI, DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR5643190, SRR5643192, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9178983, SRR9178991 chr6 63646521 63646527 + Predicted LINE|L1|L1Lx_IV ENSMUSG00000071424.11, Grid2 SRR2089604, SRR2089606, SRR2089608, SRR2089609, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr6 66241139 66241140 + Annotated LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000107653.2, Gm31520 ENSMUST00000204874.2 chr6 66927624 66927625 + Predicted LINE|L1|L1MdF_V ENSMUSG00000036402.14, Gng12 ENCFF056GXQ, ENCFF133PEB, ENCFF641QXI, ENCFF793CWJ, ENCFF022ACG, ENCFF047LTH, ENCFF077CYB, ENCFF124SSE, ENCFF228CMT, ENCFF237HDL, ENCFF397ZQU, ENCFF417INY, ENCFF443URE, ENCFF524PAV, ENCFF548HOL, ENCFF620FXM, ENCFF696VQM, ENCFF735BVR, ENCFF753HNF, ENCFF858OFI, ENCFF875BUD chr6 69366763 69366771 - Predicted LTR|ERV1|LTRIS2 ENSMUSG00000076550.4, ENSMUSG00000076552.4, Igkv4-63, Igkv4-61 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 70533161 70533162 + Predicted LTR|ERVL-MaLR|MTB ENSMUSG00000105499.2, Igkv3-11 SRR2089607, SRR2089622, SRR2089637, SRR2089651 chr6 70658585 70658603 + Predicted LTR|ERVK|RLTR10C ENSMUSG00000094478.2, Igkv3-3 DRR091689, DRR091692, DRR091693, DRR091696, DRR091697, DRR091698, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2927113 chr6 70668000 70668001 + Predicted LINE|L1|L1MdMus_I ENSMUSG00000105646.3, Gm30211 SRR2089617, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089642, SRR2089643, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr6 71873378 71873407 - Predicted SINE|B2|B3A ENSMUSG00000063884.7, Ptcd3 ENCFF791ZDR, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428470, SRR15198222, SRR15198224, SRR15198226, SRR15198228, SRR2927113, SRR9080666, SRR9178976, SRR9178979, SRR9178980, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 72019511 72019512 - Annotated LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000108356.2, 9130221F21Rik ENSMUST00000206867.2, NR_046180.1 chr6 72081185 72081186 + Annotated LINE|L2|L2c ENSMUSG00000101823.2, Gm29438 ENSMUST00000191298.2 chr6 72099923 72099924 - Annotated LTR|ERVK|RLTR19-int ENSMUSG00000108709.2, 4933431G14Rik ENSMUST00000206696.2, NR_045163.1 SRR2927111, SRR2927112 chr6 72100053 72100054 - Predicted LTR|ERVK|RLTR19-int ENSMUSG00000108709.2, 4933431G14Rik DRR091697, SRR10697203, SRR13142121, SRR15198219, SRR15198221, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663 chr6 72100177 72100204 - Annotated LTR|ERVK|RLTR19-int ENSMUSG00000108709.2, 4933431G14Rik ENSMUST00000205571.2, NR_045165.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 72274669 72274670 + Predicted LINE|L1|L1M4 ENSMUSG00000056370.18, Sftpb ENCFF001NEC, ENCFF089PFT, ENCFF521IDK, ENCFF195JLT, ENCFF446FOZ, ENCFF186VNL, ENCFF260KJY, ENCFF499CDP chr6 72343590 72343591 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000055850.13, Rnf181 SRR10697199, SRR11428468, SRR9080662, SRR9080663, SRR9178977, SRR9178978, SRR9178979, SRR9178986, SRR9178991 chr6 72367789 72368005 - Predicted LINE|CR1|X7A_LINE ENSMUSG00000050732.10, Vamp8 ENCFF002ERU, ENCFF002EZW, ENCFF002FAI, ENCFF027IIP, ENCFF048IBL, ENCFF083BIG, ENCFF092YWY, ENCFF117BGT, ENCFF120DEX, ENCFF136POG, ENCFF138TOM, ENCFF147GLI, ENCFF151QHP, ENCFF160HKC, ENCFF218HNK, ENCFF221NAP, ENCFF229AIZ, ENCFF234MZC, ENCFF307VAF, ENCFF326TQL, ENCFF347UAC, ENCFF363XWU, ENCFF379JPQ, ENCFF385MVU, ENCFF393UZV, ENCFF420RFN, ENCFF494YXM, ENCFF495SQR, ENCFF521UGJ, ENCFF560YXX, ENCFF585YYC, ENCFF589MBR, ENCFF621PKT, ENCFF667FDW, ENCFF698LQF, ENCFF711WAC, ENCFF723KAG, ENCFF745HSV, ENCFF771LLL, ENCFF783MLO, ENCFF793IYH, ENCFF844QDN, ENCFF881UBL, ENCFF907HVO, ENCFF910ESY, ENCFF925ONP, ENCFF934ULS, ENCFF937GBW, ENCFF985BLV, ENCFF989HJD, ENCFF005GQR, ENCFF023MKT, ENCFF296VFB, ENCFF308FEA, ENCFF359GCY, ENCFF478KOR, ENCFF572TOH, ENCFF733MXU, ENCFF747XPP, ENCFF818BAS, ENCFF860XMD, ENCFF002ZAX, ENCFF004AEL, ENCFF019PVP, ENCFF028XDY, ENCFF050CMF, ENCFF052RNG, ENCFF054EOL, ENCFF088PZI, ENCFF090EUZ, ENCFF131VEF, ENCFF134PXJ, ENCFF134VWD, ENCFF142PTA, ENCFF156ZQH, ENCFF163GEC, ENCFF166UTY, ENCFF186NDY, ENCFF197JAP, ENCFF209RRO, ENCFF235HER, ENCFF240OIM, ENCFF255ESE, ENCFF267KZS, ENCFF334XFS, ENCFF338LFG, ENCFF376PQU, ENCFF377OQI, ENCFF378TYU, ENCFF389ZWR, ENCFF399YLV, ENCFF407JTK, ENCFF409ABB, ENCFF433QNW, ENCFF437ZSM, ENCFF456GLS, ENCFF468RDR, ENCFF469JWF, ENCFF478MHH, ENCFF492HRC, ENCFF498OHV, ENCFF513BRJ, ENCFF517BAY, ENCFF524FJG, ENCFF524PAV, ENCFF552LXG, ENCFF561CZI, ENCFF572SQL, ENCFF584ZUK, ENCFF596INO, ENCFF613SEJ, ENCFF618SIR, ENCFF637GVH, ENCFF643SBQ, ENCFF647KBV, ENCFF655KBW, ENCFF657NUT, ENCFF669PMR, ENCFF672WYO, ENCFF678CRA, ENCFF680OWA, ENCFF687GPO, ENCFF689ZLL, ENCFF696TTO, ENCFF705CES, ENCFF740WXS, ENCFF747VYT, ENCFF750IZJ, ENCFF755REI, ENCFF801SNQ, ENCFF812QQI, ENCFF817HZQ, ENCFF817NCH, ENCFF820JMO, ENCFF847HFJ, ENCFF848UMJ, ENCFF849PKR, ENCFF863ENS, ENCFF899EJT, ENCFF907KCF, ENCFF936LNA, ENCFF938CNS, ENCFF938XTE, ENCFF948YKH, ENCFF950FFF, ENCFF958LRX, ENCFF998BIQ, ENCFF062GNP, ENCFF248ELC, ENCFF260KJY, ENCFF302TQH, ENCFF423TSB, ENCFF494ZWE, ENCFF555BQD, ENCFF670VVN, ENCFF720MPJ, DRR091690, DRR091695, SRR13142120, SRR13142122, SRR15198226 chr6 72368764 72368870 - Predicted SINE|B2|B2_Mm2 ENSMUSG00000050732.10, Vamp8 ENCFF001NDZ, ENCFF001NEC, ENCFF106RGV, ENCFF114PSQ, ENCFF133PEB, ENCFF279BVM, ENCFF283XKV, ENCFF287KDR, ENCFF289WHW, ENCFF349LIW, ENCFF415KCJ, ENCFF439OFV, ENCFF524EDD, ENCFF552NWL, ENCFF554PUC, ENCFF605IFN, ENCFF654BXL, ENCFF672HUA, ENCFF704GEB, ENCFF734FHF, ENCFF784LWT, ENCFF795DLS, ENCFF858CRT, ENCFF881TID, ENCFF896IIZ, ENCFF914BRK, ENCFF962LFN, ENCFF972IVS, ENCFF024CUG, ENCFF034WGV, ENCFF068CQU, ENCFF082OML, ENCFF087XKQ, ENCFF118YHP, ENCFF124SSE, ENCFF133PKQ, ENCFF140WZW, ENCFF144EDQ, ENCFF155GUC, ENCFF192XJA, ENCFF194DAO, ENCFF223SMG, ENCFF228CMT, ENCFF239RQP, ENCFF254TFB, ENCFF260UQJ, ENCFF267VBU, ENCFF297PPT, ENCFF307OHZ, ENCFF308WGP, ENCFF420RGI, ENCFF437QAE, ENCFF453MPR, ENCFF486BJT, ENCFF527XBQ, ENCFF549IDH, ENCFF557JPW, ENCFF647RUH, ENCFF655CUI, ENCFF661UPO, ENCFF685GDB, ENCFF711OYQ, ENCFF711XWR, ENCFF753HNF, ENCFF758IOS, ENCFF759HJA, ENCFF765AQX, ENCFF814TTQ, ENCFF816CPX, ENCFF829HAB, ENCFF843WRN, ENCFF845NUY, ENCFF875BUD, ENCFF908MGO, ENCFF932XKS, ENCFF936DQW, ENCFF949QCF, ENCFF951GZB, SRR2927112 chr6 72398956 72398983 + Predicted DNA|TcMar-Tigger|Tigger5a_Glire ENSMUSG00000053460.9, Ggcx ENCFF002EZW, ENCFF195JLT, SRR2089604, SRR2089606, SRR2089607, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr6 72525652 72525653 + Predicted SINE|B4|ID_B1 ENSMUSG00000056737.15, Capg ENCFF273TLO, ENCFF304MIZ, ENCFF127KHN, ENCFF140WZW, ENCFF167GWU, ENCFF175LCC, ENCFF331YYO, ENCFF374VAZ, ENCFF376PQU, ENCFF403RPK, ENCFF420RGI, ENCFF438ROC, ENCFF464KYQ, ENCFF485GFE, ENCFF504PGI, ENCFF565FFU, ENCFF581ZWM, ENCFF657NUT, ENCFF772QLP, ENCFF781MKK, ENCFF869MFM, ENCFF894COY, ENCFF910CTW, ENCFF956RCJ, ENCFF985NHB chr6 72594372 72594383 - Predicted SINE|B2|B3A ENSMUSG00000056429.5, Tgoln1 ENCFF017LOD, ENCFF532UKS, ENCFF014SLC, DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198226, SRR2040601, SRR2927112, SRR2927113, SRR9080662, SRR9080665, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 72606271 72606272 + Annotated LTR|ERVL-MaLR|MTEb ENSMUSG00000072999.10, Gm15401 ENSMUST00000156497.8, NR_040422.1 SRR15198221 chr6 73585633 73585656 - Annotated LTR|ERVK|RMER17A ENSMUSG00000107441.2, Gm31747 ENSMUST00000204638.2, NR_157242.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697199, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198221, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr6 81872319 81872320 - Annotated SINE|B4|ID_B1 ENSMUSG00000108194.2, 1700097M23Rik ENSMUST00000204079.2 chr6 82782082 82782083 - Annotated DNA|hAT-Tip100|MER45B ENSMUSG00000109556.3, Gm38843 ENSMUST00000209189.3 ENCFF059IQN, ENCFF102BWR, ENCFF450WAV, ENCFF670CXH, ENCFF933UPG, ENCFF993QUE, ENCFF996STG, ENCFF023MKT, ENCFF234LUQ, ENCFF455DHP, ENCFF609ZVL, ENCFF970VKB, ENCFF128CYW, ENCFF267KZS, ENCFF430ERW, ENCFF512XKX, ENCFF994PPZ chr6 83504738 83504792 - Annotated LTR|ERVK|RMER4A ENSMUSG00000059430.15, Actg2 ENSMUST00000152029.2 DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643191, SRR5643192, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178978, SRR9178980, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr6 83504913 83504998 - Annotated LTR|ERVK|RMER4A ENSMUSG00000059430.15, Actg2 ENSMUST00000121731.8 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428469, SRR11428470, SRR13142118, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 83739471 83739609 - Annotated SINE|Alu|PB1D10 ENSMUSG00000099354.7, 1700124L16Rik ENSMUST00000189129.6, NR_105027.1 DRR091688, DRR091689, DRR091690, DRR091692, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr6 85938791 85938792 - Predicted LTR|ERV1|MURVY-LTR ENSMUSG00000030002.16, Dusp11 ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAI, ENCFF107XGE, ENCFF192NVI, ENCFF307VAF, ENCFF521IDK, ENCFF533CLY, ENCFF704GEB, ENCFF881TID, ENCFF962LFN, ENCFF084CWD, ENCFF115LWP, ENCFF134HVE, ENCFF173IVH, ENCFF234LUQ, ENCFF377UGQ, ENCFF510LAE, ENCFF510TTU, ENCFF567AFB, ENCFF573UIH, ENCFF592GVA, ENCFF608LAL, ENCFF632LPV, ENCFF643XFK, ENCFF721ASG, ENCFF747XPP, ENCFF829RHM, ENCFF862FYE, ENCFF886BRO, ENCFF967NOO, ENCFF049WBL, ENCFF095NMU, ENCFF134PXJ, ENCFF175LCC, ENCFF324ITL, ENCFF338LFG, ENCFF371ZDG, ENCFF426ZCK, ENCFF483KXD, ENCFF597BNT, ENCFF647RUH, ENCFF779MMO, ENCFF781MKK, ENCFF916BSM, ENCFF927LFD, ENCFF014SLC, ENCFF277QHC, ENCFF302TQH, ENCFF344OJQ, ENCFF494ZWE, ENCFF592WZB, ENCFF670VVN, ENCFF733LFV, ENCFF827NYZ, SRR11428467, SRR6904683, SRR9178983 chr6 85938908 85939002 - Predicted LTR|ERV1|MURVY-LTR ENSMUSG00000030002.16, Dusp11 ENCFF001RTD, ENCFF001RTJ, ENCFF001RTN, ENCFF426QFT, ENCFF495SQR, ENCFF533CLY, ENCFF710DAI, ENCFF027RRZ, ENCFF033ZUH, ENCFF065LOT, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF143BIC, ENCFF170XMM, ENCFF173IVH, ENCFF199IRM, ENCFF234LUQ, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF269WEZ, ENCFF284AEN, ENCFF339MSB, ENCFF369YLA, ENCFF394BDJ, ENCFF408NBX, ENCFF442FJC, ENCFF446FOZ, ENCFF468AKL, ENCFF510LAE, ENCFF516BTG, ENCFF521NCL, ENCFF567AFB, ENCFF573UIH, ENCFF581KUX, ENCFF592GVA, ENCFF608LAL, ENCFF609KQB, ENCFF643XFK, ENCFF651SDJ, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF704WWK, ENCFF721ASG, ENCFF728TXU, ENCFF737OUQ, ENCFF747XPP, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF785TEQ, ENCFF826RUZ, ENCFF829RHM, ENCFF838YLT, ENCFF840XYZ, ENCFF854KNE, ENCFF862FYE, ENCFF912MUD, ENCFF914YDJ, ENCFF923VUD, ENCFF933MOZ, ENCFF943XKB, ENCFF952BCB, ENCFF964WZW, ENCFF975NCY, ENCFF068CQU, ENCFF134PXJ, ENCFF672WYO, ENCFF014SLC, ENCFF160TQC, ENCFF197NCG, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF442OKF, ENCFF454JTI, ENCFF481CFU, ENCFF517DCU, ENCFF555BQD, ENCFF592WZB, ENCFF667KKO, ENCFF716YKR, ENCFF723MAR, ENCFF733LFV, ENCFF803OIY, ENCFF827NYZ, ENCFF970VKL, DRR091688, DRR091693, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697199, SRR10697201, SRR11428467, SRR15198217, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR6338004, SRR9080666 chr6 86493186 86493282 - Annotated SINE|MIR|MIR3 ENSMUSG00000107689.3, Gm44386 ENSMUST00000204288.3 ENCFF002FAA, ENCFF002FAC, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF151YNV, ENCFF170XMM, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF236TUH, ENCFF245ZOR, ENCFF261ZZF, ENCFF270ERO, ENCFF304DLW, ENCFF315OOH, ENCFF369YLA, ENCFF377LAC, ENCFF390NKP, ENCFF391UFN, ENCFF429BQZ, ENCFF444YCN, ENCFF446FOZ, ENCFF467LJD, ENCFF484HRX, ENCFF510LAE, ENCFF516BTG, ENCFF519YGA, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF642YTY, ENCFF643XFK, ENCFF651SDJ, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF756QCA, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF829RHM, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF854KNE, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF920FVY, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF964WZW, ENCFF969WLB, ENCFF975NCY, ENCFF978EQI, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF254YNR, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF517DCU, ENCFF555BQD, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF667KKO, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF827NYZ, ENCFF888IIL, ENCFF906OAF, DRR091689, SRR15198217, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr6 86986733 86986734 + Predicted LINE|L1|Lx7 ENSMUSG00000029993.17, ENSMUSG00000057230.15, Nfu1, Aak1 ENCFF001NCR, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF002EZY, ENCFF007RPT, ENCFF089PFT, ENCFF121OLG, ENCFF126HTW, ENCFF206EGD, ENCFF210BCB, ENCFF251TMY, ENCFF264DCN, ENCFF308LTO, ENCFF437AJW, ENCFF439OFV, ENCFF504ULZ, ENCFF521IDK, ENCFF533JUU, ENCFF564OKH, ENCFF564YPB, ENCFF585YYC, ENCFF589REP, ENCFF641QXI, ENCFF670CXH, ENCFF696TCH, ENCFF849GVQ, ENCFF922KQY, ENCFF989HJD, ENCFF017LOD, ENCFF199IRM, ENCFF234LUQ, ENCFF251WZA, ENCFF271OHB, ENCFF455DHP, ENCFF478KOR, ENCFF500QZK, ENCFF657FNE, ENCFF933MOZ, ENCFF945ICZ, ENCFF962FIU, ENCFF014CMK, ENCFF057FFG, ENCFF065ZIE, ENCFF118YHP, ENCFF131VEF, ENCFF178ZXW, ENCFF197TJB, ENCFF268ZHE, ENCFF296UDD, ENCFF344VGL, ENCFF348RRM, ENCFF359DNK, ENCFF387BVS, ENCFF429ZEH, ENCFF454DOT, ENCFF459TYQ, ENCFF512XKX, ENCFF541HSQ, ENCFF591WVP, ENCFF615ULR, ENCFF633QXI, ENCFF698WQO, ENCFF712BKP, ENCFF769FVU, ENCFF801SNQ, ENCFF809QBQ, ENCFF877VSZ, ENCFF953FGT, ENCFF956ZKG, ENCFF958BIE, ENCFF075EMK, ENCFF119IHT, ENCFF302TQH, ENCFF442OKF, ENCFF510IAG, ENCFF525QIM, ENCFF574YMK, ENCFF670VVN, ENCFF749STK, ENCFF854IBU, SRR10697200, SRR11428469, SRR2927113, SRR9178987 chr6 87081728 87081731 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000090891.4, D6Ertd527e ENSMUST00000170124.4, ENSMUST00000204927.2, ENSMUST00000203747.2, NM_001167938.1, NM_001167937.1 chr6 88827551 88827556 - Predicted LTR|ERVL-MaLR|MTEa ENSMUSG00000033152.14, Podxl2 DRR091690, DRR091694, DRR091698, SRR10697197, SRR10697200, SRR15198222, SRR2927112, SRR2927113, SRR9178977, SRR9178980, SRR9178982, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr6 90273204 90273205 + Annotated LTR|ERVK|IAP1-MM_LTR ENSMUSG00000108119.2, Gm43891 ENSMUST00000205132.2 chr6 91926270 91926271 + Predicted LTR|ERVL-MaLR|MLT1A0 ENSMUSG00000034063.9, 4930590J08Rik SRR3178204, SRR3178205, SRR6904684, SRR6904685 chr6 93169091 93169092 + Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000097462.9, 9530026P05Rik ENCFF002EZW, ENCFF065TCZ, ENCFF247QZW, ENCFF510TTU, ENCFF572TOH, ENCFF592GVA, ENCFF654AEJ, ENCFF686KMX, ENCFF808PVJ, SRR15198221 chr6 94494456 94494464 + Predicted SINE|Alu|PB1D9 ENSMUSG00000045100.12, Slc25a26 DRR091688, DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428470, SRR13142119, SRR13142121, SRR13142122, SRR15198217, SRR15198220, SRR15198223, SRR15198227, SRR15198228, SRR9178979, SRR9178981, SRR9178982, SRR9178985 chr6 97415612 97415644 - Predicted SINE|Alu|B1_Mur3 ENSMUSG00000030064.17, Frmd4b ENCFF074HUJ, ENCFF151QHP, ENCFF229AIZ, ENCFF251TMY, ENCFF291LRG, ENCFF349LIW, ENCFF363XWU, ENCFF401HCS, ENCFF453XOG, ENCFF494YXM, ENCFF519IZA, ENCFF639RWJ, ENCFF672HUA, ENCFF917RNE, ENCFF942WIP, ENCFF951UXE, ENCFF985BLV, ENCFF009AVK, ENCFF019PWU, ENCFF034WGV, ENCFF067OYG, ENCFF080DNG, ENCFF089SWU, ENCFF090EUZ, ENCFF143RTP, ENCFF209RRO, ENCFF310BWG, ENCFF311MZV, ENCFF366IEQ, ENCFF370VOV, ENCFF386CRY, ENCFF478MHH, ENCFF497NJW, ENCFF603QSQ, ENCFF613SEJ, ENCFF637GVH, ENCFF657NUT, ENCFF669PMR, ENCFF696TTO, ENCFF706BUS, ENCFF829HAB, ENCFF853PNO, ENCFF900LFN, ENCFF916BSM, ENCFF916JWW, ENCFF927LFD, ENCFF939UBM, ENCFF997QQG chr6 97422665 97422694 - Predicted LINE|L2|L2a ENSMUSG00000030064.17, Frmd4b ENCFF056GXQ, ENCFF082HKQ, ENCFF114PSQ, ENCFF196PBF, ENCFF262WAE, ENCFF264RIV, ENCFF352VWM, ENCFF415KCJ, ENCFF540XSD, ENCFF654BXL, ENCFF686EWL, ENCFF727WWV, ENCFF734FHF, ENCFF771LLL, ENCFF881TID, ENCFF925ONP, ENCFF931HCN, ENCFF960LQP, ENCFF014CMK, ENCFF039DES, ENCFF134PXJ, ENCFF198XFF, ENCFF203EWG, ENCFF209LBA, ENCFF210BVU, ENCFF221ZQB, ENCFF242MZE, ENCFF275TCB, ENCFF277JGD, ENCFF307OHZ, ENCFF378TYU, ENCFF404HLB, ENCFF429ZEH, ENCFF456GLS, ENCFF464KYQ, ENCFF466RIS, ENCFF479WHZ, ENCFF483KXD, ENCFF517BAY, ENCFF518TUP, ENCFF529LEZ, ENCFF537DSI, ENCFF561CZI, ENCFF620FXM, ENCFF632HDE, ENCFF643SBQ, ENCFF673BPE, ENCFF699SBZ, ENCFF711OYQ, ENCFF758IOS, ENCFF814PHK, ENCFF847IGW, ENCFF894COY, ENCFF908MGO, ENCFF917KUH, ENCFF938CNS, ENCFF939QLN, ENCFF949QCF, ENCFF950FFF, ENCFF951GZB, ENCFF951PCM, ENCFF974XWJ, ENCFF984QED chr6 97427360 97427361 - Predicted LINE|L1|L1MdMus_I ENSMUSG00000030064.17, Frmd4b ENCFF092YWY, ENCFF279BVM, ENCFF308LTO, ENCFF755IDE, ENCFF881UBL, ENCFF914BRK, ENCFF003GJV, ENCFF088PZI, ENCFF106GHS, ENCFF107YGR, ENCFF194DAO, ENCFF260UQJ, ENCFF552LXG, ENCFF573WSG, ENCFF875BUD, ENCFF903KDM, ENCFF910CTW, ENCFF996WVL chr6 99404702 99404703 - Predicted SINE|B4|B4A ENSMUSG00000030068.5, Gm20696 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650 chr7 100088960 100088961 + Predicted DNA|hAT-Charlie|RCHARR1 ENSMUSG00000047248.21, C2cd3 SRR2089610, SRR2089611, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089633, SRR2089634 chr7 100089294 100089295 + Predicted DNA|hAT-Charlie|RCHARR1 ENSMUSG00000047248.21, C2cd3 ENCFF002EZY, ENCFF002FAE, ENCFF106GQS, ENCFF450WAV, ENCFF452AXW, ENCFF502ANK, ENCFF793IYH, ENCFF993QUE, ENCFF233IFH, ENCFF304DLW, ENCFF721ASG, ENCFF747XPP, ENCFF920FVY, ENCFF507VMW, ENCFF446LMP, SRR2089603, SRR2089605, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chr7 100419005 100419006 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000097388.2, Gm3200 DRR091693, DRR091698, SRR10697198, SRR10697199, SRR11428467, SRR11428468, SRR11428469, SRR15198217, SRR15198220, SRR15198221, SRR15198226, SRR15198227, SRR15198228, SRR2927113, SRR9178977, SRR9178978, SRR9178983, SRR9178985 chr7 100881286 100881287 + Predicted LINE|L1|L1M4 ENSMUSG00000030691.16, Fchsd2 SRR2089612, SRR2089647, SRR2089650, SRR2089651 chr7 100887321 100887322 + Predicted LINE|L1|L1M4 ENSMUSG00000030691.16, Fchsd2 SRR2089605, SRR2089614, SRR2089615, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089635, SRR2089642, SRR2089649 chr7 101030108 101030197 + Predicted SINE|Alu|B1_Mm ENSMUSG00000032812.19, Arap1 ENCFF179WPT, ENCFF205GJI, ENCFF206EGD, ENCFF212ZXS, ENCFF225MMR, ENCFF330LWU, ENCFF347UAC, ENCFF497YRP, ENCFF564YPB, ENCFF622NXP, ENCFF745HSV, ENCFF783MLO, ENCFF787LWL, ENCFF794FBC, ENCFF858CRT, ENCFF880FYC, ENCFF922KQY, ENCFF925ONP, ENCFF931HCN, ENCFF962LFN, ENCFF027QGO, ENCFF077YZF, ENCFF080BTV, ENCFF117ZMM, ENCFF134VWD, ENCFF142PTA, ENCFF163BDT, ENCFF276OPJ, ENCFF344VGL, ENCFF347EUO, ENCFF382VCK, ENCFF414IHO, ENCFF437ZSM, ENCFF438ROC, ENCFF443URE, ENCFF450CUC, ENCFF512LAN, ENCFF558UDY, ENCFF584ZUK, ENCFF612KDP, ENCFF680OWA, ENCFF681EEO, ENCFF687GPO, ENCFF694EPZ, ENCFF695XIY, ENCFF696TTO, ENCFF700IPC, ENCFF740WXS, ENCFF742DJH, ENCFF755REI, ENCFF781XUM, ENCFF789AOM, ENCFF790WIY, ENCFF794GVC, ENCFF804EWD, ENCFF818ZJQ, ENCFF851JLX, ENCFF875BUD, ENCFF885ZAO, ENCFF903ULI, ENCFF952FJN, ENCFF985NHB chr7 101197074 101197115 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000120140.1, Gm19765 ENSMUST00000244644.1, ENSMUST00000241795.1, ENSMUST00000241568.1, NR_166075.1 ENCFF001RTD, ENCFF001RTN, ENCFF022FSI, ENCFF027IIP, ENCFF043JGD, ENCFF051PTY, ENCFF056GXQ, ENCFF064PBF, ENCFF074HTO, ENCFF083CUR, ENCFF084PUC, ENCFF086ZMV, ENCFF091WMS, ENCFF094CCP, ENCFF104LLO, ENCFF106RGV, ENCFF115KZV, ENCFF120DEX, ENCFF121BYS, ENCFF125HRQ, ENCFF126HTW, ENCFF126RJS, ENCFF133PEB, ENCFF139MHN, ENCFF140VGY, ENCFF143PHU, ENCFF147GLI, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF206EGD, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF225MMR, ENCFF227OTT, ENCFF261OTH, ENCFF262URV, ENCFF289WHW, ENCFF297CWJ, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF344LNZ, ENCFF345OIF, ENCFF352VWM, ENCFF358UFZ, ENCFF363XWU, ENCFF371VGE, ENCFF381JXP, ENCFF392TDB, ENCFF400XLQ, ENCFF404PYQ, ENCFF415KCJ, ENCFF421SNO, ENCFF432ZLQ, ENCFF439OFV, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF514BEA, ENCFF527VIY, ENCFF533JUU, ENCFF534DID, ENCFF552NWL, ENCFF585YYC, ENCFF589REP, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF654BXL, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF704GEB, ENCFF707QJV, ENCFF711WAC, ENCFF734FHF, ENCFF743QXJ, ENCFF761RKP, ENCFF771LLL, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793STU, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF865WQE, ENCFF876MJS, ENCFF878SQO, ENCFF886XAI, ENCFF896IIZ, ENCFF896MQK, ENCFF912RLS, ENCFF922KQY, ENCFF931DDH, ENCFF933UPG, ENCFF934ZAP, ENCFF951MOU, ENCFF956WVJ, ENCFF970JWC, ENCFF991TPB, ENCFF993QUE, ENCFF017LOD, ENCFF195JLT, ENCFF234LUQ, ENCFF345BBC, ENCFF609ZVL, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF009AVK, ENCFF022ACG, ENCFF023TPS, ENCFF024CUG, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF049SEE, ENCFF049WBL, ENCFF054EOL, ENCFF056UGH, ENCFF057MDU, ENCFF060FGD, ENCFF061WTN, ENCFF065ZIE, ENCFF068CQU, ENCFF068KDU, ENCFF070YMI, ENCFF082OML, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF090EUZ, ENCFF095NMU, ENCFF098AYQ, ENCFF106RLX, ENCFF107YGR, ENCFF111MWQ, ENCFF116DGU, ENCFF116QKZ, ENCFF118PQI, ENCFF118YHP, ENCFF124SSE, ENCFF136TYP, ENCFF137OYQ, ENCFF142PTA, ENCFF151XBP, ENCFF155GUC, ENCFF156XMZ, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF167GWU, ENCFF170KWW, ENCFF175LCC, ENCFF177SGB, ENCFF178ZXW, ENCFF184ALY, ENCFF189JVE, ENCFF194DAO, ENCFF197TJB, ENCFF198XFF, ENCFF203EWG, ENCFF205CDI, ENCFF208BJY, ENCFF209RRO, ENCFF223SMG, ENCFF229TCX, ENCFF235HER, ENCFF237JCE, ENCFF239RQP, ENCFF243LBQ, ENCFF247VEN, ENCFF256UWN, ENCFF258WLS, ENCFF267VBU, ENCFF268YSJ, ENCFF268ZHE, ENCFF271RFU, ENCFF275HRX, ENCFF279EVY, ENCFF280LCC, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF303BIV, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF313IFI, ENCFF315HBU, ENCFF319YFJ, ENCFF331YYO, ENCFF332IRR, ENCFF335UNU, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF359DNK, ENCFF369VAI, ENCFF374VAZ, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF386XTQ, ENCFF387BVS, ENCFF390AUP, ENCFF394AUR, ENCFF397ZQU, ENCFF403CRC, ENCFF404HLB, ENCFF406NLL, ENCFF411YXB, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF424GQM, ENCFF426FAF, ENCFF426ZCK, ENCFF429TQT, ENCFF429ZEH, ENCFF439BEV, ENCFF454DOT, ENCFF459TYQ, ENCFF462HZM, ENCFF468RDR, ENCFF470RDW, ENCFF478YRJ, ENCFF486BJT, ENCFF490ULA, ENCFF497KLL, ENCFF498OHV, ENCFF505PJK, ENCFF505WKA, ENCFF513BRJ, ENCFF517BAY, ENCFF518TUP, ENCFF524PAV, ENCFF527XBQ, ENCFF529LEZ, ENCFF538ZTW, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF558UDY, ENCFF563FUC, ENCFF565CON, ENCFF565DII, ENCFF565FFU, ENCFF576EOD, ENCFF578MOR, ENCFF591WVP, ENCFF593TQB, ENCFF595NMM, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF614WCH, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF633QXI, ENCFF635XED, ENCFF637GVH, ENCFF640RWH, ENCFF651HEM, ENCFF655CUI, ENCFF655KBW, ENCFF657NUT, ENCFF661UPO, ENCFF673BPE, ENCFF680OWA, ENCFF685FUZ, ENCFF685GDB, ENCFF693POR, ENCFF698WQO, ENCFF699SBZ, ENCFF700IPC, ENCFF706BUS, ENCFF707HQI, ENCFF711OYQ, ENCFF711XWR, ENCFF712BKP, ENCFF713JXV, ENCFF724VJN, ENCFF735BVR, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF742DJH, ENCFF747VYT, ENCFF751QWY, ENCFF753HNF, ENCFF755REI, ENCFF758IOS, ENCFF765UBL, ENCFF769FVU, ENCFF780UQU, ENCFF782CNW, ENCFF790WIY, ENCFF791ZDR, ENCFF809QBQ, ENCFF811ZQO, ENCFF812LAI, ENCFF812QQI, ENCFF814PHK, ENCFF816CPX, ENCFF820JMO, ENCFF821HAZ, ENCFF832FTK, ENCFF834TQY, ENCFF843WRN, ENCFF847HFJ, ENCFF848UMJ, ENCFF849PKR, ENCFF851JLX, ENCFF854LJN, ENCFF860SGX, ENCFF863ENS, ENCFF867FTP, ENCFF869DVY, ENCFF875BUD, ENCFF877VSZ, ENCFF899EJT, ENCFF903KDM, ENCFF904KCQ, ENCFF908MGO, ENCFF910CTW, ENCFF916JWW, ENCFF917KUH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF931NMQ, ENCFF936DQW, ENCFF936LNA, ENCFF938XTE, ENCFF948BDY, ENCFF949QCF, ENCFF956ZKG, ENCFF958BIE, ENCFF970WCD, ENCFF974XWJ, ENCFF986DZE, ENCFF994PPZ, ENCFF996AOW, ENCFF996WVL, ENCFF998BIQ, ENCFF178HDG, ENCFF477YHR chr7 101480680 101480681 - Predicted LINE|L2|AmnL2-1 ENSMUSG00000032737.14, Inppl1 ENCFF002EZY, ENCFF002FAA, ENCFF450WAV, ENCFF696TCH, ENCFF197OUM chr7 101487378 101487548 - Annotated LINE|L2|L2-2_Mam ENSMUSG00000032737.14, Inppl1 ENSMUST00000035836.14, NM_010567.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAG, ENCFF027BYX, ENCFF051PTY, ENCFF074HUJ, ENCFF094CCP, ENCFF102AMK, ENCFF104LLO, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF121BYS, ENCFF121OLG, ENCFF140VGY, ENCFF159OVE, ENCFF162UVS, ENCFF178PMH, ENCFF186RYS, ENCFF189WYV, ENCFF218HNK, ENCFF296ASE, ENCFF297BEX, ENCFF308LTO, ENCFF331WKS, ENCFF351JWR, ENCFF352VWM, ENCFF363CYZ, ENCFF371VGE, ENCFF393YET, ENCFF403ORF, ENCFF449MIK, ENCFF462ABU, ENCFF470MXU, ENCFF482MUH, ENCFF514JOV, ENCFF521IDK, ENCFF522VLI, ENCFF533JUU, ENCFF534DID, ENCFF535YBP, ENCFF564OKH, ENCFF621PKT, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF686EWL, ENCFF696TCH, ENCFF707QJV, ENCFF725RXU, ENCFF745HSV, ENCFF755FCM, ENCFF761RKP, ENCFF771LLL, ENCFF787LWL, ENCFF852ZDB, ENCFF865WQE, ENCFF881TID, ENCFF915FID, ENCFF917RNE, ENCFF931PFF, ENCFF935XRF, ENCFF996STG, ENCFF013CHH, ENCFF052WUB, ENCFF060JCS, ENCFF101BDM, ENCFF222GPK, ENCFF236TUH, ENCFF269WEZ, ENCFF284AEN, ENCFF304DLW, ENCFF364LFJ, ENCFF390NKP, ENCFF394BDJ, ENCFF446FOZ, ENCFF487DYP, ENCFF510TTU, ENCFF521NCL, ENCFF572TOH, ENCFF573UIH, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF632LPV, ENCFF636NES, ENCFF657OJR, ENCFF704WWK, ENCFF737OUQ, ENCFF744OEI, ENCFF768ZCF, ENCFF808PVJ, ENCFF831ISX, ENCFF840XYZ, ENCFF854MWX, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF933MOZ, ENCFF962FIU, ENCFF962OCF, ENCFF978EQI, ENCFF004AEL, ENCFF028XDY, ENCFF030IFE, ENCFF037IZV, ENCFF041PJP, ENCFF049SEE, ENCFF050CMF, ENCFF057FFG, ENCFF061WTN, ENCFF070YMI, ENCFF077CYB, ENCFF083IRL, ENCFF088PZI, ENCFF088SVK, ENCFF094RHV, ENCFF103SQR, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF127KHN, ENCFF128CYW, ENCFF149BQJ, ENCFF167EHX, ENCFF177SGB, ENCFF179HJV, ENCFF197TJB, ENCFF199AAD, ENCFF254VIN, ENCFF267KZS, ENCFF278JAU, ENCFF299ENO, ENCFF315OFF, ENCFF321NRW, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF353SEU, ENCFF357QTB, ENCFF376PQU, ENCFF380LXU, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF403RPK, ENCFF404HLB, ENCFF408FFP, ENCFF409ABB, ENCFF417OEG, ENCFF426ETE, ENCFF429TQT, ENCFF429ZEH, ENCFF430ERW, ENCFF459TYQ, ENCFF466RIS, ENCFF469JWF, ENCFF476JSK, ENCFF478YRJ, ENCFF497KLL, ENCFF517EJZ, ENCFF524FJG, ENCFF530DUT, ENCFF538TFM, ENCFF563FUC, ENCFF573WSG, ENCFF578PSU, ENCFF578YPJ, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF619SKV, ENCFF627XGF, ENCFF644EGG, ENCFF655CUI, ENCFF656DRS, ENCFF673GRZ, ENCFF685GDB, ENCFF693POR, ENCFF707HQI, ENCFF712BKP, ENCFF727EPG, ENCFF727JTZ, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF769FVU, ENCFF786BUI, ENCFF801SNQ, ENCFF806XNV, ENCFF817HZQ, ENCFF819JGD, ENCFF821HAZ, ENCFF838BEV, ENCFF840DKD, ENCFF863LMG, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF903KDM, ENCFF916JWW, ENCFF932XKS, ENCFF952LUC, ENCFF956ZKG, ENCFF958BIE, ENCFF983GRF, ENCFF998BIQ, ENCFF242SVY, ENCFF361MLD, ENCFF399XUL, ENCFF592WZB, ENCFF670VVN, ENCFF733LFV, ENCFF803OIY, ENCFF888IIL, ENCFF932SOZ, ENCFF970VKL, SRR13142121, SRR15198220, SRR15198223, SRR15198224, SRR15198225, SRR2040601, SRR6338004, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 101570389 101570432 - Annotated SINE|MIR|MIR1_Amn ENSMUSG00000064307.14, Lrrc51 ENSMUST00000106968.8, ENSMUST00000106967.8, ENSMUST00000106965.8, ENSMUST00000098236.9, NM_001357584.1 ENCFF519YGA, ENCFF955YCX, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697199, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643199, SRR6338004, SRR6904685, SRR9080662, SRR9080663, SRR9080665, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178985, SRR9178986, SRR9178987, SRR9178990, SRR9178992 chr7 101721633 101721664 - Predicted SINE|Alu|B1F ENSMUSG00000070426.13, Rnf121 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 102297837 102297838 - Predicted LINE|L1|L1MdF_III ENSMUSG00000110251.2, Gm2996 DRR091688, DRR091691, DRR091693, DRR091697, DRR091698, DRR091699, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198225, SRR15198228, SRR9178978, SRR9178992 chr7 103316088 103316089 - Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000045780.4, Or51v8 SRR2089623, SRR2089631, SRR2089634 chr7 103960292 103960295 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000066258.14, Trim12a ENCFF143PHU, ENCFF057MDU, ENCFF255XDN, ENCFF374VAZ, ENCFF407JTK, ENCFF450CUC, ENCFF484PQK, ENCFF538AIM, ENCFF661UPO, ENCFF673BPE, ENCFF742DJH, ENCFF770WIT, ENCFF881YOK, ENCFF883APB, ENCFF904KCQ, ENCFF984QED chr7 103965236 103965237 - Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000066258.14, Trim12a ENCFF001NCP, ENCFF027BYX, ENCFF262WAE, ENCFF379JPQ, ENCFF450WAV, ENCFF554PUC, ENCFF564YPB, ENCFF711WAC, ENCFF844QDN, ENCFF934ZAP, ENCFF956WVJ, ENCFF989HJD, ENCFF993QUE, ENCFF455DHP, ENCFF532UKS, ENCFF024CUG, ENCFF237HDL, ENCFF321NRW, ENCFF347EUO, ENCFF507VMW, ENCFF541HSQ, ENCFF559QXN, ENCFF661TOM, ENCFF847IGW, ENCFF883APB, ENCFF966VVA, ENCFF574YMK, ENCFF854IBU chr7 103965362 103965363 - Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000066258.14, Trim12a ENCFF102BWR, ENCFF114PSQ, ENCFF179WPT, ENCFF287KDR, ENCFF771YNG, ENCFF993QUE, ENCFF017LOD, ENCFF195JLT, ENCFF140WZW, ENCFF141YUD, ENCFF157IFW, ENCFF237HDL, ENCFF321NRW, ENCFF335UNU, ENCFF347EUO, ENCFF348RRM, ENCFF376PQU, ENCFF507VMW, ENCFF529LEZ, ENCFF779MMO, ENCFF834TQY, ENCFF838BEV, ENCFF847IGW, ENCFF875BUD, ENCFF903KDM, ENCFF062GNP, ENCFF260KJY