Welcome to TE-TSS! A Database of Transposon-derived Promoters in Humans and Mice.

TE-TSS identifies both de novo transcription start sites (TSSs) and transposon (TE) - derived TSSs from RNA-seq datasets in human and mouse. Within TE-TSS, you can explore the utilization of TSSs across different cell types, and gain deeper insights into the evolution and functionality of TE-derived TSS regions.

Choose Species:

Input Gene/Transcript: (Case insensitive)

Input Location: (Optional)

Choose Cell Type: (Optional)

TSS Usage

In the browser, you can view TSS usage in different samples from various cell types and tissue types. See Demo.

TE-TSS BLAT Analysis

You can explore the BLAT results of TE-derived TSS regions in 13 species of mammals species. See Demo.

TE-TSS Motif Analysis

You can view motif binding sites in TE-derived TSS regions, exploring their potential functions. See Demo.

Download list:

⚬ human TSS

⚬ mouse TSS

⚬ human TE-derived TSS

⚬ mouse TE-derived TSS

Related Resource: Zhang-Lab Website