chr7 103965478 103965517 - Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000060441.16, ENSMUSG00000066258.14, Trim5, Trim12a ENCFF059IQN, ENCFF106RGV, ENCFF114PSQ, ENCFF116MYR, ENCFF147GLI, ENCFF179WPT, ENCFF287KDR, ENCFF332ZPO, ENCFF489VZI, ENCFF495SQR, ENCFF585YYC, ENCFF723KAG, ENCFF771YNG, ENCFF783MLO, ENCFF812CUD, ENCFF881UBL, ENCFF922KQY, ENCFF924VRI, ENCFF962LFN, ENCFF195JLT, ENCFF274ESJ, ENCFF087IUJ, ENCFF140WZW, ENCFF141YUD, ENCFF149DFF, ENCFF175LCC, ENCFF203EWG, ENCFF332RWQ, ENCFF335UNU, ENCFF348RRM, ENCFF357AGP, ENCFF358UHV, ENCFF443URE, ENCFF478MHH, ENCFF529LEZ, ENCFF673BPE, ENCFF713JXV, ENCFF726YTS, ENCFF750IZJ, ENCFF765AQX, ENCFF790WIY, ENCFF834TET, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF851JLX, ENCFF858OFI, ENCFF875BUD, ENCFF917KUH, ENCFF927LFD, ENCFF951PCM, ENCFF970WCD, ENCFF062GNP chr7 103965569 103965570 - Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000066258.14, Trim12a ENCFF059IQN, ENCFF106RGV, ENCFF116MYR, ENCFF147GLI, ENCFF332ZPO, ENCFF489VZI, ENCFF495SQR, ENCFF585YYC, ENCFF698LQF, ENCFF723KAG, ENCFF783MLO, ENCFF812CUD, ENCFF881UBL, ENCFF922KQY, ENCFF924VRI, ENCFF962LFN, ENCFF274ESJ, ENCFF945ICZ, ENCFF087IUJ, ENCFF149DFF, ENCFF175LCC, ENCFF203EWG, ENCFF332RWQ, ENCFF357AGP, ENCFF358UHV, ENCFF443URE, ENCFF478MHH, ENCFF655CUI, ENCFF673BPE, ENCFF713JXV, ENCFF726YTS, ENCFF741PLM, ENCFF750IZJ, ENCFF765AQX, ENCFF790WIY, ENCFF834TET, ENCFF840DKD, ENCFF851JLX, ENCFF858OFI, ENCFF917KUH, ENCFF927LFD, ENCFF951PCM, ENCFF970WCD, ENCFF302TQH, ENCFF499GDC, ENCFF904RJF chr7 103965945 103965946 - Predicted SINE|B4|ID_B1 ENSMUSG00000066258.14, Trim12a ENCFF279BVM, ENCFF283XKV, ENCFF291LRG, ENCFF376MQF, ENCFF605IFN, ENCFF643VPC, ENCFF985BLV, ENCFF028XDY, ENCFF149BQJ, ENCFF261EQP, ENCFF537DSI, ENCFF561CZI, ENCFF791ZDR, ENCFF849PKR, ENCFF958BIE chr7 103967041 103967042 + Predicted LTR|ERVK|RMER19B2 ENSMUSG00000087175.9, Gm15133 ENCFF102BWR, ENCFF450WAV, ENCFF711WAC, ENCFF775RSS, ENCFF993QUE, ENCFF083IRL, ENCFF279EVY chr7 104125637 104125643 - Predicted LINE|L1|L1MdTf_III ENSMUSG00000030921.18, ENSMUSG00000057596.14, Trim30a, Trim30d DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091699, SRR10697197, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198219, SRR15198220, SRR15198226, SRR15198228, SRR2927113, SRR9178976, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178986, SRR9178990, SRR9178991 chr7 105231033 105231034 - Predicted SINE|MIR|MIRb ENSMUSG00000037032.17, Apbb1 ENCFF002EZU, ENCFF013CHH, ENCFF065LOT, ENCFF148XRK, ENCFF199IRM, ENCFF222GPK, ENCFF271OHB, ENCFF308FEA, ENCFF348FTH, ENCFF355AMN, ENCFF377UGQ, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF510TTU, ENCFF572TOH, ENCFF595WXV, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF725ATS, ENCFF744OEI, ENCFF747XPP, ENCFF831ISX, ENCFF860XMD, ENCFF886BRO, ENCFF962OCF, ENCFF967NOO, ENCFF008XVO, ENCFF075EMK, ENCFF119IHT, ENCFF269AST, ENCFF499CDP, ENCFF510AYI, ENCFF803OIY, ENCFF847LGC, ENCFF911OIZ chr7 105774373 105774374 - Predicted LINE|L1|L1MdA_V ENSMUSG00000045868.13, Gvin1 ENCFF002FAC, ENCFF143PHU, ENCFF437AJW, ENCFF450WAV, ENCFF570KYE, ENCFF885AJK, ENCFF689ZLL, ENCFF344OJQ chr7 109039254 109039255 + Predicted LINE|RTE-X|L4_B_Mam ENSMUSG00000085407.3, 1700095J03Rik ENCFF002EZU, DRR091689, DRR091694, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR15198217, SRR15198218, SRR15198220, SRR15198223, SRR15198227, SRR15198228, SRR2927113, SRR9080663, SRR9080665 chr7 109093201 109093272 - Predicted DNA|DNA|MER126 ENSMUSG00000031026.16, Trim66 ENCFF002EZY, ENCFF002FAG, ENCFF247QZW, ENCFF374YTS, ENCFF377UGQ, ENCFF487DYP, ENCFF587VDB, ENCFF744OEI, ENCFF399XUL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR11428467, SRR11428468, SRR11428470, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR2040601, SRR2927111, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 109725015 109725016 + Predicted LINE|CR1|L3 ENSMUSG00000031016.10, Wee1 ENCFF002DMZ, ENCFF002DNB, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF885AJK, SRR3178203, SRR3178206 chr7 110107979 110107980 + Predicted LINE|L1|L1MdF_III ENSMUSG00000090855.2, Gm17219 DRR091688, DRR091691, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR2927113, SRR9178976, SRR9178977, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178989, SRR9178991 chr7 110678570 110678603 - Annotated LINE|RTE-BovB|MamRTE1 ENSMUSG00000005610.18, Eif4g2 ENSMUST00000161682.2 ENCFF002DMZ, ENCFF051JGE, ENCFF143PHU, ENCFF198RBJ, ENCFF221NAP, ENCFF452AXW, ENCFF570KYE, ENCFF836JVX, ENCFF885AJK, ENCFF888LGA, ENCFF197OUM, ENCFF302KQL, ENCFF334XFS, ENCFF538AIM, ENCFF565YJQ, ENCFF689ZLL, ENCFF894SHM, ENCFF962ZCT, SRR3178203, SRR3178204, SRR6904683, SRR6904684, SRR6904685 chr7 112458860 112458865 + Predicted SINE|B2|B3 ENSMUSG00000055320.19, Tead1 SRR2089610, SRR2089611, SRR2089614, SRR2089615, SRR2089617, SRR2089618, SRR2089619, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650 chr7 113164260 113164261 - Predicted LINE|L1|L1MEg ENSMUSG00000084984.9, Far1os ENCFF452AXW, DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR15198217, SRR15198219, SRR15198221, SRR15198222, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643199, SRR6904684, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 113365411 113365492 + Annotated LINE|L2|AmnL2-1 ENSMUSG00000038156.17, Spon1 ENSMUST00000084696.6 ENCFF002EZW, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAI, ENCFF005GQR, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF101BDM, ENCFF134HVE, ENCFF156YWS, ENCFF170XMM, ENCFF199ZDO, ENCFF222GPK, ENCFF233IFH, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF271OHB, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF348FTH, ENCFF355AMN, ENCFF364LFJ, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF390NKP, ENCFF444YCN, ENCFF454ZUS, ENCFF478KOR, ENCFF484HRX, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF521NCL, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF588DUN, ENCFF592GVA, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF694NRG, ENCFF697AST, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF754TOT, ENCFF766LGO, ENCFF775SSI, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF829RHM, ENCFF855FCX, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF923VUD, ENCFF924LPZ, ENCFF939IUH, ENCFF962OCF, ENCFF967NOO, ENCFF075EMK, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF342GAL, ENCFF344OJQ, ENCFF481CFU, ENCFF499CDP, ENCFF517DCU, ENCFF525QIM, ENCFF569XGG, ENCFF641WPY, ENCFF670VVN, ENCFF723MAR, ENCFF749STK, ENCFF803OIY, ENCFF911OIZ, ENCFF970VKL, SRR13142118, SRR13142119, SRR13142120, SRR2927111, SRR2927113 chr7 113780629 113780630 + Annotated SINE|MIR|MIRb ENSMUSG00000120689.1, ENSMUSG00000120689 ENSMUST00000245183.1 chr7 114619541 114619562 + Annotated LTR|ERVL|MER21B ENSMUSG00000108722.3, Gm34225 ENSMUST00000246001.1, ENSMUST00000205469.3, ENSMUST00000240848.1, ENSMUST00000245878.1 ENCFF062GNP, ENCFF186VNL, ENCFF349AIG, ENCFF574YMK chr7 115788838 115788839 - Annotated SINE|Alu|B1F2 ENSMUSG00000045659.19, Plekha7 ENSMUST00000182511.8, NM_001305190.1 ENCFF274ESJ, ENCFF403CRC chr7 117874585 117874586 - Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000108980.2, Gm45155 ENSMUST00000207365.2 chr7 118339659 118339706 + Predicted LTR|ERVL-MaLR|ORR1B1-int ENSMUSG00000030982.20, Vps35l ENCFF002DND, ENCFF002FAG, ENCFF808XFI, ENCFF251WZA, ENCFF572TOH, ENCFF647TTU, ENCFF670FEL, ENCFF924LPZ, ENCFF068CQU, ENCFF268ZHE, ENCFF595NMM, ENCFF663SPA, ENCFF510AYI, ENCFF803OIY, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 118363347 118363348 + Annotated LTR|ERVK|RMER19B ENSMUSG00000030982.20, Vps35l ENSMUST00000033280.14 chr7 119219519 119219598 - Annotated SINE|MIR|MIRb ENSMUSG00000109093.2, Gm39079 ENSMUST00000207110.2, ENSMUST00000207060.2, NR_166607.1 chr7 119241630 119241631 - Annotated LTR|ERVK|RLTR19-int ENSMUSG00000109093.2, Gm39079 ENSMUST00000207364.2 chr7 119329969 119330015 + Predicted LTR|ERV1|MURVY-LTR ENSMUSG00000100153.3, Ppp1ccb ENCFF005GQR, ENCFF013CHH, ENCFF156YWS, ENCFF296VFB, ENCFF308FEA, ENCFF355AMN, ENCFF377UGQ, ENCFF632LPV, ENCFF733MXU, ENCFF818BAS, ENCFF967NOO, ENCFF670VVN, ENCFF803OIY, DRR091694, DRR091695, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601 chr7 119700835 119700840 + Predicted DNA|hAT-Charlie|MER20 ENSMUSG00000030917.14, Tmem159 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9080662 chr7 119846063 119846064 + Predicted LINE|CR1|L3 ENSMUSG00000062017.16, Abca14 SRR3178203, SRR3178205, SRR3178206, SRR5643199 chr7 120480137 120480138 - Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000121009.1, ENSMUSG00000121009 ENSMUST00000246848.1 ENCFF181RDS, ENCFF793IYH chr7 121189041 121189063 - Annotated SINE|MIR|MIR3 ENSMUSG00000108811.2, 4933432K03Rik ENSMUST00000205739.2, ENSMUST00000206276.2, NR_102286.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178206, SRR5643190, SRR5643192, SRR5643201, SRR6338004, SRR6904683, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 122571978 122571991 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000030779.17, Rbbp6 ENCFF075MGH, ENCFF120DEX, ENCFF421ACV, ENCFF443PSO, ENCFF667FDW, ENCFF671ERF, ENCFF789LUC, ENCFF009AVK, ENCFF037LEJ, ENCFF087XKQ, ENCFF088PZI, ENCFF106RLX, ENCFF137OYQ, ENCFF169JOQ, ENCFF198XFF, ENCFF254TFB, ENCFF382VCK, ENCFF417INY, ENCFF512LAN, ENCFF543GNI, ENCFF549IDH, ENCFF578YPJ, ENCFF585CYT, ENCFF620FXM, ENCFF661TOM, ENCFF673ZDG, ENCFF696QTS, ENCFF740WXS, ENCFF903KDM, ENCFF930JCE, ENCFF974KKD, ENCFF994JUO, ENCFF996WVL, SRR13142121 chr7 122593894 122593895 + Predicted DNA|TcMar-Tigger|Tigger15a ENSMUSG00000030779.17, Rbbp6 ENCFF002EZY, ENCFF002FAA, ENCFF002FAI, ENCFF198RBJ, ENCFF009AVK, ENCFF054EOL, ENCFF404HLB, SRR3178204, SRR3178206 chr7 122828107 122828108 + Annotated LTR|ERVL|MT2B ENSMUSG00000030769.16, Slc5a11 ENSMUST00000131461.3, ENSMUST00000127655.8 chr7 123785919 123785958 + Annotated SINE|MIR|MIR ENSMUSG00000085899.2, 4930551E15Rik ENSMUST00000151884.2 DRR091688, DRR091689, DRR091691, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR10697201, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6904683, SRR6904684, SRR9080663, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr7 12515687 12515688 - Predicted LINE|L1|L1MD2 ENSMUSG00000070822.6, Zscan18 DRR091689, DRR091691, DRR091697, SRR10697196, SRR10697197, SRR11428470, SRR15198217, SRR15198219, SRR15198221, SRR15198222, SRR2040601, SRR2927111, SRR9178977, SRR9178978, SRR9178983, SRR9178987, SRR9178989, SRR9178991, SRR9178992 chr7 125829347 125829348 - Predicted Retroposon|L1-dep|RMER1C ENSMUSG00000108676.2, 1700123J17Rik SRR11428469, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226 chr7 126166714 126166715 - Predicted SINE|B4|ID_B1 ENSMUSG00000030738.12, Eif3c ENCFF133PEB, ENCFF295SYY, ENCFF595GFM, ENCFF670YKO, ENCFF896MQK, ENCFF952BCB, ENCFF014CMK, ENCFF067OYG, ENCFF949QCF chr7 126167868 126167869 - Predicted LINE|L1|Lx5c ENSMUSG00000030738.12, Eif3c ENCFF521UGJ, ENCFF795DLS, ENCFF858CRT, ENCFF175LCC chr7 126183612 126183642 - Predicted LINE|L2|L2b ENSMUSG00000030720.17, Cln3 ENCFF022FSI, ENCFF043JGD, ENCFF074HUJ, ENCFF094CCP, ENCFF108UNS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF205GJI, ENCFF206EGD, ENCFF214IUN, ENCFF221JIC, ENCFF225MMR, ENCFF305IXM, ENCFF310HPH, ENCFF345OIF, ENCFF349LIW, ENCFF371VGE, ENCFF393UZV, ENCFF450WAV, ENCFF470MXU, ENCFF489VZI, ENCFF521UGJ, ENCFF564OKH, ENCFF585YYC, ENCFF589REP, ENCFF645QUX, ENCFF670CXH, ENCFF672HUA, ENCFF711WAC, ENCFF727WWV, ENCFF764ZUI, ENCFF802GAN, ENCFF813GGJ, ENCFF828WIK, ENCFF841OXD, ENCFF844QDN, ENCFF851ESH, ENCFF868XLZ, ENCFF884DLS, ENCFF910ESY, ENCFF912RLS, ENCFF960LQP, ENCFF989HJD, ENCFF195JLT, ENCFF234LUQ, ENCFF935LAF, ENCFF027QGO, ENCFF028XDY, ENCFF035BBA, ENCFF037IZV, ENCFF046HWP, ENCFF056UGH, ENCFF060FGD, ENCFF087IUJ, ENCFF118PQI, ENCFF169JOQ, ENCFF242MZE, ENCFF249LSC, ENCFF255XDN, ENCFF257EYD, ENCFF260BJB, ENCFF260UQJ, ENCFF267KZS, ENCFF302MXO, ENCFF306FQJ, ENCFF310WDZ, ENCFF315OFF, ENCFF338LFG, ENCFF343MZH, ENCFF346UBA, ENCFF358UHV, ENCFF374VAZ, ENCFF404HLB, ENCFF420REU, ENCFF426FAF, ENCFF438ROC, ENCFF464KYQ, ENCFF497KLL, ENCFF505YPK, ENCFF512LAN, ENCFF522KWW, ENCFF524PAV, ENCFF529LEZ, ENCFF541HSQ, ENCFF563FUC, ENCFF611OFH, ENCFF613YNK, ENCFF644EGG, ENCFF658NHH, ENCFF661UPO, ENCFF673ZDG, ENCFF681EEO, ENCFF685FUZ, ENCFF694EPZ, ENCFF741PLM, ENCFF750IZJ, ENCFF812QQI, ENCFF818ZJQ, ENCFF855UFX, ENCFF867FTP, ENCFF869DVY, ENCFF875BUD, ENCFF886UAF, ENCFF926FRX, ENCFF936DQW, ENCFF938CNS, ENCFF944RHJ, ENCFF956ZKG, ENCFF962ZCT, ENCFF970LRH, ENCFF976SMI, ENCFF994PPZ, ENCFF999ZYF, ENCFF399XUL, ENCFF904RJF chr7 126496515 126496674 - Annotated SINE|MIR|MIRb ENSMUSG00000060538.15, Tmem219 ENSMUST00000120007.8 ENCFF002DND, ENCFF048IBL, ENCFF059IQN, ENCFF084PUC, ENCFF091WMS, ENCFF115KZV, ENCFF119KNP, ENCFF125HRQ, ENCFF126HTW, ENCFF139MHN, ENCFF160HKC, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF189WYV, ENCFF198NQV, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF262URV, ENCFF264DCN, ENCFF277XPM, ENCFF287KDR, ENCFF295SYY, ENCFF297CWJ, ENCFF326TQL, ENCFF344LNZ, ENCFF345OIF, ENCFF363CYZ, ENCFF381JXP, ENCFF390QUP, ENCFF393YET, ENCFF404PYQ, ENCFF420RFN, ENCFF439OFV, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF504ULZ, ENCFF527VIY, ENCFF534DID, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF625JLB, ENCFF639RWJ, ENCFF654BXL, ENCFF670CXH, ENCFF711WAC, ENCFF755FCM, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF802GAN, ENCFF865WQE, ENCFF876MJS, ENCFF880FYC, ENCFF912RLS, ENCFF915FID, ENCFF989HJD, ENCFF017LOD, ENCFF170XMM, ENCFF234LUQ, ENCFF269SRJ, ENCFF345BBC, ENCFF359GCY, ENCFF390NKP, ENCFF467LJD, ENCFF487DYP, ENCFF804UQS, ENCFF939IUH, ENCFF962FIU, ENCFF975NCY, ENCFF002SZY, ENCFF033DWC, ENCFF046HWP, ENCFF054EOL, ENCFF057FFG, ENCFF061WTN, ENCFF067OYG, ENCFF070YMI, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF095NMU, ENCFF126WDH, ENCFF133KGZ, ENCFF142PTA, ENCFF166UTY, ENCFF167GWU, ENCFF170KWW, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF199AAD, ENCFF235HER, ENCFF237HDL, ENCFF257EYD, ENCFF258WLS, ENCFF268ZHE, ENCFF280LCC, ENCFF291SCS, ENCFF299ENO, ENCFF334XFS, ENCFF338LFG, ENCFF344VGL, ENCFF346HDC, ENCFF352KGC, ENCFF359DNK, ENCFF386XTQ, ENCFF390AUP, ENCFF394AUR, ENCFF403CRC, ENCFF406LFV, ENCFF408FFP, ENCFF424GQM, ENCFF426FAF, ENCFF429TQT, ENCFF453MPR, ENCFF478BEL, ENCFF490ULA, ENCFF498OHV, ENCFF505PJK, ENCFF518TUP, ENCFF538TFM, ENCFF552KEA, ENCFF557JPW, ENCFF576EOD, ENCFF584ZUK, ENCFF594GIP, ENCFF596INO, ENCFF609WRW, ENCFF615ULR, ENCFF618SIR, ENCFF619SKV, ENCFF640RWH, ENCFF680OWA, ENCFF680WIN, ENCFF683WFA, ENCFF685FUZ, ENCFF707HQI, ENCFF712BKP, ENCFF716NXU, ENCFF727JTZ, ENCFF737VKP, ENCFF765UBL, ENCFF811ZQO, ENCFF814TTQ, ENCFF820JMO, ENCFF849PKR, ENCFF860SGX, ENCFF863ENS, ENCFF864DTX, ENCFF869DVY, ENCFF869MFM, ENCFF938XTE, ENCFF939QLN, ENCFF953POL, ENCFF956ZKG, ENCFF970WCD, ENCFF260KJY, ENCFF574YMK, ENCFF720MPJ, ENCFF854IBU chr7 126546734 126546735 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000030683.12, Sez6l2 ENCFF421SNO, ENCFF374YTS, ENCFF454ZUS, ENCFF465BBM, ENCFF399XUL, ENCFF525QIM, SRR9178986 chr7 126614103 126614106 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000030681.19, Mvp ENCFF138QRF, ENCFF221JIC, ENCFF313ERY, ENCFF376MQF, ENCFF521UGJ, ENCFF581WWO, ENCFF643VPC, ENCFF670YKO, ENCFF813ZJI, ENCFF828WIK, ENCFF881TID, ENCFF942WIP, ENCFF951MOU, ENCFF013HYW, ENCFF023MKT, ENCFF033ZUH, ENCFF052WUB, ENCFF199ZDO, ENCFF234LUQ, ENCFF304DLW, ENCFF429BQZ, ENCFF444YCN, ENCFF455DHP, ENCFF510LAE, ENCFF532UKS, ENCFF803VZZ, ENCFF804UQS, ENCFF838YLT, ENCFF868WEJ, ENCFF124SSE, ENCFF141YUD, ENCFF166UTY, ENCFF210BVU, ENCFF257EYD, ENCFF343MIX, ENCFF346NGU, ENCFF357QTB, ENCFF404HLB, ENCFF437QAE, ENCFF437ZSM, ENCFF464KYQ, ENCFF518TUP, ENCFF572SQL, ENCFF612KDP, ENCFF696VQM, ENCFF741PLM, ENCFF903KDM, ENCFF910CTW, ENCFF936DQW, ENCFF949QCF, ENCFF985NHB, ENCFF014SLC, ENCFF160TQC, ENCFF302TQH, ENCFF306ADU, ENCFF517DCU, ENCFF592WZB, ENCFF720MPJ, SRR15198221, SRR15198222 chr7 126811851 126811852 + Annotated SINE|B4|ID_B1 ENSMUSG00000030672.13, Mylpf ENSMUST00000127710.3 ENCFF001NDD, ENCFF089PFT, ENCFF102BWR, ENCFF696TCH chr7 126886901 126886902 + Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000108760.2, Gm31897 ENSMUST00000205924.2 chr7 127051759 127051760 + Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000086502.3, B130055M24Rik DRR091695, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR6338004, SRR9178979, SRR9178982, SRR9178985 chr7 127118328 127118329 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000053877.13, Srcap ENCFF160HKC, ENCFF376MQF, ENCFF403ORF, ENCFF453XOG, ENCFF667FDW, ENCFF723QIC, ENCFF764ZUI, ENCFF784LWT, ENCFF789LUC, ENCFF795DLS, ENCFF812CUD, ENCFF876MJS, ENCFF883UYA, ENCFF906FNQ, ENCFF979WZO, ENCFF003GJV, ENCFF108JLQ, ENCFF133PKQ, ENCFF136TYP, ENCFF163BDT, ENCFF305GPD, ENCFF346NGU, ENCFF386HCR, ENCFF386XTQ, ENCFF519AKK, ENCFF533ZIO, ENCFF565CON, ENCFF584ZUK, ENCFF644EGG, ENCFF695XIY, ENCFF698XCB, ENCFF699SBZ, ENCFF772QLP, ENCFF782CNW, ENCFF790WIY, ENCFF803ZUN, ENCFF840EFC, ENCFF881DTW, ENCFF881YOK, ENCFF953FGT, SRR13142119 chr7 127118428 127118429 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000053877.13, Srcap ENCFF160HKC, ENCFF403ORF, ENCFF723QIC, ENCFF784LWT, ENCFF789LUC, ENCFF795DLS, ENCFF883UYA, ENCFF906FNQ, ENCFF979WZO, ENCFF108JLQ, ENCFF133PKQ, ENCFF163BDT, ENCFF229CPV, ENCFF346NGU, ENCFF386HCR, ENCFF386XTQ, ENCFF519AKK, ENCFF533ZIO, ENCFF584ZUK, ENCFF644EGG, ENCFF695XIY, ENCFF698XCB, ENCFF699SBZ, ENCFF772QLP, ENCFF790WIY, ENCFF803ZUN, ENCFF817NCH, ENCFF840EFC, ENCFF881DTW, ENCFF881YOK, ENCFF953FGT, SRR13142119 chr7 127296203 127296204 + Annotated LTR|ERVK|MYSERV-int ENSMUSG00000108801.3, Gm39090 ENSMUST00000205284.2 ENCFF284AEN, ENCFF364LFJ, ENCFF683CWD, ENCFF728TXU, ENCFF766LGO, ENCFF943XKB, ENCFF716YKR, DRR091698, SRR15198218, SRR15198221 chr7 12733041 12733042 + Annotated LTR|ERVK|MRLTR33 ENSMUSG00000005566.15, Trim28 ENSMUST00000209577.2 ENCFF001RTN chr7 127475891 127475892 + Predicted SINE|Alu|PB1D7 ENSMUSG00000049739.11, Zfp646 ENCFF001NCR, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF002ERU, ENCFF002ERW, ENCFF002EZW, ENCFF048IBL, ENCFF059IQN, ENCFF082HKQ, ENCFF120DEX, ENCFF159OVE, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF206EGD, ENCFF269UZL, ENCFF426QFT, ENCFF450WAV, ENCFF521UGJ, ENCFF593RAV, ENCFF808XFI, ENCFF828WIK, ENCFF884TJE, ENCFF270ERO, ENCFF467LJD, ENCFF725ATS, ENCFF002SZY, ENCFF046HWP, ENCFF049SEE, ENCFF128CYW, ENCFF249LSC, ENCFF254VIN, ENCFF258WLS, ENCFF306FQJ, ENCFF338LFG, ENCFF380LXU, ENCFF422CQE, ENCFF482VRF, ENCFF576EOD, ENCFF581RIR, ENCFF598WAL, ENCFF615ULR, ENCFF673GRZ, ENCFF685GDB, ENCFF742DJH, ENCFF753HNF, ENCFF758IOS, ENCFF806XNV, ENCFF877VSZ, ENCFF974XWJ, ENCFF983GRF chr7 128101556 128101557 - Annotated SINE|Alu|B1_Mur1 ENSMUSG00000108626.3, Gm40457 ENSMUST00000242865.1 ENCFF236TUH, ENCFF657UWH, ENCFF686KMX, ENCFF785TEQ, ENCFF868WEJ, ENCFF160TQC chr7 128345935 128345954 + Predicted LTR|ERV1|MER67B ENSMUSG00000055319.9, Sec23ip ENCFF125HRQ, ENCFF140VGY, ENCFF178PMH, ENCFF305IXM, ENCFF400XLQ, ENCFF450WAV, ENCFF470MXU, ENCFF495YGN, ENCFF670YKO, ENCFF672HUA, ENCFF683RFI, ENCFF934ZAP, ENCFF951MOU, ENCFF034WGV, ENCFF068CQU, ENCFF082OML, ENCFF149DFF, ENCFF178ZXW, ENCFF205CDI, ENCFF275TCB, ENCFF296UDD, ENCFF332IRR, ENCFF408FFP, ENCFF417INY, ENCFF469JWF, ENCFF541HSQ, ENCFF565CON, ENCFF596INO, ENCFF615ULR, ENCFF806XNV, ENCFF970WCD, ENCFF997QQG chr7 128346079 128346080 + Predicted LTR|ERV1|MER67B ENSMUSG00000055319.9, Sec23ip ENCFF432ZLQ, ENCFF514BEA, ENCFF015JJB, ENCFF094RHV, ENCFF178ZXW, ENCFF332IRR, ENCFF377OQI, ENCFF469JWF, ENCFF541HSQ, ENCFF997QQG chr7 129858941 129858942 - Predicted SINE|B2|B3A ENSMUSG00000030849.19, Fgfr2 SRR2089637, SRR2089638, SRR2089648, SRR2089649, SRR2089651 chr7 130126458 130126465 + Predicted LINE|L1|L1MCa ENSMUSG00000099422.5, Gm4275 DRR091697, DRR091698, DRR091699, SRR10697198, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR3178203, SRR9080663, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178985, SRR9178986, SRR9178990, SRR9178992 chr7 130185329 130185330 - Predicted LTR|ERVK|RMER13A2 ENSMUSG00000030849.19, Fgfr2 SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr7 130210936 130210937 - Predicted LINE|L1|L1MC2 ENSMUSG00000030849.19, Fgfr2 DRR091689, DRR091695, SRR13142120, SRR15198225, SRR15198227, SRR2040601, SRR2927113, SRR9178976, SRR9178979 chr7 13058580 13058581 + Annotated LTR|ERVL|MER54B ENSMUSG00000033847.16, Pla2g4c ENSMUST00000167232.8 chr7 130751258 130751259 + Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000100759.7, 1700029B22Rik SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6904683, SRR6904684 chr7 132460532 132460533 + Predicted LINE|L2|L2 ENSMUSG00000030965.20, Abraxas2 ENCFF051JSS, ENCFF114PSQ, ENCFF205GJI, ENCFF206EGD, ENCFF274WSX, ENCFF514JOV, ENCFF548SLN, ENCFF623BKO, ENCFF865WQE, ENCFF878SQO, ENCFF937GBW, ENCFF195JLT, ENCFF004AEL, ENCFF014CMK, ENCFF049SEE, ENCFF177SGB, ENCFF203EWG, ENCFF237JCE, ENCFF258WLS, ENCFF303BIV, ENCFF313IFI, ENCFF430ERW, ENCFF459TYQ, ENCFF492HRC, ENCFF497GLK, ENCFF576EOD, ENCFF673GRZ, ENCFF769FVU, ENCFF811ZQO, ENCFF910CTW, ENCFF938XTE, ENCFF956ZKG, ENCFF958BIE chr7 136312332 136312333 - Annotated LTR|LTR|LTR90A ENSMUSG00000110101.2, Gm6249 ENSMUST00000211142.2, NR_046021.1 chr7 138800582 138800583 + Predicted SINE|B2|B3 ENSMUSG00000015980.15, Lrrc27 ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF104LLO, ENCFF114PSQ, ENCFF140VGY, ENCFF142CUS, ENCFF178PMH, ENCFF178ZVU, ENCFF184EAT, ENCFF189WYV, ENCFF214IUN, ENCFF225MMR, ENCFF262URV, ENCFF274WSX, ENCFF296ASE, ENCFF297CWJ, ENCFF305IXM, ENCFF330LWU, ENCFF331WKS, ENCFF351JWR, ENCFF375EMG, ENCFF392TDB, ENCFF421SNO, ENCFF445BBH, ENCFF462ABU, ENCFF470MXU, ENCFF482MUH, ENCFF495YGN, ENCFF504ULZ, ENCFF514JOV, ENCFF527VIY, ENCFF533JUU, ENCFF564OKH, ENCFF593RAV, ENCFF595GFM, ENCFF625JLB, ENCFF670CXH, ENCFF683RFI, ENCFF711WAC, ENCFF761RKP, ENCFF775RSS, ENCFF796NHQ, ENCFF813GGJ, ENCFF841OXD, ENCFF851ESH, ENCFF878SQO, ENCFF912RLS, ENCFF915FID, ENCFF934ZAP, ENCFF937GBW, ENCFF991TPB, ENCFF996STG, ENCFF002SZY, ENCFF009AON, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF037IZV, ENCFF041PJP, ENCFF053NFR, ENCFF057FFG, ENCFF065ZIE, ENCFF070YMI, ENCFF080REY, ENCFF082BJV, ENCFF088SVK, ENCFF094RHV, ENCFF116QKZ, ENCFF118YHP, ENCFF131VEF, ENCFF150HVU, ENCFF158HQO, ENCFF163DKN, ENCFF172DMS, ENCFF187BHR, ENCFF189BIW, ENCFF197TJB, ENCFF205CDI, ENCFF243TPB, ENCFF278JAU, ENCFF279EVY, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF313IFI, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF332IRR, ENCFF343MIX, ENCFF357QTB, ENCFF369VAI, ENCFF380BYT, ENCFF380LXU, ENCFF390ZZH, ENCFF406NLL, ENCFF411KCB, ENCFF426ETE, ENCFF476JSK, ENCFF478BEL, ENCFF482VRF, ENCFF490ULA, ENCFF505WKA, ENCFF512XKX, ENCFF536ZVF, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF561CZI, ENCFF566HCI, ENCFF576EOD, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF594GIP, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WRW, ENCFF614WCH, ENCFF619SKV, ENCFF637PIP, ENCFF656DRS, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF766UJI, ENCFF769FVU, ENCFF780UQU, ENCFF801SNQ, ENCFF819JGD, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF863LMG, ENCFF867FTP, ENCFF871CMC, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF958BIE, ENCFF959CWA, ENCFF966VVA, ENCFF970LRH, ENCFF999ZYF chr7 140485908 140486024 + Annotated LTR|ERVL|MLT2D ENSMUSG00000109628.3, BC024386 ENSMUST00000210567.3, ENSMUST00000245836.1, ENSMUST00000246655.1, ENSMUST00000209406.3, ENSMUST00000246315.1, ENSMUST00000246717.1, ENSMUST00000210080.3, ENSMUST00000243137.1, ENSMUST00000241285.1, ENSMUST00000246042.1, ENSMUST00000246128.1, ENSMUST00000247132.1, ENSMUST00000247327.1, ENSMUST00000247390.1, ENSMUST00000247475.1, ENSMUST00000242243.1, ENSMUST00000247221.1, ENSMUST00000241497.1, ENSMUST00000247467.1, ENSMUST00000247547.1, ENSMUST00000246586.1, ENSMUST00000246276.1, ENSMUST00000247250.1, ENSMUST00000209817.3, ENSMUST00000243031.1, ENSMUST00000246467.1, ENSMUST00000247368.1, ENSMUST00000209842.3, ENSMUST00000243858.1, ENSMUST00000247155.1, ENSMUST00000247294.1, ENSMUST00000247463.1, ENSMUST00000246376.1, ENSMUST00000247279.1, ENSMUST00000247224.1, ENSMUST00000246755.1, ENSMUST00000247480.1, ENSMUST00000247254.1, ENSMUST00000247469.1, ENSMUST00000209496.2, ENSMUST00000247227.1, ENSMUST00000247133.1, NR_015583.2 ENCFF001RTD, ENCFF001RTN, ENCFF330FNX, ENCFF446FOZ, ENCFF608LAL, ENCFF683CWD, ENCFF737OUQ, ENCFF838YLT, ENCFF197NCG chr7 140702687 140702688 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000025495.16, Ptdss2 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr7 140739946 140739947 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000038650.16, Rnh1 SRR2089616, SRR2089619, SRR2089621, SRR2089623, SRR2089629, SRR2089630, SRR2089636, SRR2089640, SRR2089647 chr7 140751656 140751755 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000038650.16, Rnh1 ENCFF001NDA, ENCFF002FAE, ENCFF005NBP, ENCFF092YWY, ENCFF117BGT, ENCFF120DEX, ENCFF138TOM, ENCFF196PBF, ENCFF273TLO, ENCFF277XPM, ENCFF289WHW, ENCFF313ERY, ENCFF319INV, ENCFF352VWM, ENCFF421ACV, ENCFF439OFV, ENCFF443PSO, ENCFF486NGU, ENCFF533NLR, ENCFF554PUC, ENCFF560YXX, ENCFF581WWO, ENCFF667FDW, ENCFF723KAG, ENCFF745HSV, ENCFF764EJV, ENCFF764TGO, ENCFF783MLO, ENCFF858CTQ, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF907HVO, ENCFF913CFN, ENCFF946AGD, ENCFF972IVS, ENCFF985BLV, ENCFF345BBC, ENCFF581KUX, ENCFF712DGP, ENCFF970VKB, ENCFF012HVN, ENCFF024CUG, ENCFF043DTH, ENCFF049WBL, ENCFF077YZF, ENCFF087OKI, ENCFF088PZI, ENCFF106RLX, ENCFF108JLQ, ENCFF116DGU, ENCFF117ZMM, ENCFF118YHP, ENCFF121IDD, ENCFF134PXJ, ENCFF134VWD, ENCFF166UTY, ENCFF175LCC, ENCFF194DAO, ENCFF208BJY, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF222MKT, ENCFF228CMT, ENCFF254TFB, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF275TCB, ENCFF303BIV, ENCFF307OHZ, ENCFF315HBU, ENCFF331YYO, ENCFF332RWQ, ENCFF371ZDG, ENCFF376PQU, ENCFF377OQI, ENCFF397ZQU, ENCFF403RPK, ENCFF406NLL, ENCFF414IHO, ENCFF417INY, ENCFF420RGI, ENCFF422ZNC, ENCFF426ZCK, ENCFF427YDU, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF484PQK, ENCFF485GFE, ENCFF497KLL, ENCFF498OHV, ENCFF505YPK, ENCFF507WIK, ENCFF512LAN, ENCFF558UDY, ENCFF573WSG, ENCFF578YPJ, ENCFF591WVP, ENCFF596PMK, ENCFF598BFX, ENCFF601JTS, ENCFF618PVF, ENCFF641CYW, ENCFF655CUI, ENCFF685FUZ, ENCFF685GDB, ENCFF696VQM, ENCFF696XZL, ENCFF698WQO, ENCFF698XCB, ENCFF700IPC, ENCFF711XWR, ENCFF740WXS, ENCFF742DJH, ENCFF753HNF, ENCFF758JNE, ENCFF765AQX, ENCFF782CNW, ENCFF804EWD, ENCFF812QQI, ENCFF847IGW, ENCFF849PKR, ENCFF851JLX, ENCFF853PNO, ENCFF866IHG, ENCFF881DTW, ENCFF894COY, ENCFF896XAZ, ENCFF908MGO, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF936DQW, ENCFF936LNA, ENCFF939QLN, ENCFF949QCF, ENCFF950FFF, ENCFF953FGT, ENCFF955WXI, ENCFF958LRX, ENCFF986DZE, ENCFF062GNP, ENCFF178HDG, DRR091697, SRR10697203, SRR15198219, SRR15198228, SRR2927111, SRR2927112 chr7 140753398 140753399 - Predicted LTR|ERVL-MaLR|ORR1D1 ENSMUSG00000038650.16, Rnh1 ENCFF056GXQ, ENCFF064PBF, ENCFF367BBB, ENCFF013CHH, ENCFF308FEA, ENCFF408NBX, ENCFF465BBM, ENCFF532UKS, ENCFF636NES, ENCFF068CQU, ENCFF177LXI, ENCFF644EGG, ENCFF499GDC, ENCFF574YMK, ENCFF582WGH, ENCFF720MPJ, ENCFF854IBU, ENCFF932SOZ, SRR13142119, SRR13142120, SRR15198228 chr7 14172475 14172486 - Annotated SINE|B4|ID_B1 ENSMUSG00000030378.16, Sult2a8 ENSMUST00000168252.9, ENSMUST00000210366.2, NM_001199306.1 ENCFF001RTD, ENCFF001RTN, ENCFF223BXU, ENCFF446FOZ, ENCFF608LAL, ENCFF683CWD, ENCFF737OUQ, ENCFF838YLT, ENCFF197NCG, ENCFF306ADU, ENCFF454JTI, ENCFF827NYZ chr7 141836947 141836948 + Annotated LTR|ERVK|ERVB4_1C-LTR_Mm ENSMUSG00000109936.2, Gm45889 ENSMUST00000209535.2 SRR10697197, SRR15198217, SRR15198220, SRR15198223, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004 chr7 141837197 141837198 + Annotated LTR|ERVK|ERVB4_1-I_MM ENSMUSG00000109936.2, Gm45889 ENSMUST00000211255.2 chr7 142317807 142317808 - Predicted LTR|ERVK|RLTR50B ENSMUSG00000000215.12, Ins2 SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR6338004 chr7 143182018 143182019 + Annotated LINE|L1|L1MB3 ENSMUSG00000109251.2, E230032D23Rik ENSMUST00000207189.2 ENCFF002ERW, ENCFF116MYR, ENCFF996STG, ENCFF505WKA, ENCFF970LRH chr7 143562991 143562992 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000093221.3, Mir3105 ENSMUST00000175480.3, NR_037292.1 chr7 16020669 16020924 - Annotated LTR|ERV1|MMVL30-int ENSMUSG00000041375.20, Ccdc9 ENSMUST00000118976.10, ENSMUST00000148741.10, ENSMUST00000150528.9, ENSMUST00000144186.8, ENSMUST00000146609.3, NM_001382412.1, NM_001382411.1, NM_001136471.1, NM_001382416.1, NM_001382415.1, NM_001382414.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDZ, ENCFF001RTD, ENCFF001RTF, ENCFF001RTN, ENCFF002DNB, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF007RPT, ENCFF022FSI, ENCFF023RRS, ENCFF027BYX, ENCFF027IIP, ENCFF048IBL, ENCFF051JSS, ENCFF059IQN, ENCFF074HTO, ENCFF074HUJ, ENCFF076CCZ, ENCFF082HKQ, ENCFF084PUC, ENCFF086ZMV, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102BWR, ENCFF104LLO, ENCFF105KSL, ENCFF114PSQ, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126RJS, ENCFF130KZZ, ENCFF133PEB, ENCFF136POG, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF160HKC, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF186RYS, ENCFF189WYV, ENCFF196PBF, ENCFF198NQV, ENCFF206EGD, ENCFF207DLW, ENCFF214IUN, ENCFF218HNK, ENCFF221JNS, ENCFF229AIZ, ENCFF234MZC, ENCFF251TMY, ENCFF261OTH, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF264RIV, ENCFF265LKR, ENCFF273CJD, ENCFF273TLO, ENCFF274WSX, ENCFF287KDR, ENCFF289WHW, ENCFF291LRG, ENCFF295SYY, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF304MIZ, ENCFF305IXM, ENCFF308LTO, ENCFF313ERY, ENCFF319INV, ENCFF321BMO, ENCFF322VJD, ENCFF326TQL, ENCFF330IYN, ENCFF330LWU, ENCFF332ZPO, ENCFF344ILW, ENCFF344LNZ, ENCFF347UAC, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF358UFZ, ENCFF363CYZ, ENCFF363XWU, ENCFF366BBB, ENCFF371VGE, ENCFF379JPQ, ENCFF385GUJ, ENCFF385MVU, ENCFF390QUP, ENCFF392TDB, ENCFF393UZV, ENCFF401HCS, ENCFF403ORF, ENCFF404PYQ, ENCFF420RFN, ENCFF421ACV, ENCFF421SNO, ENCFF426QFT, ENCFF432ZLQ, ENCFF437AJW, ENCFF438JMT, ENCFF445BBH, ENCFF449MIK, ENCFF453XOG, ENCFF460NGS, ENCFF462ABU, ENCFF470MXU, ENCFF486NGU, ENCFF489VZI, ENCFF491XRO, ENCFF494YXM, ENCFF495SQR, ENCFF495YGN, ENCFF497YRP, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF519IZA, ENCFF521IDK, ENCFF521UGJ, ENCFF522VLI, ENCFF525POD, ENCFF527VIY, ENCFF533CLY, ENCFF533NLR, ENCFF535YBP, ENCFF540XSD, ENCFF548SLN, ENCFF552DRF, ENCFF552NWL, ENCFF564OKH, ENCFF565YHF, ENCFF585YYC, ENCFF589MBR, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF608NVM, ENCFF621PKT, ENCFF623BKO, ENCFF641QXI, ENCFF643VPC, ENCFF645QUX, ENCFF667FDW, ENCFF670CXH, ENCFF671ERF, ENCFF672HUA, ENCFF683RFI, ENCFF686EWL, ENCFF691URX, ENCFF696TCH, ENCFF698LQF, ENCFF705JRV, ENCFF707QJV, ENCFF725RXU, ENCFF727WWV, ENCFF743QXJ, ENCFF743RQJ, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF764EJV, ENCFF764ZUI, ENCFF771LLL, ENCFF775BPV, ENCFF780TUN, ENCFF787LWL, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF823PZU, ENCFF841OXD, ENCFF844KCR, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF858CTQ, ENCFF863RVB, ENCFF865WQE, ENCFF874ELO, ENCFF878SQO, ENCFF881UBL, ENCFF883UYA, ENCFF884DLS, ENCFF896IIZ, ENCFF896MQK, ENCFF902GVX, ENCFF906FNQ, ENCFF907HVO, ENCFF910ESY, ENCFF912RLS, ENCFF913CFN, ENCFF917RNE, ENCFF924VRI, ENCFF925ONP, ENCFF931HCN, ENCFF931PFF, ENCFF933UPG, ENCFF934ULS, ENCFF934ZAP, ENCFF935XRF, ENCFF942WIP, ENCFF946AGD, ENCFF951UXE, ENCFF960LQP, ENCFF970XZM, ENCFF979WZO, ENCFF982BLT, ENCFF985BLV, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF084CWD, ENCFF115LWP, ENCFF134HVE, ENCFF148XRK, ENCFF195JLT, ENCFF199IRM, ENCFF222GPK, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF269SRJ, ENCFF270ERO, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF330FNX, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF369YLA, ENCFF377UGQ, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF572TOH, ENCFF581KUX, ENCFF587VDB, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609ZVL, ENCFF632LPV, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF667SYQ, ENCFF670FEL, ENCFF694NRG, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF744OEI, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF803VZZ, ENCFF804UQS, ENCFF818BAS, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF840XYZ, ENCFF845NXM, ENCFF854MWX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF933KQV, ENCFF935LAF, ENCFF939IUH, ENCFF945ICZ, ENCFF962OCF, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF002ZAX, ENCFF003GJV, ENCFF004AEL, ENCFF006JHA, ENCFF008YSM, ENCFF009AON, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF013SNI, ENCFF015JJB, ENCFF019PVP, ENCFF019PWU, ENCFF022ACG, ENCFF023TPS, ENCFF027GBM, ENCFF027GCQ, ENCFF028XDY, ENCFF030IFE, ENCFF033DWC, ENCFF035BBA, ENCFF037IZV, ENCFF037LEJ, ENCFF039PJR, ENCFF041PJP, ENCFF043DTH, ENCFF045YRV, ENCFF046HWP, ENCFF050CMF, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF057MDU, ENCFF060FGD, ENCFF061WTN, ENCFF064VAD, ENCFF065UBR, ENCFF066MTU, ENCFF066UDR, ENCFF067OYG, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077CYB, ENCFF078CCF, ENCFF080BTV, ENCFF080DNG, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF087OKI, ENCFF088PZI, ENCFF088SVK, ENCFF089SWU, ENCFF090EUZ, ENCFF094RHV, ENCFF095NMU, ENCFF098AYQ, ENCFF098TCZ, ENCFF103SQR, ENCFF106GHS, ENCFF106RLX, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF116QKZ, ENCFF117ZMM, ENCFF118PQI, ENCFF120SMK, ENCFF121IDD, ENCFF126WDH, ENCFF127KHN, ENCFF131VEF, ENCFF133KGZ, ENCFF133PKQ, ENCFF134VWD, ENCFF136DUH, ENCFF136TYP, ENCFF137OYQ, ENCFF140WZW, ENCFF142PTA, ENCFF148BPZ, ENCFF149BQJ, ENCFF149JXW, ENCFF150HVU, ENCFF151XBP, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163BDT, ENCFF163DKN, ENCFF166UTY, ENCFF167EHX, ENCFF167GWU, ENCFF169JOQ, ENCFF170KWW, ENCFF172DMS, ENCFF174EGP, ENCFF177SGB, ENCFF178ZXW, ENCFF179HJV, ENCFF184ALY, ENCFF185TRT, ENCFF186NDY, ENCFF189JVE, ENCFF192XJA, ENCFF194DAO, ENCFF197JAP, ENCFF197TJB, ENCFF198XFF, ENCFF199AAD, ENCFF203EWG, ENCFF205CDI, ENCFF207HZS, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF219PCN, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF223SMG, ENCFF229CPV, ENCFF229TCX, ENCFF233RGQ, ENCFF235HER, ENCFF237HDL, ENCFF237JCE, ENCFF239RQP, ENCFF247VEN, ENCFF248XZC, ENCFF254VIN, ENCFF255ESE, ENCFF255XDN, ENCFF256UWN, ENCFF257EYD, ENCFF260BJB, ENCFF260UQJ, ENCFF261EQP, ENCFF267KZS, ENCFF268YSJ, ENCFF271RFU, ENCFF272VMY, ENCFF275HRX, ENCFF276OPJ, ENCFF280LCC, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF292KWK, ENCFF296ITI, ENCFF296UDD, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF302MXO, ENCFF305GPD, ENCFF306FQJ, ENCFF306OWL, ENCFF307OHZ, ENCFF308WGP, ENCFF310BWG, ENCFF310HAL, ENCFF310WDZ, ENCFF311MZV, ENCFF313IFI, ENCFF315HBU, ENCFF315OFF, ENCFF316EEH, ENCFF319YFJ, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332IRR, ENCFF335UNU, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF343MZH, ENCFF344VGL, ENCFF346NGU, ENCFF346UBA, ENCFF347EUO, ENCFF348RRM, ENCFF350KYC, ENCFF352KGC, ENCFF353SEU, ENCFF357AGP, ENCFF357QTB, ENCFF358UHV, ENCFF359DNK, ENCFF366CSN, ENCFF366IEQ, ENCFF369VAI, ENCFF370VOV, ENCFF371ZDG, ENCFF374VAZ, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF386CRY, ENCFF386HCR, ENCFF386XTQ, ENCFF390AUP, ENCFF390ZZH, ENCFF394AUR, ENCFF397ZQU, ENCFF399TOF, ENCFF399YLV, ENCFF403RPK, ENCFF404HLB, ENCFF406LFV, ENCFF406NLL, ENCFF408FFP, ENCFF411KCB, ENCFF411YXB, ENCFF417INY, ENCFF417OEG, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF423GTP, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF430ERW, ENCFF433QNW, ENCFF437ZSM, ENCFF438ROC, ENCFF439HXQ, ENCFF443URE, ENCFF450CUC, ENCFF453MPR, ENCFF456GLS, ENCFF458EUS, ENCFF460FON, ENCFF460VXC, ENCFF462HZM, ENCFF464KYQ, ENCFF466RIS, ENCFF468RDR, ENCFF469JWF, ENCFF470RDW, ENCFF476JSK, ENCFF477MBL, ENCFF478BEL, ENCFF478MHH, ENCFF479WHZ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF485GFE, ENCFF486BJT, ENCFF486GBM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF497NJW, ENCFF504PGI, ENCFF505PJK, ENCFF505YPK, ENCFF507VMW, ENCFF512LAN, ENCFF512XKX, ENCFF513BRJ, ENCFF515GXB, ENCFF516QKR, ENCFF517BAY, ENCFF517EJZ, ENCFF519AKK, ENCFF522KWW, ENCFF524FJG, ENCFF524PAV, ENCFF527XBQ, ENCFF530DUT, ENCFF531JWM, ENCFF533ZIO, ENCFF536ZVF, ENCFF537DSI, ENCFF538TFM, ENCFF538ZTW, ENCFF541HSQ, ENCFF543GNI, ENCFF543PXT, ENCFF548HOL, ENCFF548JDU, ENCFF549KAB, ENCFF552KEA, ENCFF552LXG, ENCFF557JPW, ENCFF559QXN, ENCFF561CZI, ENCFF563FUC, ENCFF565DII, ENCFF565FFU, ENCFF566HCI, ENCFF569ELL, ENCFF572JDP, ENCFF572SQL, ENCFF573WSG, ENCFF576EOD, ENCFF578MOR, ENCFF578PSU, ENCFF578YPJ, ENCFF581RIR, ENCFF584OOK, ENCFF584ZUK, ENCFF585CYT, ENCFF587HBC, ENCFF588JAU, ENCFF591WVP, ENCFF593TQB, ENCFF594GIP, ENCFF595NMM, ENCFF596PMK, ENCFF597BNT, ENCFF598PMW, ENCFF601JTS, ENCFF603QSQ, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611QZE, ENCFF612KDP, ENCFF613YNK, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF618SIR, ENCFF619SKV, ENCFF620FXM, ENCFF627XGF, ENCFF632HDE, ENCFF633QXI, ENCFF635XED, ENCFF636SOT, ENCFF637CVI, ENCFF637GVH, ENCFF640RWH, ENCFF641CYW, ENCFF644EGG, ENCFF644GYU, ENCFF646GBS, ENCFF647KBV, ENCFF657NUT, ENCFF658NHH, ENCFF661UPO, ENCFF663SPA, ENCFF663TDQ, ENCFF667RGF, ENCFF668SQN, ENCFF669PMR, ENCFF673BPE, ENCFF673ZDG, ENCFF680OWA, ENCFF680WIN, ENCFF681EEO, ENCFF683WFA, ENCFF685GDB, ENCFF687GPO, ENCFF687STH, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF694EPZ, ENCFF696QTS, ENCFF696VQM, ENCFF696XZL, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF705CES, ENCFF706BUS, ENCFF707HQI, ENCFF711XWR, ENCFF712BKP, ENCFF716NXU, ENCFF717GIT, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727EPG, ENCFF737VKP, ENCFF740WXS, ENCFF741PLM, ENCFF743NNG, ENCFF746ZCS, ENCFF747VYT, ENCFF749XRU, ENCFF750IZJ, ENCFF755REI, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF759HJA, ENCFF759WDO, ENCFF764AQK, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF772QLP, ENCFF781XUM, ENCFF786BUI, ENCFF791AUB, ENCFF791ZDR, ENCFF794GVC, ENCFF794MMU, ENCFF796TQV, ENCFF798TFC, ENCFF801SNQ, ENCFF803ZUN, ENCFF804EWD, ENCFF806XNV, ENCFF809QBQ, ENCFF810SCH, ENCFF811ZQO, ENCFF812LAI, ENCFF814PHK, ENCFF814TTQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF819JGD, ENCFF821HAZ, ENCFF825JNK, ENCFF829HAB, ENCFF829WND, ENCFF832FTK, ENCFF834TQY, ENCFF838BEV, ENCFF840EFC, ENCFF845NUY, ENCFF847HFJ, ENCFF847IGW, ENCFF848LWJ, ENCFF848UMJ, ENCFF853PNO, ENCFF854LJN, ENCFF855UFX, ENCFF858OFI, ENCFF859MTL, ENCFF860SGX, ENCFF861RRQ, ENCFF863ENS, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF869MFM, ENCFF875BUD, ENCFF877VSZ, ENCFF881DTW, ENCFF881YOK, ENCFF883APB, ENCFF885ZAO, ENCFF894COY, ENCFF898CAY, ENCFF899EJT, ENCFF900AIQ, ENCFF901KUE, ENCFF903KDM, ENCFF903ULI, ENCFF906CJJ, ENCFF907KCF, ENCFF908MGO, ENCFF910CTW, ENCFF916BSM, ENCFF916JWW, ENCFF917KUH, ENCFF921PGH, ENCFF926FRX, ENCFF926IDV, ENCFF927LFD, ENCFF930JCE, ENCFF931NMQ, ENCFF934QGX, ENCFF935ZEM, ENCFF936LNA, ENCFF939QLN, ENCFF939UBM, ENCFF946LMX, ENCFF948BDY, ENCFF948YKH, ENCFF949QCF, ENCFF950FFF, ENCFF952EQQ, ENCFF952LUC, ENCFF953FGT, ENCFF953POL, ENCFF955WXI, ENCFF955YCX, ENCFF956RCJ, ENCFF958BIE, ENCFF958LRX, ENCFF960QTC, ENCFF962ZCT, ENCFF964DLW, ENCFF964HGL, ENCFF966VVA, ENCFF970LRH, ENCFF970PLY, ENCFF970WCD, ENCFF974KKD, ENCFF974XWJ, ENCFF976SMI, ENCFF983GRF, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF994JUO, ENCFF994PPZ, ENCFF996WVL, ENCFF997QQG, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF399XUL, ENCFF442OKF, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF592WZB, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF847LGC, ENCFF854IBU, ENCFF906OAF, ENCFF932SOZ, ENCFF970VKL, DRR091689, DRR091692, SRR10697196, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR11428468, SRR13142119, SRR13142123, SRR15198226, SRR15198228, SRR2927111, SRR9178984, SRR9178986, SRR9178988, SRR9178990 chr7 18735119 18735172 - Annotated LTR|Gypsy|LTR88a ENSMUSG00000086533.4, Mypopos ENSMUST00000206304.2, ENSMUST00000124897.3, ENSMUST00000206381.3 ENCFF001NDZ, ENCFF001NEC, ENCFF059IQN, ENCFF116MYR, ENCFF139MHN, ENCFF140VGY, ENCFF262URV, ENCFF326TQL, ENCFF420RFN, ENCFF426QFT, ENCFF437AJW, ENCFF533CLY, ENCFF589REP, ENCFF670CXH, ENCFF734FHF, ENCFF784LWT, ENCFF828WIK, ENCFF951MOU, ENCFF993QUE, ENCFF274ESJ, ENCFF532UKS, ENCFF390ZZH, ENCFF397ZQU, ENCFF454DOT, ENCFF490ULA, ENCFF789AOM, ENCFF864DTX, ENCFF949QCF, ENCFF956ZKG, ENCFF186VNL, ENCFF442OKF, ENCFF494ZWE chr7 19018267 19018292 + Predicted LINE|L2|L2a ENSMUSG00000030401.17, Rtn2 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR9178977 chr7 19354616 19354617 - Predicted SINE|Alu|B1_Mus2 ENSMUSG00000002983.18, Relb ENCFF745HSV, ENCFF764ZUI, ENCFF813ZJI, ENCFF823PZU, ENCFF884TJE, ENCFF060FGD, ENCFF174EGP, ENCFF277JGD, ENCFF460FON, ENCFF673ZDG, ENCFF794MMU, ENCFF817NCH, ENCFF900LFN chr7 19356185 19356220 - Predicted SINE|Alu|PB1D9 ENSMUSG00000002983.18, Relb ENCFF027IIP, ENCFF074HUJ, ENCFF108UNS, ENCFF114PSQ, ENCFF117BGT, ENCFF138TOM, ENCFF147GLI, ENCFF198NQV, ENCFF273TLO, ENCFF331WKS, ENCFF352VWM, ENCFF376MQF, ENCFF400XLQ, ENCFF472YPG, ENCFF495SQR, ENCFF581WWO, ENCFF585YYC, ENCFF645QUX, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF723KAG, ENCFF771LLL, ENCFF789LUC, ENCFF792XYG, ENCFF795DLS, ENCFF828WIK, ENCFF844KCR, ENCFF858CRT, ENCFF884DLS, ENCFF896IIZ, ENCFF906FNQ, ENCFF914BRK, ENCFF931DDH, ENCFF970XZM, ENCFF982BLT, ENCFF027GCQ, ENCFF034WGV, ENCFF095NMU, ENCFF118YHP, ENCFF136TYP, ENCFF187BHR, ENCFF237JCE, ENCFF301VMF, ENCFF303BIV, ENCFF338DAA, ENCFF363PDR, ENCFF374VAZ, ENCFF378TYU, ENCFF397ZQU, ENCFF427YDU, ENCFF450CUC, ENCFF484PQK, ENCFF561CZI, ENCFF578YPJ, ENCFF581ZWM, ENCFF595NMM, ENCFF597BNT, ENCFF598PMW, ENCFF603QSQ, ENCFF613YNK, ENCFF644EGG, ENCFF673SLO, ENCFF681EEO, ENCFF696XZL, ENCFF698WQO, ENCFF698XCB, ENCFF711OYQ, ENCFF724VJN, ENCFF726YTS, ENCFF741PLM, ENCFF753HNF, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF770WIT, ENCFF779MMO, ENCFF806MTS, ENCFF851JLX, ENCFF903KDM, ENCFF906CJJ, ENCFF916JWW, ENCFF926IDV, ENCFF927LFD, ENCFF931NMQ, ENCFF970PLY, ENCFF976SMI, ENCFF997QQG chr7 19407844 19407845 - Annotated SINE|Alu|B1_Mus2 ENSMUSG00000002992.18, Apoc2 ENSMUST00000134116.8, NM_001309795.1 SRR13142118, SRR13142119, SRR13142120, SRR2040601, SRR2927111, SRR2927112, SRR9080662 chr7 19697480 19697481 + Predicted LTR|ERVK|RLTR17 ENSMUSG00000060508.17, ENSMUSG00000070777.6, Nlrp9b, Ceacam20 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001RTF, ENCFF001RTJ, DRR091688, DRR091689, DRR091693, DRR091695, DRR091697, SRR10697198, SRR10697200, SRR13142122, SRR15198217, SRR15198218, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004 chr7 22140115 22140116 - Predicted LTR|ERVK|RLTR10-int ENSMUSG00000094542.2, Vmn1r149 SRR2089636, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr7 23761876 23761877 + Predicted LTR|ERVK|RLTR10B ENSMUSG00000118318.2, Vmn1r183 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091698, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178987, SRR9178991 chr7 23781318 23781402 + Annotated LTR|ERVK|RLTR20A4 ENSMUSG00000057101.9, Zfp180 ENSMUST00000207002.2, ENSMUST00000068975.6, ENSMUST00000206184.2, ENSMUST00000203854.3, NM_001289637.1, NM_172483.2, NM_001289641.1, NM_001289640.1, NM_001045486.2, NM_001289634.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002ERU, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF022FSI, ENCFF051PTY, ENCFF059IQN, ENCFF064PBF, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF102BWR, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF139MHN, ENCFF163LPQ, ENCFF178ZVU, ENCFF179WPT, ENCFF189WYV, ENCFF214IUN, ENCFF218HNK, ENCFF225MMR, ENCFF262URV, ENCFF297CWJ, ENCFF326TQL, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF381JXP, ENCFF390QUP, ENCFF421SNO, ENCFF426QFT, ENCFF478FDA, ENCFF482MUH, ENCFF489IGD, ENCFF495YGN, ENCFF502ANK, ENCFF514JOV, ENCFF521IDK, ENCFF527VIY, ENCFF528CBF, ENCFF564OKH, ENCFF564YPB, ENCFF593RAV, ENCFF670CXH, ENCFF696TCH, ENCFF711WAC, ENCFF725RXU, ENCFF761RKP, ENCFF775BPV, ENCFF782JNB, ENCFF796NHQ, ENCFF802GAN, ENCFF813GGJ, ENCFF828WIK, ENCFF841OXD, ENCFF852ZDB, ENCFF865WQE, ENCFF874ELO, ENCFF880FYC, ENCFF888LGA, ENCFF915FID, ENCFF922KQY, ENCFF937GBW, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF234LUQ, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF385UBP, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF831ISX, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF004AEL, ENCFF015JJB, ENCFF041PJP, ENCFF046HWP, ENCFF053NFR, ENCFF065ZIE, ENCFF085RPW, ENCFF087IUJ, ENCFF116QKZ, ENCFF156XMZ, ENCFF172DMS, ENCFF178ZXW, ENCFF199AAD, ENCFF235HER, ENCFF258WLS, ENCFF267KZS, ENCFF279EVY, ENCFF291SCS, ENCFF299ENO, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF338LFG, ENCFF344VGL, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF406LFV, ENCFF417OEG, ENCFF424GQM, ENCFF430ERW, ENCFF459TYQ, ENCFF482VRF, ENCFF490ULA, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF536ZVF, ENCFF543PXT, ENCFF552KEA, ENCFF563FUC, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF611OFH, ENCFF618PVF, ENCFF619SKV, ENCFF637PIP, ENCFF644GYU, ENCFF680WIN, ENCFF689ZLL, ENCFF698WQO, ENCFF705CES, ENCFF707HQI, ENCFF713JXV, ENCFF723QWN, ENCFF751QWY, ENCFF806XNV, ENCFF834TQY, ENCFF838BEV, ENCFF864DTX, ENCFF867FTP, ENCFF894SHM, ENCFF921PGH, ENCFF959CWA, ENCFF960QTC, ENCFF970LRH, ENCFF994PPZ, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF319SDE, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF641WPY, ENCFF653QJY, ENCFF667KKO, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080666, SRR9178976, SRR9178977, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 24327196 24327197 + Predicted SINE|Alu|B1F2 ENSMUSG00000074277.5, Phldb3 SRR15198217, SRR15198220, SRR15198226, SRR15198228, SRR9178978, SRR9178989, SRR9178991, SRR9178992 chr7 24360719 24360720 + Annotated SINE|B4|RSINE1 ENSMUSG00000108470.2, Gm4598 ENSMUST00000206756.2, NR_030681.1 chr7 27255840 27255841 + Predicted SINE|MIR|MIRb ENSMUSG00000049643.16, 2310022A10Rik ENCFF002DMZ, ENCFF002DNB, ENCFF002ERU, ENCFF102BWR, ENCFF330IYN, ENCFF437AJW, ENCFF450WAV, ENCFF888HEF, ENCFF993QUE, ENCFF013HYW, ENCFF199ZDO, ENCFF245ZOR, ENCFF326UXM, ENCFF379TZT, ENCFF532UKS, ENCFF590LNP, ENCFF721ASG, ENCFF397MUI, ENCFF427YDU, ENCFF075EMK, ENCFF555BQD, ENCFF574YMK, ENCFF582WGH, ENCFF720MPJ, ENCFF728WJB, ENCFF854IBU, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR9080666 chr7 27273696 27273878 + Predicted SINE|Alu|PB1D10 ENSMUSG00000049643.16, 2310022A10Rik ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF059IQN, ENCFF084PUC, ENCFF090USB, ENCFF091WMS, ENCFF115KZV, ENCFF116MYR, ENCFF120DEX, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF221JIC, ENCFF221JNS, ENCFF225MMR, ENCFF261OTH, ENCFF264DCN, ENCFF274WSX, ENCFF287KDR, ENCFF296ASE, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF347HAB, ENCFF363CYZ, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF393YET, ENCFF404PYQ, ENCFF420RFN, ENCFF421SNO, ENCFF445BBH, ENCFF449MIK, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF533JUU, ENCFF548SLN, ENCFF564OKH, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF623BKO, ENCFF683RFI, ENCFF707QJV, ENCFF710DAI, ENCFF711WAC, ENCFF725RXU, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF813ZJI, ENCFF841OXD, ENCFF844QDN, ENCFF851ESH, ENCFF858CRT, ENCFF865WQE, ENCFF878SQO, ENCFF880FYC, ENCFF884DLS, ENCFF896MQK, ENCFF922KQY, ENCFF931PFF, ENCFF933UPG, ENCFF935XRF, ENCFF937GBW, ENCFF941QCZ, ENCFF956WVJ, ENCFF989HJD, ENCFF991TPB, ENCFF996STG, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF061WTN, ENCFF065ZIE, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF080BTV, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF098AYQ, ENCFF103SQR, ENCFF111MWQ, ENCFF120SMK, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF162FTA, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF174EGP, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF220GKL, ENCFF221ZQB, ENCFF222MKT, ENCFF235HER, ENCFF243LBQ, ENCFF243TPB, ENCFF247VEN, ENCFF255XDN, ENCFF256UWN, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF278JAU, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF306OWL, ENCFF310HAL, ENCFF310WDZ, ENCFF313IFI, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF380LXU, ENCFF390AUP, ENCFF397MUI, ENCFF397ZQU, ENCFF406LFV, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF426ETE, ENCFF429TQT, ENCFF430ERW, ENCFF450CUC, ENCFF454DOT, ENCFF458EUS, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF487OHM, ENCFF492HRC, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF572SQL, ENCFF576EOD, ENCFF578PSU, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF594GIP, ENCFF596INO, ENCFF598WAL, ENCFF601JTS, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF618PVF, ENCFF619SKV, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF640RWH, ENCFF644GYU, ENCFF647RUH, ENCFF656DRS, ENCFF672WYO, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF707HQI, ENCFF711XWR, ENCFF712BKP, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF743NNG, ENCFF749XRU, ENCFF751QWY, ENCFF758BKM, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF770WIT, ENCFF780UQU, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF816CPX, ENCFF821HAZ, ENCFF830CBI, ENCFF838BEV, ENCFF860SGX, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF881YOK, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF907KCF, ENCFF921PGH, ENCFF927LFD, ENCFF931NMQ, ENCFF932XKS, ENCFF934VFW, ENCFF938XTE, ENCFF952LUC, ENCFF953WBM, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF962ZCT, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF994PPZ, ENCFF999ZYF chr7 27867252 27867253 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000046865.8, Fbl ENCFF245ZOR, ENCFF369YLA, ENCFF391UFN, ENCFF636NES, ENCFF657FNE, ENCFF714CKE, ENCFF829RHM, ENCFF254YNR, ENCFF277QHC, ENCFF626KIV, ENCFF733LFV, ENCFF782WDV, ENCFF888IIL chr7 28142532 28142533 + Annotated SINE|MIR|MIRb ENSMUSG00000060791.16, Gmfg ENSMUST00000138741.2 chr7 28191975 28191976 + Annotated LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000099417.2, 1700028B04Rik ENSMUST00000190841.2 DRR091691, DRR091692, DRR091694, DRR091697, SRR11428468, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178976 chr7 28386893 28386900 + Predicted LTR|ERVL|MERVL_2A-int ENSMUSG00000037463.15, Fbxo27 DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9080662, SRR9178978, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178989, SRR9178991 chr7 28856305 28856346 - Predicted SINE|B2|B3 ENSMUSG00000030590.16, Fam98c ENCFF013CHH, ENCFF195JLT, ENCFF271OHB, ENCFF296VFB, ENCFF308FEA, ENCFF374YTS, ENCFF587VDB, ENCFF657FNE, ENCFF854MWX, ENCFF914YDJ, ENCFF349AIG, ENCFF477YHR, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 28987683 28987684 - Predicted SINE|Alu|B1F ENSMUSG00000074227.13, Spint2 DRR091688, DRR091691, DRR091699, SRR11428468, SRR2927113, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 30119419 30119420 - Predicted LINE|L2|L2 ENSMUSG00000064109.9, Hcst ENCFF143PHU, ENCFF178ZVU, ENCFF179WPT, ENCFF186RYS, ENCFF218HNK, ENCFF277XPM, ENCFF363CYZ, ENCFF495YGN, ENCFF590NVM, ENCFF595GFM, ENCFF782JNB, ENCFF858CRT, ENCFF931PFF, ENCFF004AEL, ENCFF015JJB, ENCFF034WGV, ENCFF094RHV, ENCFF156ZQH, ENCFF158HQO, ENCFF243TPB, ENCFF306OWL, ENCFF346HDC, ENCFF387BVS, ENCFF406LFV, ENCFF422ZNC, ENCFF458EUS, ENCFF517EJZ, ENCFF633QXI, ENCFF751QWY, ENCFF806MTS, ENCFF872SFD, ENCFF926FRX, ENCFF952FJN, ENCFF952LUC, ENCFF970LRH, ENCFF302TQH, SRR2040601 chr7 3214330 3214331 - Annotated LTR|ERVK|RMER6B ENSMUSG00000054753.10, AU018091 ENSMUST00000205185.2 SRR15198228, SRR9178986 chr7 32189512 32189580 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000101270.2, Scgb2b9-ps ENCFF013HYW, ENCFF017LOD, ENCFF027RRZ, ENCFF033ZUH, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF170XMM, ENCFF173IVH, ENCFF199ZDO, ENCFF223BXU, ENCFF236TUH, ENCFF251WZA, ENCFF269WEZ, ENCFF270ERO, ENCFF284AEN, ENCFF304DLW, ENCFF315OOH, ENCFF330FNX, ENCFF339MSB, ENCFF364LFJ, ENCFF390NKP, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF467LJD, ENCFF484HRX, ENCFF510LAE, ENCFF521NCL, ENCFF567AFB, ENCFF573UIH, ENCFF581KUX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF651SDJ, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF721ASG, ENCFF728TXU, ENCFF737OUQ, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF775SSI, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF826RUZ, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF855FCX, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF933KQV, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF969WLB, ENCFF975NCY, ENCFF978EQI, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF423TSB, ENCFF446LMP, ENCFF481CFU, ENCFF555BQD, ENCFF641WPY, ENCFF667KKO, ENCFF671TUD, ENCFF715CAJ, ENCFF723MAR, ENCFF827NYZ, ENCFF906OAF chr7 33352725 33352776 - Predicted LTR|ERVK|IAPLTR3 ENSMUSG00000121416.1, Scgb2b23-ps DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR5643199, SRR5643201, SRR6338004, SRR6904684, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 33832659 33832738 - Annotated LTR|ERVK|RMER17A-int ENSMUSG00000036459.16, Wtip ENSMUST00000038537.9, NM_207212.2 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF033ZUH, ENCFF060JCS, ENCFF101BDM, ENCFF115LWP, ENCFF143BIC, ENCFF173IVH, ENCFF199ZDO, ENCFF251WZA, ENCFF270ERO, ENCFF271OHB, ENCFF304DLW, ENCFF315OOH, ENCFF330FNX, ENCFF339MSB, ENCFF364LFJ, ENCFF377LAC, ENCFF444YCN, ENCFF484HRX, ENCFF573UIH, ENCFF581KUX, ENCFF592GVA, ENCFF654AEJ, ENCFF670FEL, ENCFF697AST, ENCFF704WWK, ENCFF725ATS, ENCFF728TXU, ENCFF737OUQ, ENCFF756QCA, ENCFF766LGO, ENCFF785TEQ, ENCFF808PVJ, ENCFF826RUZ, ENCFF829RHM, ENCFF912MUD, ENCFF943XKB, ENCFF962FIU, ENCFF964WZW, ENCFF967NOO, ENCFF160TQC, ENCFF197NCG, ENCFF242SVY, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF510IAG, ENCFF517DCU, ENCFF555BQD, ENCFF716YKR, ENCFF728WJB, ENCFF906OAF, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113 chr7 33933866 33933867 + Annotated SINE|Alu|B1F ENSMUSG00000085105.3, Gm12758 ENSMUST00000205940.2 ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, ENCFF967NOO, SRR2927111 chr7 34095473 34095475 - Predicted LTR|ERVL|MLT2B2 ENSMUSG00000066568.13, Lsm14a ENCFF641QXI, ENCFF532UKS, ENCFF945ICZ, ENCFF867FTP, ENCFF014SLC, ENCFF671TUD chr7 34750929 34750930 - Annotated SINE|Alu|B1_Mur4 ENSMUSG00000056216.10, Cebpg ENSMUST00000205752.2 chr7 34767405 34767406 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000056216.10, ENSMUSG00000108739.2, Cebpg, Gm45096 DRR091691, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697202, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9178981, SRR9178982, SRR9178985 chr7 35870717 35870737 + Predicted LINE|L1|Lx8b ENSMUSG00000098016.2, Gm9211 DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697201, SRR11428467, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2927112, SRR2927113, SRR9178976, SRR9178979, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178990 chr7 37885696 37885697 + Annotated SINE|Alu|PB1D10 ENSMUSG00000054676.18, 1600014C10Rik ENSMUST00000179503.5 chr7 38215029 38215034 + Predicted LTR|ERVL-MaLR|ORR1A1 ENSMUSG00000100169.2, Gm29087 SRR2089604, SRR2089606, SRR2089609, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089632, SRR2089633, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr7 40793123 40793124 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000108754.2, Gm44748 SRR6338004, SRR6904683, SRR6904685 chr7 43186937 43186975 - Predicted Retroposon|L1-dep|RMER1B ENSMUSG00000004609.12, Cd33 DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697201, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178987, SRR9178988 chr7 43596935 43596936 + Predicted SINE|Alu|B1F ENSMUSG00000063089.5, Klk1b8 DRR091690, DRR091691, DRR091693, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428468, SRR11428469, SRR15198226, SRR2040601 chr7 43898967 43898968 + Predicted SINE|Alu|PB1D10 ENSMUSG00000045411.17, 2410002F23Rik ENCFF993QUE, ENCFF642YTY, ENCFF009AON, ENCFF177SGB, ENCFF334XFS, ENCFF426ZCK, ENCFF609WDV, ENCFF781MKK chr7 4463185 4463187 - Predicted LTR|ERVK|IAPEz-int ENSMUSG00000091177.3, Gm15494 ENCFF001NCP, ENCFF181RDS, ENCFF993QUE, ENCFF115LWP, ENCFF247QZW, ENCFF296VFB, ENCFF587VDB, ENCFF933KQV, ENCFF248ELC, ENCFF582WGH, ENCFF970VKL chr7 44645328 44645329 + Predicted LTR|ERV1|RMER21A ENSMUSG00000003184.16, Irf3 SRR2089643, SRR2089648, SRR2089651 chr7 44647684 44647724 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000003184.16, Irf3 ENCFF002EZY, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142119, SRR13142121, SRR13142122, SRR15198219, SRR15198221, SRR15198222, SRR15198226, SRR15198228, SRR2040601, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 44775960 44775962 - Annotated SINE|MIR|MIRb ENSMUSG00000074129.15, Rpl13a ENSMUST00000210931.3 ENCFF048FGD, ENCFF051JGE, ENCFF143PHU, ENCFF221NAP, ENCFF452AXW, ENCFF502ANK, ENCFF888LGA, ENCFF197OUM, ENCFF302KQL, ENCFF538AIM, SRR6904683, SRR6904684, SRR6904685 chr7 45190053 45190081 + Predicted DNA|hAT-Charlie|URR1A ENSMUSG00000040428.20, Plekha4 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428470, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 45336907 45336908 + Predicted SINE|MIR|MIR ENSMUSG00000070564.16, Ntn5 ENCFF002EZW, DRR091694, DRR091697, SRR11428468, SRR11428470, SRR13142119, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9080666, SRR9178980, SRR9178981, SRR9178985 chr7 45573352 45573389 - Predicted DNA|hAT-Charlie|URR1B ENSMUSG00000040212.13, ENSMUSG00000110208.2, Emp3, Gm45442 ENCFF002FAI, DRR091688, DRR091689, DRR091690, DRR091691, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR13142121, SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR2040601, SRR2927113, SRR9080662, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178990, SRR9178991, SRR9178992 chr7 46321960 46321961 - Annotated SINE|Alu|PB1 ENSMUSG00000040046.15, Tph1 ENSMUST00000049298.15, NM_009414.3 chr7 4662925 4662985 - Predicted LTR|ERVL-MaLR|MTEb ENSMUSG00000052296.8, Ppp6r1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178983, SRR9178985, SRR9178987, SRR9178989, SRR9178990 chr7 48532084 48532085 - Predicted SINE|MIR|MIR3 ENSMUSG00000046179.18, E2f8 ENCFF051JSS, ENCFF142CUS, ENCFF178PMH, ENCFF261OTH, ENCFF296ASE, ENCFF305IXM, ENCFF310HPH, ENCFF514BEA, ENCFF521UGJ, ENCFF564OKH, ENCFF595GFM, ENCFF623BKO, ENCFF813GGJ, ENCFF851ESH, ENCFF878SQO, ENCFF933UPG, ENCFF934ZAP, ENCFF234LUQ, ENCFF609ZVL, ENCFF970VKB, ENCFF121IDD, ENCFF163DKN, ENCFF184ALY, ENCFF197TJB, ENCFF237JCE, ENCFF271RFU, ENCFF286RSE, ENCFF303BIV, ENCFF380BYT, ENCFF426ZCK, ENCFF456GLS, ENCFF462HZM, ENCFF585CYT, ENCFF724VJN, ENCFF814PHK, ENCFF894COY, ENCFF927LFD, ENCFF985NHB, ENCFF994PPZ chr7 58872855 58872856 + Predicted LINE|L1|L1_Rod ENSMUSG00000025326.13, Ube3a ENCFF148XRK, ENCFF156YWS, ENCFF199IRM, ENCFF222GPK, ENCFF308FEA, ENCFF408NBX, ENCFF465BBM, ENCFF478KOR, ENCFF725ATS chr7 60392675 60392676 - Predicted LINE|L1|Lx3C ENSMUSG00000102252.6, ENSMUSG00000109222.2, Snrpn, Gm10297 ENCFF002EZW, ENCFF005GQR, ENCFF222GPK, ENCFF247QZW, ENCFF269SRJ, ENCFF271OHB, ENCFF326UXM, ENCFF335ZSA, ENCFF355AMN, ENCFF454ZUS, ENCFF468AKL, ENCFF487DYP, ENCFF500QZK, ENCFF595WXV, ENCFF632LPV, ENCFF647TTU, ENCFF657FNE, ENCFF733MXU, ENCFF744OEI, ENCFF818BAS, ENCFF854MWX, ENCFF886BRO, ENCFF914YDJ, ENCFF924LPZ, ENCFF269AST, ENCFF399XUL, ENCFF911OIZ chr7 60724121 60724122 - Predicted LINE|L1|L1MdF_IV ENSMUSG00000068151.9, ENSMUSG00000120237.1, A230006K03Rik, ENSMUSG00000120237 ENCFF002EZU, ENCFF002EZY, ENCFF002FAI chr7 61463938 61463939 - Predicted LTR|ERVK|RMER6D ENSMUSG00000109394.3, A230057D06Rik ENCFF101BDM, ENCFF636NES, SRR13142121, SRR13142122, SRR6338004 chr7 61479169 61479170 - Annotated LTR|ERV1|MuRRS4-int ENSMUSG00000109394.3, A230057D06Rik ENSMUST00000208953.2 DRR091695, SRR13142120, SRR15198224, SRR2927112 chr7 61479683 61479687 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000109394.3, A230057D06Rik DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, SRR10697196, SRR10697197, SRR10697198, SRR10697203, SRR11428467, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR9178982 chr7 61578437 61578438 - Annotated LINE|L1|Lx3B ENSMUSG00000109394.3, A230057D06Rik ENSMUST00000207061.2 ENCFF377UGQ, ENCFF744OEI, ENCFF967NOO chr7 61764477 61764522 - Predicted LTR|ERVK|ERVB4_2-I_MM ENSMUSG00000045813.8, Gm9801 ENCFF005GQR, ENCFF013CHH, ENCFF065LOT, ENCFF065TCZ, ENCFF156YWS, ENCFF222GPK, ENCFF247QZW, ENCFF296VFB, ENCFF308FEA, ENCFF326UXM, ENCFF335ZSA, ENCFF348FTH, ENCFF377UGQ, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF465BBM, ENCFF478KOR, ENCFF487DYP, ENCFF510TTU, ENCFF587VDB, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF654AEJ, ENCFF725ATS, ENCFF733MXU, ENCFF747XPP, ENCFF818BAS, ENCFF854MWX, ENCFF860XMD, ENCFF914YDJ, ENCFF967NOO, ENCFF008XVO, ENCFF119IHT, ENCFF269AST, ENCFF399XUL, ENCFF499CDP, ENCFF510IAG, ENCFF525QIM, ENCFF670VVN, ENCFF749STK, ENCFF803OIY, ENCFF847LGC, ENCFF911OIZ chr7 61764681 61764682 - Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000045813.8, Gm9801 ENCFF148XRK, ENCFF271OHB, ENCFF374YTS, ENCFF448TTG, ENCFF454ZUS, ENCFF468AKL, ENCFF500QZK, ENCFF595WXV, ENCFF721BNO, ENCFF831ISX, ENCFF962OCF, ENCFF510AYI, ENCFF932SOZ, ENCFF970VKL chr7 66995429 66995434 - Predicted LINE|L1|L1MdF_V ENSMUSG00000030557.18, Mef2a SRR2089613, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr7 71559169 71559179 + Predicted LTR|ERVK|RMER17B2 ENSMUSG00000108669.2, 4930441H08Rik DRR091688, DRR091689, DRR091690, DRR091692, DRR091694, DRR091695, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 71559232 71559233 + Predicted LTR|ERVK|RMER17B2 ENSMUSG00000108669.2, 4930441H08Rik DRR091688, DRR091689, DRR091690, DRR091692, DRR091694, DRR091695, DRR091697, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 71559298 71559299 + Predicted LTR|ERVK|RMER17B2 ENSMUSG00000108669.2, 4930441H08Rik DRR091690, DRR091697, DRR091699, SRR11428467, SRR11428468, SRR15198220, SRR15198222, SRR15198227, SRR9080664, SRR9178977 chr7 72796529 72796530 - Predicted SINE|MIR|MIRc ENSMUSG00000108383.2, Gm6567 SRR10697201, SRR10697203, SRR13142118, SRR15198226, SRR15198228, SRR2927111, SRR2927112 chr7 72960128 72960129 + Annotated SINE|MIR|MIRb ENSMUSG00000108530.2, 4930429H19Rik ENSMUST00000205260.2, NR_105062.1 DRR091690, DRR091691, DRR091692, DRR091693, DRR091696, DRR091697, DRR091698, SRR13142119, SRR13142121, SRR13142122, SRR3178204 chr7 7303930 7303931 - Predicted LINE|L1|L1MdF_IV ENSMUSG00000000605.10, Clcn4 ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAG, ENCFF345BBC, ENCFF374YTS, ENCFF454ZUS, ENCFF468AKL, ENCFF533DWD, ENCFF636NES, ENCFF657FNE, ENCFF914YDJ, ENCFF933KQV, ENCFF269AST, ENCFF477YHR chr7 75318769 75318815 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000066406.17, Akap13 ENCFF064PBF, ENCFF082HKQ, ENCFF432ZLQ, ENCFF489VZI, ENCFF552DRF, ENCFF570GTP, ENCFF585YYC, ENCFF707QJV, ENCFF710DAI, ENCFF771LLL, ENCFF792XYG, ENCFF828WIK, ENCFF876MJS, ENCFF883UYA, ENCFF962LFN, ENCFF985BLV, ENCFF003GJV, ENCFF006JHA, ENCFF019PWU, ENCFF060FGD, ENCFF065UBR, ENCFF077CYB, ENCFF077YZF, ENCFF078CCF, ENCFF080BTV, ENCFF090EUZ, ENCFF111MWQ, ENCFF134PXJ, ENCFF149BQJ, ENCFF167GWU, ENCFF174EGP, ENCFF201IQS, ENCFF237JCE, ENCFF249LSC, ENCFF272VMY, ENCFF286RSE, ENCFF301VMF, ENCFF332RWQ, ENCFF338DAA, ENCFF363PDR, ENCFF414IHO, ENCFF420RGI, ENCFF422ZNC, ENCFF427YDU, ENCFF470RDW, ENCFF497NJW, ENCFF518TUP, ENCFF536ZFC, ENCFF552LXG, ENCFF578MOR, ENCFF598PMW, ENCFF601JTS, ENCFF637GVH, ENCFF647KBV, ENCFF655KBW, ENCFF673ZDG, ENCFF685FUZ, ENCFF685GDB, ENCFF717GIT, ENCFF726YTS, ENCFF741PLM, ENCFF753HNF, ENCFF758BKM, ENCFF779MMO, ENCFF791AUB, ENCFF796TQV, ENCFF814PHK, ENCFF821HAZ, ENCFF834TET, ENCFF859MTL, ENCFF881YOK, ENCFF927LFD, ENCFF964HGL, ENCFF970PLY, ENCFF971DTR, ENCFF976SMI, ENCFF984QED, ENCFF985NHB, ENCFF986DZE, ENCFF998BIQ chr7 75396509 75396510 + Predicted LINE|RTE-BovB|MamRTE1 ENSMUSG00000066406.17, Akap13 ENCFF002ERU, ENCFF452AXW, ENCFF502ANK, ENCFF438ROC, ENCFF538AIM, ENCFF565YJQ, ENCFF689ZLL, SRR11428468, SRR15198223 chr7 76358821 76358822 - Predicted LINE|L1|L1MdA_II ENSMUSG00000108771.2, Gm45210 SRR15198227, SRR2089622, SRR2089636, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr7 78573633 78573634 - Annotated LTR|ERVK|RLTR33 ENSMUSG00000108670.2, Gm44815 ENSMUST00000206812.2 chr7 79402197 79402198 + Predicted DNA|TcMar-Tigger|Tigger19b ENSMUSG00000039099.8, Wdr93 SRR3178205, SRR3178206, SRR6904683, SRR6904684, SRR6904685 chr7 80854758 80854759 + Annotated SINE|B4|RSINE1 ENSMUSG00000109323.2, Gm44968 ENSMUST00000207652.2 SRR10697197, SRR10697203, SRR11428467, SRR13142119, SRR15198227, SRR9178982 chr7 81492945 81493010 + Annotated LTR|ERVL-MaLR|ORR1C1 ENSMUSG00000120034.1, ENSMUSG00000120034 ENSMUST00000241097.1, ENSMUST00000245715.1 ENCFF027IIP, ENCFF059IQN, ENCFF090USB, ENCFF104LLO, ENCFF159OVE, ENCFF178PMH, ENCFF296ASE, ENCFF310HPH, ENCFF344ILW, ENCFF345OIF, ENCFF470MXU, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF725RXU, ENCFF802GAN, ENCFF841OXD, ENCFF951MOU, ENCFF009AON, ENCFF023TPS, ENCFF027GBM, ENCFF037IZV, ENCFF052RNG, ENCFF053NFR, ENCFF056UGH, ENCFF073RJJ, ENCFF080REY, ENCFF082BJV, ENCFF088SVK, ENCFF133KGZ, ENCFF197TJB, ENCFF243LBQ, ENCFF267KZS, ENCFF286GUQ, ENCFF302MXO, ENCFF320CXH, ENCFF321NRW, ENCFF338LFG, ENCFF341YZB, ENCFF357QTB, ENCFF369VAI, ENCFF408FFP, ENCFF411KCB, ENCFF429ZEH, ENCFF430ERW, ENCFF482VRF, ENCFF487OHM, ENCFF517EJZ, ENCFF538TFM, ENCFF541HSQ, ENCFF548JDU, ENCFF566HCI, ENCFF569ELL, ENCFF584OOK, ENCFF591WVP, ENCFF606XHA, ENCFF609WDV, ENCFF627XGF, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF705CES, ENCFF743NNG, ENCFF749XRU, ENCFF751QWY, ENCFF830CBI, ENCFF834TQY, ENCFF863LMG, ENCFF869DVY, ENCFF871CMC, ENCFF877VSZ, ENCFF886UAF, ENCFF921PGH, ENCFF952LUC, ENCFF953WBM, ENCFF955YCX, ENCFF959CWA, ENCFF960QTC, ENCFF983GRF chr7 81811205 81811206 + Predicted LTR|ERVK|RLTR20A3_MM ENSMUSG00000030638.14, ENSMUSG00000108868.2, Sh3gl3, Gm32850 SRR13142119, SRR15198217, SRR15198219, SRR15198226 chr7 82505461 82505483 + Annotated DNA|hAT-Tip100|MER115 ENSMUSG00000030636.16, 1700010L04Rik ENSMUST00000178848.6, ENSMUST00000032872.11 DRR091697, SRR10697203, SRR13142118, SRR13142119, SRR13142120, SRR15198219, SRR2040601, SRR9178978, SRR9178979, SRR9178981, SRR9178989, SRR9178992 chr7 82620598 82620624 - Annotated LTR|ERVL-MaLR|ORR1E NR_045855.1 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr7 86425747 86425769 - Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000001773.15, Folh1 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 89695580 89695581 - Annotated LTR|ERVL|RMER15 ENSMUSG00000120977.1, ENSMUSG00000120977 ENSMUST00000247053.1 ENCFF793IYH chr7 89776252 89776253 - Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000097162.4, 2310010J17Rik ENCFF102BWR, ENCFF297BEX, ENCFF345OIF, ENCFF437AJW, ENCFF450WAV, ENCFF426FAF, ENCFF548JDU, ENCFF609WDV, ENCFF926FRX, SRR6904683, SRR6904684, SRR6904685 chr7 92631312 92631325 + Annotated LTR|ERVK|RLTR26C_MM ENSMUSG00000121498.1, ENSMUSG00000121498 ENSMUST00000247422.1 ENCFF067UCQ, ENCFF134HVE, ENCFF170XMM, ENCFF236TUH, ENCFF270ERO, ENCFF304DLW, ENCFF390NKP, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF604SXL, ENCFF657UWH, ENCFF686KMX, ENCFF756QCA, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF939IUH, ENCFF160TQC, ENCFF199IWW, ENCFF319SDE, ENCFF344OJQ, ENCFF423TSB, ENCFF641WPY, ENCFF723MAR chr7 95991158 95991187 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000085751.2, Gm15412 ENSMUST00000137193.2, NR_046043.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr7 96596231 96596246 - Annotated LTR|ERVK|RMER17B ENSMUSG00000085560.3, C230038L03Rik ENSMUST00000136294.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR5643190, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 97100496 97100547 + Annotated LTR|ERVK|RLTR49 ENSMUSG00000051727.15, Kctd14 ENSMUST00000206658.2, NM_001136235.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091697, SRR10697199, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080665 chr7 97294318 97294353 - Annotated SINE|Alu|B1F ENSMUSG00000086433.2, Rsf1os1 ENSMUST00000126902.2, NR_126461.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643199, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 97752535 97752589 - Predicted LTR|ERVK|RLTR20C1_MM ENSMUSG00000030761.17, Myo7a ENSMUST00000155637.8, ENSMUST00000149079.2 ENCFF001NCP, ENCFF001NCR, ENCFF001RTD, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF450WAV, ENCFF005GQR, ENCFF065LOT, ENCFF199IRM, ENCFF296VFB, ENCFF355AMN, ENCFF448TTG, ENCFF533DWD, ENCFF632LPV, ENCFF654AEJ, ENCFF721BNO, ENCFF725ATS, ENCFF733MXU, ENCFF747XPP, ENCFF860XMD, ENCFF962OCF, ENCFF269AST, ENCFF510AYI, ENCFF510IAG, ENCFF749STK, ENCFF932SOZ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927113, SRR5643199, SRR6338004, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr7 97811416 97811417 - Annotated SINE|MIR|MIR ENSMUSG00000035547.15, Capn5 ENSMUST00000134638.2 ENCFF002EZW, ENCFF002EZY, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF084DCW, ENCFF106GQS, ENCFF437AJW, ENCFF502ANK, ENCFF725ATS, ENCFF785TEQ, ENCFF002SZY, ENCFF615ULR chr7 99228838 99228853 + Predicted LTR|ERVL-MaLR|MLT1O ENSMUSG00000018909.16, Arrb1 ENCFF001NDA, ENCFF001NDD, ENCFF002EZY, ENCFF005GQR, ENCFF013CHH, ENCFF065TCZ, ENCFF148XRK, ENCFF222GPK, ENCFF247QZW, ENCFF269SRJ, ENCFF271OHB, ENCFF296VFB, ENCFF335ZSA, ENCFF355AMN, ENCFF374YTS, ENCFF377UGQ, ENCFF379TZT, ENCFF394BDJ, ENCFF448TTG, ENCFF465BBM, ENCFF468AKL, ENCFF487DYP, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF632LPV, ENCFF636NES, ENCFF654AEJ, ENCFF657FNE, ENCFF733MXU, ENCFF744OEI, ENCFF818BAS, ENCFF854MWX, ENCFF886BRO, ENCFF924LPZ, ENCFF962OCF, ENCFF967NOO, ENCFF075EMK, ENCFF399XUL, ENCFF670VVN, ENCFF932SOZ, ENCFF970VKL chr7 99605242 99605250 - Predicted LINE|L2|L2a ENSMUSG00000058761.6, Rnf169 ENCFF002FAI, ENCFF287KDR, ENCFF525POD, ENCFF884DLS, ENCFF931HCN, ENCFF733MXU, ENCFF035BBA, ENCFF111MWQ, ENCFF169JOQ, ENCFF207HZS, ENCFF207RVA, ENCFF286RSE, ENCFF310WDZ, ENCFF438ROC, ENCFF522KWW, ENCFF585CYT, ENCFF597BNT, ENCFF612KDP, ENCFF640RWH, ENCFF668SQN, ENCFF673SLO, ENCFF930JCE, ENCFF931NMQ chr7 99608487 99608516 - Predicted LINE|L1|L1MdF_III ENSMUSG00000058761.6, Rnf169 ENCFF107XGE, ENCFF133PEB, ENCFF322VJD, ENCFF403ORF, ENCFF489IGD, ENCFF497YRP, ENCFF554PUC, ENCFF823PZU, ENCFF906FNQ, ENCFF942WIP, ENCFF013SNI, ENCFF043DTH, ENCFF166UTY, ENCFF285NFL, ENCFF311MZV, ENCFF386HCR, ENCFF437ZSM, ENCFF632HDE, ENCFF856UMI, ENCFF903KDM, ENCFF917KUH, ENCFF955WXI, ENCFF956RCJ, ENCFF958LRX, ENCFF996WVL chr8 102264558 102264559 - Predicted LINE|L1|Lx7 ENSMUSG00000087985.3, Gm22223 SRR2089617, SRR2089618, SRR2089634 chr8 102265275 102265276 - Predicted Retroposon|L1-dep|RMER1A ENSMUSG00000087985.3, Gm22223 SRR2089603, SRR2089612, SRR2089613, SRR2089614, SRR2089617, SRR2089618, SRR2089620 chr8 104023485 104023504 + Predicted SINE|B4|ID_B1 ENSMUSG00000109701.2, Gm32531 DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178988, SRR9178989 chr8 104912474 104912478 - Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000074128.5, Gm10631 DRR091689, DRR091690, DRR091691, DRR091693, DRR091698, SRR10697201, SRR15198220, SRR15198221, SRR15198224, SRR15198227, SRR2040601, SRR6338004, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 105437881 105437915 + Annotated LTR|ERVK|RLTR13D3A1 ENSMUSG00000110497.2, 9230110F11Rik ENSMUST00000212403.2, ENSMUST00000212907.2 chr8 106214498 106214499 - Predicted SINE|Alu|PB1D9 ENSMUSG00000039199.7, Zdhhc1 ENCFF002FAA, ENCFF347HAB, ENCFF426QFT, ENCFF385UBP, ENCFF609KQB, ENCFF118PQI, ENCFF928YDQ, DRR091690 chr8 106664899 106665086 - Annotated SINE|B2|B3A ENSMUSG00000031897.10, Psmb10 ENSMUST00000034369.10, NM_013640.3 ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTN, ENCFF002ERW, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF074HTO, ENCFF082HKQ, ENCFF083BIG, ENCFF084PUC, ENCFF092YWY, ENCFF142CUS, ENCFF312CZB, ENCFF376MQF, ENCFF502ANK, ENCFF581WWO, ENCFF585YYC, ENCFF654BXL, ENCFF727WWV, ENCFF764EJV, ENCFF783MLO, ENCFF784LWT, ENCFF915FID, ENCFF931DDH, ENCFF934ULS, ENCFF962LFN, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF170XMM, ENCFF173IVH, ENCFF199IRM, ENCFF222GPK, ENCFF223BXU, ENCFF236TUH, ENCFF247QZW, ENCFF251WZA, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF355AMN, ENCFF364LFJ, ENCFF369YLA, ENCFF377LAC, ENCFF377UGQ, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF510TTU, ENCFF521NCL, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF592GVA, ENCFF595WXV, ENCFF604SXL, ENCFF608LAL, ENCFF632LPV, ENCFF636NES, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657OJR, ENCFF657UWH, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF697AST, ENCFF704WWK, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF975NCY, ENCFF144EDQ, ENCFF205CDI, ENCFF209RRO, ENCFF257EYD, ENCFF267VBU, ENCFF276OPJ, ENCFF280LCC, ENCFF406NLL, ENCFF411YXB, ENCFF427YDU, ENCFF433QNW, ENCFF518TUP, ENCFF561CZI, ENCFF601JTS, ENCFF651HEM, ENCFF673GRZ, ENCFF687GPO, ENCFF696VQM, ENCFF711OYQ, ENCFF753HNF, ENCFF756QJD, ENCFF758IOS, ENCFF782CNW, ENCFF834TET, ENCFF840EFC, ENCFF847HFJ, ENCFF851JLX, ENCFF860SGX, ENCFF883APB, ENCFF885ZAO, ENCFF952EQQ, ENCFF953FGT, ENCFF008XVO, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF269AST, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF667KKO, ENCFF670VVN, ENCFF715CAJ, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF749STK, ENCFF827NYZ, ENCFF847LGC, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091689, DRR091691, DRR091696, DRR091698, SRR11428468, SRR11428470, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601 chr8 107661914 107661919 + Predicted LINE|L2|L2b ENSMUSG00000041308.7, Sntb2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR15198224, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr8 109311811 109311838 - Predicted DNA|hAT-Charlie|URR1B ENSMUSG00000110613.3, Lncbate1 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9080664, SRR9080666, SRR9178976, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178991 chr8 111171022 111171023 - Annotated LTR|ERVL-MaLR|ORR1G NR_168673.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198220, SRR15198225, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 112066646 112066658 - Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000012519.15, Mlkl DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR9178979, SRR9178982, SRR9178985, SRR9178989 chr8 114243914 114243915 + Annotated LTR|ERVL-MaLR|ORR1A2 NR_110476.1 chr8 115077532 115077533 - Predicted LTR|ERVK|RMER12C ENSMUSG00000084848.2, 4933408N05Rik DRR091688, DRR091691, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697199, SRR11428467, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198220, SRR9178976, SRR9178977, SRR9178978, SRR9178983, SRR9178984, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr8 11527897 11527930 + Annotated SINE|MIR|MIRc ENSMUSG00000096957.3, E230013L22Rik ENSMUST00000180408.3, ENSMUST00000242123.1, NR_126558.1 chr8 11530861 11530874 - Predicted LTR|ERVK|RMER17C ENSMUSG00000031504.7, Rab20 ENCFF067UCQ, ENCFF134HVE, ENCFF270ERO, ENCFF304DLW, ENCFF444YCN, ENCFF484HRX, ENCFF588DUN, ENCFF604SXL, ENCFF785TEQ, ENCFF840XYZ, ENCFF868WEJ, ENCFF920FVY, ENCFF483KXD, ENCFF483SQS, ENCFF160TQC, ENCFF199IWW, ENCFF344OJQ, ENCFF446LMP, ENCFF517DCU, ENCFF723MAR chr8 117526713 117526746 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000031758.11, Cdyl2 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080664, SRR9080665, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 117526945 117526946 - Predicted LTR|ERVL|MT2B ENSMUSG00000031758.11, Cdyl2 DRR091694, SRR11428470, SRR15198225 chr8 117804893 117804894 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000034416.19, Pkd1l2 SRR2089605, SRR2089630, SRR2089631, SRR2089632, SRR2089643 chr8 117830349 117830350 - Predicted LTR|ERVK|RMER6A ENSMUSG00000121084.1, ENSMUSG00000121084 SRR2089614, SRR2089634, SRR2089643 chr8 118398285 118398286 - Annotated SINE|MIR|MIRb ENSMUSG00000034308.14, Sdr42e1 ENSMUST00000037955.14, NM_028725.4 ENCFF199IWW chr8 118403947 118403948 - Annotated SINE|MIR|MIRc ENSMUSG00000110459.2, Gm31717 ENSMUST00000213044.2 chr8 118408802 118408803 + Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000110151.3, Gm38416 DRR091694, DRR091695, SRR15198219, SRR15198223, SRR15198227, SRR15198228, SRR2927111, SRR9178977 chr8 119633662 119633692 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000031841.20, Cdh13 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR6338004, SRR9080666, SRR9178981, SRR9178982, SRR9178985, SRR9178991 chr8 122559585 122559601 + Predicted LTR|ERV1|MMERGLN_LTR ENSMUSG00000110631.2, Gm42047 ENCFF002DND, ENCFF002FAA, ENCFF048IBL, ENCFF091WMS, ENCFF102BWR, ENCFF105KSL, ENCFF114PSQ, ENCFF130KZZ, ENCFF186RYS, ENCFF192NVI, ENCFF196PBF, ENCFF221JNS, ENCFF277XPM, ENCFF345OIF, ENCFF422ATU, ENCFF426QFT, ENCFF437AJW, ENCFF502ANK, ENCFF533CLY, ENCFF533NLR, ENCFF570GTP, ENCFF575RUC, ENCFF710DAI, ENCFF723QIC, ENCFF745HSV, ENCFF780TUN, ENCFF783MLO, ENCFF784LWT, ENCFF789LUC, ENCFF828WIK, ENCFF849GVQ, ENCFF858CTQ, ENCFF888LGA, ENCFF902GVX, ENCFF906FNQ, ENCFF931DDH, ENCFF941QCZ, ENCFF951MOU, ENCFF956WVJ, ENCFF970JWC, ENCFF970XZM, ENCFF002ZAX, ENCFF035BBA, ENCFF082OML, ENCFF090EUZ, ENCFF118YHP, ENCFF127DCC, ENCFF131VEF, ENCFF189BIW, ENCFF264PYB, ENCFF267VBU, ENCFF308WGP, ENCFF331YYO, ENCFF350PHR, ENCFF376PQU, ENCFF382VCK, ENCFF421DHQ, ENCFF430ERW, ENCFF497KLL, ENCFF518TUP, ENCFF536ZFC, ENCFF558UDY, ENCFF578YPJ, ENCFF594GIP, ENCFF598BFX, ENCFF657NUT, ENCFF661TOM, ENCFF685FUZ, ENCFF698WQO, ENCFF790WIY, ENCFF794GVC, ENCFF812QQI, ENCFF816CPX, ENCFF863LMG, ENCFF864DTX, ENCFF866IHG, ENCFF955YCX, ENCFF996WVL, DRR091694 chr8 122559785 122559869 + Predicted LTR|ERV1|MMERGLN_LTR ENSMUSG00000110631.2, Gm42047 ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAG, ENCFF056GXQ, ENCFF059IQN, ENCFF064PBF, ENCFF076CCZ, ENCFF082HKQ, ENCFF106RGV, ENCFF107XGE, ENCFF116MYR, ENCFF117BGT, ENCFF125HRQ, ENCFF138QRF, ENCFF139MHN, ENCFF147GLI, ENCFF151QHP, ENCFF159OVE, ENCFF189WYV, ENCFF198NQV, ENCFF205GJI, ENCFF206EGD, ENCFF207DLW, ENCFF210BCB, ENCFF212JFB, ENCFF212ZXS, ENCFF225MMR, ENCFF234MZC, ENCFF251TMY, ENCFF262URV, ENCFF262WAE, ENCFF264DCN, ENCFF284OMO, ENCFF297CWJ, ENCFF304MIZ, ENCFF326TQL, ENCFF330LWU, ENCFF347UAC, ENCFF349LIW, ENCFF351JWR, ENCFF363CYZ, ENCFF366BBB, ENCFF371VGE, ENCFF385GUJ, ENCFF392TDB, ENCFF400XLQ, ENCFF403ORF, ENCFF420RFN, ENCFF421SNO, ENCFF449MIK, ENCFF450WAV, ENCFF453XOG, ENCFF460NGS, ENCFF470MXU, ENCFF489VZI, ENCFF495YGN, ENCFF522VLI, ENCFF525POD, ENCFF527VIY, ENCFF535YBP, ENCFF540XSD, ENCFF565YHF, ENCFF581WWO, ENCFF585YYC, ENCFF589REP, ENCFF606EDP, ENCFF608NVM, ENCFF621PKT, ENCFF641QXI, ENCFF667FDW, ENCFF670CXH, ENCFF671ERF, ENCFF686EWL, ENCFF691URX, ENCFF698LQF, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF711WAC, ENCFF755IDE, ENCFF761RKP, ENCFF764ZUI, ENCFF771LLL, ENCFF787LWL, ENCFF793CWJ, ENCFF793STU, ENCFF823PZU, ENCFF865WQE, ENCFF868XLZ, ENCFF880FYC, ENCFF881TID, ENCFF881UBL, ENCFF883UYA, ENCFF884TJE, ENCFF896MQK, ENCFF907HVO, ENCFF912RLS, ENCFF913CFN, ENCFF914BRK, ENCFF915FID, ENCFF924VRI, ENCFF933UPG, ENCFF934ULS, ENCFF951UXE, ENCFF960LQP, ENCFF979WZO, ENCFF982BLT, ENCFF989HJD, ENCFF002SZY, ENCFF009AVK, ENCFF012HVN, ENCFF012KPC, ENCFF014CMK, ENCFF022ACG, ENCFF024CUG, ENCFF027QGO, ENCFF028XDY, ENCFF030IFE, ENCFF034WGV, ENCFF046HWP, ENCFF047LTH, ENCFF054EOL, ENCFF064VAD, ENCFF077CYB, ENCFF078CCF, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF116QKZ, ENCFF121IDD, ENCFF140WZW, ENCFF141YUD, ENCFF156XMZ, ENCFF157IFW, ENCFF167EHX, ENCFF169JOQ, ENCFF177SGB, ENCFF194DAO, ENCFF198XFF, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF222MKT, ENCFF223SMG, ENCFF235HER, ENCFF240OIM, ENCFF249LSC, ENCFF254VIN, ENCFF255XDN, ENCFF256UWN, ENCFF260UQJ, ENCFF261EQP, ENCFF267KZS, ENCFF272WGJ, ENCFF275HRX, ENCFF276OPJ, ENCFF279EVY, ENCFF296ITI, ENCFF297PPT, ENCFF299ENO, ENCFF301VMF, ENCFF303BIV, ENCFF313IFI, ENCFF315HBU, ENCFF341YZB, ENCFF344VGL, ENCFF346NGU, ENCFF357QTB, ENCFF369VAI, ENCFF370VOV, ENCFF378TYU, ENCFF387BVS, ENCFF399YLV, ENCFF403RPK, ENCFF417OEG, ENCFF429ZEH, ENCFF437QAE, ENCFF437ZSM, ENCFF439BEV, ENCFF456GLS, ENCFF460VXC, ENCFF477MBL, ENCFF478BEL, ENCFF478MHH, ENCFF482VRF, ENCFF486BJT, ENCFF497NJW, ENCFF498OHV, ENCFF505YPK, ENCFF507WIK, ENCFF513BRJ, ENCFF517BAY, ENCFF519AKK, ENCFF524PAV, ENCFF529LEZ, ENCFF531JWM, ENCFF537DSI, ENCFF543PXT, ENCFF549IDH, ENCFF549KAB, ENCFF552LXG, ENCFF559QXN, ENCFF562MVN, ENCFF565CON, ENCFF565FFU, ENCFF572SQL, ENCFF573WSG, ENCFF584ZUK, ENCFF591WVP, ENCFF595NMM, ENCFF598PMW, ENCFF601JTS, ENCFF611OFH, ENCFF637GVH, ENCFF640RWH, ENCFF644GYU, ENCFF661UPO, ENCFF673BPE, ENCFF678CRA, ENCFF680OWA, ENCFF685GDB, ENCFF696VQM, ENCFF699SBZ, ENCFF712BKP, ENCFF712EKU, ENCFF726YTS, ENCFF747VYT, ENCFF764AQK, ENCFF781XUM, ENCFF794MMU, ENCFF796TQV, ENCFF821HAZ, ENCFF829WND, ENCFF843WRN, ENCFF845NUY, ENCFF847IGW, ENCFF858OFI, ENCFF877VSZ, ENCFF885ZAO, ENCFF894COY, ENCFF899EJT, ENCFF903KDM, ENCFF917KUH, ENCFF926IDV, ENCFF930JCE, ENCFF931NMQ, ENCFF932XKS, ENCFF934QGX, ENCFF936LNA, ENCFF938CNS, ENCFF938XTE, ENCFF939QLN, ENCFF949QCF, ENCFF955WXI, ENCFF962ZCT, ENCFF985NHB, ENCFF994PPZ, ENCFF996AOW, SRR15198217, SRR15198221, SRR15198222, SRR15198225, SRR15198227, SRR15198228, SRR2927112 chr8 122560266 122560288 + Predicted LTR|ERV1|MMERGLN-int ENSMUSG00000110631.2, Gm42047 ENCFF002ERU, ENCFF022FSI, ENCFF672HUA, ENCFF006JHA, ENCFF088PZI, ENCFF098AYQ, ENCFF098TCZ, ENCFF118YHP, ENCFF149DFF, ENCFF156ZQH, ENCFF260BJB, ENCFF272VMY, ENCFF490ULA, ENCFF672WYO, ENCFF740WXS, ENCFF746ZCS, ENCFF759HJA, ENCFF825JNK, ENCFF834TET, SRR11428469, SRR11428470, SRR15198226 chr8 122560750 122560751 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000110631.2, Gm42047 ENCFF002DNB, ENCFF828WIK, ENCFF194DAO chr8 122561706 122561755 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000110631.2, Gm42047 ENCFF001NCP, ENCFF001NCR, ENCFF002DMZ, ENCFF005NBP, ENCFF040EEJ, ENCFF051PTY, ENCFF273CJD, ENCFF273TLO, ENCFF295SYY, ENCFF310HPH, ENCFF313ERY, ENCFF495SQR, ENCFF670CXH, ENCFF925ONP, ENCFF068KDU, ENCFF107YGR, ENCFF137OYQ, ENCFF167GWU, ENCFF175LCC, ENCFF177LXI, ENCFF185TRT, ENCFF192XJA, ENCFF255ESE, ENCFF286GUQ, ENCFF306FQJ, ENCFF328TJH, ENCFF357AGP, ENCFF366IEQ, ENCFF386HCR, ENCFF468RDR, ENCFF479WHZ, ENCFF483SQS, ENCFF643SBQ, ENCFF668SQN, ENCFF687STH, ENCFF694EPZ, ENCFF706BUS, ENCFF724VJN, ENCFF735BVR, ENCFF756QJD, ENCFF759WDO, ENCFF869MFM, ENCFF883APB, ENCFF900LFN, ENCFF935ZEM, ENCFF948YKH, ENCFF964HGL, ENCFF974XWJ, DRR091696 chr8 122562999 122563085 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000110631.2, Gm42047 ENCFF074HTO, ENCFF083CUR, ENCFF160HKC, ENCFF168WHQ, ENCFF221JIC, ENCFF229AIZ, ENCFF264RIV, ENCFF287KDR, ENCFF348VIH, ENCFF358UFZ, ENCFF401HCS, ENCFF494YXM, ENCFF552NWL, ENCFF645QUX, ENCFF771YNG, ENCFF876MJS, ENCFF884DLS, ENCFF994BOT, ENCFF912MUD, ENCFF008YSM, ENCFF045YRV, ENCFF080DNG, ENCFF136TYP, ENCFF162FTA, ENCFF174EGP, ENCFF197JAP, ENCFF207RVA, ENCFF219PCN, ENCFF233RGQ, ENCFF237JCE, ENCFF239RQP, ENCFF247VEN, ENCFF305GPD, ENCFF335UNU, ENCFF346UBA, ENCFF366CSN, ENCFF411YXB, ENCFF429ZEH, ENCFF453MPR, ENCFF454DOT, ENCFF464KYQ, ENCFF507VMW, ENCFF565DII, ENCFF588JAU, ENCFF597BNT, ENCFF618SIR, ENCFF658NHH, ENCFF673ZDG, ENCFF801SNQ, ENCFF818ZJQ, ENCFF840EFC, ENCFF847HFJ, ENCFF854LJN, ENCFF863ENS, ENCFF881YOK, ENCFF901KUE, ENCFF906CJJ, ENCFF948BDY, ENCFF958LRX, ENCFF970PLY, ENCFF976SMI, ENCFF994JUO, DRR091695, DRR091699 chr8 123789681 123789728 + Annotated LTR|ERVK|RLTR31D_MM ENSMUSG00000000738.19, Spg7 ENSMUST00000142541.8, ENSMUST00000125975.8 chr8 123899584 123899585 + Annotated LTR|ERVK|RLTR10D2 ENSMUSG00000110537.2, Gm4316 ENSMUST00000212490.2 SRR13142118, SRR13142119, SRR13142121, SRR13142122, SRR13142123, SRR15198218, SRR15198219, SRR15198223, SRR15198227, SRR9080662, SRR9080666 chr8 124259993 124259994 + Predicted LINE|L2|L2a ENSMUSG00000031967.16, ENSMUSG00000040220.11, Afg3l1, Gas8 ENCFF002DND, ENCFF002ERW, ENCFF221NAP, ENCFF372GOY, ENCFF502ANK, ENCFF840XYZ, ENCFF247VEN, SRR6904685 chr8 125083977 125083978 + Annotated LINE|L1|Lx5c ENSMUSG00000064664.4, Gm24459 ENSMUST00000082730.4 chr8 126456702 126456772 + Annotated LTR|ERVL-MaLR|MTEa ENSMUSG00000031851.15, Ntpcr ENSMUST00000146055.8, ENSMUST00000143504.8, ENSMUST00000151172.8 ENCFF001RTD, ENCFF001RTN, ENCFF002EZU, ENCFF007RPT, ENCFF090USB, ENCFF445BBH, ENCFF743QXJ, ENCFF996STG, ENCFF280LCC, ENCFF313IFI, ENCFF459TYQ, ENCFF780UQU, ENCFF983GRF, SRR11428470, SRR2927111 chr8 126686980 126687060 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000120218.1, ENSMUSG00000120218 ENSMUST00000242025.1, ENSMUST00000241948.1, ENSMUST00000243216.1, ENSMUST00000242118.1, ENSMUST00000245845.1, ENSMUST00000247148.1 ENCFF001NCP, ENCFF001NCR, ENCFF089PFT, ENCFF521IDK, ENCFF005GQR, ENCFF148XRK, ENCFF156YWS, ENCFF199IRM, ENCFF222GPK, ENCFF247QZW, ENCFF271OHB, ENCFF308FEA, ENCFF355AMN, ENCFF374YTS, ENCFF377UGQ, ENCFF394BDJ, ENCFF465BBM, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF510TTU, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF657FNE, ENCFF747XPP, ENCFF822PGJ, ENCFF831ISX, ENCFF854MWX, ENCFF886BRO, ENCFF914YDJ, ENCFF924LPZ, ENCFF962OCF, ENCFF075EMK, ENCFF119IHT, ENCFF525QIM, ENCFF670VVN, ENCFF803OIY, ENCFF932SOZ, ENCFF970VKL, DRR091690, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113 chr8 128306205 128306206 + Annotated LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000025812.19, Pard3 ENSMUST00000159940.2 chr8 129194829 129194830 + Predicted LINE|L2|AmnL2-1 ENSMUSG00000025810.10, Nrp1 ENCFF567AFB, ENCFF924LPZ, ENCFF229TCX, ENCFF689ZLL, SRR15198223 chr8 129850914 129850915 - Predicted LINE|L1|Lx2 ENSMUSG00000078840.2, Gm10999 SRR2089608, SRR2089610, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634 chr8 129852278 129852279 - Predicted LINE|L1|Lx2 ENSMUSG00000078840.2, Gm10999 SRR2089623, SRR2089632, SRR2089633, SRR2089644 chr8 129855750 129855751 - Predicted LINE|L1|Lx2 ENSMUSG00000078840.2, Gm10999 SRR2089608, SRR2089610, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089634, SRR2089646 chr8 13833934 13833960 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000031453.17, ENSMUSG00000109617.2, Rasa3, Gm7669 SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR9178977, SRR9178983, SRR9178986, SRR9178987, SRR9178988, SRR9178989 chr8 15659508 15659509 + Predicted LTR|ERVL-MaLR|MTE-int ENSMUSG00000110217.2, Gm45408 SRR2089632, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr8 19237595 19237641 + Predicted LINE|L1|Lx8 ENSMUSG00000046354.4, ENSMUSG00000059230.3, Defb14, Defb4 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, SRR10697195, SRR10697196, SRR10697197, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 20590479 20590480 + Predicted SINE|Alu|PB1D10 ENSMUSG00000110649.2, Gm40466 ENCFF033ZUH, ENCFF222GPK, ENCFF269SRJ, ENCFF510TTU, ENCFF694NRG, ENCFF854MWX chr8 23699315 23699316 - Predicted DNA|hAT-Charlie|RCHARR1 ENSMUSG00000031545.7, Gpat4 SRR10697196, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR15198217, SRR15198220, SRR2927111, SRR2927112, SRR9178983, SRR9178984, SRR9178992 chr8 23868250 23868257 + Predicted LTR|ERVL-MaLR|ORR1F ENSMUSG00000031548.8, Sfrp1 DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR15198217, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198227, SRR2040601, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178990, SRR9178992 chr8 26090919 26090920 + Predicted SINE|Alu|B1_Mm ENSMUSG00000054823.18, Nsd3 ENCFF001RTD, ENCFF056GXQ, ENCFF064PBF, ENCFF102AMK, ENCFF159OVE, ENCFF773VFS, ENCFF931DDH, ENCFF013HYW, ENCFF609ZVL, ENCFF945ICZ, ENCFF052RNG, ENCFF118YHP, ENCFF177LXI, ENCFF315HBU, ENCFF378TYU, ENCFF406NLL, ENCFF497KLL, ENCFF698WQO, ENCFF949QCF, ENCFF186VNL, ENCFF442OKF, ENCFF494ZWE, ENCFF582WGH, ENCFF653QJY, SRR15198222, SRR15198224 chr8 26337695 26337724 - Annotated LTR|ERVK|RLTR12C ENSMUSG00000031575.19, Ash2l ENSMUST00000110610.8, NM_001080793.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF001RTJ, ENCFF002ERU, ENCFF089PFT, ENCFF437AJW, ENCFF489IGD, ENCFF521IDK, ENCFF696TCH, ENCFF874ELO, ENCFF383AJS, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643192, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 26354469 26354470 + Predicted LINE|L1|Lx8 ENSMUSG00000031576.17, Kcnu1 SRR2089614, SRR2089620, SRR2089629, SRR2089630, SRR2089635 chr8 26391244 26391245 + Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000031576.17, Kcnu1 SRR2089608, SRR2089615, SRR2089644, SRR2089646 chr8 26462985 26462986 - Predicted DNA|TcMar-Tigger|X26_DNA ENSMUSG00000037260.9, Hgsnat ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF051JGE, ENCFF102BWR, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF993QUE, ENCFF640RWH, ENCFF671TUD chr8 26575028 26575031 + Predicted LINE|L1|Lx8 ENSMUSG00000013878.19, Rnf170 DRR091689, DRR091692, DRR091693, DRR091694, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR15198218, SRR15198224, SRR2040601, SRR2927113, SRR9178981, SRR9178985 chr8 26577041 26577042 + Predicted LINE|L1|Lx7 ENSMUSG00000013878.19, ENSMUSG00000085437.9, Rnf170, 1700047A11Rik SRR10697195, SRR10697197, SRR11428469, SRR3178205, SRR9178976, SRR9178979, SRR9178985 chr8 27250588 27250589 - Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000109689.2, Gm45646 ENSMUST00000210983.2 SRR2040601, SRR9080666, SRR9178982 chr8 27713851 27713863 - Annotated LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000039720.8, Got1l1 ENSMUST00000211002.2, ENSMUST00000209299.2 ENCFF001NDA, ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR6338004, SRR9080664 chr8 29047359 29047360 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000110322.2, Gm8110 SRR2089616, SRR2089617, SRR2089618, SRR2089630, SRR2089651 chr8 3309039 3309040 + Predicted SINE|B4|B4 ENSMUSG00000086065.2, Gm16180 DRR091688, DRR091689, DRR091690, DRR091691, DRR091693, DRR091695, DRR091697, DRR091698, SRR2040601, SRR2927113, SRR9178978, SRR9178979, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 33739112 33739113 - Predicted LTR|ERVK|RMER17D2 ENSMUSG00000031583.14, Wrn ENCFF002DMZ, ENCFF002EZW, ENCFF089WMB, ENCFF143PHU, ENCFF221NAP, ENCFF452AXW, ENCFF502ANK, ENCFF885AJK, ENCFF888LGA, ENCFF197OUM, ENCFF407JTK, ENCFF512LAN, ENCFF538AIM, ENCFF689ZLL, ENCFF816CPX, ENCFF958BIE, ENCFF454JTI chr8 34475942 34475943 + Annotated LTR|ERVL-MaLR|MLT1H1 ENSMUSG00000110663.2, Gm39157 ENSMUST00000212322.2 ENCFF001RTD, ENCFF001RTN, SRR15198217 chr8 34683947 34683993 + Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000100605.3, Gm29243 ENSMUST00000188318.3, ENSMUST00000245519.1, ENSMUST00000245583.1, NR_166073.1 ENCFF001NDD, ENCFF089PFT, ENCFF671TUD, DRR091689, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, SRR13142118, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chr8 34990467 34990481 + Annotated LTR|ERVL-MaLR|MLT1F2 ENSMUSG00000110015.2, Gm33968 ENSMUST00000211015.2 DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR2927112, SRR2927113, SRR6338004, SRR6904685, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178992 chr8 35562511 35562518 + Predicted LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000110130.2, Gm34419 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697199, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927113, SRR9080664, SRR9178981, SRR9178985 chr8 36190804 36190824 + Annotated LTR|ERVK|RLTR42 ENSMUSG00000109714.3, Gm35021 ENSMUST00000245802.1, ENSMUST00000211555.3, ENSMUST00000246031.1 chr8 3710978 3710979 - Annotated Retroposon|L1-dep|RMER1B ENSMUSG00000108859.2, Gm44776 ENSMUST00000207212.2 chr8 3720527 3720528 - Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000121099.1, ENSMUSG00000121099 ENSMUST00000247125.1 chr8 3740860 3740861 - Annotated DNA|hAT-Ac|OldhAT1 ENSMUSG00000005540.11, Fcer2a ENSMUST00000208492.2, NM_001253737.1, NM_001253746.1, NM_001253745.1 chr8 3741162 3741163 - Annotated LINE|CR1|L3 ENSMUSG00000005540.11, Fcer2a ENSMUST00000207463.2 ENCFF538AIM chr8 3759804 3759805 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000089956.2, Gm16553 ENSMUST00000160490.2 ENCFF359GCY, ENCFF062GNP, ENCFF248ELC, ENCFF260KJY, ENCFF349AIG, ENCFF442OKF, ENCFF653QJY chr8 39753905 39753906 + Annotated Retroposon|L1-dep|RMER1A ENSMUSG00000109827.3, Gm6213 ENSMUST00000244664.1 chr8 40968875 40968888 - Annotated SINE|Alu|PB1D9 ENSMUSG00000031601.17, Cnot7 ENSMUST00000132032.8, ENSMUST00000128237.2, NM_001271542.1 chr8 41490830 41490843 + Predicted LINE|L2|L2b ENSMUSG00000086773.2, Gm16192 SRR2089614, SRR2089617, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr8 41671173 41671178 + Annotated SINE|B4|ID_B1 ENSMUSG00000085445.2, Gm16348 ENSMUST00000146654.2, ENSMUST00000142897.2, NR_166597.1, NR_166596.1 ENCFF001RTN chr8 42349016 42349018 + Predicted LINE|L1|L1MdGf_I ENSMUSG00000102046.2, 2810404M03Rik SRR2089603, SRR2089606, SRR2089607, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089640, SRR2089641, SRR2089643, SRR2089645, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr8 42350008 42350009 + Predicted LINE|L1|L1MdGf_I ENSMUSG00000102046.2, 2810404M03Rik SRR2089612, SRR2089637, SRR2089648 chr8 42355517 42355518 + Predicted SINE|B2|B3 ENSMUSG00000102046.2, 2810404M03Rik SRR2089615, SRR2089620, SRR2089633, SRR2089649 chr8 42395084 42395086 + Predicted LINE|L1|L1Lx_I ENSMUSG00000102046.2, 2810404M03Rik SRR2089614, SRR2089617, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089637, SRR2089638, SRR2089640, SRR2089641, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr8 42398713 42398714 + Predicted LINE|L1|L1Lx_I ENSMUSG00000102046.2, 2810404M03Rik SRR2089615, SRR2089616, SRR2089618, SRR2089620, SRR2089621, SRR2089630, SRR2089633, SRR2089636, SRR2089643, SRR2089646, SRR2089651 chr8 43981144 43981177 - Predicted DNA|hAT-Tip100|hAT-4b_Ther ENSMUSG00000063900.6, Adam26b NM_001009547.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR5643190, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 44029715 44029738 - Predicted DNA|hAT-Tip100|hAT-4b_Ther ENSMUSG00000048516.3, ENSMUSG00000079058.4, Adam26a, Adam34 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643199, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 46049453 46049454 - Predicted LTR|ERVL-MaLR|MTE2b ENSMUSG00000084954.3, Gm16351 SRR11428467, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR5643199, SRR6338004, SRR6904684, SRR6904685 chr8 46369905 46369906 + Predicted LINE|L1|L1MB4 ENSMUSG00000031636.8, Pdlim3 ENCFF236TUH, ENCFF304DLW, ENCFF390NKP, ENCFF467LJD, ENCFF592GVA, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF868WEJ, ENCFF199IWW, ENCFF423TSB, ENCFF641WPY chr8 46816288 46816294 + Annotated LINE|L1|L1MB4 ENSMUSG00000110035.2, Gm30931 ENSMUST00000211698.2, ENSMUST00000210605.2 ENCFF001RTD chr8 47224100 47224101 - Predicted LINE|L1|L1MC4 ENSMUSG00000110374.2, Gm31172 DRR091698, SRR15198217, SRR15198220, SRR15198222, SRR15198226, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178979, SRR9178982, SRR9178985 chr8 4732803 4732804 - Predicted LTR|ERVK|MMERVK10C-int ENSMUSG00000048484.5, Gm7461 DRR091693, DRR091696, SRR15198217, SRR15198221 chr8 48462131 48462168 - Annotated DNA|hAT-Charlie|RCHARR1 ENSMUSG00000110624.2, Gm32052 ENSMUST00000212073.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 50272148 50272162 + Predicted LINE|L1|Lx8b ENSMUSG00000109907.2, Gm45321 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr8 50970676 50970715 - Annotated LINE|L1|Lx8 ENSMUSG00000109741.2, Gm45455 ENSMUST00000209514.2, ENSMUST00000211156.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904685, SRR9080662, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 51116590 51116591 - Predicted LINE|L1|Lx10 ENSMUSG00000109838.2, Gm45341 DRR091688, DRR091690, DRR091691, DRR091693, DRR091694, DRR091697, DRR091698, SRR11428467, SRR11428470, SRR13142120, SRR15198217, SRR15198221, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113 chr8 52533440 52533441 + Annotated LINE|L1|Lx5c ENSMUSG00000109823.2, Gm45388 ENSMUST00000209922.2 SRR10697201, SRR13142121, SRR13142122, SRR13142123 chr8 53889136 53889137 + Predicted LTR|ERV1|RLTR41 ENSMUSG00000110362.2, Gm45554 ENSMUST00000210964.2 DRR091688, DRR091693, SRR10697200, SRR15198217, SRR15198219, SRR15198220, SRR2040601, SRR2927113, SRR9178977, SRR9178978, SRR9178979, SRR9178987, SRR9178989, SRR9178991 chr8 57341908 57341933 - Annotated LINE|L1|L1MA9 ENSMUSG00000110000.2, Gm33501 ENSMUST00000209257.2, ENSMUST00000209983.2 DRR091688, DRR091689, DRR091693, DRR091694, DRR091695, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113, SRR9178977, SRR9178978, SRR9178979, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 57958878 57958879 + Predicted LTR|ERVL-MaLR|ORR1A0 ENSMUSG00000096917.4, 2500002B13Rik ENCFF102BWR, ENCFF181RDS, ENCFF198RBJ, ENCFF452AXW, ENCFF575RUC, ENCFF793IYH, ENCFF993QUE, ENCFF234LUQ, ENCFF345BBC, ENCFF455DHP, ENCFF609ZVL, ENCFF477YHR chr8 58249615 58249640 - Annotated SINE|B4|B4 ENSMUSG00000096914.4, Galntl6 ENSMUST00000204067.3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 58976328 58976329 + Annotated LINE|L1|L1_Mur3 ENSMUSG00000090003.2, Gm15882 ENSMUST00000161344.2 chr8 59872340 59872344 + Annotated LTR|ERVK|RMER17B2 ENSMUSG00000110381.2, Gm34370 ENSMUST00000209385.2 DRR091688, DRR091693, SRR10697203, SRR11428467, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198222, SRR15198224, SRR15198228, SRR2040601, SRR2927113 chr8 60278683 60278696 + Annotated LINE|L1|Lx9 ENSMUSG00000110406.2, 4930470O06Rik ENSMUST00000209438.2, NR_126087.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 61418412 61418413 - Predicted LTR|ERVL-MaLR|MLT1D ENSMUSG00000004319.16, Clcn3 ENCFF067UCQ, ENCFF134HVE, ENCFF236TUH, ENCFF390NKP, ENCFF467LJD, ENCFF484HRX, ENCFF643XFK, ENCFF686KMX, ENCFF714CKE, ENCFF803VZZ, ENCFF804UQS, ENCFF855FCX, ENCFF978EQI, ENCFF723MAR, ENCFF888IIL chr8 61418542 61418543 - Predicted LTR|ERVL-MaLR|MLT1D ENSMUSG00000004319.16, Clcn3 ENCFF067UCQ, ENCFF134HVE, ENCFF151YNV, ENCFF304DLW, ENCFF390NKP, ENCFF391UFN, ENCFF429BQZ, ENCFF467LJD, ENCFF484HRX, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF596QWT, ENCFF642YTY, ENCFF643XFK, ENCFF657UWH, ENCFF686KMX, ENCFF714CKE, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF840XYZ, ENCFF978EQI, ENCFF160TQC, ENCFF199IWW, ENCFF254YNR, ENCFF423TSB, ENCFF592WZB, ENCFF641WPY, ENCFF705HQV, ENCFF733LFV, ENCFF888IIL chr8 63168797 63168798 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000110364.2, Gm45462 SRR2089637, SRR2089648, SRR2089649, SRR2089650 chr8 70072322 70072323 - Predicted LTR|ERVL|MT2A ENSMUSG00000060427.16, Zfp868 ENCFF002ERW, ENCFF089WMB, ENCFF426QFT, ENCFF437AJW, ENCFF489IGD, ENCFF874ELO, ENCFF838YLT, ENCFF952LUC, SRR9080666 chr8 70163634 70163635 - Predicted LTR|ERVL|MT2A ENSMUSG00000054648.9, Zfp869 ENCFF002ERW, ENCFF002FAA, ENCFF048FGD, ENCFF075MGH, ENCFF089WMB, ENCFF143PHU, ENCFF168WHQ, ENCFF221NAP, ENCFF225MMR, ENCFF502ANK, ENCFF585YYC, ENCFF888LGA, ENCFF009AON, ENCFF049SEE, ENCFF766UJI chr8 70583443 70583520 + Predicted SINE|B2|B3 ENSMUSG00000071078.7, Nr2c2ap ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001RTD, ENCFF001RTF, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF022FSI, ENCFF064PBF, ENCFF102BWR, ENCFF116MYR, ENCFF121OLG, ENCFF214IUN, ENCFF225MMR, ENCFF264DCN, ENCFF297BEX, ENCFF305IXM, ENCFF331WKS, ENCFF345OIF, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF470MXU, ENCFF564OKH, ENCFF922KQY, ENCFF993QUE, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF027RRZ, ENCFF052WUB, ENCFF065LOT, ENCFF067UCQ, ENCFF101BDM, ENCFF134HVE, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF173IVH, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF326UXM, ENCFF335ZSA, ENCFF355AMN, ENCFF359GCY, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF390NKP, ENCFF408NBX, ENCFF429BQZ, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF516BTG, ENCFF519YGA, ENCFF532UKS, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF657UWH, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF712DGP, ENCFF721ASG, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF829RHM, ENCFF831ISX, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF924LPZ, ENCFF933KQV, ENCFF935LAF, ENCFF939IUH, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF057FFG, ENCFF243TPB, ENCFF278JAU, ENCFF296UDD, ENCFF321NRW, ENCFF387BVS, ENCFF390ZZH, ENCFF406NLL, ENCFF429ZEH, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF541HSQ, ENCFF633QXI, ENCFF705CES, ENCFF806XNV, ENCFF952LUC, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF160TQC, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF349AIG, ENCFF361MLD, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF477YHR, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF574YMK, ENCFF582WGH, ENCFF641WPY, ENCFF653QJY, ENCFF670VVN, ENCFF671TUD, ENCFF716YKR, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF827NYZ, ENCFF847LGC, ENCFF854IBU, ENCFF904RJF, ENCFF906OAF, ENCFF932SOZ, DRR091688, DRR091692, DRR091693, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697198, SRR10697201, SRR10697203, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR9080665 chr8 70598462 70598463 + Predicted LINE|L2|L2c ENSMUSG00000079033.11, Mef2b ENCFF221NAP, ENCFF308WGP, ENCFF689ZLL, SRR6904683, SRR6904685 chr8 70959343 70959531 - Annotated SINE|Alu|PB1D9 ENSMUSG00000058833.12, Rex1bd ENSMUST00000135773.8, ENSMUST00000075175.12, ENSMUST00000136913.2, ENSMUST00000132107.2, ENSMUST00000128620.2, NM_025577.3, NM_001357209.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002DNB, ENCFF002DND, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF059IQN, ENCFF064PBF, ENCFF074HTO, ENCFF084PUC, ENCFF089PFT, ENCFF090USB, ENCFF091WMS, ENCFF094CCP, ENCFF102BWR, ENCFF104LLO, ENCFF115KZV, ENCFF116MYR, ENCFF119KNP, ENCFF121BYS, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF138QRF, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF163LPQ, ENCFF178PMH, ENCFF178ZVU, ENCFF179WPT, ENCFF181RDS, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF205GJI, ENCFF207OVG, ENCFF210BCB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF225MMR, ENCFF227OTT, ENCFF261OTH, ENCFF262URV, ENCFF264DCN, ENCFF274WSX, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF310HPH, ENCFF326TQL, ENCFF331WKS, ENCFF344ILW, ENCFF344LNZ, ENCFF345OIF, ENCFF351JWR, ENCFF363CYZ, ENCFF371VGE, ENCFF375EMG, ENCFF381JXP, ENCFF390QUP, ENCFF392TDB, ENCFF393YET, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF426QFT, ENCFF437AJW, ENCFF445BBH, ENCFF449MIK, ENCFF450WAV, ENCFF470MXU, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489IGD, ENCFF495YGN, ENCFF502ANK, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF521IDK, ENCFF527VIY, ENCFF528CBF, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF564OKH, ENCFF564YPB, ENCFF589REP, ENCFF590NVM, ENCFF593RAV, ENCFF595GFM, ENCFF623BKO, ENCFF625JLB, ENCFF670CXH, ENCFF683RFI, ENCFF696TCH, ENCFF711WAC, ENCFF725RXU, ENCFF743QXJ, ENCFF755FCM, ENCFF761RKP, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793IYH, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813GGJ, ENCFF813ZJI, ENCFF828WIK, ENCFF841OXD, ENCFF849GVQ, ENCFF851ESH, ENCFF852ZDB, ENCFF865WQE, ENCFF874ELO, ENCFF878SQO, ENCFF880FYC, ENCFF886XAI, ENCFF888HEF, ENCFF912RLS, ENCFF915FID, ENCFF922KQY, ENCFF931PFF, ENCFF933UPG, ENCFF934ZAP, ENCFF935XRF, ENCFF937GBW, ENCFF951MOU, ENCFF989HJD, ENCFF991TPB, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF013HYW, ENCFF017LOD, ENCFF023MKT, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF084CWD, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF170XMM, ENCFF173IVH, ENCFF195JLT, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF223BXU, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF269SRJ, ENCFF269WEZ, ENCFF270ERO, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF345BBC, ENCFF348FTH, ENCFF355AMN, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF379TZT, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF533DWD, ENCFF567AFB, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF596QWT, ENCFF604SXL, ENCFF608LAL, ENCFF609KQB, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF809FPA, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF829RHM, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF862FYE, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF969WLB, ENCFF970VKB, ENCFF975NCY, ENCFF978EQI, ENCFF002SZY, ENCFF004AEL, ENCFF009AON, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF033DWC, ENCFF037GFB, ENCFF037IZV, ENCFF041PJP, ENCFF046HWP, ENCFF049SEE, ENCFF050CMF, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF061WTN, ENCFF065ZIE, ENCFF070YMI, ENCFF073RJJ, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF088SVK, ENCFF094RHV, ENCFF103SQR, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF126WDH, ENCFF128CYW, ENCFF131VEF, ENCFF133KGZ, ENCFF150HVU, ENCFF156XMZ, ENCFF156ZQH, ENCFF157IFW, ENCFF158HQO, ENCFF163DKN, ENCFF170KWW, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF187BHR, ENCFF189BIW, ENCFF194DAO, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF235HER, ENCFF243LBQ, ENCFF243TPB, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF275HRX, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF306OWL, ENCFF313IFI, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF332IRR, ENCFF338LFG, ENCFF341YZB, ENCFF343MIX, ENCFF344VGL, ENCFF346HDC, ENCFF348RRM, ENCFF352KGC, ENCFF357QTB, ENCFF359DNK, ENCFF369VAI, ENCFF380BYT, ENCFF380LXU, ENCFF387BVS, ENCFF390AUP, ENCFF390ZZH, ENCFF397MUI, ENCFF406LFV, ENCFF408FFP, ENCFF411KCB, ENCFF417OEG, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF430ERW, ENCFF458EUS, ENCFF459TYQ, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF487OHM, ENCFF490ULA, ENCFF492HRC, ENCFF497GLK, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF530DUT, ENCFF536ZVF, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF548JDU, ENCFF552KEA, ENCFF563FUC, ENCFF566HCI, ENCFF569ELL, ENCFF576EOD, ENCFF578PSU, ENCFF581RIR, ENCFF584OOK, ENCFF594GIP, ENCFF596INO, ENCFF598LJF, ENCFF598WAL, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF627XGF, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF644GYU, ENCFF656DRS, ENCFF673GRZ, ENCFF680WIN, ENCFF689RQK, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF698WQO, ENCFF707HQI, ENCFF712BKP, ENCFF713JXV, ENCFF716NXU, ENCFF723QWN, ENCFF727EPG, ENCFF727JTZ, ENCFF737VKP, ENCFF743NNG, ENCFF747VYT, ENCFF749XRU, ENCFF751QWY, ENCFF765UBL, ENCFF766UJI, ENCFF769FVU, ENCFF780UQU, ENCFF801SNQ, ENCFF806XNV, ENCFF809QBQ, ENCFF811ZQO, ENCFF819JGD, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF855UFX, ENCFF860SGX, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877SON, ENCFF877VSZ, ENCFF886UAF, ENCFF898CAY, ENCFF900AIQ, ENCFF921PGH, ENCFF926FRX, ENCFF934VFW, ENCFF938XTE, ENCFF952LUC, ENCFF953POL, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF958BIE, ENCFF959CWA, ENCFF960QTC, ENCFF966VVA, ENCFF970LRH, ENCFF970WCD, ENCFF983GRF, ENCFF994PPZ, ENCFF999ZYF, ENCFF008XVO, ENCFF014SLC, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF178HDG, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF269AST, ENCFF277QHC, ENCFF302TQH, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF349AIG, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF477YHR, ENCFF481CFU, ENCFF499GDC, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF653QJY, ENCFF667KKO, ENCFF670VVN, ENCFF671TUD, ENCFF705HQV, ENCFF715CAJ, ENCFF716YKR, ENCFF720MPJ, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF847LGC, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF932SOZ, ENCFF970VKL, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643200, SRR6338004, SRR9080662, SRR9080663, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr8 70965404 70965405 - Predicted SINE|Alu|B1_Mm ENSMUSG00000055553.17, Kxd1 ENCFF533DWD, ENCFF269AST, ENCFF525QIM, ENCFF932SOZ, SRR9080665 chr8 72707291 72707292 + Annotated LTR|ERV1|LTRIS2 ENSMUSG00000052446.18, Zfp961 ENSMUST00000151168.2 ENCFF001NDD chr8 73673242 73673243 - Predicted LINE|L1|L1MdMus_I ENSMUSG00000004383.19, Large1 SRR2089606, SRR2089610, SRR2089630, SRR2089631, SRR2089632, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089640, SRR2089647, SRR2089648, SRR2089651 chr8 78230580 78230587 - Predicted LINE|L1|Lx8 ENSMUSG00000037148.9, Arhgap10 DRR091693, SRR10697197, SRR10697200, SRR11428467, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178986, SRR9178988 chr8 78324609 78324610 - Predicted LTR|ERVK|SRV_MM-int ENSMUSG00000031617.17, Tmem184c ENCFF002FAC, ENCFF048FGD, ENCFF198RBJ, ENCFF906FNQ, ENCFF661UPO, ENCFF667RGF, SRR3178203, SRR3178204, SRR3178205 chr8 78325282 78325283 - Predicted LTR|ERVK|SRV_MM-int ENSMUSG00000031617.17, Tmem184c ENCFF002DMZ, ENCFF054EOL, ENCFF062GNP, SRR3178203, SRR3178205, SRR3178206 chr8 78326398 78326399 - Predicted LTR|ERVK|SRV_MM-int ENSMUSG00000031617.17, Tmem184c ENCFF002ERU, ENCFF002FAA, ENCFF051JGE, ENCFF502ANK, ENCFF844KCR, ENCFF888LGA, ENCFF917RNE, ENCFF991TPB, ENCFF009AVK, ENCFF060FGD, ENCFF197OUM, ENCFF239RQP, ENCFF302KQL, ENCFF407JTK, ENCFF611QZE, ENCFF644EGG, ENCFF726YTS chr8 78944495 78944536 + Predicted LTR|ERVL-MaLR|MLT1G3 ENSMUSG00000037101.17, Ttc29 ENCFF002FAG, SRR3178203, SRR3178204, SRR3178205, SRR5643191, SRR6904683, SRR6904684, SRR6904685 chr8 79117576 79117612 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000037101.17, Ttc29 ENSMUST00000124713.2 ENCFF001NDA, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643190, SRR5643192, SRR6338004, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 81239622 81239630 - Predicted LTR|ERV1|RodERV21-int ENSMUSG00000086912.4, 4930505O20Rik DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697197, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR15198218, SRR15198221, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR5643190, SRR9178981, SRR9178982, SRR9178985, SRR9178989, SRR9178990 chr8 84323898 84323899 - Predicted LTR|ERVK|RMER12C ENSMUSG00000031708.18, Tecr ENCFF236TUH, ENCFF377LAC, ENCFF855FCX, ENCFF160TQC, ENCFF423TSB chr8 84420668 84420808 - Annotated SINE|Alu|B1_Mur1 ENSMUSG00000057672.17, Pkn1 ENSMUST00000144258.8, NM_001199593.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTF, ENCFF001RTJ, ENCFF002ERW, ENCFF002FAG, ENCFF007RPT, ENCFF022FSI, ENCFF027BYX, ENCFF027IIP, ENCFF043JGD, ENCFF048IBL, ENCFF051JSS, ENCFF051PTY, ENCFF056GXQ, ENCFF059IQN, ENCFF074HTO, ENCFF083CUR, ENCFF090USB, ENCFF094CCP, ENCFF102AMK, ENCFF108UNS, ENCFF115KZV, ENCFF116MYR, ENCFF117BGT, ENCFF119KNP, ENCFF121BYS, ENCFF125HRQ, ENCFF126HTW, ENCFF130KZZ, ENCFF139MHN, ENCFF140VGY, ENCFF142CUS, ENCFF159OVE, ENCFF162UVS, ENCFF163LPQ, ENCFF178PMH, ENCFF184EAT, ENCFF186RYS, ENCFF189WYV, ENCFF198NQV, ENCFF198RBJ, ENCFF205GJI, ENCFF207DLW, ENCFF207OVG, ENCFF212JFB, ENCFF212ZXS, ENCFF214IUN, ENCFF218HNK, ENCFF225MMR, ENCFF227OTT, ENCFF229AIZ, ENCFF261OTH, ENCFF262WAE, ENCFF273CJD, ENCFF274WSX, ENCFF279BVM, ENCFF289WHW, ENCFF291LRG, ENCFF296ASE, ENCFF297BEX, ENCFF297CWJ, ENCFF305IXM, ENCFF310HPH, ENCFF321BMO, ENCFF326TQL, ENCFF330IYN, ENCFF331WKS, ENCFF332ZPO, ENCFF344LNZ, ENCFF347HAB, ENCFF348VIH, ENCFF349LIW, ENCFF351JWR, ENCFF358UFZ, ENCFF363XWU, ENCFF371VGE, ENCFF372GOY, ENCFF375EMG, ENCFF385GUJ, ENCFF390QUP, ENCFF393UZV, ENCFF404PYQ, ENCFF415KCJ, ENCFF420RFN, ENCFF421SNO, ENCFF432ZLQ, ENCFF439OFV, ENCFF445BBH, ENCFF449MIK, ENCFF453XOG, ENCFF470MXU, ENCFF472YPG, ENCFF478FDA, ENCFF480BVV, ENCFF482MUH, ENCFF489VZI, ENCFF491XRO, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF514JOV, ENCFF522VLI, ENCFF525POD, ENCFF527VIY, ENCFF528CBF, ENCFF533JUU, ENCFF534DID, ENCFF548SLN, ENCFF564OKH, ENCFF564YPB, ENCFF589MBR, ENCFF589REP, ENCFF595GFM, ENCFF600AGS, ENCFF605IFN, ENCFF623BKO, ENCFF625JLB, ENCFF641QXI, ENCFF654BXL, ENCFF667FDW, ENCFF670CXH, ENCFF670YKO, ENCFF683RFI, ENCFF711WAC, ENCFF734FHF, ENCFF743QXJ, ENCFF743RQJ, ENCFF755FCM, ENCFF755IDE, ENCFF761RKP, ENCFF771YNG, ENCFF775BPV, ENCFF775RSS, ENCFF782JNB, ENCFF793CWJ, ENCFF793STU, ENCFF796NHQ, ENCFF802GAN, ENCFF808XFI, ENCFF813ZJI, ENCFF823PZU, ENCFF828WIK, ENCFF841OXD, ENCFF844KCR, ENCFF844QDN, ENCFF851ESH, ENCFF852ZDB, ENCFF858CTQ, ENCFF865WQE, ENCFF874ELO, ENCFF878SQO, ENCFF880FYC, ENCFF883UYA, ENCFF884DLS, ENCFF886XAI, ENCFF888HEF, ENCFF915FID, ENCFF922KQY, ENCFF931HCN, ENCFF931PFF, ENCFF934ZAP, ENCFF951MOU, ENCFF960LQP, ENCFF985BLV, ENCFF993QUE, ENCFF994BOT, ENCFF996STG, ENCFF004AEL, ENCFF009AON, ENCFF012HVN, ENCFF015JJB, ENCFF022ACG, ENCFF023TPS, ENCFF027GBM, ENCFF033DWC, ENCFF034WGV, ENCFF035BBA, ENCFF037IZV, ENCFF037LEJ, ENCFF041PJP, ENCFF049WBL, ENCFF050CMF, ENCFF053NFR, ENCFF055PZZ, ENCFF056UGH, ENCFF057MDU, ENCFF060FGD, ENCFF061WTN, ENCFF064VAD, ENCFF065ZIE, ENCFF067OYG, ENCFF068CQU, ENCFF070YMI, ENCFF073RJJ, ENCFF077YZF, ENCFF080BTV, ENCFF080DNG, ENCFF080REY, ENCFF082BJV, ENCFF083IRL, ENCFF085RPW, ENCFF087IUJ, ENCFF089SWU, ENCFF094RHV, ENCFF106GHS, ENCFF111MWQ, ENCFF116QKZ, ENCFF118YHP, ENCFF120SMK, ENCFF124SSE, ENCFF126WDH, ENCFF131VEF, ENCFF137OYQ, ENCFF149DFF, ENCFF150HVU, ENCFF156XMZ, ENCFF157IFW, ENCFF158HQO, ENCFF166UTY, ENCFF167EHX, ENCFF170KWW, ENCFF177SGB, ENCFF178ZXW, ENCFF184ALY, ENCFF187BHR, ENCFF189BIW, ENCFF189JVE, ENCFF197JAP, ENCFF198XFF, ENCFF199AAD, ENCFF207HZS, ENCFF220GKL, ENCFF223SMG, ENCFF229TCX, ENCFF235HER, ENCFF237JCE, ENCFF243LBQ, ENCFF243TPB, ENCFF256UWN, ENCFF258WLS, ENCFF267KZS, ENCFF268ZHE, ENCFF272WGJ, ENCFF275HRX, ENCFF278JAU, ENCFF279EVY, ENCFF280LCC, ENCFF285NFL, ENCFF286GUQ, ENCFF286RSE, ENCFF291SCS, ENCFF296UDD, ENCFF299ENO, ENCFF302MXO, ENCFF306FQJ, ENCFF315OFF, ENCFF316EEH, ENCFF320CXH, ENCFF321NRW, ENCFF324ITL, ENCFF332IRR, ENCFF332RWQ, ENCFF341YZB, ENCFF343MIX, ENCFF348RRM, ENCFF350PHR, ENCFF352KGC, ENCFF353SEU, ENCFF357QTB, ENCFF369VAI, ENCFF374VAZ, ENCFF377OQI, ENCFF380BYT, ENCFF380LXU, ENCFF382VCK, ENCFF390AUP, ENCFF390ZZH, ENCFF394AUR, ENCFF397MUI, ENCFF397ZQU, ENCFF403CRC, ENCFF403RPK, ENCFF406LFV, ENCFF408FFP, ENCFF411KCB, ENCFF411YXB, ENCFF417INY, ENCFF417OEG, ENCFF422CQE, ENCFF424GQM, ENCFF426ETE, ENCFF426FAF, ENCFF429TQT, ENCFF430ERW, ENCFF440IAL, ENCFF450CUC, ENCFF453MPR, ENCFF458EUS, ENCFF460FON, ENCFF468RDR, ENCFF469JWF, ENCFF476JSK, ENCFF478BEL, ENCFF478YRJ, ENCFF482VRF, ENCFF483KXD, ENCFF483SQS, ENCFF484PQK, ENCFF487OHM, ENCFF490ULA, ENCFF504PGI, ENCFF505PJK, ENCFF505WKA, ENCFF512XKX, ENCFF517EJZ, ENCFF519AKK, ENCFF530DUT, ENCFF536ZVF, ENCFF538TFM, ENCFF538ZTW, ENCFF543GNI, ENCFF543PXT, ENCFF548JDU, ENCFF549KAB, ENCFF565CON, ENCFF565DII, ENCFF565FFU, ENCFF566HCI, ENCFF569ELL, ENCFF578PSU, ENCFF581RIR, ENCFF581ZWM, ENCFF584OOK, ENCFF588JAU, ENCFF593TQB, ENCFF596INO, ENCFF596PMK, ENCFF598LJF, ENCFF598PMW, ENCFF598WAL, ENCFF601JTS, ENCFF606XHA, ENCFF609WDV, ENCFF609WRW, ENCFF611OFH, ENCFF613YNK, ENCFF614WCH, ENCFF618SIR, ENCFF619SKV, ENCFF633QXI, ENCFF637CVI, ENCFF637PIP, ENCFF644GYU, ENCFF647RUH, ENCFF655CUI, ENCFF656DRS, ENCFF658NHH, ENCFF661TOM, ENCFF672WYO, ENCFF673GRZ, ENCFF678CRA, ENCFF680WIN, ENCFF689UNV, ENCFF691DJE, ENCFF693POR, ENCFF698WQO, ENCFF707HQI, ENCFF712BKP, ENCFF712EKU, ENCFF713JXV, ENCFF716NXU, ENCFF724VJN, ENCFF727EPG, ENCFF737VKP, ENCFF740WXS, ENCFF743NNG, ENCFF747VYT, ENCFF756QJD, ENCFF757JMT, ENCFF758BKM, ENCFF759HJA, ENCFF765UBL, ENCFF766UJI, ENCFF770WIT, ENCFF775OZV, ENCFF780UQU, ENCFF781XUM, ENCFF790WIY, ENCFF791ZDR, ENCFF794GVC, ENCFF801SNQ, ENCFF809QBQ, ENCFF812LAI, ENCFF819JGD, ENCFF820JMO, ENCFF829WND, ENCFF830CBI, ENCFF838BEV, ENCFF845NUY, ENCFF848LWJ, ENCFF853PNO, ENCFF855UFX, ENCFF860SGX, ENCFF861RRQ, ENCFF863LMG, ENCFF864DTX, ENCFF867FTP, ENCFF869DVY, ENCFF871CMC, ENCFF872SFD, ENCFF877VSZ, ENCFF881YOK, ENCFF886UAF, ENCFF894COY, ENCFF898CAY, ENCFF900AIQ, ENCFF903ULI, ENCFF904KCQ, ENCFF906CJJ, ENCFF910CTW, ENCFF916JWW, ENCFF921PGH, ENCFF926FRX, ENCFF931NMQ, ENCFF934VFW, ENCFF948BDY, ENCFF950FFF, ENCFF953WBM, ENCFF955YCX, ENCFF956ZKG, ENCFF959CWA, ENCFF960QTC, ENCFF964DLW, ENCFF966VVA, ENCFF970LRH, ENCFF984QED, ENCFF997QQG, ENCFF999ZYF chr8 84420918 84420919 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000057672.17, Pkn1 ENCFF083BIG, ENCFF094CCP, ENCFF108UNS, ENCFF207DLW, ENCFF264DCN, ENCFF273CJD, ENCFF277XPM, ENCFF313ERY, ENCFF319INV, ENCFF330IYN, ENCFF332ZPO, ENCFF494YXM, ENCFF585YYC, ENCFF645QUX, ENCFF775RSS, ENCFF852ZDB, ENCFF876MJS, ENCFF941QCZ, ENCFF960LQP, ENCFF037LEJ, ENCFF045YRV, ENCFF061WTN, ENCFF098AYQ, ENCFF118PQI, ENCFF207HZS, ENCFF324ITL, ENCFF358UHV, ENCFF370VOV, ENCFF371ZDG, ENCFF468RDR, ENCFF483SQS, ENCFF504PGI, ENCFF538ZTW, ENCFF549KAB, ENCFF565DII, ENCFF635XED, ENCFF668SQN, ENCFF673GRZ, ENCFF678CRA, ENCFF724VJN, ENCFF810SCH, ENCFF814PHK, ENCFF848UMJ, ENCFF866IHG, ENCFF894COY, ENCFF904KCQ, ENCFF916BSM, ENCFF934QGX, ENCFF970WCD, ENCFF997QQG chr8 85202148 85202149 + Predicted SINE|B4|ID_B1 ENSMUSG00000034656.19, Cacna1a SRR2089603, SRR2089604, SRR2089606, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr8 85415370 85415393 + Predicted SINE|Alu|B1F ENSMUSG00000001909.17, Trmt1 ENCFF001NDA, ENCFF051PTY, ENCFF056GXQ, ENCFF064PBF, ENCFF273CJD, ENCFF289WHW, ENCFF308LTO, ENCFF313ERY, ENCFF352VWM, ENCFF426QFT, ENCFF519IZA, ENCFF552NWL, ENCFF671ERF, ENCFF734FHF, ENCFF773VFS, ENCFF828WIK, ENCFF907HVO, ENCFF924VRI, ENCFF931DDH, ENCFF942WIP, ENCFF065LOT, ENCFF065TCZ, ENCFF326UXM, ENCFF335ZSA, ENCFF348FTH, ENCFF408NBX, ENCFF587VDB, ENCFF636NES, ENCFF647TTU, ENCFF766LGO, ENCFF324ITL, ENCFF399YLV, ENCFF450CUC, ENCFF643SBQ, ENCFF644EGG, ENCFF758BKM, ENCFF765AQX, ENCFF781XUM, ENCFF821HAZ, ENCFF843WRN, ENCFF906CJJ, ENCFF926IDV, ENCFF948YKH, ENCFF950FFF, ENCFF749STK, ENCFF911OIZ chr8 86162196 86162217 - Predicted LTR|ERVK|RMER17A2 ENSMUSG00000036934.10, 4921524J17Rik DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR9080664, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr8 86461775 86461776 + Predicted SINE|B4|B4 ENSMUSG00000109754.3, Gm39214 SRR2089607, SRR2089629, SRR2089632, SRR2089635, SRR2089648 chr8 86480332 86480333 - Predicted SINE|B4|ID_B1 ENSMUSG00000031703.9, Itfg1 SRR2089622, SRR2089623, SRR2089629, SRR2089631 chr8 88185065 88185083 + Annotated LTR|ERVK|RMER19C ENSMUSG00000098360.2, 4930535O05Rik ENSMUST00000184406.2, NR_166505.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 88368837 88368838 - Annotated LTR|ERV1|MER90a NR_131165.1 chr8 91085614 91085615 - Predicted LTR|ERVL|RMER15 ENSMUSG00000043668.14, Tox3 DRR091694, SRR15198221, SRR15198222, SRR15198224 chr8 91086226 91086227 - Predicted LTR|ERVK|RLTR33 ENSMUSG00000043668.14, Tox3 DRR091688, DRR091698, SRR11428468, SRR11428470, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198227, SRR2927111, SRR9178978 chr8 91489223 91489224 - Annotated LTR|ERVK|RLTR20A2B_MM ENSMUSG00000110212.2, Gm35963 ENSMUST00000211762.2 ENCFF001NCR, DRR091696, SRR15198217, SRR2927111, SRR2927112 chr8 91677293 91677342 + Predicted LINE|L1|L1Lx_I ENSMUSG00000056608.15, Chd9 ENCFF076CCZ, ENCFF108UNS, ENCFF117BGT, ENCFF196PBF, ENCFF206EGD, ENCFF262WAE, ENCFF269UZL, ENCFF313ERY, ENCFF319INV, ENCFF348VIH, ENCFF379JPQ, ENCFF403ORF, ENCFF462ABU, ENCFF486NGU, ENCFF489VZI, ENCFF535YBP, ENCFF544BEF, ENCFF552DRF, ENCFF552NWL, ENCFF554PUC, ENCFF670YKO, ENCFF686EWL, ENCFF705JRV, ENCFF707QJV, ENCFF773VFS, ENCFF787LWL, ENCFF884TJE, ENCFF906FNQ, ENCFF907HVO, ENCFF951MOU, ENCFF003GJV, ENCFF012HVN, ENCFF077CYB, ENCFF124SSE, ENCFF136DUH, ENCFF148BPZ, ENCFF167GWU, ENCFF222MKT, ENCFF240OIM, ENCFF255ESE, ENCFF257EYD, ENCFF272VMY, ENCFF328TJH, ENCFF399TOF, ENCFF462HZM, ENCFF477MBL, ENCFF484PQK, ENCFF524PAV, ENCFF527XBQ, ENCFF591WVP, ENCFF620FXM, ENCFF705CES, ENCFF755REI, ENCFF758JNE, ENCFF786BUI, ENCFF796TQV, ENCFF806MTS, ENCFF858OFI, ENCFF881DTW, ENCFF956RCJ, ENCFF962ZCT, ENCFF985NHB chr8 91858631 91858632 - Predicted SINE|Alu|B1F ENSMUSG00000031667.17, Aktip ENCFF437AJW, ENCFF576EOD, SRR10697196, SRR9178985, SRR9178988 chr8 94511732 94511733 - Predicted LINE|L1|L1M5 ENSMUSG00000097520.4, 4930488L21Rik SRR2089636, SRR2089638, SRR2089639 chr8 9478687 9478711 - Predicted SINE|Alu|B1F ENSMUSG00000079157.5, Nalf1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr8 94859512 94859513 + Predicted SINE|B4|RSINE1 ENSMUSG00000031757.8, Mt4 SRR2089605, SRR2089607, SRR2089611, SRR2089617, SRR2089618, SRR2089619, SRR2089621, SRR2089635, SRR2089636, SRR2089637, SRR2089639, SRR2089640, SRR2089647 chr8 94859608 94859609 + Predicted LINE|L1|Lx9 ENSMUSG00000031757.8, Mt4 SRR2089605, SRR2089607, SRR2089611, SRR2089617, SRR2089618, SRR2089619, SRR2089621, SRR2089635, SRR2089636, SRR2089637, SRR2089639, SRR2089640, SRR2089647 chr8 95316827 95316828 - Predicted SINE|MIR|MIRc ENSMUSG00000031774.9, Psme3ip1 ENCFF076CCZ, ENCFF147GLI, ENCFF279BVM, ENCFF012HVN, ENCFF127KHN, ENCFF140WZW, ENCFF440IAL, ENCFF466RIS, ENCFF632HDE chr8 96223058 96223076 + Annotated LTR|ERVL-MaLR|MLT1D ENSMUSG00000110427.2, 4933406B17Rik ENSMUST00000212602.2, ENSMUST00000212927.2 DRR091689, DRR091690, DRR091692, DRR091694, DRR091697, SRR10697196, SRR10697199, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR13142123, SRR15198217, SRR15198218, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR9080664, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178989 chr8 96262042 96262043 + Predicted SINE|Alu|B1F ENSMUSG00000036598.5, Ccdc113 SRR2089617, SRR2089621, SRR2089622, SRR2089629, SRR2089631, SRR2089633, SRR2089634, SRR2089636, SRR2089638, SRR2089639, SRR2089644, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr8 97238968 97239004 + Annotated LINE|L1|Lx8 ENSMUSG00000110717.2, 1700047G07Rik ENSMUST00000212030.2, ENSMUST00000212351.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6904685, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 100078892 100078920 - Predicted LINE|L1|Lx8b ENSMUSG00000103407.2, 4930540E01Rik DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9080665, SRR9178981, SRR9178982, SRR9178985, SRR9178987 chr9 100205564 100205598 - Annotated LTR|ERVK|RLTR17 ENSMUSG00000101042.2, Gm28167 ENSMUST00000187644.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643192, SRR5643199, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178978, SRR9178979, SRR9178981, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr9 10080372 10080373 - Predicted LINE|L1|L1VL1 ENSMUSG00000039488.16, Cntn5 DRR091689, DRR091690, DRR091691, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697203, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR6338004, SRR9080666, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178989, SRR9178990 chr9 101868934 101868966 + Annotated LTR|ERVL|MT2A ENSMUSG00000120943.1, ENSMUSG00000120943 ENSMUST00000246600.1, ENSMUST00000247167.1 ENCFF198RBJ chr9 102049937 102049938 + Annotated LTR|ERVL-MaLR|MLT1G ENSMUSG00000102963.2, Gm37945 ENSMUST00000192536.2 chr9 102436499 102436500 + Annotated LINE|L1|HAL1 ENSMUSG00000100279.2, Gm29387 ENSMUST00000189074.2 chr9 103949591 103949592 + Predicted LTR|ERVL-MaLR|ORR1E ENSMUSG00000090150.11, Acad11 DRR091688, DRR091689, DRR091694, DRR091695, DRR091699, SRR10697196, SRR13142121, SRR13142122, SRR15198222, SRR15198224, SRR15198228, SRR2040601, SRR2927112, SRR2927113 chr9 107173225 107173226 + Annotated SINE|Alu|B1_Mm ENSMUSG00000032578.8, Cish ENSMUST00000085102.6 chr9 107427075 107427076 + Predicted LINE|RTE-BovB|MamRTE1 ENSMUSG00000010044.13, Zmynd10 ENCFF886BRO, ENCFF932SOZ, SRR3178203, SRR3178204, SRR3178205, SRR5643191, SRR6904683 chr9 110111737 110111738 - Annotated LTR|ERVK|RLTR19 NR_168670.1, NR_168669.1, NR_168668.1 chr9 110156313 110156314 + Predicted SINE|Alu|B1F2 ENSMUSG00000032485.15, Scap SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089649, SRR2089650 chr9 111408674 111408675 - Predicted LINE|L1|L1MdF_I ENSMUSG00000032502.9, Stac SRR2089636, SRR2089638, SRR2089639, SRR2089640, SRR2089650, SRR2089651 chr9 114290797 114290798 - Annotated SINE|B4|B4A NR_168641.1 SRR10697198, SRR10697203, SRR9178976 chr9 114648152 114648153 - Annotated DNA|hAT-Charlie|Charlie29a ENSMUSG00000120946.1, ENSMUSG00000120946 ENSMUST00000246607.1 ENCFF067UCQ, ENCFF134HVE, ENCFF170XMM, ENCFF236TUH, ENCFF390NKP, ENCFF484HRX, ENCFF588DUN, ENCFF592GVA, ENCFF657UWH, ENCFF686KMX, ENCFF785TEQ, ENCFF804UQS, ENCFF808PVJ, ENCFF160TQC, ENCFF344OJQ, ENCFF423TSB, ENCFF641WPY chr9 115713713 115713740 + Predicted LINE|L2|L2a ENSMUSG00000056880.15, Gadl1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080664, SRR9080665, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 117460980 117460992 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000039607.18, Rbms3 DRR091688, DRR091689, DRR091691, DRR091693, DRR091694, DRR091696, DRR091698, DRR091699, SRR13142118, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178986, SRR9178989, SRR9178990, SRR9178992 chr9 118235216 118235217 - Annotated LTR|ERVK|RLTR11A2 ENSMUSG00000098161.3, Platr11 ENSMUST00000247002.1 ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr9 118269771 118269804 - Predicted LINE|L1|Lx8 ENSMUSG00000098161.3, Platr11 DRR091689, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091698, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697203, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178986, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 118716289 118716290 - Annotated LTR|ERVL-MaLR|ORR1B2 NR_168556.1 chr9 119274354 119274355 + Predicted LINE|L2|L2b ENSMUSG00000042787.16, Exog ENCFF001RTN, ENCFF002EZW, ENCFF002EZY, ENCFF489IGD chr9 119722252 119722256 - Predicted LINE|L1|Lx8 ENSMUSG00000097223.3, Gm2449 ENCFF289WHW, DRR091688, DRR091690, DRR091691, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697203, SRR11428467, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198224, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643192, SRR6904683, SRR6904684, SRR6904685, SRR9080662, SRR9080663, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178990, SRR9178991, SRR9178992 chr9 120663429 120663430 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000111720.2, Gm39459 ENSMUST00000215662.2 DRR091688, DRR091693, SRR10697203, SRR15198220, SRR15198221, SRR15198225, SRR15198226, SRR2927112, SRR2927113 chr9 120776226 120776227 - Predicted LINE|L1|Lx8 ENSMUSG00000040936.16, Ulk4 SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089613, SRR2089615, SRR2089616, SRR2089618, SRR2089619, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089642, SRR2089645, SRR2089646, SRR2089649, SRR2089651 chr9 121426279 121426280 - Annotated LTR|ERVK|RMER19B ENSMUSG00000120680.1, ENSMUSG00000120680 ENSMUST00000245107.1 chr9 122139969 122140008 - Annotated LTR|ERVL-MaLR|MLT1F1 ENSMUSG00000097572.4, Gm26797 ENSMUST00000180685.2, NR_168547.1, NR_168548.1 ENCFF056GXQ, ENCFF064PBF, ENCFF120DEX, ENCFF133PEB, ENCFF138QRF, ENCFF196PBF, ENCFF221JNS, ENCFF262URV, ENCFF289WHW, ENCFF352VWM, ENCFF401HCS, ENCFF420RFN, ENCFF432ZLQ, ENCFF439OFV, ENCFF524EDD, ENCFF552NWL, ENCFF605IFN, ENCFF641QXI, ENCFF654BXL, ENCFF670YKO, ENCFF686EWL, ENCFF698LQF, ENCFF723KAG, ENCFF727WWV, ENCFF773VFS, ENCFF793CWJ, ENCFF828WIK, ENCFF849GVQ, ENCFF858CRT, ENCFF868XLZ, ENCFF896IIZ, ENCFF924VRI, ENCFF931DDH, ENCFF934ULS, ENCFF941QCZ, ENCFF951MOU, ENCFF985BLV, ENCFF014CMK, ENCFF024CUG, ENCFF034WGV, ENCFF080DNG, ENCFF082OML, ENCFF118YHP, ENCFF124SSE, ENCFF136TYP, ENCFF141YUD, ENCFF149BQJ, ENCFF177LXI, ENCFF194DAO, ENCFF222MKT, ENCFF228CMT, ENCFF249LSC, ENCFF254TFB, ENCFF260UQJ, ENCFF277JGD, ENCFF315HBU, ENCFF454DOT, ENCFF483KXD, ENCFF497KLL, ENCFF518TUP, ENCFF578MOR, ENCFF655CUI, ENCFF695XIY, ENCFF698WQO, ENCFF705CES, ENCFF791ZDR, ENCFF858OFI, ENCFF949QCF, ENCFF953FGT, ENCFF998BIQ chr9 123147870 123147871 - Predicted LINE|L1|MusHAL1 ENSMUSG00000121445.1, ENSMUSG00000121445 SRR2089605, SRR2089641, SRR2089648 chr9 123792630 123792631 - Predicted LTR|ERVL-MaLR|MTD ENSMUSG00000060509.6, Xcr1 SRR2089630, SRR2089633, SRR2089636, SRR2089638, SRR2089647, SRR2089648, SRR2089649 chr9 13105859 13105907 - Annotated LTR|ERVK|IAPLTR3 ENSMUSG00000111830.2, 4930568E12Rik ENSMUST00000215337.2, ENSMUST00000216694.2, NR_040755.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR5643199, SRR5643201, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991 chr9 13671715 13671716 + Predicted DNA|TcMar-Tigger|X6a_DNA ENSMUSG00000031918.17, Mtmr2 ENCFF181RDS, ENCFF793IYH, ENCFF834VIK, ENCFF854MWX, ENCFF243TPB, ENCFF296UDD, ENCFF656DRS, DRR091690, SRR9178985 chr9 13699612 13699613 + Predicted SINE|Alu|B1_Mur4 ENSMUSG00000031918.17, Mtmr2 ENCFF348VIH, ENCFF723QIC, ENCFF137OYQ, ENCFF255XDN chr9 15275686 15275693 + Predicted LTR|ERVL-MaLR|ORR1A4 ENSMUSG00000111763.2, Gm34973 DRR091690, DRR091691, DRR091692, DRR091694, DRR091697, DRR091698, DRR091699, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927113 chr9 18341911 18341912 + Annotated LTR|ERVL-MaLR|MTB_Mm NM_144934.3 chr9 18390238 18390239 + Predicted LTR|ERVL-MaLR|MTE2a ENSMUSG00000038691.6, Mbd3l1 SRR11428467, SRR11428468, SRR11428470, SRR15198224, SRR6338004 chr9 18777730 18777731 + Predicted LINE|L1|L1MdA_VII ENSMUSG00000062868.5, Or7g18 SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089651 chr9 18829842 18829843 + Predicted LTR|ERVK|RMER16-int ENSMUSG00000095957.3, Or7g19 SRR2089635, SRR2089639, SRR2089640, SRR2089651 chr9 18892523 18892525 + Predicted LINE|L1|L1MdTf_II ENSMUSG00000095525.2, Or7g12 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr9 19533281 19533332 + Predicted LTR|ERVL|LTR33C ENSMUSG00000057551.11, Zfp317 ENCFF001NCP, ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTF, ENCFF001RTJ, ENCFF001RTN, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF022FSI, ENCFF027IIP, ENCFF059IQN, ENCFF064PBF, ENCFF089PFT, ENCFF090USB, ENCFF104LLO, ENCFF116MYR, ENCFF262URV, ENCFF345OIF, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF478FDA, ENCFF502ANK, ENCFF514BEA, ENCFF521IDK, ENCFF641QXI, ENCFF670CXH, ENCFF696TCH, ENCFF783MLO, ENCFF828WIK, ENCFF874ELO, ENCFF883UYA, ENCFF888LGA, ENCFF931PFF, ENCFF989HJD, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF033ZUH, ENCFF060JCS, ENCFF065TCZ, ENCFF115LWP, ENCFF156YWS, ENCFF170XMM, ENCFF199IRM, ENCFF236TUH, ENCFF245ZOR, ENCFF269WEZ, ENCFF270ERO, ENCFF296VFB, ENCFF304DLW, ENCFF330FNX, ENCFF339MSB, ENCFF355AMN, ENCFF377UGQ, ENCFF429BQZ, ENCFF442FJC, ENCFF455DHP, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF516BTG, ENCFF521NCL, ENCFF533DWD, ENCFF587VDB, ENCFF596QWT, ENCFF632LPV, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF714CKE, ENCFF721ASG, ENCFF747XPP, ENCFF785TEQ, ENCFF808PVJ, ENCFF829RHM, ENCFF834VIK, ENCFF838YLT, ENCFF845NXM, ENCFF854MWX, ENCFF912MUD, ENCFF923VUD, ENCFF924LPZ, ENCFF962FIU, ENCFF053NFR, ENCFF066MTU, ENCFF073RJJ, ENCFF082BJV, ENCFF089SWU, ENCFF108JLQ, ENCFF118YHP, ENCFF148BPZ, ENCFF235HER, ENCFF267KZS, ENCFF286GUQ, ENCFF302MXO, ENCFF321NRW, ENCFF338LFG, ENCFF376PQU, ENCFF390ZZH, ENCFF430ERW, ENCFF437QAE, ENCFF490ULA, ENCFF591WVP, ENCFF615ULR, ENCFF619SKV, ENCFF644EGG, ENCFF698WQO, ENCFF705CES, ENCFF716NXU, ENCFF749XRU, ENCFF871CMC, ENCFF877VSZ, ENCFF903ULI, ENCFF906CJJ, ENCFF921PGH, ENCFF075EMK, ENCFF160TQC, ENCFF186VNL, ENCFF199IWW, ENCFF254YNR, ENCFF277QHC, ENCFF306ADU, ENCFF342GAL, ENCFF399XUL, ENCFF446LMP, ENCFF494ZWE, ENCFF499GDC, ENCFF555BQD, ENCFF569XGG, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF847LGC, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091696, SRR10697203, SRR13142118, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR6338004, SRR9080663, SRR9080666 chr9 19533387 19533473 + Annotated LTR|ERVL|LTR33C ENSMUSG00000057551.11, Zfp317 ENSMUST00000213725.2, ENSMUST00000208694.2, NM_172918.4, NR_153375.1 ENCFF001NCP, ENCFF001NDA, ENCFF001NDD, ENCFF001NDZ, ENCFF001NEC, ENCFF001RTD, ENCFF001RTJ, ENCFF001RTN, ENCFF002ERU, ENCFF002ERW, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF022FSI, ENCFF027IIP, ENCFF059IQN, ENCFF064PBF, ENCFF089PFT, ENCFF090USB, ENCFF104LLO, ENCFF116MYR, ENCFF178ZVU, ENCFF262URV, ENCFF345OIF, ENCFF426QFT, ENCFF437AJW, ENCFF450WAV, ENCFF478FDA, ENCFF502ANK, ENCFF514BEA, ENCFF521IDK, ENCFF641QXI, ENCFF670CXH, ENCFF696TCH, ENCFF771LLL, ENCFF783MLO, ENCFF828WIK, ENCFF874ELO, ENCFF883UYA, ENCFF888LGA, ENCFF931PFF, ENCFF989HJD, ENCFF993QUE, ENCFF996STG, ENCFF005GQR, ENCFF013CHH, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF143BIC, ENCFF148XRK, ENCFF151YNV, ENCFF156YWS, ENCFF170XMM, ENCFF195JLT, ENCFF199IRM, ENCFF222GPK, ENCFF234LUQ, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF269WEZ, ENCFF270ERO, ENCFF271OHB, ENCFF274ESJ, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF326UXM, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF348FTH, ENCFF355AMN, ENCFF359GCY, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF408NBX, ENCFF429BQZ, ENCFF442FJC, ENCFF444YCN, ENCFF448TTG, ENCFF454ZUS, ENCFF455DHP, ENCFF465BBM, ENCFF467LJD, ENCFF468AKL, ENCFF478KOR, ENCFF484HRX, ENCFF487DYP, ENCFF500QZK, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF521NCL, ENCFF532UKS, ENCFF533DWD, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF595WXV, ENCFF596QWT, ENCFF604SXL, ENCFF609KQB, ENCFF609ZVL, ENCFF632LPV, ENCFF636NES, ENCFF642YTY, ENCFF643XFK, ENCFF647TTU, ENCFF651SDJ, ENCFF654AEJ, ENCFF657FNE, ENCFF657OJR, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF697AST, ENCFF704WWK, ENCFF712DGP, ENCFF714CKE, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF818BAS, ENCFF822PGJ, ENCFF826RUZ, ENCFF829RHM, ENCFF831ISX, ENCFF834VIK, ENCFF838YLT, ENCFF840XYZ, ENCFF845NXM, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF868WEJ, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF924LPZ, ENCFF933KQV, ENCFF933MOZ, ENCFF935LAF, ENCFF939IUH, ENCFF943XKB, ENCFF945ICZ, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF967NOO, ENCFF975NCY, ENCFF978EQI, ENCFF053NFR, ENCFF066MTU, ENCFF073RJJ, ENCFF082BJV, ENCFF089SWU, ENCFF108JLQ, ENCFF118YHP, ENCFF148BPZ, ENCFF187BHR, ENCFF235HER, ENCFF267KZS, ENCFF268ZHE, ENCFF286GUQ, ENCFF302MXO, ENCFF321NRW, ENCFF338LFG, ENCFF376PQU, ENCFF390ZZH, ENCFF430ERW, ENCFF490ULA, ENCFF591WVP, ENCFF615ULR, ENCFF619SKV, ENCFF637PIP, ENCFF644EGG, ENCFF646GBS, ENCFF698WQO, ENCFF705CES, ENCFF716NXU, ENCFF749XRU, ENCFF751QWY, ENCFF806XNV, ENCFF871CMC, ENCFF877VSZ, ENCFF903ULI, ENCFF906CJJ, ENCFF921PGH, ENCFF966VVA, ENCFF008XVO, ENCFF014SLC, ENCFF062GNP, ENCFF075EMK, ENCFF119IHT, ENCFF160TQC, ENCFF186VNL, ENCFF197NCG, ENCFF199IWW, ENCFF242SVY, ENCFF248ELC, ENCFF254YNR, ENCFF260KJY, ENCFF269AST, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF366CUG, ENCFF399XUL, ENCFF423TSB, ENCFF442OKF, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF494ZWE, ENCFF499CDP, ENCFF499GDC, ENCFF510AYI, ENCFF510IAG, ENCFF517DCU, ENCFF525QIM, ENCFF555BQD, ENCFF569XGG, ENCFF574YMK, ENCFF582WGH, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF670VVN, ENCFF705HQV, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF749STK, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF847LGC, ENCFF854IBU, ENCFF888IIL, ENCFF904RJF, ENCFF906OAF, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, DRR091696, SRR10697203, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR6338004, SRR9080663, SRR9080666 chr9 20360780 20360787 - Predicted LTR|ERVL-MaLR|MTA_Mm ENSMUSG00000063108.16, Zfp26 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr9 20393018 20393035 - Predicted LTR|ERV1|MLTR14 ENSMUSG00000059475.14, Zfp426 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, SRR10697195, SRR10697196, SRR10697197, SRR10697199, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198225, SRR2927113, SRR9178977, SRR9178978, SRR9178980, SRR9178983, SRR9178984, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr9 20781912 20781936 + Predicted SINE|B2|B3A ENSMUSG00000038884.15, Shfl ENCFF023RRS, ENCFF460NGS, ENCFF494YXM, ENCFF704GEB, ENCFF883UYA, ENCFF022ACG, ENCFF107YGR, ENCFF185TRT, ENCFF229TCX, ENCFF261EQP, ENCFF277JGD, ENCFF319YFJ, ENCFF366IEQ, ENCFF411YXB, ENCFF420RGI, ENCFF453MPR, ENCFF464KYQ, ENCFF485GFE, ENCFF498OHV, ENCFF543GNI, ENCFF595NMM, ENCFF683WFA, ENCFF755REI, ENCFF772QLP, ENCFF779MMO, ENCFF847HFJ, ENCFF908MGO chr9 20913778 20913779 + Predicted SINE|Alu|B1_Mur1 ENSMUSG00000003299.11, Mrpl4 ENCFF001RTJ, ENCFF001RTN, ENCFF048IBL, ENCFF064PBF, ENCFF106RGV, ENCFF133PEB, ENCFF262URV, ENCFF344ILW, ENCFF462ABU, ENCFF470MXU, ENCFF560YXX, ENCFF581WWO, ENCFF641QXI, ENCFF686EWL, ENCFF734FHF, ENCFF771LLL, ENCFF773VFS, ENCFF849GVQ, ENCFF922KQY, ENCFF274ESJ, ENCFF775SSI, ENCFF933KQV, ENCFF014CMK, ENCFF061WTN, ENCFF126WDH, ENCFF194DAO, ENCFF235HER, ENCFF243LBQ, ENCFF306OWL, ENCFF346HDC, ENCFF348RRM, ENCFF390ZZH, ENCFF429ZEH, ENCFF476JSK, ENCFF497GLK, ENCFF643SBQ, ENCFF765UBL, ENCFF955YCX, ENCFF998BIQ, ENCFF178HDG, ENCFF510IAG, ENCFF574YMK, ENCFF854IBU, SRR13142121, SRR6338004 chr9 20926235 20926260 + Predicted SINE|B4|ID_B1 ENSMUSG00000037405.9, Icam1 ENCFF022FSI, ENCFF027BYX, ENCFF075MGH, ENCFF104LLO, ENCFF142CUS, ENCFF205GJI, ENCFF273TLO, ENCFF284OMO, ENCFF307VAF, ENCFF347UAC, ENCFF533JUU, ENCFF533NLR, ENCFF605IFN, ENCFF698LQF, ENCFF704GEB, ENCFF795DLS, ENCFF868XLZ, ENCFF884TJE, ENCFF915FID, ENCFF935XRF, ENCFF941QCZ, ENCFF972IVS, ENCFF234LUQ, ENCFF935LAF, ENCFF027GCQ, ENCFF054EOL, ENCFF057FFG, ENCFF082BJV, ENCFF177LXI, ENCFF178ZXW, ENCFF247VEN, ENCFF320CXH, ENCFF332IRR, ENCFF390AUP, ENCFF426ZCK, ENCFF478YRJ, ENCFF490ULA, ENCFF549IDH, ENCFF609WDV, ENCFF656DRS, ENCFF672WYO, ENCFF696XZL, ENCFF742DJH, ENCFF817HZQ, ENCFF830CBI, ENCFF855UFX, ENCFF871CMC, ENCFF952LUC, ENCFF260KJY, ENCFF349AIG chr9 21150810 21150845 - Predicted SINE|B2|B3 ENSMUSG00000003308.16, Keap1 ENCFF001NCP, ENCFF001NDZ, ENCFF005NBP, ENCFF102AMK, ENCFF206EGD, ENCFF212ZXS, ENCFF326TQL, ENCFF521UGJ, ENCFF590NVM, ENCFF696TCH, ENCFF813GGJ, ENCFF878SQO, ENCFF914BRK, ENCFF922KQY, ENCFF985BLV, ENCFF005GQR, ENCFF065TCZ, ENCFF067UCQ, ENCFF115LWP, ENCFF143BIC, ENCFF170XMM, ENCFF173IVH, ENCFF236TUH, ENCFF247QZW, ENCFF261ZZF, ENCFF270ERO, ENCFF315OOH, ENCFF335ZSA, ENCFF364LFJ, ENCFF377LAC, ENCFF394BDJ, ENCFF408NBX, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF467LJD, ENCFF484HRX, ENCFF510LAE, ENCFF519YGA, ENCFF573UIH, ENCFF587VDB, ENCFF588DUN, ENCFF595WXV, ENCFF642YTY, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF683CWD, ENCFF686KMX, ENCFF714CKE, ENCFF785TEQ, ENCFF804UQS, ENCFF854MWX, ENCFF855FCX, ENCFF886BRO, ENCFF914YDJ, ENCFF933MOZ, ENCFF939IUH, ENCFF967NOO, ENCFF088PZI, ENCFF157IFW, ENCFF249LSC, ENCFF348RRM, ENCFF369VAI, ENCFF598LJF, ENCFF615ULR, ENCFF741PLM, ENCFF860SGX, ENCFF008XVO, ENCFF075EMK, ENCFF199IWW, ENCFF306ADU, ENCFF399XUL, ENCFF423TSB, ENCFF499CDP, ENCFF525QIM, ENCFF626KIV, ENCFF723MAR, ENCFF782WDV, ENCFF783KGQ, ENCFF803OIY, ENCFF827NYZ, ENCFF888IIL, ENCFF906OAF, SRR10697195, SRR10697200, SRR10697203, SRR11428468, SRR13142122, SRR15198224, SRR15198227, SRR9178982, SRR9178985, SRR9178986, SRR9178989 chr9 21322811 21322812 - Predicted SINE|Alu|B1F ENSMUSG00000097665.2, Gm16853 ENCFF065LOT, ENCFF725ATS, ENCFF831ISX, DRR091692, DRR091698, SRR10697203, SRR11428468, SRR13142118, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198224, SRR15198226, SRR2927111, SRR2927113, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178991 chr9 21849749 21849750 + Annotated SINE|MIR|MIRc ENSMUSG00000040563.14, Plppr2 ENSMUST00000188468.2 ENCFF002EZY chr9 21997326 21997462 - Predicted SINE|B4|RSINE1 ENSMUSG00000038895.17, ENSMUSG00000066839.13, Zfp653, Ecsit ENCFF001NDA, ENCFF027BYX, ENCFF059IQN, ENCFF074HTO, ENCFF090USB, ENCFF116MYR, ENCFF140VGY, ENCFF179WPT, ENCFF189WYV, ENCFF212ZXS, ENCFF262URV, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF326TQL, ENCFF421SNO, ENCFF514BEA, ENCFF514JOV, ENCFF593RAV, ENCFF782JNB, ENCFF802GAN, ENCFF828WIK, ENCFF931PFF, ENCFF937GBW, ENCFF991TPB, ENCFF013HYW, ENCFF033ZUH, ENCFF084CWD, ENCFF115LWP, ENCFF199ZDO, ENCFF315OOH, ENCFF446FOZ, ENCFF510LAE, ENCFF521NCL, ENCFF573UIH, ENCFF587VDB, ENCFF647TTU, ENCFF651SDJ, ENCFF667SYQ, ENCFF670FEL, ENCFF694NRG, ENCFF704WWK, ENCFF712DGP, ENCFF826RUZ, ENCFF834VIK, ENCFF854KNE, ENCFF912MUD, ENCFF033DWC, ENCFF053NFR, ENCFF056UGH, ENCFF057FFG, ENCFF065ZIE, ENCFF116QKZ, ENCFF172DMS, ENCFF243TPB, ENCFF267KZS, ENCFF279EVY, ENCFF321NRW, ENCFF338LFG, ENCFF341YZB, ENCFF357QTB, ENCFF411KCB, ENCFF426ETE, ENCFF426FAF, ENCFF430ERW, ENCFF458EUS, ENCFF490ULA, ENCFF543PXT, ENCFF606XHA, ENCFF611OFH, ENCFF637PIP, ENCFF705CES, ENCFF727EPG, ENCFF751QWY, ENCFF838BEV, ENCFF877VSZ, ENCFF900AIQ, ENCFF994PPZ, ENCFF119IHT, ENCFF494ZWE, ENCFF510AYI, ENCFF555BQD, ENCFF670VVN, ENCFF716YKR, ENCFF728WJB, ENCFF827NYZ, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142122, SRR13142123, SRR15198217, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 22125134 22125156 - Annotated LTR|ERVK|RLTR9A3B ENSMUSG00000090925.3, 1810064F22Rik ENSMUST00000187399.2, ENSMUST00000188595.2, NR_027981.1 ENCFF001RTD, ENCFF001RTN, SRR2040601 chr9 24308854 24308862 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000074465.3, Gm10701 DRR091690, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178987 chr9 25172018 25172067 + Predicted LINE|L1|Lx2B ENSMUSG00000001833.18, Septin7 ENCFF027IIP, ENCFF082HKQ, ENCFF519IZA, ENCFF707QJV, ENCFF727WWV, ENCFF745HSV, ENCFF828WIK, ENCFF896MQK, ENCFF946AGD, ENCFF017LOD, ENCFF933KQV, ENCFF009AVK, ENCFF012KPC, ENCFF022ACG, ENCFF090EUZ, ENCFF118YHP, ENCFF136TYP, ENCFF142PTA, ENCFF151XBP, ENCFF166UTY, ENCFF194DAO, ENCFF209RRO, ENCFF228CMT, ENCFF239RQP, ENCFF240OIM, ENCFF260UQJ, ENCFF303BIV, ENCFF310HAL, ENCFF315HBU, ENCFF331YYO, ENCFF347EUO, ENCFF374VAZ, ENCFF397ZQU, ENCFF399TOF, ENCFF420RGI, ENCFF421DHQ, ENCFF422ZNC, ENCFF429ZEH, ENCFF433QNW, ENCFF437QAE, ENCFF439BEV, ENCFF450CUC, ENCFF462HZM, ENCFF464KYQ, ENCFF524PAV, ENCFF527XBQ, ENCFF578MOR, ENCFF591WVP, ENCFF601JTS, ENCFF635XED, ENCFF640RWH, ENCFF644EGG, ENCFF647KBV, ENCFF673BPE, ENCFF685FUZ, ENCFF685GDB, ENCFF694EPZ, ENCFF705CES, ENCFF753HNF, ENCFF794MMU, ENCFF803ZUN, ENCFF806MTS, ENCFF814TTQ, ENCFF816CPX, ENCFF817HZQ, ENCFF817NCH, ENCFF818ZJQ, ENCFF821HAZ, ENCFF843WRN, ENCFF854LJN, ENCFF903KDM, ENCFF906CJJ, ENCFF926IDV, ENCFF927LFD, ENCFF939UBM, ENCFF951PCM, ENCFF976SMI, ENCFF984QED, ENCFF985NHB, ENCFF671TUD chr9 26928220 26928225 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000031988.11, Vps26b SRR2089606, SRR2089608, SRR2089610, SRR2089611, SRR2089612, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089631, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr9 27033502 27033503 - Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000031990.16, Jam3 ENCFF001NDD, ENCFF521IDK, ENCFF696TCH, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697202, SRR11428467, SRR13142118, SRR15198221, SRR15198223, SRR15198227, SRR2040601, SRR9178979, SRR9178981, SRR9178982, SRR9178985, SRR9178987 chr9 33058067 33058068 + Predicted LINE|L1|L1MdA_III ENSMUSG00000111645.2, Gm32171 ENCFF143PHU, ENCFF197OUM, ENCFF302KQL, ENCFF407JTK chr9 33068934 33068935 - Predicted LTR|ERVK|IAPEz-int ENSMUSG00000102712.2, Gm37758 SRR2089603, SRR2089604, SRR2089617, SRR2089620, SRR2089621, SRR2089622, SRR2089629, SRR2089630, SRR2089631, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr9 33165529 33165548 + Predicted LTR|ERVK|RMER17C ENSMUSG00000111645.2, Gm32171 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198223, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9080662, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 36554671 36554672 - Annotated LTR|ERV1|RLTR48A ENSMUSG00000070313.9, Pate14 ENSMUST00000184901.2 ENCFF001NCR chr9 36687532 36687533 + Predicted SINE|ID|ID4 ENSMUSG00000096993.5, Gm26787 SRR6904683, SRR6904684, SRR6904685 chr9 36693435 36693436 + Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000096993.5, Gm26787 SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6904684 chr9 37223445 37223446 + Predicted LTR|ERVK|RLTR10C ENSMUSG00000111748.2, Gm34885 DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091696, DRR091697, DRR091698, SRR10697202, SRR11428467, SRR11428468, SRR11428470, SRR15198221, SRR15198222, SRR15198224, SRR15198228, SRR2927111, SRR9080666, SRR9178977, SRR9178981, SRR9178983, SRR9178985, SRR9178988, SRR9178990 chr9 38663595 38663596 + Annotated LINE|L1|Lx2 ENSMUSG00000061039.6, Or8b53 ENSMUST00000074740.5 chr9 40253055 40253082 + Predicted SINE|B4|B4 ENSMUSG00000087047.9, 1700110K17Rik DRR091688, DRR091690, DRR091691, DRR091693, DRR091694, DRR091695, DRR091696, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697202, SRR10697203, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 4138625 4138626 + Predicted LTR|ERVK|IAPLTR3 ENSMUSG00000110691.2, Gm5363 DRR091688, DRR091689, DRR091690, DRR091693, SRR10697196, SRR10697197, SRR10697198, SRR10697201, SRR10697202, SRR10697203, SRR13142118, SRR15198217, SRR15198219, SRR15198221, SRR15198223, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080663, SRR9080666, SRR9178978, SRR9178980, SRR9178982, SRR9178987 chr9 43905281 43905286 + Annotated LTR|ERV1|MLTR14 ENSMUSG00000111283.2, E230034D01Rik ENSMUST00000217357.2, ENSMUST00000214440.2 chr9 43905337 43905338 + Annotated LTR|ERV1|MLTR14 ENSMUSG00000111283.2, E230034D01Rik ENSMUST00000215430.2 chr9 44356594 44356655 - Predicted LTR|ERV1|MLTR14 ENSMUSG00000074397.6, Foxr1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697199, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198228, SRR2927113, SRR9178976, SRR9178977, SRR9178979, SRR9178982, SRR9178983, SRR9178984, SRR9178986, SRR9178989 chr9 44514001 44514002 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000032097.11, Ddx6 ENCFF001NCP, ENCFF001NCR, ENCFF048IBL, ENCFF296VFB, ENCFF454DOT, ENCFF598WAL, ENCFF877VSZ, SRR10697201, SRR10697203, SRR15198217, SRR15198218, SRR15198221, SRR15198223, SRR15198225, SRR15198227, SRR15198228, SRR2927111, SRR2927113 chr9 44583556 44583563 - Annotated LTR|ERV1|RLTR41 ENSMUSG00000110755.3, BC049987 ENSMUST00000217474.3, ENSMUST00000213859.3, ENSMUST00000244401.1, ENSMUST00000216987.3, ENSMUST00000246254.1, NR_165440.1 ENCFF001RTD, ENCFF001RTN chr9 45811554 45811555 - Predicted LTR|Gypsy|LTR88c ENSMUSG00000042790.17, Rnf214 ENCFF002DNB, ENCFF002EZU, ENCFF002FAE, ENCFF089WMB, ENCFF327MSM, ENCFF450WAV, ENCFF502ANK, ENCFF836JVX, ENCFF885AJK, ENCFF888LGA, ENCFF117ZMM, ENCFF255XDN, ENCFF302KQL, ENCFF470RDW, ENCFF689ZLL, ENCFF931NMQ, SRR13142121, SRR3178203, SRR3178205, SRR6904685, SRR9080662 chr9 45856330 45856331 - Annotated SINE|MIR|MIRb ENSMUSG00000034908.17, Sidt2 ENSMUST00000160927.8 ENCFF106GQS chr9 45866733 45866764 - Predicted SINE|B4|ID_B1 ENSMUSG00000034908.17, Sidt2 ENCFF002EZW, ENCFF027BYX, ENCFF104LLO, ENCFF140VGY, ENCFF159OVE, ENCFF163LPQ, ENCFF312CZB, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF348VIH, ENCFF351JWR, ENCFF379JPQ, ENCFF381JXP, ENCFF421ACV, ENCFF453XOG, ENCFF486NGU, ENCFF514BEA, ENCFF595GFM, ENCFF623BKO, ENCFF625JLB, ENCFF761RKP, ENCFF844KCR, ENCFF858CTQ, ENCFF880FYC, ENCFF907HVO, ENCFF914BRK, ENCFF934ZAP, ENCFF970JWC, ENCFF994BOT, ENCFF017LOD, ENCFF067UCQ, ENCFF236TUH, ENCFF379TZT, ENCFF408NBX, ENCFF442FJC, ENCFF608LAL, ENCFF697AST, ENCFF933MOZ, ENCFF037GFB, ENCFF057FFG, ENCFF080REY, ENCFF085RPW, ENCFF106RLX, ENCFF134VWD, ENCFF142PTA, ENCFF156ZQH, ENCFF177SGB, ENCFF205CDI, ENCFF273CBP, ENCFF278JAU, ENCFF285NFL, ENCFF302MXO, ENCFF310HAL, ENCFF315OFF, ENCFF352KGC, ENCFF382VCK, ENCFF387BVS, ENCFF406LFV, ENCFF424GQM, ENCFF437ZSM, ENCFF458EUS, ENCFF459TYQ, ENCFF466RIS, ENCFF483SQS, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF529LEZ, ENCFF569ELL, ENCFF581ZWM, ENCFF661UPO, ENCFF711XWR, ENCFF712BKP, ENCFF772QLP, ENCFF834TQY, ENCFF840DKD, ENCFF845NUY, ENCFF906CJJ, ENCFF197NCG, ENCFF481CFU, ENCFF592WZB, ENCFF906OAF, SRR9178985 chr9 45866830 45866918 - Predicted SINE|B4|ID_B1 ENSMUSG00000034908.17, Sidt2 ENCFF104LLO, ENCFF105KSL, ENCFF130KZZ, ENCFF138TOM, ENCFF140VGY, ENCFF142CUS, ENCFF163LPQ, ENCFF186RYS, ENCFF264RIV, ENCFF269UZL, ENCFF312CZB, ENCFF322VJD, ENCFF326TQL, ENCFF330LWU, ENCFF331WKS, ENCFF344ILW, ENCFF348VIH, ENCFF351JWR, ENCFF367BBB, ENCFF381JXP, ENCFF385MVU, ENCFF421ACV, ENCFF453XOG, ENCFF462ABU, ENCFF486NGU, ENCFF514BEA, ENCFF519IZA, ENCFF522VLI, ENCFF595GFM, ENCFF623BKO, ENCFF670CXH, ENCFF764TGO, ENCFF771LLL, ENCFF802GAN, ENCFF858CTQ, ENCFF884DLS, ENCFF907HVO, ENCFF914BRK, ENCFF934ZAP, ENCFF942WIP, ENCFF951UXE, ENCFF956WVJ, ENCFF970JWC, ENCFF994BOT, ENCFF017LOD, ENCFF587VDB, ENCFF737OUQ, ENCFF840XYZ, ENCFF952BCB, ENCFF037GFB, ENCFF037LEJ, ENCFF052RNG, ENCFF057FFG, ENCFF070YMI, ENCFF080REY, ENCFF085RPW, ENCFF087OKI, ENCFF089SWU, ENCFF117ZMM, ENCFF127KHN, ENCFF134VWD, ENCFF136TYP, ENCFF163GEC, ENCFF166UTY, ENCFF174EGP, ENCFF177SGB, ENCFF205CDI, ENCFF207HZS, ENCFF207RVA, ENCFF237JCE, ENCFF240OIM, ENCFF278JAU, ENCFF285NFL, ENCFF306FQJ, ENCFF310HAL, ENCFF315OFF, ENCFF346NGU, ENCFF352KGC, ENCFF380BYT, ENCFF382VCK, ENCFF390ZZH, ENCFF423GTP, ENCFF439BEV, ENCFF458EUS, ENCFF466RIS, ENCFF483SQS, ENCFF486BJT, ENCFF507VMW, ENCFF507WIK, ENCFF512LAN, ENCFF529LEZ, ENCFF548HOL, ENCFF581ZWM, ENCFF606XHA, ENCFF643SBQ, ENCFF661UPO, ENCFF673BPE, ENCFF705CES, ENCFF711XWR, ENCFF712BKP, ENCFF764AQK, ENCFF820JMO, ENCFF834TQY, ENCFF838BEV, ENCFF840DKD, ENCFF843WRN, ENCFF866IHG, ENCFF886UAF, ENCFF896XAZ, ENCFF916JWW, ENCFF932XKS, ENCFF936LNA, ENCFF951PCM, ENCFF956RCJ, ENCFF958LRX, ENCFF964DLW, ENCFF008XVO, ENCFF075EMK, ENCFF197NCG, ENCFF715CAJ, ENCFF847LGC, ENCFF932SOZ, SRR11428469, SRR9080662, SRR9178982, SRR9178985, SRR9178989 chr9 45953431 45953452 + Predicted LINE|L1|L1MdF_IV ENSMUSG00000034135.16, Sik3 ENCFF489VZI, ENCFF931DDH, ENCFF035BBA, ENCFF106RLX, ENCFF141YUD, ENCFF363PDR, ENCFF673BPE, ENCFF770WIT, ENCFF859MTL, ENCFF881YOK, ENCFF900LFN, ENCFF927LFD, ENCFF936DQW, ENCFF951PCM, ENCFF985NHB chr9 46231283 46231322 - Annotated LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000056617.13, 4931429L15Rik ENSMUST00000159565.8, NM_183104.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178205, SRR3178206, SRR5643190, SRR5643191, SRR5643192, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 46395358 46395359 + Predicted LTR|ERVL-MaLR|ORR1A2 ENSMUSG00000110767.2, Gm31432 SRR15198218, SRR15198219, SRR15198221 chr9 4676310 4676330 - Predicted LTR|ERVK|RLTR10B ENSMUSG00000025892.17, Gria4 DRR091691, DRR091696, SRR10697201, SRR10697203, SRR11428468, SRR13142118, SRR13142120, SRR15198217, SRR15198219, SRR15198220, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9178979, SRR9178980, SRR9178983, SRR9178989 chr9 48073320 48073405 + Annotated LTR|ERVL|LTR67B ENSMUSG00000044229.10, Nxpe4 ENSMUST00000216998.2 ENCFF001NCP, ENCFF001NCR, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF005GQR, ENCFF013CHH, ENCFF027RRZ, ENCFF033ZUH, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF148XRK, ENCFF156YWS, ENCFF199IRM, ENCFF222GPK, ENCFF233IFH, ENCFF247QZW, ENCFF251WZA, ENCFF269SRJ, ENCFF271OHB, ENCFF296VFB, ENCFF308FEA, ENCFF326UXM, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF374YTS, ENCFF377UGQ, ENCFF394BDJ, ENCFF448TTG, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF510TTU, ENCFF533DWD, ENCFF572TOH, ENCFF587VDB, ENCFF595WXV, ENCFF632LPV, ENCFF636NES, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF694NRG, ENCFF721BNO, ENCFF725ATS, ENCFF728TXU, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF766LGO, ENCFF775SSI, ENCFF818BAS, ENCFF822PGJ, ENCFF831ISX, ENCFF854MWX, ENCFF860XMD, ENCFF886BRO, ENCFF912MUD, ENCFF914YDJ, ENCFF923VUD, ENCFF924LPZ, ENCFF962OCF, ENCFF967NOO, ENCFF008XVO, ENCFF075EMK, ENCFF119IHT, ENCFF242SVY, ENCFF269AST, ENCFF306ADU, ENCFF399XUL, ENCFF499CDP, ENCFF510AYI, ENCFF510IAG, ENCFF525QIM, ENCFF555BQD, ENCFF670VVN, ENCFF728WJB, ENCFF749STK, ENCFF803OIY, ENCFF847LGC, ENCFF911OIZ, ENCFF932SOZ, ENCFF970VKL, SRR11428467, SRR11428468, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR9080666, SRR9178991 chr9 48273341 48273342 + Annotated LTR|ERV1|RMER5 ENSMUSG00000044229.10, Nxpe4 ENSMUST00000093853.5, NM_172921.3 ENCFF001NDZ, ENCFF001NEC, ENCFF002ERU, ENCFF002ERW, ENCFF426QFT, ENCFF452AXW, ENCFF489IGD, ENCFF575RUC, ENCFF793IYH, ENCFF874ELO, ENCFF302KQL, ENCFF383AJS chr9 48407582 48407584 - Predicted SINE|B4|ID_B1 ENSMUSG00000042396.11, Rbm7 ENCFF106RGV, ENCFF163LPQ, ENCFF308LTO, ENCFF363CYZ, ENCFF017LOD, ENCFF296VFB, ENCFF379TZT, ENCFF444YCN, ENCFF448TTG, ENCFF487DYP, ENCFF532UKS, ENCFF744OEI, ENCFF964WZW, ENCFF673GRZ, ENCFF938CNS, ENCFF014SLC chr9 49399318 49399319 - Predicted LINE|CR1|L3b ENSMUSG00000040219.5, Ttc12 DRR091689, DRR091694, SRR10697202, SRR15198221, SRR15198223, SRR15198227, SRR9178977, SRR9178980, SRR9178984, SRR9178986, SRR9178988, SRR9178991, SRR9178992 chr9 5127218 5127219 + Predicted LTR|ERVK|RLTR9A3B ENSMUSG00000025888.7, Casp1 DRR091695, DRR091697, SRR10697195, SRR11428470, SRR15198223, SRR15198227 chr9 51787184 51787186 - Annotated LTR|ERVL-MaLR|MLT1A1 ENSMUSG00000074354.12, Arhgap20os ENSMUST00000152203.8, ENSMUST00000142579.8, NR_033560.1 chr9 51825969 51825977 - Predicted LINE|L2|L2 ENSMUSG00000111357.2, Gm6980 DRR091688, DRR091690, DRR091691, DRR091693, DRR091695, DRR091696, DRR091697, DRR091699, SRR10697198, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080665, SRR9178976, SRR9178978, SRR9178981, SRR9178983, SRR9178984, SRR9178988, SRR9178989, SRR9178990 chr9 51932429 51932430 - Predicted LTR|ERVL-MaLR|MLT1F ENSMUSG00000098076.2, Gm6981 ENCFF002FAE, DRR091692, DRR091693, DRR091695, SRR13142118, SRR13142121, SRR13142123, SRR15198218, SRR2927111, SRR9080665, SRR9080666 chr9 52591075 52591080 - Annotated DNA|hAT-Tip100|MER45R ENSMUSG00000078307.4, AI593442 ENSMUST00000213937.2, NM_001286641.1 ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAG, ENCFF005GQR, ENCFF013CHH, ENCFF067UCQ, ENCFF156YWS, ENCFF222GPK, ENCFF247QZW, ENCFF271OHB, ENCFF296VFB, ENCFF308FEA, ENCFF374YTS, ENCFF394BDJ, ENCFF408NBX, ENCFF465BBM, ENCFF468AKL, ENCFF487DYP, ENCFF533DWD, ENCFF588DUN, ENCFF595WXV, ENCFF632LPV, ENCFF636NES, ENCFF657FNE, ENCFF725ATS, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF822PGJ, ENCFF854MWX, ENCFF860XMD, ENCFF914YDJ, ENCFF269AST, ENCFF344OJQ, ENCFF399XUL, ENCFF499CDP, ENCFF510IAG, ENCFF592WZB, ENCFF670VVN, SRR15198224 chr9 5298442 5298469 + Predicted LINE|L1|L1_Mur3 ENSMUSG00000025888.7, Casp1 ENCFF040EEJ, ENCFF092YWY, ENCFF121BYS, ENCFF189WYV, ENCFF450WAV, ENCFF480BVV, ENCFF906FNQ, ENCFF931PFF, ENCFF061WTN, ENCFF089SWU, ENCFF316EEH, ENCFF552KEA, ENCFF698XCB, ENCFF713JXV, ENCFF951PCM chr9 54461805 54461806 - Predicted LINE|L2|AmnL2-1 ENSMUSG00000037493.7, Cib2 ENCFF002EZW, ENCFF002EZY, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF027RRZ, ENCFF060JCS, ENCFF234LUQ, ENCFF247QZW, ENCFF326UXM, ENCFF335ZSA, ENCFF478KOR, ENCFF595WXV, ENCFF608LAL, ENCFF642YTY, ENCFF657OJR, ENCFF809FPA, ENCFF818BAS, ENCFF967NOO, ENCFF178HDG, ENCFF592WZB, ENCFF733LFV, ENCFF888IIL, SRR6338004 chr9 54464503 54464504 - Predicted SINE|MIR|MIRc ENSMUSG00000037493.7, Cib2 DRR091688, DRR091694, DRR091696, SRR10697195, SRR10697198, SRR10697201, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR15198218, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198227, SRR2040601, SRR2927111, SRR2927113, SRR9080666, SRR9178978, SRR9178979, SRR9178983, SRR9178984, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 55119843 55119844 + Predicted SINE|MIR|MIRb ENSMUSG00000032309.16, Fbxo22 ENCFF105KSL, ENCFF108UNS, ENCFF494YXM, ENCFF535YBP, ENCFF723KAG, ENCFF884DLS, ENCFF906FNQ, ENCFF065UBR, ENCFF107YGR, ENCFF167GWU, ENCFF184ALY, ENCFF301VMF, ENCFF310HAL, ENCFF343MZH, ENCFF346NGU, ENCFF598BFX, ENCFF724VJN, ENCFF803ZUN, ENCFF818ZJQ, ENCFF934QGX, ENCFF984QED chr9 55232470 55232471 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000032311.18, Nrg4 ENSMUST00000133659.2 chr9 57036871 57036872 + Predicted SINE|Alu|B1_Mm ENSMUSG00000032295.16, Man2c1 ENCFF075MGH, ENCFF560YXX, ENCFF727WWV, ENCFF773VFS, ENCFF013CHH, ENCFF013HYW, ENCFF510TTU, ENCFF914YDJ, ENCFF141YUD, ENCFF177LXI, ENCFF194DAO, ENCFF260UQJ, ENCFF307OHZ, ENCFF378TYU, ENCFF399TOF, ENCFF794MMU, ENCFF840DKD, ENCFF903KDM, ENCFF932XKS, ENCFF442OKF, ENCFF477YHR, SRR11428468, SRR15198227, SRR15198228 chr9 57553589 57553590 - Predicted SINE|Alu|B1_Mur1 ENSMUSG00000032312.8, Csk ENCFF138TOM, ENCFF162UVS, ENCFF319INV, ENCFF348VIH, ENCFF486NGU, ENCFF581WWO, ENCFF698LQF, ENCFF913CFN, ENCFF043DTH, ENCFF087OKI, ENCFF140WZW, ENCFF239RQP, ENCFF242MZE, ENCFF358UHV, ENCFF420REU, ENCFF423GTP, ENCFF433QNW, ENCFF498OHV, ENCFF772QLP, ENCFF994JUO chr9 57675216 57675438 - Predicted LTR|ERVL|MERVL-int ENSMUSG00000032316.9, Clk3 ENCFF002EZU, ENCFF002EZW, ENCFF002FAI, ENCFF074HTO, ENCFF104LLO, ENCFF140VGY, ENCFF142CUS, ENCFF178PMH, ENCFF251TMY, ENCFF296ASE, ENCFF297BEX, ENCFF310HPH, ENCFF345OIF, ENCFF392TDB, ENCFF495YGN, ENCFF504ULZ, ENCFF548SLN, ENCFF623BKO, ENCFF707QJV, ENCFF743QXJ, ENCFF771LLL, ENCFF789LUC, ENCFF808XFI, ENCFF851ESH, ENCFF878SQO, ENCFF956WVJ, ENCFF970JWC, ENCFF991TPB, ENCFF013CHH, ENCFF033ZUH, ENCFF060JCS, ENCFF065TCZ, ENCFF067UCQ, ENCFF134HVE, ENCFF148XRK, ENCFF151YNV, ENCFF170XMM, ENCFF199IRM, ENCFF222GPK, ENCFF236TUH, ENCFF245ZOR, ENCFF261ZZF, ENCFF270ERO, ENCFF271OHB, ENCFF296VFB, ENCFF308FEA, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF377UGQ, ENCFF391UFN, ENCFF408NBX, ENCFF429BQZ, ENCFF444YCN, ENCFF454ZUS, ENCFF465BBM, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF510TTU, ENCFF516BTG, ENCFF533DWD, ENCFF573UIH, ENCFF588DUN, ENCFF590LNP, ENCFF596QWT, ENCFF604SXL, ENCFF632LPV, ENCFF647TTU, ENCFF654AEJ, ENCFF657FNE, ENCFF657UWH, ENCFF667SYQ, ENCFF704WWK, ENCFF721ASG, ENCFF721BNO, ENCFF725ATS, ENCFF744OEI, ENCFF747XPP, ENCFF766LGO, ENCFF768ZCF, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF808PVJ, ENCFF829RHM, ENCFF854MWX, ENCFF855FCX, ENCFF860XMD, ENCFF914YDJ, ENCFF920FVY, ENCFF923VUD, ENCFF939IUH, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF027GBM, ENCFF118YHP, ENCFF158HQO, ENCFF194DAO, ENCFF205CDI, ENCFF237JCE, ENCFF268ZHE, ENCFF279EVY, ENCFF315HBU, ENCFF315OFF, ENCFF369VAI, ENCFF377OQI, ENCFF378TYU, ENCFF397ZQU, ENCFF406NLL, ENCFF426ETE, ENCFF429ZEH, ENCFF456GLS, ENCFF505WKA, ENCFF541HSQ, ENCFF591WVP, ENCFF596INO, ENCFF633QXI, ENCFF644EGG, ENCFF655CUI, ENCFF661TOM, ENCFF698WQO, ENCFF751QWY, ENCFF859MTL, ENCFF867FTP, ENCFF869DVY, ENCFF877VSZ, ENCFF949QCF, ENCFF994PPZ, ENCFF997QQG, ENCFF008XVO, ENCFF014SLC, ENCFF075EMK, ENCFF160TQC, ENCFF254YNR, ENCFF269AST, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF399XUL, ENCFF423TSB, ENCFF499CDP, ENCFF510IAG, ENCFF525QIM, ENCFF592WZB, ENCFF626KIV, ENCFF705HQV, ENCFF728WJB, ENCFF783KGQ, ENCFF847LGC, DRR091695, SRR10697195, SRR10697200, SRR10697202, SRR11428470, SRR13142120, SRR15198228, SRR9080662, SRR9080663, SRR9080665, SRR9178977, SRR9178987, SRR9178988, SRR9178991 chr9 58065792 58065837 - Annotated SINE|MIR|MIR3 ENSMUSG00000037206.16, Islr ENSMUST00000168864.4, NM_001195431.1 ENCFF002EZU, ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAE, ENCFF002FAG, ENCFF002FAI, ENCFF013CHH, ENCFF027RRZ, ENCFF033ZUH, ENCFF052WUB, ENCFF060JCS, ENCFF065LOT, ENCFF065TCZ, ENCFF067UCQ, ENCFF101BDM, ENCFF115LWP, ENCFF134HVE, ENCFF151YNV, ENCFF170XMM, ENCFF199IRM, ENCFF199ZDO, ENCFF222GPK, ENCFF236TUH, ENCFF245ZOR, ENCFF247QZW, ENCFF251WZA, ENCFF261ZZF, ENCFF270ERO, ENCFF284AEN, ENCFF296VFB, ENCFF304DLW, ENCFF308FEA, ENCFF315OOH, ENCFF330FNX, ENCFF335ZSA, ENCFF339MSB, ENCFF364LFJ, ENCFF369YLA, ENCFF374YTS, ENCFF377LAC, ENCFF390NKP, ENCFF391UFN, ENCFF394BDJ, ENCFF429BQZ, ENCFF444YCN, ENCFF446FOZ, ENCFF448TTG, ENCFF467LJD, ENCFF484HRX, ENCFF487DYP, ENCFF510LAE, ENCFF510TTU, ENCFF516BTG, ENCFF519YGA, ENCFF572TOH, ENCFF573UIH, ENCFF581KUX, ENCFF587VDB, ENCFF588DUN, ENCFF596QWT, ENCFF604SXL, ENCFF609KQB, ENCFF632LPV, ENCFF642YTY, ENCFF643XFK, ENCFF654AEJ, ENCFF657FNE, ENCFF657UWH, ENCFF667SYQ, ENCFF670FEL, ENCFF683CWD, ENCFF686KMX, ENCFF694NRG, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF725ATS, ENCFF728TXU, ENCFF737OUQ, ENCFF744OEI, ENCFF747XPP, ENCFF754TOT, ENCFF756QCA, ENCFF766LGO, ENCFF768ZCF, ENCFF775SSI, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF829RHM, ENCFF840XYZ, ENCFF854KNE, ENCFF854MWX, ENCFF855FCX, ENCFF868WEJ, ENCFF912MUD, ENCFF920FVY, ENCFF923VUD, ENCFF933MOZ, ENCFF939IUH, ENCFF943XKB, ENCFF952BCB, ENCFF962FIU, ENCFF962OCF, ENCFF964WZW, ENCFF075EMK, ENCFF160TQC, ENCFF197NCG, ENCFF199IWW, ENCFF269AST, ENCFF277QHC, ENCFF306ADU, ENCFF319SDE, ENCFF342GAL, ENCFF344OJQ, ENCFF361MLD, ENCFF399XUL, ENCFF423TSB, ENCFF446LMP, ENCFF454JTI, ENCFF481CFU, ENCFF499CDP, ENCFF510IAG, ENCFF517DCU, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF667KKO, ENCFF705HQV, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF782WDV, ENCFF888IIL, ENCFF911OIZ, DRR091689, SRR15198219, SRR15198227, SRR2040601, SRR2927111, SRR2927112 chr9 58554973 58554974 + Predicted SINE|B4|ID_B1 ENSMUSG00000032336.18, Nptn ENCFF312CZB, ENCFF519IZA, ENCFF386HCR, ENCFF687GPO, ENCFF712EKU, ENCFF934QGX, ENCFF951GZB, ENCFF904RJF chr9 58566574 58566575 - Annotated DNA|hAT-Charlie|Charlie1a ENSMUSG00000074269.11, Rec114 ENSMUST00000175792.8 chr9 58571551 58571552 - Annotated LINE|L1|Lx10 ENSMUSG00000074269.11, Rec114 ENSMUST00000187632.2 SRR9178985 chr9 59615047 59615048 + Annotated LINE|L1|L1ME3G ENSMUSG00000074259.11, Gramd2 ENSMUST00000098661.10, NM_001033498.2 ENCFF023MKT, ENCFF455DHP chr9 60241425 60241426 + Annotated LTR|ERVL-MaLR|MTE2a ENSMUSG00000111296.2, 2010001M07Rik ENSMUST00000214235.2 chr9 63948746 63948747 - Annotated LTR|ERVL-MaLR|MLT1D ENSMUSG00000093616.2, 1700055C04Rik ENSMUST00000176450.2, NR_040726.1 SRR15198221, SRR15198222, SRR15198225, SRR15198227 chr9 64879256 64879257 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000034263.14, Ints14 ENCFF002DMZ, ENCFF051JGE, ENCFF192NVI, ENCFF327MSM, ENCFF570KYE, ENCFF836JVX, ENCFF888LGA, ENCFF197OUM, ENCFF302KQL, ENCFF383AJS, ENCFF407JTK, ENCFF655CUI, ENCFF689ZLL, ENCFF790WIY, SRR3178204, SRR3178205 chr9 65253169 65253170 + Predicted LTR|ERV1|RMER2 ENSMUSG00000041837.5, Pdcd7 ENCFF048IBL, ENCFF114PSQ, ENCFF420RFN, ENCFF364LFJ, ENCFF721BNO, ENCFF923VUD, ENCFF143RTP, ENCFF194DAO, ENCFF406NLL, ENCFF476JSK, DRR091688, DRR091691, DRR091697, SRR9178977, SRR9178978, SRR9178979, SRR9178986, SRR9178988 chr9 65486315 65486316 - Annotated SINE|MIR|MIR3 ENSMUSG00000050721.10, Plekho2 ENSMUST00000214740.2 chr9 66501151 66501182 - Predicted SINE|MIR|MIRb ENSMUSG00000032376.13, Usp3 ENCFF001RTD, ENCFF051PTY, ENCFF074HTO, ENCFF116MYR, ENCFF351JWR, ENCFF450WAV, ENCFF482MUH, ENCFF489VZI, ENCFF548SLN, ENCFF683RFI, ENCFF743QXJ, ENCFF828WIK, ENCFF841OXD, ENCFF934ZAP, ENCFF065TCZ, ENCFF148XRK, ENCFF156YWS, ENCFF247QZW, ENCFF269SRJ, ENCFF271OHB, ENCFF335ZSA, ENCFF348FTH, ENCFF355AMN, ENCFF374YTS, ENCFF377UGQ, ENCFF468AKL, ENCFF500QZK, ENCFF516BTG, ENCFF572TOH, ENCFF587VDB, ENCFF632LPV, ENCFF636NES, ENCFF643XFK, ENCFF647TTU, ENCFF654AEJ, ENCFF721BNO, ENCFF733MXU, ENCFF747XPP, ENCFF785TEQ, ENCFF818BAS, ENCFF831ISX, ENCFF854MWX, ENCFF962FIU, ENCFF967NOO, ENCFF023TPS, ENCFF073RJJ, ENCFF156XMZ, ENCFF163DKN, ENCFF178ZXW, ENCFF194DAO, ENCFF205CDI, ENCFF505WKA, ENCFF581RIR, ENCFF598WAL, ENCFF614WCH, ENCFF766UJI, ENCFF994PPZ, ENCFF319SDE, ENCFF499CDP, ENCFF803OIY, ENCFF911OIZ, ENCFF970VKL, DRR091688, DRR091691, DRR091695, DRR091699, SRR13142118, SRR13142119, SRR15198217, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198228, SRR9178976, SRR9178977, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178984, SRR9178985, SRR9178987, SRR9178988, SRR9178989, SRR9178991, SRR9178992 chr9 66711459 66711460 - Predicted LTR|ERVL|MT2A ENSMUSG00000092131.2, BC050972 SRR6904683, SRR6904684, SRR6904685 chr9 66711616 66711641 - Annotated LTR|ERVL-MaLR|MTE2a ENSMUSG00000092131.2, BC050972 ENSMUST00000169153.2 DRR091690, DRR091693, DRR091695, DRR091698, DRR091699, SRR10697195, SRR10697201, SRR10697203, SRR13142120, SRR15198217, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR3178204, SRR3178206, SRR5643190, SRR5643191, SRR5643199, SRR6904685, SRR9080662, SRR9080663, SRR9080664, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178987, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 67160330 67160331 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000052698.16, Tln2 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chr9 68672628 68672629 + Annotated SINE|B4|B4A NR_033299.1 chr9 69904364 69904365 + Predicted LINE|CR1|L3 ENSMUSG00000011958.18, Bnip2 ENCFF106GQS, ENCFF198RBJ, ENCFF327MSM, ENCFF575RUC, ENCFF689ZLL, SRR5643190, SRR6904685 chr9 69925843 69925844 + Predicted SINE|Alu|B1_Mus1 ENSMUSG00000033543.18, Gtf2a2 ENCFF792XYG, ENCFF812CUD, ENCFF876MJS, ENCFF714CKE, ENCFF043DTH, ENCFF106RLX, ENCFF240OIM, ENCFF422ZNC, ENCFF505YPK, ENCFF517BAY, ENCFF527XBQ, ENCFF537DSI, ENCFF804EWD, ENCFF881YOK, ENCFF974XWJ chr9 69947980 69947999 - Predicted LTR|ERVL|LTR50 ENSMUSG00000032226.6, Gcnt3 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142122, SRR15198217, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178992 chr9 70449005 70449011 + Predicted LTR|ERVK|RMER17C ENSMUSG00000032212.11, Sltm ENCFF013CHH, ENCFF148XRK, ENCFF308FEA, ENCFF355AMN, ENCFF604SXL, ENCFF747XPP, DRR091689, DRR091698, SRR10697202, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198222, SRR15198224, SRR15198227, SRR15198228, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178979, SRR9178984, SRR9178986, SRR9178989, SRR9178990 chr9 71870264 71870265 - Predicted SINE|B4|B4A ENSMUSG00000032228.17, Tcf12 SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089616, SRR2089618, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr9 72222413 72222414 + Annotated LINE|L1|L1MA6 ENSMUSG00000102225.2, Gm37983 ENSMUST00000193207.2 chr9 73002102 73002116 + Annotated LTR|ERVL-MaLR|MLT1L ENSMUSG00000032202.12, Rab27a ENSMUST00000184032.2 DRR091688, DRR091691, DRR091692, DRR091693, DRR091698, DRR091699, SRR10697197, SRR10697202, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601 chr9 75317906 75317914 + Predicted SINE|Alu|B1_Mur2 ENSMUSG00000042487.7, ENSMUSG00000097021.8, Leo1, 4933433G15Rik ENCFF505YPK, ENCFF881DTW, DRR091688, DRR091690, DRR091692, DRR091693, DRR091694, DRR091697, DRR091698, SRR10697196, SRR11428470, SRR15198217, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927113, SRR9178976, SRR9178981, SRR9178982, SRR9178984 chr9 75375855 75375899 + Annotated LTR|ERVL|LTR50 ENSMUSG00000121476.1, ENSMUSG00000121476 ENSMUST00000243938.1, ENSMUST00000208453.2, NM_001373998.1 ENCFF001NDD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, SRR10697200, SRR11428467, SRR11428468, SRR13142118, SRR15198217, SRR15198221, SRR15198222, SRR15198224, SRR15198228, SRR2040601, SRR2927113 chr9 7574960 7574961 + Predicted LINE|L1|L1MdA_VII ENSMUSG00000070323.12, Mmp27 ENCFF040EEJ, ENCFF277XPM, ENCFF107YGR, ENCFF177LXI, ENCFF315HBU, ENCFF598PMW, ENCFF812QQI, ENCFF910CTW, ENCFF944RHJ chr9 76662049 76662070 + Annotated LTR|ERVK|RMER19B2 ENSMUSG00000111222.2, Gm34158 ENSMUST00000216390.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697199, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198225, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9178976, SRR9178978, SRR9178979, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178988, SRR9178990, SRR9178991 chr9 76730342 76730345 - Annotated LINE|L1|Lx8b ENSMUSG00000110839.2, Gm47800 ENSMUST00000214015.2 DRR091690, DRR091691, DRR091695, DRR091699, SRR10697203, SRR11428468, SRR11428469, SRR11428470, SRR15198217, SRR15198218, SRR15198219, SRR15198224, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR9178976, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178991, SRR9178992 chr9 77255074 77255198 - Annotated DNA|hAT-Tip100|hAT-4b_Ther ENSMUSG00000032355.17, Mlip ENSMUST00000185144.8, ENSMUST00000034910.16, ENSMUST00000184848.8, ENSMUST00000184415.8, ENSMUST00000185039.8, ENSMUST00000184006.8, ENSMUST00000184138.8, NM_001368972.1, NM_001368973.1, NM_001368989.1, NM_001368974.1, NM_001368977.1, NM_001368980.1, NM_001368982.1, NM_001368978.1, NM_001368985.1, NM_001368975.1, NM_001368981.1, NM_001368986.1, NM_001368976.1, NM_001368983.1, NM_001368979.1, NM_001368987.1, NM_001368984.1, NM_001368988.1, NM_027150.1 ENCFF002FAA, ENCFF002FAC, ENCFF052WUB, ENCFF060JCS, ENCFF067UCQ, ENCFF134HVE, ENCFF151YNV, ENCFF170XMM, ENCFF236TUH, ENCFF245ZOR, ENCFF261ZZF, ENCFF270ERO, ENCFF304DLW, ENCFF369YLA, ENCFF377LAC, ENCFF390NKP, ENCFF391UFN, ENCFF429BQZ, ENCFF444YCN, ENCFF467LJD, ENCFF484HRX, ENCFF516BTG, ENCFF519YGA, ENCFF588DUN, ENCFF590LNP, ENCFF592GVA, ENCFF596QWT, ENCFF604SXL, ENCFF642YTY, ENCFF643XFK, ENCFF657UWH, ENCFF686KMX, ENCFF704WWK, ENCFF714CKE, ENCFF721ASG, ENCFF756QCA, ENCFF768ZCF, ENCFF782NPY, ENCFF785TEQ, ENCFF803VZZ, ENCFF804UQS, ENCFF808PVJ, ENCFF829RHM, ENCFF840XYZ, ENCFF855FCX, ENCFF868WEJ, ENCFF920FVY, ENCFF939IUH, ENCFF962FIU, ENCFF964WZW, ENCFF978EQI, ENCFF160TQC, ENCFF199IWW, ENCFF254YNR, ENCFF277QHC, ENCFF319SDE, ENCFF344OJQ, ENCFF361MLD, ENCFF423TSB, ENCFF446LMP, ENCFF517DCU, ENCFF569XGG, ENCFF592WZB, ENCFF626KIV, ENCFF641WPY, ENCFF705HQV, ENCFF716YKR, ENCFF723MAR, ENCFF728WJB, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF888IIL chr9 77264634 77264635 + Annotated LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000103794.2, 4930590H14Rik ENSMUST00000193999.2 DRR091699, SRR15198228, SRR2927112 chr9 78067652 78067653 + Predicted LTR|ERVK|RMER12C ENSMUSG00000009828.16, Cilk1 ENCFF002DMZ, ENCFF808XFI, ENCFF643SBQ chr9 78383128 78383129 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000037742.15, Eef1a1 ENCFF101BDM, ENCFF455DHP, ENCFF654AEJ chr9 79573689 79573691 + Predicted LINE|L1|Lx3B ENSMUSG00000086608.2, ENSMUSG00000086918.3, 4930562D21Rik, 4930429F24Rik SRR2089610, SRR2089611, SRR2089614, SRR2089616, SRR2089617, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089637, SRR2089639, SRR2089641, SRR2089643, SRR2089647, SRR2089650, SRR2089651 chr9 79574874 79574875 + Predicted LINE|L1|Lx3B ENSMUSG00000086608.2, ENSMUSG00000086918.3, 4930562D21Rik, 4930429F24Rik SRR2089603, SRR2089621, SRR2089623, SRR2089635, SRR2089645, SRR2089649, SRR2089650, SRR2089651 chr9 79576134 79576135 + Predicted LINE|L1|Lx3B ENSMUSG00000086608.2, ENSMUSG00000086918.3, 4930562D21Rik, 4930429F24Rik SRR2089611, SRR2089629, SRR2089651 chr9 79596058 79596093 + Annotated LINE|L1|Lx8 ENSMUSG00000086608.2, 4930562D21Rik ENSMUST00000123894.2 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR9080662, SRR9080663, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178985, SRR9178986, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 7965821 7965848 - Annotated SINE|B2|B3A ENSMUSG00000053110.14, ENSMUSG00000092185.2, Yap1, Gm20416 ENSMUST00000174127.2, ENSMUST00000174760.2 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR3178203, SRR3178204, SRR3178205, SRR3178206, SRR6338004, SRR9080663, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 81654036 81654037 - Predicted LTR|ERVK|RMER6D ENSMUSG00000097241.3, Gm26907 SRR2089609, SRR2089623, SRR2089636 chr9 82890656 82890657 + Annotated LTR|ERVL|RMER15 ENSMUSG00000111839.2, Gm39383 ENSMUST00000216894.2 ENCFF935LAF, ENCFF945ICZ, ENCFF062GNP, ENCFF186VNL, ENCFF248ELC, ENCFF260KJY, ENCFF349AIG, ENCFF499GDC, ENCFF574YMK, ENCFF720MPJ, ENCFF854IBU chr9 83313582 83313601 + Annotated SINE|B4|B4A ENSMUSG00000099718.2, Gm2087 ENSMUST00000188217.2, NR_102437.1 DRR091688, DRR091689, DRR091690, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697196, SRR10697198, SRR10697199, SRR10697203, SRR11428469, SRR15198221, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643190, SRR9178976, SRR9178977, SRR9178978, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 83830312 83830313 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000032263.15, Bckdhb ENCFF581WWO, ENCFF641QXI, ENCFF745HSV, ENCFF784LWT, ENCFF027GCQ, ENCFF118YHP, ENCFF433QNW, ENCFF497KLL, ENCFF647KBV, ENCFF759HJA, ENCFF821HAZ, ENCFF932XKS, ENCFF962ZCT, SRR11428467, SRR15198225, SRR2927112 chr9 83830691 83830782 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000032263.15, Bckdhb ENCFF001RTN, ENCFF002ERW, ENCFF040EEJ, ENCFF076CCZ, ENCFF086ZMV, ENCFF102AMK, ENCFF107XGE, ENCFF138TOM, ENCFF147GLI, ENCFF151QHP, ENCFF162UVS, ENCFF192NVI, ENCFF262URV, ENCFF284OMO, ENCFF289WHW, ENCFF321BMO, ENCFF331WKS, ENCFF352VWM, ENCFF376MQF, ENCFF379JPQ, ENCFF415KCJ, ENCFF453XOG, ENCFF497YRP, ENCFF540XSD, ENCFF552DRF, ENCFF560YXX, ENCFF570GTP, ENCFF605IFN, ENCFF608NVM, ENCFF670YKO, ENCFF704GEB, ENCFF705JRV, ENCFF707QJV, ENCFF727WWV, ENCFF771LLL, ENCFF787LWL, ENCFF793CWJ, ENCFF795DLS, ENCFF828WIK, ENCFF858CTQ, ENCFF863RVB, ENCFF868XLZ, ENCFF876MJS, ENCFF881UBL, ENCFF883UYA, ENCFF896MQK, ENCFF913CFN, ENCFF924VRI, ENCFF931DDH, ENCFF942WIP, ENCFF982BLT, ENCFF923VUD, ENCFF012HVN, ENCFF019PVP, ENCFF022ACG, ENCFF035BBA, ENCFF068CQU, ENCFF080BTV, ENCFF087XKQ, ENCFF089SWU, ENCFF098AYQ, ENCFF106GHS, ENCFF121IDD, ENCFF127KHN, ENCFF134VWD, ENCFF166UTY, ENCFF184ALY, ENCFF194DAO, ENCFF209LBA, ENCFF209RRO, ENCFF210BVU, ENCFF228CMT, ENCFF237JCE, ENCFF255ESE, ENCFF256UWN, ENCFF264PYB, ENCFF297PPT, ENCFF306FQJ, ENCFF315HBU, ENCFF324ITL, ENCFF332RWQ, ENCFF347EUO, ENCFF358UHV, ENCFF374VAZ, ENCFF397ZQU, ENCFF399TOF, ENCFF403RPK, ENCFF406NLL, ENCFF407JTK, ENCFF414IHO, ENCFF420REU, ENCFF420RGI, ENCFF421DHQ, ENCFF437QAE, ENCFF437ZSM, ENCFF464KYQ, ENCFF470RDW, ENCFF485GFE, ENCFF486BJT, ENCFF498OHV, ENCFF504PGI, ENCFF507VMW, ENCFF512LAN, ENCFF517BAY, ENCFF524FJG, ENCFF524PAV, ENCFF529YFS, ENCFF533ZIO, ENCFF561CZI, ENCFF578YPJ, ENCFF591WVP, ENCFF595NMM, ENCFF618PVF, ENCFF640RWH, ENCFF644EGG, ENCFF646GBS, ENCFF655CUI, ENCFF657NUT, ENCFF663SPA, ENCFF669PMR, ENCFF673SLO, ENCFF678CRA, ENCFF680OWA, ENCFF685GDB, ENCFF695XIY, ENCFF711XWR, ENCFF724VJN, ENCFF758BKM, ENCFF758IOS, ENCFF759WDO, ENCFF772QLP, ENCFF781XUM, ENCFF794MMU, ENCFF814TTQ, ENCFF817HZQ, ENCFF817NCH, ENCFF845NUY, ENCFF853PNO, ENCFF854LJN, ENCFF858OFI, ENCFF885ZAO, ENCFF896XAZ, ENCFF908MGO, ENCFF916JWW, ENCFF917KUH, ENCFF952FJN, ENCFF953FGT, ENCFF958FDX, ENCFF964HGL, ENCFF974XWJ, ENCFF986DZE, DRR091688, DRR091689, DRR091690, DRR091693, DRR091694, DRR091697, DRR091698, DRR091699, SRR15198219, SRR15198222 chr9 83830835 83830848 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000032263.15, Bckdhb ENSMUST00000190166.7, NM_199195.1 ENCFF001RTN, ENCFF002ERW, ENCFF086ZMV, ENCFF107XGE, ENCFF147GLI, ENCFF192NVI, ENCFF321BMO, ENCFF331WKS, ENCFF352VWM, ENCFF415KCJ, ENCFF453XOG, ENCFF522VLI, ENCFF552DRF, ENCFF605IFN, ENCFF608NVM, ENCFF704GEB, ENCFF707QJV, ENCFF727WWV, ENCFF858CTQ, ENCFF863RVB, ENCFF868XLZ, ENCFF876MJS, ENCFF883UYA, ENCFF896MQK, ENCFF931DDH, ENCFF942WIP, ENCFF982BLT, ENCFF728TXU, ENCFF923VUD, ENCFF035BBA, ENCFF068CQU, ENCFF080BTV, ENCFF089SWU, ENCFF098AYQ, ENCFF106GHS, ENCFF166UTY, ENCFF194DAO, ENCFF256UWN, ENCFF297PPT, ENCFF315HBU, ENCFF347EUO, ENCFF374VAZ, ENCFF397ZQU, ENCFF399TOF, ENCFF403RPK, ENCFF406NLL, ENCFF437QAE, ENCFF464KYQ, ENCFF486BJT, ENCFF529YFS, ENCFF533ZIO, ENCFF561CZI, ENCFF578YPJ, ENCFF591WVP, ENCFF595NMM, ENCFF640RWH, ENCFF644EGG, ENCFF646GBS, ENCFF655CUI, ENCFF663SPA, ENCFF669PMR, ENCFF724VJN, ENCFF758IOS, ENCFF759WDO, ENCFF885ZAO, ENCFF916JWW, ENCFF952FJN, ENCFF953FGT, ENCFF349AIG, DRR091688, DRR091689, DRR091690, DRR091693, DRR091694, DRR091697, DRR091698, DRR091699, SRR15198219, SRR15198222 chr9 85230116 85230118 - Annotated LTR|ERVL|RMER15-int ENSMUSG00000111840.2, Gm48832 ENSMUST00000214276.2, ENSMUST00000214073.2 chr9 86308516 86308517 - Predicted LTR|ERVL-MaLR|MTC ENSMUSG00000032415.15, Ube2cbp SRR2089614, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chr9 86569329 86569330 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000032418.16, Me1 ENSMUST00000185374.2, NM_001198933.1 chr9 88426482 88426483 + Predicted LINE|L1|Lx3_Mus ENSMUSG00000032425.16, Zfp949 SRR2089603, SRR2089604, SRR2089607, SRR2089614, SRR2089618, SRR2089620, SRR2089621, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089634, SRR2089641 chr9 88602719 88602720 - Predicted SINE|B2|B2_Mm1a ENSMUSG00000079427.11, Mthfsl ENCFF002EZU, ENCFF126HTW, ENCFF013CHH, ENCFF148XRK, ENCFF199IRM, ENCFF359GCY, ENCFF468AKL, ENCFF478KOR, ENCFF487DYP, ENCFF500QZK, ENCFF595WXV, ENCFF632LPV, ENCFF647TTU, ENCFF733MXU, ENCFF744OEI, ENCFF747XPP, ENCFF935LAF, ENCFF311MZV, ENCFF921PGH, ENCFF008XVO, ENCFF499CDP, ENCFF510AYI, ENCFF720MPJ, ENCFF728WJB, SRR15198217, SRR15198222 chr9 88704365 88704366 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000097677.2, Gm26611 ENCFF199IRM, ENCFF296VFB, ENCFF465BBM, ENCFF587VDB, ENCFF008XVO, ENCFF574YMK chr9 8899435 8899436 + Predicted SINE|B2|B3A ENSMUSG00000031870.17, Pgr ENCFF002EZU, ENCFF002EZY, ENCFF002FAE, ENCFF247QZW, ENCFF377UGQ, ENCFF379TZT, ENCFF448TTG, ENCFF487DYP, ENCFF721BNO, ENCFF733MXU, ENCFF886BRO, ENCFF008XVO, ENCFF510AYI, ENCFF749STK chr9 89034105 89034106 - Predicted LINE|Penelope|Penelope1_Vert ENSMUSG00000074146.10, 4930579C12Rik SRR15198217, SRR15198227, SRR2040601, SRR2927111 chr9 89130537 89130602 + Predicted LTR|ERVL-MaLR|ORR1B2 ENSMUSG00000066442.18, Mthfs ENCFF051JSS, ENCFF104LLO, ENCFF142CUS, ENCFF178PMH, ENCFF274WSX, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF351JWR, ENCFF375EMG, ENCFF470MXU, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF564OKH, ENCFF595GFM, ENCFF841OXD, ENCFF851ESH, ENCFF878SQO, ENCFF996STG, ENCFF023TPS, ENCFF057FFG, ENCFF070YMI, ENCFF080REY, ENCFF094RHV, ENCFF120SMK, ENCFF172DMS, ENCFF177SGB, ENCFF187BHR, ENCFF205CDI, ENCFF278JAU, ENCFF306OWL, ENCFF315OFF, ENCFF320CXH, ENCFF338LFG, ENCFF343MIX, ENCFF357QTB, ENCFF369VAI, ENCFF380BYT, ENCFF390ZZH, ENCFF408FFP, ENCFF426ETE, ENCFF430ERW, ENCFF487OHM, ENCFF530DUT, ENCFF598WAL, ENCFF637CVI, ENCFF689RQK, ENCFF716NXU, ENCFF727EPG, ENCFF751QWY, ENCFF766UJI, ENCFF806XNV, ENCFF830CBI, ENCFF834TQY, ENCFF838BEV, ENCFF869DVY, ENCFF871CMC, ENCFF877VSZ, ENCFF886UAF, ENCFF921PGH, ENCFF952LUC, ENCFF953WBM, ENCFF966VVA, ENCFF970LRH, ENCFF983GRF, ENCFF994PPZ chr9 92131750 92131840 + Annotated DNA|hAT-Charlie|MER5A ENSMUSG00000032369.14, Plscr1 ENSMUST00000093801.10 ENCFF051JSS, ENCFF051PTY, ENCFF074HTO, ENCFF082HKQ, ENCFF084PUC, ENCFF094CCP, ENCFF104LLO, ENCFF106RGV, ENCFF116MYR, ENCFF121OLG, ENCFF125HRQ, ENCFF126HTW, ENCFF142CUS, ENCFF178PMH, ENCFF186RYS, ENCFF261OTH, ENCFF273TLO, ENCFF283XKV, ENCFF287KDR, ENCFF296ASE, ENCFF297BEX, ENCFF305IXM, ENCFF310HPH, ENCFF321BMO, ENCFF331WKS, ENCFF345OIF, ENCFF351JWR, ENCFF422ATU, ENCFF443PSO, ENCFF470MXU, ENCFF478FDA, ENCFF482MUH, ENCFF495SQR, ENCFF495YGN, ENCFF504ULZ, ENCFF514BEA, ENCFF521UGJ, ENCFF527VIY, ENCFF548SLN, ENCFF552NWL, ENCFF564OKH, ENCFF570GTP, ENCFF585YYC, ENCFF595GFM, ENCFF622NXP, ENCFF623BKO, ENCFF625JLB, ENCFF670YKO, ENCFF683RFI, ENCFF710DAI, ENCFF743QXJ, ENCFF764TGO, ENCFF771YNG, ENCFF792XYG, ENCFF808XFI, ENCFF812CUD, ENCFF813GGJ, ENCFF851ESH, ENCFF852ZDB, ENCFF858CRT, ENCFF878SQO, ENCFF896MQK, ENCFF906FNQ, ENCFF922KQY, ENCFF933UPG, ENCFF934ZAP, ENCFF956WVJ, ENCFF960LQP, ENCFF962LFN, ENCFF989HJD, ENCFF991TPB, ENCFF002SZY, ENCFF004AEL, ENCFF015JJB, ENCFF023TPS, ENCFF027GBM, ENCFF037GFB, ENCFF043DTH, ENCFF049WBL, ENCFF055PZZ, ENCFF056UGH, ENCFF057MDU, ENCFF065UBR, ENCFF068KDU, ENCFF073RJJ, ENCFF077YZF, ENCFF080BTV, ENCFF080REY, ENCFF082BJV, ENCFF085RPW, ENCFF095NMU, ENCFF103SQR, ENCFF106GHS, ENCFF111MWQ, ENCFF118YHP, ENCFF120SMK, ENCFF121IDD, ENCFF124SSE, ENCFF126WDH, ENCFF137OYQ, ENCFF149BQJ, ENCFF149DFF, ENCFF150HVU, ENCFF156ZQH, ENCFF158HQO, ENCFF163BDT, ENCFF163DKN, ENCFF167GWU, ENCFF169JOQ, ENCFF172DMS, ENCFF177SGB, ENCFF178ZXW, ENCFF184ALY, ENCFF187BHR, ENCFF197TJB, ENCFF199AAD, ENCFF205CDI, ENCFF208BJY, ENCFF237JCE, ENCFF243LBQ, ENCFF247VEN, ENCFF248XZC, ENCFF255XDN, ENCFF268ZHE, ENCFF272VMY, ENCFF272WGJ, ENCFF273CBP, ENCFF279EVY, ENCFF296UDD, ENCFF301VMF, ENCFF302MXO, ENCFF303BIV, ENCFF306FQJ, ENCFF310HAL, ENCFF310WDZ, ENCFF315OFF, ENCFF319YFJ, ENCFF324ITL, ENCFF328TJH, ENCFF331YYO, ENCFF332IRR, ENCFF332RWQ, ENCFF341YZB, ENCFF346UBA, ENCFF348RRM, ENCFF363PDR, ENCFF369VAI, ENCFF371ZDG, ENCFF377OQI, ENCFF378TYU, ENCFF380BYT, ENCFF382VCK, ENCFF386CRY, ENCFF390ZZH, ENCFF397MUI, ENCFF399YLV, ENCFF403CRC, ENCFF408FFP, ENCFF414IHO, ENCFF420RGI, ENCFF421DHQ, ENCFF426ETE, ENCFF426FAF, ENCFF426ZCK, ENCFF427YDU, ENCFF438ROC, ENCFF439BEV, ENCFF443URE, ENCFF450CUC, ENCFF456GLS, ENCFF460VXC, ENCFF462HZM, ENCFF464KYQ, ENCFF469JWF, ENCFF470RDW, ENCFF483SQS, ENCFF486BJT, ENCFF487OHM, ENCFF497GLK, ENCFF504PGI, ENCFF505WKA, ENCFF512LAN, ENCFF515GXB, ENCFF538TFM, ENCFF541HSQ, ENCFF543PXT, ENCFF552LXG, ENCFF558UDY, ENCFF565FFU, ENCFF566HCI, ENCFF572JDP, ENCFF581RIR, ENCFF581ZWM, ENCFF584ZUK, ENCFF585CYT, ENCFF588JAU, ENCFF596INO, ENCFF598BFX, ENCFF606XHA, ENCFF611OFH, ENCFF614WCH, ENCFF615ULR, ENCFF619SKV, ENCFF627XGF, ENCFF633QXI, ENCFF635XED, ENCFF640RWH, ENCFF644EGG, ENCFF647KBV, ENCFF647RUH, ENCFF655CUI, ENCFF655KBW, ENCFF672WYO, ENCFF673GRZ, ENCFF673ZDG, ENCFF680OWA, ENCFF680WIN, ENCFF681EEO, ENCFF694EPZ, ENCFF696QTS, ENCFF698XCB, ENCFF699SBZ, ENCFF723QWN, ENCFF724VJN, ENCFF726YTS, ENCFF727JTZ, ENCFF735BVR, ENCFF740WXS, ENCFF742DJH, ENCFF743NNG, ENCFF751QWY, ENCFF757JMT, ENCFF766UJI, ENCFF769FVU, ENCFF779MMO, ENCFF781MKK, ENCFF781XUM, ENCFF782CNW, ENCFF790WIY, ENCFF794GVC, ENCFF798TFC, ENCFF801SNQ, ENCFF803ZUN, ENCFF806XNV, ENCFF812LAI, ENCFF816CPX, ENCFF818ZJQ, ENCFF830CBI, ENCFF834TQY, ENCFF840EFC, ENCFF849PKR, ENCFF851JLX, ENCFF859MTL, ENCFF860SGX, ENCFF863LMG, ENCFF866IHG, ENCFF867FTP, ENCFF869DVY, ENCFF872SFD, ENCFF877VSZ, ENCFF881YOK, ENCFF886UAF, ENCFF894COY, ENCFF916BSM, ENCFF921PGH, ENCFF927LFD, ENCFF931NMQ, ENCFF936DQW, ENCFF944RHJ, ENCFF952LUC, ENCFF953WBM, ENCFF956ZKG, ENCFF958BIE, ENCFF970WCD, ENCFF984QED, ENCFF985NHB, ENCFF994PPZ, ENCFF996AOW, ENCFF999ZYF chr9 92164166 92164167 + Predicted LTR|ERV1|LTR72_RN ENSMUSG00000032372.15, Plscr2 ENCFF567AFB, ENCFF862FYE, ENCFF906OAF, SRR5643192 chr9 95003739 95003740 + Annotated DNA|hAT-Tip100|Arthur1B ENSMUSG00000031129.10, Slc9a9 ENSMUST00000162329.2 chr9 95395273 95395274 - Predicted SINE|Alu|B1_Mus1 ENSMUSG00000032407.15, U2surp ENCFF114PSQ, ENCFF148XRK, ENCFF222GPK, ENCFF271OHB, ENCFF335ZSA, ENCFF408NBX, ENCFF654AEJ, ENCFF721BNO, ENCFF860XMD, ENCFF962OCF, ENCFF177SGB, ENCFF426ETE, ENCFF429ZEH, ENCFF765AQX, ENCFF499CDP, ENCFF749STK chr9 95436550 95436551 + Annotated SINE|MIR|MIRb ENSMUSG00000110827.2, Gm32281 ENSMUST00000213295.3 ENCFF001RTD, ENCFF001RTN chr9 95439514 95439556 + Predicted SINE|B4|ID_B1 ENSMUSG00000064225.7, Paqr9 DRR091689, DRR091690, DRR091692, DRR091697, SRR10697197, SRR10697198, SRR10697200, SRR10697201, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198223, SRR15198224, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR9080665, SRR9178976, SRR9178978, SRR9178980, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178990, SRR9178991, SRR9178992 chr9 95459782 95459783 - Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000120809.1, ENSMUSG00000120809 ENSMUST00000245917.1 chr9 96647615 96647655 + Annotated LTR|ERVL-MaLR|MTD ENSMUSG00000101581.7, C430002N11Rik ENSMUST00000189815.7, ENSMUST00000188819.7, ENSMUST00000189067.7, ENSMUST00000191375.7, ENSMUST00000190054.2, NR_102295.1, NR_102293.1, NR_102296.1, NR_102294.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDZ, ENCFF001NEC, ENCFF002ERW chr9 97157765 97157812 + Annotated LTR|ERVK|RLTR44B ENSMUSG00000120741.1, Gm33302 ENSMUST00000245996.1, ENSMUST00000245490.1, NR_168654.1, NR_168655.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDD, ENCFF001NEC, DRR091688, DRR091689, DRR091690, DRR091692, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, SRR10697195, SRR10697197, SRR10697198, SRR10697199, SRR10697203, SRR11428467, SRR11428468, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR5643190, SRR5643191, SRR5643201, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178983, SRR9178987, SRR9178991 chr9 97885472 97885499 + Annotated DNA|hAT-Charlie|MER5B ENSMUSG00000090255.8, 4921534H16Rik ENSMUST00000162370.8, ENSMUST00000162911.2, NR_110443.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR5643191, SRR5643192, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chr9 99180287 99180335 + Predicted LTR|ERVK|RLTR17B_Mm ENSMUSG00000056267.15, Cep70 ENCFF001NDA, ENCFF002EZU, ENCFF102AMK, ENCFF130KZZ, ENCFF138QRF, ENCFF138TOM, ENCFF196PBF, ENCFF262WAE, ENCFF332ZPO, ENCFF334RGJ, ENCFF352VWM, ENCFF575RUC, ENCFF667FDW, ENCFF707QJV, ENCFF883UYA, ENCFF884TJE, ENCFF907HVO, ENCFF023MKT, ENCFF065TCZ, ENCFF148XRK, ENCFF271OHB, ENCFF335ZSA, ENCFF487DYP, ENCFF533DWD, ENCFF572TOH, ENCFF647TTU, ENCFF694NRG, ENCFF744OEI, ENCFF831ISX, ENCFF967NOO, ENCFF107YGR, ENCFF163BDT, ENCFF277JGD, ENCFF297PPT, ENCFF781XUM, ENCFF812LAI, ENCFF517DCU, ENCFF525QIM, ENCFF803OIY, ENCFF854IBU chr9 99382505 99382529 - Predicted LINE|L1|L1MC4 ENSMUSG00000032468.12, Armc8 ENCFF074HUJ, ENCFF198NQV, ENCFF279BVM, ENCFF348VIH, ENCFF453XOG, ENCFF764TGO, ENCFF823PZU, ENCFF946AGD, ENCFF134PXJ, ENCFF210BVU, ENCFF420REU, ENCFF517BAY, ENCFF524FJG, ENCFF613YNK, ENCFF685GDB, ENCFF770WIT, ENCFF951PCM, ENCFF956RCJ, ENCFF964HGL chr9 99904328 99904354 + Annotated LINE|L1|L1M2 ENSMUSG00000101584.3, 4930519F24Rik ENSMUST00000185764.2, NR_040763.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR9080662, SRR9080663, SRR9080664, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chrX 100571208 100571209 + Annotated LTR|ERVK|MLTR31FA_MM ENSMUSG00000120836.1, ENSMUSG00000120836 ENSMUST00000246033.1 ENCFF001NCR, ENCFF001NDA, ENCFF001NDD, ENCFF002FAI, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chrX 100584367 100584406 + Predicted LINE|L2|L2 ENSMUSG00000031314.19, Taf1 ENCFF002DMZ, ENCFF040EEJ, ENCFF064PBF, ENCFF106GQS, ENCFF151QHP, ENCFF366BBB, ENCFF401HCS, ENCFF472YPG, ENCFF560YXX, ENCFF581WWO, ENCFF622NXP, ENCFF639RWJ, ENCFF671ERF, ENCFF672HUA, ENCFF902GVX, ENCFF934ULS, ENCFF951UXE, ENCFF993QUE, ENCFF008YSM, ENCFF039PJR, ENCFF045YRV, ENCFF065UBR, ENCFF087OKI, ENCFF098TCZ, ENCFF111MWQ, ENCFF127KHN, ENCFF175LCC, ENCFF197JAP, ENCFF198XFF, ENCFF257EYD, ENCFF260BJB, ENCFF277JGD, ENCFF302KQL, ENCFF305GPD, ENCFF334XFS, ENCFF335UNU, ENCFF383AJS, ENCFF386CRY, ENCFF411YXB, ENCFF468RDR, ENCFF486GBM, ENCFF507VMW, ENCFF518TUP, ENCFF572JDP, ENCFF584ZUK, ENCFF612KDP, ENCFF618SIR, ENCFF637GVH, ENCFF669PMR, ENCFF696TTO, ENCFF798TFC, ENCFF825JNK, ENCFF847HFJ, ENCFF910CTW, ENCFF955WXI, ENCFF971DTR chrX 101951080 101951108 - Predicted LINE|L1|Lx8 ENSMUSG00000031323.9, Dmrtc1a DRR091690, DRR091698, SRR11428468, SRR11428469, SRR15198221, SRR15198223, SRR15198227, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chrX 102070870 102070872 - Annotated LTR|ERVK|RMER17A ENSMUSG00000120909.1, Gm39529 ENSMUST00000246435.1, NR_166892.1, NR_166893.1 chrX 109678415 109678416 - Predicted LINE|L1|Lx2A ENSMUSG00000109088.3, Gm44593 SRR2089607, SRR2089610, SRR2089611, SRR2089615, SRR2089618, SRR2089648, SRR2089650 chrX 110144799 110144800 + Predicted LINE|L1|L1MdA_I ENSMUSG00000073001.5, Cylc1 SRR2089604, SRR2089648, SRR2089649, SRR2089650 chrX 110264599 110264600 - Predicted LINE|L1|Lx8 ENSMUSG00000025665.18, Rps6ka6 SRR2089649, SRR2089650, SRR2089651 chrX 119468509 119468510 + Predicted LINE|L1|L1_Mur1 ENSMUSG00000034755.19, Pcdh11x SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089609, SRR2089610, SRR2089611, SRR2089614, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chrX 12844112 12844121 + Annotated LTR|ERVL-MaLR|ORR1E ENSMUSG00000120303.1, ENSMUSG00000120303 ENSMUST00000243824.1, NR_153101.1 ENCFF001NCP, ENCFF001NCR, SRR15198219, SRR2040601, SRR2927113 chrX 132800934 132800970 - Predicted SINE|MIR|MIRb ENSMUSG00000067377.13, Tspan6 DRR091688, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142123, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198227, SRR2927111, SRR2927112, SRR2927113, SRR6904685, SRR9080664, SRR9080665, SRR9080666, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178987, SRR9178989, SRR9178991 chrX 134393910 134393911 + Predicted LINE|L1|L1Lx_III ENSMUSG00000054994.3, AV320801 SRR2089617, SRR2089630, SRR2089633 chrX 134499506 134499530 - Annotated LTR|ERVL|MT2C_Mm ENSMUSG00000031410.15, Nxf7 ENSMUST00000113163.8, ENSMUST00000150900.8, NM_130888.2, NM_001379677.1 ENCFF001NCP, ENCFF001NCR, ENCFF001NDD, ENCFF001RTF, ENCFF001RTJ, ENCFF426QFT chrX 135640871 135640965 - Predicted LINE|L1|L1MC5 ENSMUSG00000031422.17, Morf4l2 ENCFF051JGE, ENCFF083BIG, ENCFF105KSL, ENCFF106RGV, ENCFF133PEB, ENCFF147GLI, ENCFF151QHP, ENCFF196PBF, ENCFF212JFB, ENCFF251TMY, ENCFF273CJD, ENCFF273TLO, ENCFF283XKV, ENCFF287KDR, ENCFF307VAF, ENCFF313ERY, ENCFF321BMO, ENCFF348VIH, ENCFF379JPQ, ENCFF422ATU, ENCFF426QFT, ENCFF491XRO, ENCFF519IZA, ENCFF525POD, ENCFF540XSD, ENCFF552DRF, ENCFF581WWO, ENCFF589MBR, ENCFF645QUX, ENCFF667FDW, ENCFF672HUA, ENCFF691URX, ENCFF723KAG, ENCFF755IDE, ENCFF783MLO, ENCFF787LWL, ENCFF789LUC, ENCFF792XYG, ENCFF812CUD, ENCFF881TID, ENCFF881UBL, ENCFF884DLS, ENCFF906FNQ, ENCFF910ESY, ENCFF917RNE, ENCFF946AGD, ENCFF970JWC, ENCFF994BOT, ENCFF156YWS, ENCFF233IFH, ENCFF234LUQ, ENCFF271OHB, ENCFF308FEA, ENCFF326UXM, ENCFF348FTH, ENCFF374YTS, ENCFF377UGQ, ENCFF478KOR, ENCFF532UKS, ENCFF609ZVL, ENCFF636NES, ENCFF654AEJ, ENCFF818BAS, ENCFF822PGJ, ENCFF831ISX, ENCFF860XMD, ENCFF914YDJ, ENCFF962FIU, ENCFF967NOO, ENCFF028XDY, ENCFF035BBA, ENCFF039PJR, ENCFF060FGD, ENCFF068KDU, ENCFF077CYB, ENCFF089SWU, ENCFF090EUZ, ENCFF106GHS, ENCFF107YGR, ENCFF108JLQ, ENCFF111MWQ, ENCFF133PKQ, ENCFF137OYQ, ENCFF144EDQ, ENCFF149JXW, ENCFF151XBP, ENCFF155GUC, ENCFF162FTA, ENCFF166UTY, ENCFF179HJV, ENCFF184ALY, ENCFF192XJA, ENCFF194DAO, ENCFF198XFF, ENCFF209LBA, ENCFF209RRO, ENCFF223SMG, ENCFF247VEN, ENCFF256UWN, ENCFF260UQJ, ENCFF268YSJ, ENCFF271RFU, ENCFF272WGJ, ENCFF286GUQ, ENCFF286RSE, ENCFF301VMF, ENCFF305GPD, ENCFF324ITL, ENCFF335UNU, ENCFF350KYC, ENCFF366IEQ, ENCFF374VAZ, ENCFF404HLB, ENCFF417INY, ENCFF433QNW, ENCFF437ZSM, ENCFF439BEV, ENCFF462HZM, ENCFF468RDR, ENCFF478MHH, ENCFF484PQK, ENCFF485GFE, ENCFF513BRJ, ENCFF517BAY, ENCFF524PAV, ENCFF529LEZ, ENCFF536ZFC, ENCFF537DSI, ENCFF559QXN, ENCFF561CZI, ENCFF565FFU, ENCFF572SQL, ENCFF588JAU, ENCFF597BNT, ENCFF598BFX, ENCFF632HDE, ENCFF636SOT, ENCFF637GVH, ENCFF658NHH, ENCFF673BPE, ENCFF680OWA, ENCFF681EEO, ENCFF696QTS, ENCFF698XCB, ENCFF699SBZ, ENCFF746ZCS, ENCFF750IZJ, ENCFF753HNF, ENCFF754VQW, ENCFF758BKM, ENCFF758IOS, ENCFF758JNE, ENCFF765AQX, ENCFF775OZV, ENCFF781XUM, ENCFF786BUI, ENCFF791ZDR, ENCFF798TFC, ENCFF812LAI, ENCFF816CPX, ENCFF820JMO, ENCFF834TET, ENCFF840DKD, ENCFF856UMI, ENCFF866IHG, ENCFF875BUD, ENCFF894COY, ENCFF903KDM, ENCFF904KCQ, ENCFF906CJJ, ENCFF908MGO, ENCFF916BSM, ENCFF916JWW, ENCFF926IDV, ENCFF936DQW, ENCFF938CNS, ENCFF964HGL, ENCFF970PLY, ENCFF974KKD, ENCFF976SMI, ENCFF985NHB, ENCFF986DZE, ENCFF996AOW, ENCFF349AIG, ENCFF499CDP, ENCFF525QIM, ENCFF582WGH, ENCFF911OIZ, ENCFF932SOZ chrX 13581010 13581011 - Predicted LTR|ERVK|RMER12C ENSMUSG00000031012.18, Cask ENCFF450WAV, ENCFF647ICR, ENCFF906FNQ, ENCFF618PVF chrX 141080501 141080502 + Annotated LINE|L1|L1MdFanc_I NR_002883.1 chrX 143239577 143239579 + Annotated SINE|B4|ID_B1 ENSMUSG00000072934.11, Trpc5os ENSMUST00000155206.8, NM_001195579.1 DRR091688, SRR15198219, SRR15198220, SRR2927112, SRR2927113 chrX 146212187 146212188 - Annotated LINE|CR1|L3b ENSMUSG00000031289.11, Il13ra2 ENSMUST00000033646.9, NM_008356.4, NM_001306059.1 chrX 149737849 149737854 - Predicted LTR|ERVL-MaLR|MLT1M ENSMUSG00000025268.16, ENSMUSG00000081194.2, Maged2, Gm8424 ENCFF261ZZF, ENCFF391UFN, ENCFF429BQZ, ENCFF516BTG, ENCFF519YGA, ENCFF590LNP, ENCFF596QWT, ENCFF642YTY, ENCFF643XFK, ENCFF714CKE, ENCFF721ASG, ENCFF768ZCF, ENCFF782NPY, ENCFF803VZZ, ENCFF829RHM, ENCFF978EQI, ENCFF254YNR, ENCFF277QHC, ENCFF592WZB, ENCFF626KIV, ENCFF705HQV, ENCFF733LFV, ENCFF782WDV, ENCFF783KGQ, ENCFF888IIL chrX 151341014 151341015 - Predicted LINE|L1|L1_Mur2 ENSMUSG00000087569.2, Actb-ps1 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chrX 153932431 153932432 - Predicted LTR|ERV1|MLTR12 ENSMUSG00000045694.5, Gm4997 SRR2089610, SRR2089611, SRR2089615, SRR2089617, SRR2089622, SRR2089641, SRR2089650, SRR2089651 chrX 153932584 153932585 - Predicted LTR|ERV1|MLTR12 ENSMUSG00000045694.5, Gm4997 SRR2089603, SRR2089610, SRR2089611, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641, SRR2089645, SRR2089646, SRR2089647, SRR2089651 chrX 154062199 154062200 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000025287.16, Acot9 ENCFF304MIZ, ENCFF994BOT, ENCFF248XZC, ENCFF255XDN, ENCFF260BJB, ENCFF518TUP, ENCFF543GNI, ENCFF601JTS, ENCFF685GDB, ENCFF699SBZ, ENCFF861RRQ chrX 165290742 165290743 - Predicted DNA|hAT-Charlie|MER58D ENSMUSG00000051224.14, Tceanc ENCFF002ERW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF102BWR, ENCFF218HNK, ENCFF450WAV, ENCFF502ANK chrX 19013461 19013462 - Predicted LINE|L1|L1MdMus_II ENSMUSG00000073274.6, Gm14636 ENCFF023RRS, ENCFF283XKV, ENCFF082OML, ENCFF155GUC, ENCFF175LCC, ENCFF222MKT, ENCFF357AGP, ENCFF541HSQ, ENCFF661TOM, ENCFF735BVR, ENCFF932XKS chrX 20721742 20721743 + Predicted SINE|Alu|B1_Mus2 ENSMUSG00000001127.13, Araf ENCFF385GUJ, ENCFF823PZU, ENCFF013HYW, ENCFF003GJV, ENCFF082OML, ENCFF111MWQ, ENCFF254VIN, ENCFF374VAZ, ENCFF376PQU, ENCFF433QNW, ENCFF558UDY, ENCFF696VQM, ENCFF772QLP, ENCFF794MMU, ENCFF883APB, ENCFF896XAZ, ENCFF986DZE chrX 20798027 20798134 - Predicted SINE|Alu|B1F2 ENSMUSG00000001128.8, Cfp ENCFF002EZW, ENCFF002EZY, ENCFF082HKQ, ENCFF295SYY, ENCFF426QFT, ENCFF462ABU, ENCFF606EDP, ENCFF764ZUI, ENCFF787LWL, ENCFF794FBC, ENCFF982BLT, ENCFF134HVE, ENCFF173IVH, ENCFF364LFJ, ENCFF484HRX, ENCFF667SYQ, ENCFF683CWD, ENCFF686KMX, ENCFF712DGP, ENCFF775SSI, ENCFF804UQS, ENCFF838YLT, ENCFF840XYZ, ENCFF912MUD, ENCFF016CHX, ENCFF027GCQ, ENCFF030IFE, ENCFF065UBR, ENCFF077YZF, ENCFF078CCF, ENCFF098AYQ, ENCFF111MWQ, ENCFF118PQI, ENCFF144EDQ, ENCFF155GUC, ENCFF167GWU, ENCFF189JVE, ENCFF201IQS, ENCFF221ZQB, ENCFF255XDN, ENCFF297PPT, ENCFF307OHZ, ENCFF308WGP, ENCFF310HAL, ENCFF311MZV, ENCFF319YFJ, ENCFF328TJH, ENCFF335UNU, ENCFF350PHR, ENCFF353SEU, ENCFF358UHV, ENCFF386HCR, ENCFF403RPK, ENCFF414IHO, ENCFF422ZNC, ENCFF426ZCK, ENCFF462HZM, ENCFF479WHZ, ENCFF504PGI, ENCFF507VMW, ENCFF536ZFC, ENCFF561CZI, ENCFF581ZWM, ENCFF585CYT, ENCFF601JTS, ENCFF613YNK, ENCFF618PVF, ENCFF632HDE, ENCFF636SOT, ENCFF655KBW, ENCFF669PMR, ENCFF685GDB, ENCFF694EPZ, ENCFF696QTS, ENCFF696VQM, ENCFF711XWR, ENCFF742DJH, ENCFF755REI, ENCFF758IOS, ENCFF779MMO, ENCFF791ZDR, ENCFF810SCH, ENCFF814TTQ, ENCFF817NCH, ENCFF820JMO, ENCFF847IGW, ENCFF854LJN, ENCFF863ENS, ENCFF936DQW, ENCFF946LMX, ENCFF952FJN, ENCFF956RCJ, ENCFF974KKD, ENCFF986DZE, ENCFF996WVL, ENCFF160TQC, ENCFF344OJQ, ENCFF366CUG, ENCFF494ZWE, ENCFF517DCU, ENCFF720MPJ, ENCFF723MAR chrX 31788161 31788162 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000096194.3, Btbd35f2 ENCFF297BEX, ENCFF321BMO, ENCFF514BEA, ENCFF521UGJ, ENCFF841OXD, ENCFF080BTV, ENCFF095NMU, ENCFF163BDT, ENCFF371ZDG, ENCFF426ZCK, ENCFF464KYQ, ENCFF724VJN, ENCFF803ZUN, ENCFF916BSM chrX 3401083 3401084 + Predicted LINE|L1|Lx8 ENSMUSG00000082167.2, Gm14360 DRR091691, DRR091696, SRR15198226 chrX 36891617 36891680 + Predicted LTR|ERVK|RLTR16 ENSMUSG00000095180.11, Rhox5 ENSMUST00000184866.10, NM_008818.2 ENCFF001NDA, ENCFF001NDD, ENCFF001RTD, ENCFF089PFT, ENCFF521IDK, ENCFF696TCH, DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927112, SRR2927113, SRR5643192, SRR6338004, SRR6904684, SRR6904685, SRR9080662, SRR9080664, SRR9080666 chrX 37199783 37199784 - Annotated LTR|ERVL|RMER15 ENSMUSG00000071766.13, Rhox12 ENSMUST00000096453.12, NM_001025083.2 chrX 37314002 37314003 - Predicted DNA|TcMar-Tigger|Tigger20a ENSMUSG00000036502.15, Tmem255a ENCFF002FAC, ENCFF330FNX, ENCFF510LAE, ENCFF609KQB, ENCFF697AST, ENCFF319SDE, SRR5643192, SRR6904685 chrX 37675759 37675760 - Predicted LINE|L1|Lx9 ENSMUSG00000031095.16, Cul4b ENCFF002DNB, ENCFF002EZU, ENCFF002FAA, ENCFF994PPZ, SRR11428469, SRR9178983, SRR9178985 chrX 41148453 41148454 + Predicted SINE|Alu|PB1D7 ENSMUSG00000025860.16, Xiap ENCFF060JCS, ENCFF101BDM, ENCFF170XMM, ENCFF199ZDO, ENCFF270ERO, ENCFF304DLW, ENCFF315OOH, ENCFF364LFJ, ENCFF604SXL, ENCFF670FEL, ENCFF697AST, ENCFF737OUQ, ENCFF838YLT, ENCFF840XYZ, ENCFF855FCX, ENCFF923VUD, ENCFF939IUH, ENCFF952BCB, ENCFF962FIU, ENCFF160TQC, ENCFF319SDE, ENCFF366CUG, ENCFF446LMP, ENCFF641WPY, ENCFF715CAJ, ENCFF723MAR chrX 41149271 41149272 + Annotated LTR|ERVL-MaLR|ORR1A3 ENSMUSG00000025860.16, Xiap ENSMUST00000224454.2 ENCFF002FAA chrX 41182716 41182899 + Predicted SINE|ID|ID4 ENSMUSG00000025860.16, Xiap ENCFF083CUR, ENCFF086ZMV, ENCFF105KSL, ENCFF126RJS, ENCFF136POG, ENCFF147GLI, ENCFF151QHP, ENCFF160HKC, ENCFF198NQV, ENCFF262WAE, ENCFF264RIV, ENCFF273CJD, ENCFF330LWU, ENCFF349LIW, ENCFF358UFZ, ENCFF366BBB, ENCFF401HCS, ENCFF453XOG, ENCFF535YBP, ENCFF589MBR, ENCFF608NVM, ENCFF643VPC, ENCFF710DAI, ENCFF764TGO, ENCFF858CTQ, ENCFF910ESY, ENCFF960LQP, ENCFF979WZO, ENCFF982BLT, ENCFF994BOT, ENCFF027QGO, ENCFF039PJR, ENCFF045YRV, ENCFF065UBR, ENCFF066UDR, ENCFF068KDU, ENCFF078CCF, ENCFF080BTV, ENCFF089SWU, ENCFF118PQI, ENCFF136TYP, ENCFF140WZW, ENCFF142PTA, ENCFF151XBP, ENCFF163BDT, ENCFF167EHX, ENCFF175LCC, ENCFF179HJV, ENCFF220GKL, ENCFF229TCX, ENCFF247VEN, ENCFF261EQP, ENCFF297PPT, ENCFF310HAL, ENCFF310WDZ, ENCFF319YFJ, ENCFF331YYO, ENCFF343MZH, ENCFF374VAZ, ENCFF382VCK, ENCFF386HCR, ENCFF399TOF, ENCFF403RPK, ENCFF411YXB, ENCFF438ROC, ENCFF440IAL, ENCFF450CUC, ENCFF460VXC, ENCFF464KYQ, ENCFF468RDR, ENCFF484PQK, ENCFF486GBM, ENCFF504PGI, ENCFF513BRJ, ENCFF522KWW, ENCFF543GNI, ENCFF548HOL, ENCFF562MVN, ENCFF565DII, ENCFF572JDP, ENCFF584ZUK, ENCFF595NMM, ENCFF601JTS, ENCFF613SEJ, ENCFF618PVF, ENCFF618SIR, ENCFF637GVH, ENCFF640RWH, ENCFF651HEM, ENCFF657NUT, ENCFF663SPA, ENCFF668SQN, ENCFF669PMR, ENCFF673ZDG, ENCFF694EPZ, ENCFF696TTO, ENCFF698XCB, ENCFF699SBZ, ENCFF700IPC, ENCFF706BUS, ENCFF750IZJ, ENCFF754VQW, ENCFF758IOS, ENCFF758JNE, ENCFF759WDO, ENCFF770WIT, ENCFF814PHK, ENCFF840EFC, ENCFF848UMJ, ENCFF859MTL, ENCFF881DTW, ENCFF883APB, ENCFF885ZAO, ENCFF894COY, ENCFF903ULI, ENCFF904KCQ, ENCFF910CTW, ENCFF930JCE, ENCFF934QGX, ENCFF939UBM, ENCFF944RHJ, ENCFF946LMX, ENCFF953FGT, ENCFF974KKD, ENCFF994JUO chrX 4196966 4196967 + Predicted LINE|L1|Lx8 ENSMUSG00000085775.2, Gm14364 SRR15198217, SRR15198220, SRR15198221, SRR15198223, SRR15198227 chrX 45382342 45382343 - Predicted LTR|ERVL-MaLR|ORR1B1 ENSMUSG00000085157.2, 4930515L19Rik SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2927111, SRR2927112, SRR5643190, SRR9080663, SRR9080665 chrX 47201276 47201277 + Predicted SINE|B2|B2_Mm2 ENSMUSG00000037005.17, Xpnpep2 SRR2089634, SRR2089635, SRR2089636, SRR2089638, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chrX 47203541 47203542 + Predicted SINE|B4|RSINE1 ENSMUSG00000037005.17, Xpnpep2 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089640, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chrX 47224386 47224387 + Predicted SINE|MIR|MIR1_Amn ENSMUSG00000037005.17, Xpnpep2 SRR2089603, SRR2089607, SRR2089610, SRR2089611, SRR2089612, SRR2089616, SRR2089619, SRR2089620, SRR2089631, SRR2089638, SRR2089641, SRR2089644, SRR2089645, SRR2089648, SRR2089651 chrX 47247305 47247306 + Predicted SINE|MIR|MIRc ENSMUSG00000031101.7, Sash3 SRR2089648, SRR2089650, SRR2089651 chrX 47657639 47657640 - Predicted SINE|B4|RSINE1 ENSMUSG00000036916.14, Zfp280c SRR2089603, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089649, SRR2089650, SRR2089651 chrX 47657863 47657865 - Predicted SINE|B4|RSINE1 ENSMUSG00000036916.14, Zfp280c SRR2089603, SRR2089605, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089614, SRR2089615, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089648, SRR2089649 chrX 51664681 51664692 + Predicted SINE|MIR|MIR ENSMUSG00000055110.9, A630012P03Rik ENCFF022FSI, ENCFF064PBF, ENCFF091WMS, ENCFF106RGV, ENCFF125HRQ, ENCFF178ZVU, ENCFF214IUN, ENCFF262URV, ENCFF326TQL, ENCFF344LNZ, ENCFF363XWU, ENCFF404PYQ, ENCFF420RFN, ENCFF534DID, ENCFF641QXI, ENCFF670CXH, ENCFF802GAN, ENCFF828WIK, ENCFF865WQE, ENCFF951MOU, ENCFF989HJD, ENCFF991TPB, ENCFF068CQU, ENCFF116QKZ, ENCFF118YHP, ENCFF178ZXW, ENCFF194DAO, ENCFF199AAD, ENCFF222MKT, ENCFF235HER, ENCFF249LSC, ENCFF258WLS, ENCFF378TYU, ENCFF417OEG, ENCFF429TQT, ENCFF490ULA, ENCFF596INO, ENCFF619SKV, ENCFF693POR, ENCFF698WQO, ENCFF707HQI, ENCFF737VKP, ENCFF780UQU, ENCFF843WRN, ENCFF860SGX, ENCFF956ZKG chrX 51877179 51877180 + Predicted LTR|ERVL-MaLR|MLT1C2 ENSMUSG00000073207.2, Ccdc160 DRR091689, DRR091690, DRR091693, DRR091694, DRR091697, DRR091698, SRR10697198, SRR10697200, SRR11428468, SRR11428469, SRR11428470, SRR13142119, SRR15198219, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927113 chrX 52680089 52680097 - Predicted LTR|ERVL|RMER15 ENSMUSG00000067924.5, Rtl8b ENCFF084CWD, ENCFF251WZA, ENCFF269WEZ, ENCFF284AEN, ENCFF339MSB, ENCFF442FJC, ENCFF510LAE, ENCFF521NCL, ENCFF651SDJ, ENCFF670FEL, ENCFF694NRG, ENCFF728TXU, ENCFF754TOT, ENCFF826RUZ, ENCFF834VIK, ENCFF854KNE, ENCFF862FYE, ENCFF912MUD, ENCFF933MOZ, ENCFF943XKB, ENCFF975NCY, ENCFF454JTI, ENCFF827NYZ, ENCFF906OAF chrX 56288875 56288876 - Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000031133.13, Arhgef6 ENCFF002FAC, ENCFF002FAE, ENCFF048FGD, ENCFF106GQS, ENCFF221NAP, ENCFF327MSM, ENCFF570KYE, ENCFF836JVX, ENCFF885AJK, ENCFF888LGA, ENCFF197OUM, ENCFF334XFS, ENCFF407JTK, ENCFF689ZLL, ENCFF894SHM, ENCFF896XAZ, SRR6904684, SRR6904685 chrX 66501802 66501828 + Annotated LTR|ERVL|LTR101_Mam ENSMUSG00000086185.2, 1700036O09Rik ENSMUST00000136834.2 SRR10697197, SRR10697199, SRR10697203, SRR11428468, SRR13142118, SRR13142119, SRR13142120, SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198224, SRR2040601, SRR2927112, SRR2927113, SRR3178203, SRR3178206, SRR6904685, SRR9080662, SRR9080664, SRR9080665, SRR9178981, SRR9178991 chrX 70161088 70161089 + Predicted LTR|ERVK|RLTR51A_Mm ENSMUSG00000059401.15, Mamld1 ENCFF002EZY, ENCFF943XKB, SRR15198222, SRR15198224 chrX 71277159 71277160 + Predicted SINE|B2|B2_Mm1a ENSMUSG00000081471.2, Gm14735 ENCFF089PFT, ENCFF521IDK, ENCFF696TCH chrX 72273389 72273390 - Predicted LINE|L1|L1MA4 ENSMUSG00000058328.14, Xlr5a SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089631, SRR2089632, SRR2089633, SRR2089634, SRR2089641, SRR2089642, SRR2089643, SRR2089644, SRR2089645, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chrX 72275685 72275725 - Predicted LTR|ERVK|MLTR18D_MM ENSMUSG00000058328.14, Xlr5a SRR2089603, SRR2089604, SRR2089605, SRR2089606, SRR2089607, SRR2089608, SRR2089609, SRR2089610, SRR2089611, SRR2089612, SRR2089613, SRR2089614, SRR2089615, SRR2089616, SRR2089617, SRR2089618, SRR2089619, SRR2089620, SRR2089621, SRR2089622, SRR2089623, SRR2089629, SRR2089630, SRR2089633, SRR2089634, SRR2089635, SRR2089640, SRR2089641, SRR2089643, SRR2089644, SRR2089646, SRR2089647, SRR2089648, SRR2089649, SRR2089650, SRR2089651 chrX 73880599 73880621 + Predicted DNA|hAT-Ac|OldhAT1 ENSMUSG00000079531.2, Pwwp4d DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697197, SRR10697200, SRR10697201, SRR11428467, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR13142122, SRR13142123, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178983, SRR9178984, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chrX 77558846 77558847 - Predicted LTR|ERVK|IAP-d-int ENSMUSG00000047996.17, Prrg1 SRR2089604, SRR2089610, SRR2089617, SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chrX 77618981 77618982 - Predicted LTR|ERVL-MaLR|MTE-int ENSMUSG00000047996.17, Prrg1 SRR2089635, SRR2089636, SRR2089637, SRR2089638, SRR2089639, SRR2089640, SRR2089647, SRR2089649, SRR2089650, SRR2089651 chrX 78715040 78715041 - Annotated LTR|ERVK|RMER20C_Mm ENSMUSG00000046942.18, Mageb16 ENSMUST00000052283.7, NM_028025.1 ENCFF001NDA, ENCFF001NDD, ENCFF521IDK chrX 7915487 7915488 + Annotated LTR|ERVK|RMER19B ENSMUSG00000087193.9, Gm14820 ENSMUST00000126286.8 chrX 8053158 8053159 - Predicted LTR|Gypsy|MamGypLTR1c ENSMUSG00000031168.15, Ebp ENCFF002EZW, ENCFF002EZY, ENCFF002FAA, ENCFF002FAC, ENCFF002FAG, ENCFF885AJK, ENCFF334XFS, ENCFF641CYW, SRR5643199 chrX 84293283 84293299 + Annotated LTR|ERVL-MaLR|MTC ENSMUSG00000035491.6, Fthl17a ENSMUST00000048382.5, NM_028046.1 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR10697195, SRR10697196, SRR10697197, SRR10697198, SRR10697199, SRR10697200, SRR10697201, SRR10697202, SRR10697203, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142119, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113, SRR6338004, SRR9080662, SRR9080663, SRR9080664, SRR9080665, SRR9080666, SRR9178976, SRR9178977, SRR9178978, SRR9178979, SRR9178980, SRR9178981, SRR9178982, SRR9178983, SRR9178984, SRR9178985, SRR9178986, SRR9178987, SRR9178988, SRR9178989, SRR9178990, SRR9178991, SRR9178992 chrX 88696609 88696610 + Predicted LTR|LTR|MamRep605b ENSMUSG00000079513.2, 4932429P05Rik SRR15198219, SRR15198221, SRR15198223, SRR15198224 chrX 9123137 9123171 - Annotated SINE|ID|ID2 ENSMUSG00000079694.3, Gm14862 ENSMUST00000115553.3, NR_166878.1 ENCFF181RDS chrX 93684533 93684534 + Predicted LTR|ERVL-MaLR|ORR1D2 ENSMUSG00000071723.8, Gspt2 ENCFF510AYI, DRR091688, DRR091694, SRR13142119, SRR2927111, SRR2927113 chrX 93819282 93819283 - Annotated LTR|ERVL-MaLR|ORR1C2 ENSMUSG00000081418.2, Gm14830 ENSMUST00000121899.2 chrY 2782806 2782807 + Predicted LTR|ERVK|IAPEz-int ENSMUSG00000095852.8, Gm10256 ENCFF148XRK, ENCFF587VDB, ENCFF632LPV, ENCFF860XMD, ENCFF728WJB chrY 2840912 2840913 + Predicted LTR|ERVK|RMER17D ENSMUSG00000094658.8, ENSMUSG00000095852.8, Rbmy, Gm10256 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091699, SRR13142119, SRR15198217, SRR15198219, SRR15198221, SRR15198225, SRR15198226, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR2927113 chrY 34367666 34367667 + Predicted LTR|LTR|RLTR4_MM-int ENSMUSG00000101808.2, Gm29654 SRR15198219, SRR15198223, SRR15198224 chrY 3782325 3782326 + Predicted LTR|ERVK|RMER17D ENSMUSG00000096520.8, Gm3376 DRR091688, DRR091689, DRR091690, DRR091691, DRR091692, DRR091693, DRR091694, DRR091695, DRR091696, DRR091697, DRR091698, DRR091699, SRR11428467, SRR11428468, SRR11428469, SRR11428470, SRR13142118, SRR13142120, SRR13142121, SRR15198217, SRR15198218, SRR15198219, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198225, SRR15198226, SRR15198227, SRR15198228, SRR2040601, SRR2927111, SRR2927112, SRR9080664, SRR9080665, SRR9080666 chrY 5934909 5934910 + Predicted LTR|ERV1|MURVY-LTR ENSMUSG00000101291.2, Gm29194 SRR15198217, SRR15198218, SRR15198220, SRR15198221, SRR15198222, SRR15198223, SRR15198224, SRR15198227, SRR15198228 chrY 847749 847750 - Annotated LTR|ERVK|RLTR10D2 ENSMUSG00000101036.2, Gm28588 ENSMUST00000191581.2